Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298200 | XP_003596834.1 | 100.000 | 107 | 0 | 0 | 1 | 107 | 1 | 107 | 7.03e-71 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298200 | sp|Q9SIK2|RS252_ARATH | 91.667 | 108 | 8 | 1 | 1 | 107 | 1 | 108 | 2.38e-52 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298200 | B7FGM7 | 100.000 | 107 | 0 | 0 | 1 | 107 | 1 | 107 | 3.36e-71 | 216 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0298200 | 0.865514 | 5.588761e-65 | -8.615850e-47 |
| Msa0002790 | Msa0298200 | 0.872790 | 2.426128e-67 | -8.615850e-47 |
| Msa0003780 | Msa0298200 | 0.814529 | 1.471148e-51 | -8.615850e-47 |
| Msa0022970 | Msa0298200 | 0.824888 | 6.324454e-54 | -8.615850e-47 |
| Msa0027260 | Msa0298200 | 0.833599 | 4.860940e-56 | -8.615850e-47 |
| Msa0031510 | Msa0298200 | 0.817756 | 2.795299e-52 | -8.615850e-47 |
| Msa0032780 | Msa0298200 | 0.815933 | 7.171599e-52 | -8.615850e-47 |
| Msa0032810 | Msa0298200 | 0.878363 | 2.984118e-69 | -8.615850e-47 |
| Msa0040690 | Msa0298200 | 0.819685 | 1.020147e-52 | -8.615850e-47 |
| Msa0042280 | Msa0298200 | 0.830317 | 3.143433e-55 | -8.615850e-47 |
| Msa0045730 | Msa0298200 | 0.873465 | 1.440061e-67 | -8.615850e-47 |
| Msa0046830 | Msa0298200 | 0.822772 | 1.981138e-53 | -8.615850e-47 |
| Msa0047160 | Msa0298200 | 0.806894 | 6.590028e-50 | -8.615850e-47 |
| Msa0048180 | Msa0298200 | 0.862923 | 3.591859e-64 | -8.615850e-47 |
| Msa0052610 | Msa0298200 | 0.806719 | 7.176930e-50 | -8.615850e-47 |
| Msa0052690 | Msa0298200 | 0.803020 | 4.254633e-49 | -8.615850e-47 |
| Msa0074030 | Msa0298200 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa0074320 | Msa0298200 | 0.802914 | 4.474678e-49 | -8.615850e-47 |
| Msa0076040 | Msa0298200 | 0.863315 | 2.718164e-64 | -8.615850e-47 |
| Msa0086750 | Msa0298200 | 0.827823 | 1.264192e-54 | -8.615850e-47 |
| Msa0097580 | Msa0298200 | 0.806161 | 9.410132e-50 | -8.615850e-47 |
| Msa0116130 | Msa0298200 | 0.884262 | 2.227923e-71 | -8.615850e-47 |
| Msa0116670 | Msa0298200 | 0.853654 | 2.071961e-61 | -8.615850e-47 |
| Msa0118710 | Msa0298200 | 0.870796 | 1.112930e-66 | -8.615850e-47 |
| Msa0126520 | Msa0298200 | 0.815496 | 8.973745e-52 | -8.615850e-47 |
| Msa0128860 | Msa0298200 | 0.872859 | 2.299516e-67 | -8.615850e-47 |
| Msa0133540 | Msa0298200 | 0.857069 | 2.097494e-62 | -8.615850e-47 |
| Msa0146340 | Msa0298200 | 0.824485 | 7.870304e-54 | -8.615850e-47 |
| Msa0163760 | Msa0298200 | 0.826433 | 2.720256e-54 | -8.615850e-47 |
| Msa0167480 | Msa0298200 | 0.868897 | 4.640105e-66 | -8.615850e-47 |
| Msa0173530 | Msa0298200 | 0.851099 | 1.106101e-60 | -8.615850e-47 |
| Msa0174730 | Msa0298200 | 0.870020 | 1.999561e-66 | -8.615850e-47 |
| Msa0180020 | Msa0298200 | 0.850745 | 1.391686e-60 | -8.615850e-47 |
| Msa0181490 | Msa0298200 | 0.846980 | 1.544521e-59 | -8.615850e-47 |
| Msa0181610 | Msa0298200 | 0.866791 | 2.202138e-65 | -8.615850e-47 |
| Msa0187690 | Msa0298200 | 0.810588 | 1.069630e-50 | -8.615850e-47 |
| Msa0187930 | Msa0298200 | 0.880434 | 5.507269e-70 | -8.615850e-47 |
| Msa0188350 | Msa0298200 | 0.821713 | 3.488373e-53 | -8.615850e-47 |
| Msa0189700 | Msa0298200 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0192230 | Msa0298200 | 0.810078 | 1.378511e-50 | -8.615850e-47 |
| Msa0194540 | Msa0298200 | 0.873385 | 1.532122e-67 | -8.615850e-47 |
| Msa0197980 | Msa0298200 | 0.809423 | 1.906236e-50 | -8.615850e-47 |
| Msa0199880 | Msa0298200 | 0.806788 | 6.940061e-50 | -8.615850e-47 |
| Msa0202020 | Msa0298200 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0210360 | Msa0298200 | 0.805389 | 1.367017e-49 | -8.615850e-47 |
| Msa0218830 | Msa0298200 | 0.864892 | 8.767779e-65 | -8.615850e-47 |
| Msa0219120 | Msa0298200 | 0.987905 | 5.611450e-172 | -8.615850e-47 |
| Msa0221030 | Msa0298200 | 0.841305 | 5.151738e-58 | -8.615850e-47 |
| Msa0224560 | Msa0298200 | 0.846787 | 1.743902e-59 | -8.615850e-47 |
| Msa0226460 | Msa0298200 | 0.802412 | 5.678730e-49 | -8.615850e-47 |
| Msa0230490 | Msa0298200 | 0.884018 | 2.743292e-71 | -8.615850e-47 |
| Msa0230520 | Msa0298200 | 0.833130 | 6.362280e-56 | -8.615850e-47 |
| Msa0231100 | Msa0298200 | 0.859950 | 2.901270e-63 | -8.615850e-47 |
| Msa0231710 | Msa0298200 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0244780 | Msa0298200 | 0.885156 | 1.036109e-71 | -8.615850e-47 |
| Msa0258850 | Msa0298200 | 0.996942 | 1.779775e-234 | -8.615850e-47 |
| Msa0262480 | Msa0298200 | 0.875548 | 2.825279e-68 | -8.615850e-47 |
| Msa0264010 | Msa0298200 | 0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0268130 | Msa0298200 | 0.868075 | 8.546685e-66 | -8.615850e-47 |
| Msa0280430 | Msa0298200 | 0.810723 | 1.000507e-50 | -8.615850e-47 |
| Msa0283390 | Msa0298200 | 0.808642 | 2.801707e-50 | -8.615850e-47 |
| Msa0289580 | Msa0298200 | 0.868379 | 6.820931e-66 | -8.615850e-47 |
| Msa0289610 | Msa0298200 | 0.877578 | 5.615117e-69 | -8.615850e-47 |
| Msa0296250 | Msa0298200 | 0.849723 | 2.692826e-60 | -8.615850e-47 |
| Msa0298200 | Msa0298990 | 0.876534 | 1.293951e-68 | -8.615850e-47 |
| Msa0298200 | Msa0300350 | 0.850083 | 2.135365e-60 | -8.615850e-47 |
| Msa0298200 | Msa0304590 | 0.819254 | 1.279068e-52 | -8.615850e-47 |
| Msa0298200 | Msa0304660 | 0.816253 | 6.083577e-52 | -8.615850e-47 |
| Msa0298200 | Msa0306690 | 0.854500 | 1.181100e-61 | -8.615850e-47 |
| Msa0298200 | Msa0307850 | 0.806143 | 9.490908e-50 | -8.615850e-47 |
| Msa0298200 | Msa0310080 | 0.806374 | 8.487034e-50 | -8.615850e-47 |
| Msa0298200 | Msa0317910 | 0.847810 | 9.136794e-60 | -8.615850e-47 |
| Msa0298200 | Msa0327300 | 0.873053 | 1.980328e-67 | -8.615850e-47 |
| Msa0298200 | Msa0327330 | 0.843820 | 1.107672e-58 | -8.615850e-47 |
| Msa0298200 | Msa0331700 | 0.818093 | 2.346471e-52 | -8.615850e-47 |
| Msa0298200 | Msa0332640 | 0.827875 | 1.228560e-54 | -8.615850e-47 |
| Msa0298200 | Msa0335840 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0298200 | Msa0336010 | 0.905677 | 3.334505e-80 | -8.615850e-47 |
| Msa0298200 | Msa0337670 | 0.821512 | 3.881188e-53 | -8.615850e-47 |
| Msa0298200 | Msa0348830 | 0.898772 | 3.821367e-77 | -8.615850e-47 |
| Msa0298200 | Msa0359040 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa0298200 | Msa0369450 | 0.822918 | 1.831768e-53 | -8.615850e-47 |
| Msa0298200 | Msa0393370 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0298200 | Msa0423750 | 0.848501 | 5.887215e-60 | -8.615850e-47 |
| Msa0298200 | Msa0427150 | 0.813667 | 2.279132e-51 | -8.615850e-47 |
| Msa0298200 | Msa0443390 | 0.889776 | 1.788694e-73 | -8.615850e-47 |
| Msa0298200 | Msa0481850 | 0.871979 | 4.522585e-67 | -8.615850e-47 |
| Msa0298200 | Msa0483110 | 0.866953 | 1.954464e-65 | -8.615850e-47 |
| Msa0298200 | Msa0490820 | 0.841534 | 4.484065e-58 | -8.615850e-47 |
| Msa0298200 | Msa0521050 | 0.805908 | 1.063653e-49 | -8.615850e-47 |
| Msa0298200 | Msa0526540 | 0.907926 | 2.986122e-81 | -8.615850e-47 |
| Msa0298200 | Msa0527150 | 0.881501 | 2.278060e-70 | -8.615850e-47 |
| Msa0298200 | Msa0531650 | 0.862937 | 3.556661e-64 | -8.615850e-47 |
| Msa0298200 | Msa0534750 | 0.882347 | 1.124689e-70 | -8.615850e-47 |
| Msa0298200 | Msa0561430 | 0.808955 | 2.400890e-50 | -8.615850e-47 |
| Msa0298200 | Msa0571920 | 0.864661 | 1.035361e-64 | -8.615850e-47 |
| Msa0298200 | Msa0576940 | 0.908021 | 2.694723e-81 | -8.615850e-47 |
| Msa0298200 | Msa0581070 | 0.837514 | 4.970056e-57 | -8.615850e-47 |
| Msa0298200 | Msa0584260 | 0.822817 | 1.933428e-53 | -8.615850e-47 |
| Msa0298200 | Msa0588360 | 0.821312 | 4.317065e-53 | -8.615850e-47 |
| Msa0298200 | Msa0590940 | 0.855224 | 7.281049e-62 | -8.615850e-47 |
| Msa0298200 | Msa0603320 | 0.827327 | 1.662966e-54 | -8.615850e-47 |
| Msa0298200 | Msa0604960 | 0.803751 | 3.001328e-49 | -8.615850e-47 |
| Msa0298200 | Msa0615440 | 0.821781 | 3.364737e-53 | -8.615850e-47 |
| Msa0298200 | Msa0615580 | 0.873624 | 1.273327e-67 | -8.615850e-47 |
| Msa0298200 | Msa0620990 | 0.833892 | 4.108079e-56 | -8.615850e-47 |
| Msa0298200 | Msa0621950 | 0.819029 | 1.439469e-52 | -8.615850e-47 |
| Msa0298200 | Msa0622750 | 0.851564 | 8.174446e-61 | -8.615850e-47 |
| Msa0298200 | Msa0623200 | 0.875117 | 3.966003e-68 | -8.615850e-47 |
| Msa0298200 | Msa0631250 | 0.816541 | 5.243430e-52 | -8.615850e-47 |
| Msa0298200 | Msa0654870 | 0.825325 | 4.985726e-54 | -8.615850e-47 |
| Msa0298200 | Msa0659030 | 0.815982 | 6.992836e-52 | -8.615850e-47 |
| Msa0298200 | Msa0666230 | 0.873767 | 1.139007e-67 | -8.615850e-47 |
| Msa0298200 | Msa0669520 | 0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa0298200 | Msa0683660 | 0.803352 | 3.632111e-49 | -8.615850e-47 |
| Msa0298200 | Msa0698490 | 0.819291 | 1.254799e-52 | -8.615850e-47 |
| Msa0298200 | Msa0698660 | 0.819308 | 1.243247e-52 | -8.615850e-47 |
| Msa0298200 | Msa0698780 | 0.819655 | 1.036489e-52 | -8.615850e-47 |
| Msa0298200 | Msa0705000 | 0.826715 | 2.329840e-54 | -8.615850e-47 |
| Msa0298200 | Msa0705040 | 0.832502 | 9.112330e-56 | -8.615850e-47 |
| Msa0298200 | Msa0706500 | 0.830963 | 2.183732e-55 | -8.615850e-47 |
| Msa0298200 | Msa0709780 | 0.808411 | 3.137792e-50 | -8.615850e-47 |
| Msa0298200 | Msa0712610 | 0.855761 | 5.079293e-62 | -8.615850e-47 |
| Msa0298200 | Msa0729200 | 0.876978 | 9.084268e-69 | -8.615850e-47 |
| Msa0298200 | Msa0738100 | 0.858257 | 9.327433e-63 | -8.615850e-47 |
| Msa0298200 | Msa0752910 | 0.823995 | 1.025914e-53 | -8.615850e-47 |
| Msa0298200 | Msa0766080 | 0.814564 | 1.444951e-51 | -8.615850e-47 |
| Msa0298200 | Msa0769590 | 0.878103 | 3.679640e-69 | -8.615850e-47 |
| Msa0298200 | Msa0781080 | 0.862368 | 5.325918e-64 | -8.615850e-47 |
| Msa0298200 | Msa0785130 | 0.898124 | 7.214505e-77 | -8.615850e-47 |
| Msa0298200 | Msa0789930 | 0.817891 | 2.605877e-52 | -8.615850e-47 |
| Msa0298200 | Msa0790400 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0298200 | Msa0792420 | 0.821148 | 4.709110e-53 | -8.615850e-47 |
| Msa0298200 | Msa0806880 | 0.879509 | 1.175892e-69 | -8.615850e-47 |
| Msa0298200 | Msa0808800 | 0.839402 | 1.619397e-57 | -8.615850e-47 |
| Msa0298200 | Msa0817540 | 0.881805 | 1.768465e-70 | -8.615850e-47 |
| Msa0298200 | Msa0827380 | 0.807925 | 3.982774e-50 | -8.615850e-47 |
| Msa0298200 | Msa0845550 | 0.817620 | 3.000142e-52 | -8.615850e-47 |
| Msa0298200 | Msa0867060 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0298200 | Msa0881290 | 0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0298200 | Msa0888810 | 0.814002 | 1.922889e-51 | -8.615850e-47 |
| Msa0298200 | Msa0945480 | 0.872718 | 2.564059e-67 | -8.615850e-47 |
| Msa0298200 | Msa0953310 | 0.814583 | 1.431106e-51 | -8.615850e-47 |
| Msa0298200 | Msa0963020 | 0.802722 | 4.902188e-49 | -8.615850e-47 |
| Msa0298200 | Msa1006840 | 0.830548 | 2.760866e-55 | -8.615850e-47 |
| Msa0298200 | Msa1010310 | 0.824202 | 9.169066e-54 | -8.615850e-47 |
| Msa0298200 | Msa1012740 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa0298200 | Msa1019240 | 0.888529 | 5.444857e-73 | -8.615850e-47 |
| Msa0298200 | Msa1019260 | 0.889410 | 2.484522e-73 | -8.615850e-47 |
| Msa0298200 | Msa1039520 | 0.824039 | 1.001770e-53 | -8.615850e-47 |
| Msa0298200 | Msa1043690 | 0.813425 | 2.576067e-51 | -8.615850e-47 |
| Msa0298200 | Msa1072710 | 0.854529 | 1.158523e-61 | -8.615850e-47 |
| Msa0298200 | Msa1078870 | 0.829602 | 4.696706e-55 | -8.615850e-47 |
| Msa0298200 | Msa1078980 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0298200 | Msa1080350 | 0.879882 | 8.668058e-70 | -8.615850e-47 |
| Msa0298200 | Msa1088490 | 0.835937 | 1.254544e-56 | -8.615850e-47 |
| Msa0298200 | Msa1094380 | 0.830437 | 2.938715e-55 | -8.615850e-47 |
| Msa0298200 | Msa1104140 | 0.859239 | 4.744894e-63 | -8.615850e-47 |
| Msa0298200 | Msa1104210 | 0.886549 | 3.104099e-72 | -8.615850e-47 |
| Msa0298200 | Msa1117550 | 0.801624 | 8.246604e-49 | -8.615850e-47 |
| Msa0298200 | Msa1125860 | 0.880518 | 5.139715e-70 | -8.615850e-47 |
| Msa0298200 | Msa1126060 | 0.876946 | 9.315582e-69 | -8.615850e-47 |
| Msa0298200 | Msa1126470 | 0.801235 | 9.908923e-49 | -8.615850e-47 |
| Msa0298200 | Msa1126510 | 0.857264 | 1.837404e-62 | -8.615850e-47 |
| Msa0298200 | Msa1126770 | 0.809723 | 1.643583e-50 | -8.615850e-47 |
| Msa0298200 | Msa1126830 | 0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0298200 | Msa1131560 | 0.804161 | 2.467355e-49 | -8.615850e-47 |
| Msa0298200 | Msa1135890 | 0.816126 | 6.495158e-52 | -8.615850e-47 |
| Msa0298200 | Msa1143510 | 0.806958 | 6.387773e-50 | -8.615850e-47 |
| Msa0298200 | Msa1165780 | 0.815481 | 9.044307e-52 | -8.615850e-47 |
| Msa0298200 | Msa1166860 | 0.855877 | 4.695806e-62 | -8.615850e-47 |
| Msa0298200 | Msa1166870 | 0.877918 | 4.272299e-69 | -8.615850e-47 |
| Msa0298200 | Msa1181830 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
| Msa0298200 | Msa1181850 | 0.817789 | 2.747808e-52 | -8.615850e-47 |
| Msa0298200 | Msa1181860 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0298200 | Msa1183450 | 0.817820 | 2.704977e-52 | -8.615850e-47 |
| Msa0298200 | Msa1184370 | 0.802760 | 4.813500e-49 | -8.615850e-47 |
| Msa0298200 | Msa1208020 | 0.811830 | 5.751974e-51 | -8.615850e-47 |
| Msa0298200 | Msa1211770 | 0.833386 | 5.493234e-56 | -8.615850e-47 |
| Msa0298200 | Msa1215820 | 0.864171 | 1.473132e-64 | -8.615850e-47 |
| Msa0298200 | Msa1227690 | 0.826544 | 2.559714e-54 | -8.615850e-47 |
| Msa0298200 | Msa1230580 | 0.859806 | 3.205849e-63 | -8.615850e-47 |
| Msa0298200 | Msa1241190 | 0.835497 | 1.621067e-56 | -8.615850e-47 |
| Msa0298200 | Msa1256840 | 0.814699 | 1.349016e-51 | -8.615850e-47 |
| Msa0298200 | Msa1257510 | 0.826007 | 3.435250e-54 | -8.615850e-47 |
| Msa0298200 | Msa1258710 | 0.820928 | 5.293555e-53 | -8.615850e-47 |
| Msa0298200 | Msa1262890 | 0.830920 | 2.237202e-55 | -8.615850e-47 |
| Msa0298200 | Msa1265630 | 0.806657 | 7.395840e-50 | -8.615850e-47 |
| Msa0298200 | Msa1266060 | 0.834590 | 2.744186e-56 | -8.615850e-47 |
| Msa0298200 | Msa1273340 | 0.833171 | 6.215673e-56 | -8.615850e-47 |
| Msa0298200 | Msa1299590 | 0.812241 | 4.679960e-51 | -8.615850e-47 |
| Msa0298200 | Msa1305050 | 0.814904 | 1.214841e-51 | -8.615850e-47 |
| Msa0298200 | Msa1316680 | 0.864357 | 1.288572e-64 | -8.615850e-47 |
| Msa0298200 | Msa1321790 | 0.817185 | 3.759929e-52 | -8.615850e-47 |
| Msa0298200 | Msa1331710 | 0.811746 | 6.000535e-51 | -8.615850e-47 |
| Msa0298200 | Msa1332250 | 0.831852 | 1.319397e-55 | -8.615850e-47 |
| Msa0298200 | Msa1338190 | 0.845324 | 4.361393e-59 | -8.615850e-47 |
| Msa0298200 | Msa1343260 | 0.812035 | 5.191475e-51 | -8.615850e-47 |
| Msa0298200 | Msa1349570 | 0.898221 | 6.562371e-77 | -8.615850e-47 |
| Msa0298200 | Msa1356790 | 0.851832 | 6.861859e-61 | -8.615850e-47 |
| Msa0298200 | Msa1362790 | 0.880421 | 5.567135e-70 | -8.615850e-47 |
| Msa0298200 | Msa1363330 | 0.905733 | 3.140165e-80 | -8.615850e-47 |
| Msa0298200 | Msa1366180 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
| Msa0298200 | Msa1369190 | 0.882075 | 1.412187e-70 | -8.615850e-47 |
| Msa0298200 | Msa1374120 | 0.808277 | 3.352442e-50 | -8.615850e-47 |
| Msa0298200 | Msa1379760 | 0.875787 | 2.338814e-68 | -8.615850e-47 |
| Msa0298200 | Msa1386600 | 0.904932 | 7.311570e-80 | -8.615850e-47 |
| Msa0298200 | Msa1387410 | 0.811146 | 8.101885e-51 | -8.615850e-47 |
| Msa0298200 | Msa1392590 | 0.800474 | 1.416865e-48 | -8.615850e-47 |
| Msa0298200 | Msa1399530 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0298200 | Msa1406080 | 0.830237 | 3.289232e-55 | -8.615850e-47 |
| Msa0298200 | Msa1410440 | 0.834230 | 3.379398e-56 | -8.615850e-47 |
| Msa0298200 | Msa1413260 | 0.812348 | 4.434777e-51 | -8.615850e-47 |
| Msa0298200 | Msa1413500 | 0.874098 | 8.802570e-68 | -8.615850e-47 |
| Msa0298200 | Msa1425670 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
| Msa0298200 | Msa1426120 | 0.837395 | 5.330457e-57 | -8.615850e-47 |
| Msa0298200 | Msa1426370 | 0.829129 | 6.116212e-55 | -8.615850e-47 |
| Msa0298200 | Msa1426490 | 0.880033 | 7.657766e-70 | -8.615850e-47 |
| Msa0298200 | Msa1427560 | 0.888226 | 7.125308e-73 | -8.615850e-47 |
| Msa0298200 | Msa1432700 | 0.813326 | 2.708925e-51 | -8.615850e-47 |
| Msa0298200 | Msa1433310 | 0.813769 | 2.164251e-51 | -8.615850e-47 |
| Msa0298200 | Msa1442850 | 0.819164 | 1.340720e-52 | -8.615850e-47 |
| Msa0298200 | Msa1443300 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0298200 | Msa1448690 | 0.872625 | 2.753426e-67 | -8.615850e-47 |
| Msa0298200 | Msa1450280 | 0.886992 | 2.108764e-72 | -8.615850e-47 |
| Msa0298200 | Msa1455950 | 0.826646 | 2.419891e-54 | -8.615850e-47 |
| Msa0298200 | Msa1456050 | 0.850409 | 1.729886e-60 | -8.615850e-47 |
| Msa0298200 | Msa1462860 | 0.837630 | 4.642106e-57 | -8.615850e-47 |
| Msa0298200 | Msa1465260 | 0.851593 | 8.021530e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298200 | MtrunA17_Chr2g0321571 | 100.000 | 107 | 0 | 0 | 1 | 107 | 1 | 107 | 6.46e-75 | 216 |
| Msa0298200 | MtrunA17_Chr4g0035271 | 99.065 | 107 | 1 | 0 | 1 | 107 | 1 | 107 | 2.02e-74 | 215 |
| Msa0298200 | MtrunA17_Chr6g0455051 | 75.556 | 45 | 2 | 1 | 26 | 70 | 6 | 41 | 1.05e-16 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298200 | AT2G21580.1 | 91.667 | 108 | 8 | 1 | 1 | 107 | 1 | 108 | 2.42e-53 | 162 |
| Msa0298200 | AT4G39200.1 | 88.889 | 108 | 11 | 1 | 1 | 107 | 1 | 108 | 9.22e-52 | 158 |
| Msa0298200 | AT2G21580.2 | 87.963 | 108 | 11 | 2 | 1 | 107 | 1 | 107 | 1.09e-51 | 158 |
| Msa0298200 | AT4G39200.2 | 87.037 | 108 | 12 | 2 | 1 | 107 | 1 | 107 | 4.24e-50 | 154 |
| Msa0298200 | AT4G34555.1 | 88.785 | 107 | 11 | 1 | 1 | 106 | 1 | 107 | 9.74e-50 | 153 |
| Msa0298200 | AT2G16360.1 | 85.714 | 105 | 14 | 1 | 2 | 105 | 2 | 106 | 3.04e-46 | 144 |
Find 38 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAGTGATGAGTTTGTATT+TGG | 0.207961 | 2_3:-52124956 | None:intergenic |
| TGCTTGCCGCAGAGAAGATT+TGG | 0.313854 | 2_3:-52124652 | None:intergenic |
| GAAAGCAAAAGAAGAAGAAA+TGG | 0.344636 | 2_3:+52124851 | Msa0298200:CDS |
| GGGGTTGGTGGTTACCATTA+GGG | 0.358777 | 2_3:-52124691 | None:intergenic |
| CAGTCCTCTCTGATCGTCTC+AGG | 0.361688 | 2_3:+52124980 | Msa0298200:CDS |
| CGCAGAGAAGATTTGGAAGA+AGG | 0.369919 | 2_3:-52124645 | None:intergenic |
| TGATGGCAAGAGGATTGATT+AGG | 0.387796 | 2_3:+52125124 | Msa0298200:CDS |
| TCATCAAAGCCGGCGAAATC+AGG | 0.410202 | 2_3:+52124823 | Msa0298200:CDS |
| GGTGGTGGTGCTGCCTTCTT+CGG | 0.414824 | 2_3:-52124799 | None:intergenic |
| TCGTGCAATCAGAGATTTGA+TGG | 0.416147 | 2_3:+52125107 | Msa0298200:CDS |
| TCATCAACTCCAAACCCTAA+TGG | 0.421313 | 2_3:+52124677 | Msa0298200:exon |
| TGGTGGTTACCATTAGGGTT+TGG | 0.424277 | 2_3:-52124686 | None:intergenic |
| TGAAACCGCCTATGTATTAG+TGG | 0.440250 | 2_3:-52125187 | None:intergenic |
| CTAATACATAGGCGGTTTCA+AGG | 0.473470 | 2_3:+52125190 | Msa0298200:exon |
| AACATGGTCTTGTTTGATCA+AGG | 0.477202 | 2_3:+52124904 | Msa0298200:CDS |
| CAAAGGTAAACAAAAGGAAA+AGG | 0.503611 | 2_3:+52124876 | Msa0298200:CDS |
| TTCAGTGAGAAGCTTATCAT+AGG | 0.513766 | 2_3:-52124929 | None:intergenic |
| GATTTCGCCGGCTTTGATGA+CGG | 0.516878 | 2_3:-52124820 | None:intergenic |
| ATGGAGCAAAGGTAAACAAA+AGG | 0.525529 | 2_3:+52124870 | Msa0298200:CDS |
| ACCACCACCGTCATCAAAGC+CGG | 0.527384 | 2_3:+52124813 | Msa0298200:CDS |
| CACTAGAGCCACTAATACAT+AGG | 0.531061 | 2_3:+52125179 | Msa0298200:CDS |
| TTTGTTGTAGGCACCGAAGA+AGG | 0.534954 | 2_3:+52124786 | Msa0298200:intron |
| GGAGTGATGAGTTTGTATTT+GGG | 0.540872 | 2_3:-52124955 | None:intergenic |
| GCAGAGAAGATTTGGAAGAA+GGG | 0.551616 | 2_3:-52124644 | None:intergenic |
| ATCAGAGATTTGATGGCAAG+AGG | 0.560553 | 2_3:+52125114 | Msa0298200:CDS |
| TTTCCTCCTCCTGATTTCGC+CGG | 0.569055 | 2_3:-52124832 | None:intergenic |
| GCCGGCTTTGATGACGGTGG+TGG | 0.569126 | 2_3:-52124814 | None:intergenic |
| AGACGATCAGAGAGGACTGA+AGG | 0.570313 | 2_3:-52124976 | None:intergenic |
| GGCAAGAGGATTGATTAGGT+TGG | 0.587429 | 2_3:+52125128 | Msa0298200:CDS |
| AGTCCTCTCTGATCGTCTCA+GGG | 0.592148 | 2_3:+52124981 | Msa0298200:CDS |
| AAGAAGAAGAAATGGAGCAA+AGG | 0.611863 | 2_3:+52124859 | Msa0298200:CDS |
| AAGCCGGCGAAATCAGGAGG+AGG | 0.614520 | 2_3:+52124829 | Msa0298200:CDS |
| TCAAAGCCGGCGAAATCAGG+AGG | 0.640955 | 2_3:+52124826 | Msa0298200:CDS |
| AAAGGAAAAGGTTAACAACA+TGG | 0.683005 | 2_3:+52124888 | Msa0298200:CDS |
| CTTCTTCCAAATCTTCTCTG+CGG | 0.690277 | 2_3:+52124646 | Msa0298200:five_prime_UTR |
| TTCGCCGGCTTTGATGACGG+TGG | 0.725481 | 2_3:-52124817 | None:intergenic |
| TAGAGCCACTAATACATAGG+CGG | 0.728751 | 2_3:+52125182 | Msa0298200:exon |
| ATACCCTGAGACGATCAGAG+AGG | 0.757534 | 2_3:-52124984 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTGTTTTTAATTTTATTATG+AGG | + | chr2_3:52125212-52125231 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | TATGTTTACATTATTGTTTT+TGG | + | chr2_3:52125339-52125358 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | ATGTTTACATTATTGTTTTT+GGG | + | chr2_3:52125340-52125359 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | TTGTATAATTGATTTGTTTT+AGG | + | chr2_3:52125367-52125386 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | GTGTTTTTAATTTTATTATG+AGG | + | chr2_3:52125212-52125231 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | TATGTTTACATTATTGTTTT+TGG | + | chr2_3:52125339-52125358 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | ATGTTTACATTATTGTTTTT+GGG | + | chr2_3:52125340-52125359 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | TTGTATAATTGATTTGTTTT+AGG | + | chr2_3:52125367-52125386 | Msa0298200:three_prime_UTR | 15.0% |
| !!! | TTGTAATGTTTTCAGATTAA+TGG | + | chr2_3:52125072-52125091 | Msa0298200:intron | 20.0% |
| !!! | TTGATTTTACTCTAAAGTTT+AGG | + | chr2_3:52125402-52125421 | Msa0298200:three_prime_UTR | 20.0% |
| !!! | TTGTAATGTTTTCAGATTAA+TGG | + | chr2_3:52125072-52125091 | Msa0298200:intron | 20.0% |
| !!! | TTGATTTTACTCTAAAGTTT+AGG | + | chr2_3:52125402-52125421 | Msa0298200:three_prime_UTR | 20.0% |
| !!! | TTTTCAGATTAATGGATCTT+TGG | + | chr2_3:52125080-52125099 | Msa0298200:intron | 25.0% |
| !! | TTTTATTATGAGGATGTGTT+TGG | + | chr2_3:52125222-52125241 | Msa0298200:three_prime_UTR | 25.0% |
| !!! | TTTTCAGATTAATGGATCTT+TGG | + | chr2_3:52125080-52125099 | Msa0298200:intron | 25.0% |
| !! | TTTTATTATGAGGATGTGTT+TGG | + | chr2_3:52125222-52125241 | Msa0298200:three_prime_UTR | 25.0% |
| !! | GAATTTGATGATGGAAATTG+GGG | - | chr2_3:52124713-52124732 | None:intergenic | 30.0% |
| !! | GGAATTTGATGATGGAAATT+GGG | - | chr2_3:52124714-52124733 | None:intergenic | 30.0% |
| !! | AGGAATTTGATGATGGAAAT+TGG | - | chr2_3:52124715-52124734 | None:intergenic | 30.0% |
| TAAGGAAAGGAATTTGATGA+TGG | - | chr2_3:52124722-52124741 | None:intergenic | 30.0% | |
| !! | ACTTCCATTTTCTTTGTTGT+AGG | + | chr2_3:52124774-52124793 | Msa0298200:intron | 30.0% |
| GAAAGCAAAAGAAGAAGAAA+TGG | + | chr2_3:52124851-52124870 | Msa0298200:CDS | 30.0% | |
| CAAAGGTAAACAAAAGGAAA+AGG | + | chr2_3:52124876-52124895 | Msa0298200:CDS | 30.0% | |
| AAAGGAAAAGGTTAACAACA+TGG | + | chr2_3:52124888-52124907 | Msa0298200:CDS | 30.0% | |
| !!! | TTTTACTCTAAAGTTTAGGC+AGG | + | chr2_3:52125406-52125425 | Msa0298200:three_prime_UTR | 30.0% |
| !! | GAATTTGATGATGGAAATTG+GGG | - | chr2_3:52124713-52124732 | None:intergenic | 30.0% |
| !! | GGAATTTGATGATGGAAATT+GGG | - | chr2_3:52124714-52124733 | None:intergenic | 30.0% |
| !! | AGGAATTTGATGATGGAAAT+TGG | - | chr2_3:52124715-52124734 | None:intergenic | 30.0% |
| TAAGGAAAGGAATTTGATGA+TGG | - | chr2_3:52124722-52124741 | None:intergenic | 30.0% | |
| !! | ACTTCCATTTTCTTTGTTGT+AGG | + | chr2_3:52124774-52124793 | Msa0298200:intron | 30.0% |
| GAAAGCAAAAGAAGAAGAAA+TGG | + | chr2_3:52124851-52124870 | Msa0298200:CDS | 30.0% | |
| CAAAGGTAAACAAAAGGAAA+AGG | + | chr2_3:52124876-52124895 | Msa0298200:CDS | 30.0% | |
| AAAGGAAAAGGTTAACAACA+TGG | + | chr2_3:52124888-52124907 | Msa0298200:CDS | 30.0% | |
| CGAGATTTAGATCTAAGGAA+AGG | - | chr2_3:52124735-52124754 | None:intergenic | 35.0% | |
| TGCAACGAGATTTAGATCTA+AGG | - | chr2_3:52124740-52124759 | None:intergenic | 35.0% | |
| AAGAAGAAGAAATGGAGCAA+AGG | + | chr2_3:52124859-52124878 | Msa0298200:CDS | 35.0% | |
| ATGGAGCAAAGGTAAACAAA+AGG | + | chr2_3:52124870-52124889 | Msa0298200:CDS | 35.0% | |
| !! | AACATGGTCTTGTTTGATCA+AGG | + | chr2_3:52124904-52124923 | Msa0298200:CDS | 35.0% |
| TTCAGTGAGAAGCTTATCAT+AGG | - | chr2_3:52124932-52124951 | None:intergenic | 35.0% | |
| GGAGTGATGAGTTTGTATTT+GGG | - | chr2_3:52124958-52124977 | None:intergenic | 35.0% | |
| AGGAGTGATGAGTTTGTATT+TGG | - | chr2_3:52124959-52124978 | None:intergenic | 35.0% | |
| CGAGATTTAGATCTAAGGAA+AGG | - | chr2_3:52124735-52124754 | None:intergenic | 35.0% | |
| TGCAACGAGATTTAGATCTA+AGG | - | chr2_3:52124740-52124759 | None:intergenic | 35.0% | |
| AAGAAGAAGAAATGGAGCAA+AGG | + | chr2_3:52124859-52124878 | Msa0298200:CDS | 35.0% | |
| ATGGAGCAAAGGTAAACAAA+AGG | + | chr2_3:52124870-52124889 | Msa0298200:CDS | 35.0% | |
| !! | AACATGGTCTTGTTTGATCA+AGG | + | chr2_3:52124904-52124923 | Msa0298200:CDS | 35.0% |
| TTCAGTGAGAAGCTTATCAT+AGG | - | chr2_3:52124932-52124951 | None:intergenic | 35.0% | |
| GGAGTGATGAGTTTGTATTT+GGG | - | chr2_3:52124958-52124977 | None:intergenic | 35.0% | |
| AGGAGTGATGAGTTTGTATT+TGG | - | chr2_3:52124959-52124978 | None:intergenic | 35.0% | |
| GCAGAGAAGATTTGGAAGAA+GGG | - | chr2_3:52124647-52124666 | None:intergenic | 40.0% | |
| CTTCTTCCAAATCTTCTCTG+CGG | + | chr2_3:52124646-52124665 | Msa0298200:five_prime_UTR | 40.0% | |
| TCATCAACTCCAAACCCTAA+TGG | + | chr2_3:52124677-52124696 | Msa0298200:exon | 40.0% | |
| !! | TTGATGATGGAAATTGGGGT+TGG | - | chr2_3:52124709-52124728 | None:intergenic | 40.0% |
| GGTGCCTACAACAAAGAAAA+TGG | - | chr2_3:52124781-52124800 | None:intergenic | 40.0% | |
| GAATTGAATCGAAGCGACAA+AGG | - | chr2_3:52125035-52125054 | None:intergenic | 40.0% | |
| TCGTGCAATCAGAGATTTGA+TGG | + | chr2_3:52125107-52125126 | Msa0298200:CDS | 40.0% | |
| ! | ATCAGAGATTTGATGGCAAG+AGG | + | chr2_3:52125114-52125133 | Msa0298200:CDS | 40.0% |
| TGATGGCAAGAGGATTGATT+AGG | + | chr2_3:52125124-52125143 | Msa0298200:CDS | 40.0% | |
| CACTAGAGCCACTAATACAT+AGG | + | chr2_3:52125179-52125198 | Msa0298200:CDS | 40.0% | |
| TAGAGCCACTAATACATAGG+CGG | + | chr2_3:52125182-52125201 | Msa0298200:exon | 40.0% | |
| TGAAACCGCCTATGTATTAG+TGG | - | chr2_3:52125190-52125209 | None:intergenic | 40.0% | |
| CTAATACATAGGCGGTTTCA+AGG | + | chr2_3:52125190-52125209 | Msa0298200:exon | 40.0% | |
| GCAGAGAAGATTTGGAAGAA+GGG | - | chr2_3:52124647-52124666 | None:intergenic | 40.0% | |
| CTTCTTCCAAATCTTCTCTG+CGG | + | chr2_3:52124646-52124665 | Msa0298200:five_prime_UTR | 40.0% | |
| TCATCAACTCCAAACCCTAA+TGG | + | chr2_3:52124677-52124696 | Msa0298200:exon | 40.0% | |
| !! | TTGATGATGGAAATTGGGGT+TGG | - | chr2_3:52124709-52124728 | None:intergenic | 40.0% |
| GGTGCCTACAACAAAGAAAA+TGG | - | chr2_3:52124781-52124800 | None:intergenic | 40.0% | |
| GAATTGAATCGAAGCGACAA+AGG | - | chr2_3:52125035-52125054 | None:intergenic | 40.0% | |
| TCGTGCAATCAGAGATTTGA+TGG | + | chr2_3:52125107-52125126 | Msa0298200:CDS | 40.0% | |
| ! | ATCAGAGATTTGATGGCAAG+AGG | + | chr2_3:52125114-52125133 | Msa0298200:CDS | 40.0% |
| TGATGGCAAGAGGATTGATT+AGG | + | chr2_3:52125124-52125143 | Msa0298200:CDS | 40.0% | |
| CACTAGAGCCACTAATACAT+AGG | + | chr2_3:52125179-52125198 | Msa0298200:CDS | 40.0% | |
| TAGAGCCACTAATACATAGG+CGG | + | chr2_3:52125182-52125201 | Msa0298200:exon | 40.0% | |
| TGAAACCGCCTATGTATTAG+TGG | - | chr2_3:52125190-52125209 | None:intergenic | 40.0% | |
| CTAATACATAGGCGGTTTCA+AGG | + | chr2_3:52125190-52125209 | Msa0298200:exon | 40.0% | |
| CGCAGAGAAGATTTGGAAGA+AGG | - | chr2_3:52124648-52124667 | None:intergenic | 45.0% | |
| TGGTGGTTACCATTAGGGTT+TGG | - | chr2_3:52124689-52124708 | None:intergenic | 45.0% | |
| ! | ATGATGGAAATTGGGGTTGG+TGG | - | chr2_3:52124706-52124725 | None:intergenic | 45.0% |
| !! | TTTGTTGTAGGCACCGAAGA+AGG | + | chr2_3:52124786-52124805 | Msa0298200:intron | 45.0% |
| GGCAAGAGGATTGATTAGGT+TGG | + | chr2_3:52125128-52125147 | Msa0298200:CDS | 45.0% | |
| CGCAGAGAAGATTTGGAAGA+AGG | - | chr2_3:52124648-52124667 | None:intergenic | 45.0% | |
| TGGTGGTTACCATTAGGGTT+TGG | - | chr2_3:52124689-52124708 | None:intergenic | 45.0% | |
| ! | ATGATGGAAATTGGGGTTGG+TGG | - | chr2_3:52124706-52124725 | None:intergenic | 45.0% |
| !! | TTTGTTGTAGGCACCGAAGA+AGG | + | chr2_3:52124786-52124805 | Msa0298200:intron | 45.0% |
| GGCAAGAGGATTGATTAGGT+TGG | + | chr2_3:52125128-52125147 | Msa0298200:CDS | 45.0% | |
| TGCTTGCCGCAGAGAAGATT+TGG | - | chr2_3:52124655-52124674 | None:intergenic | 50.0% | |
| !! | GGGGTTGGTGGTTACCATTA+GGG | - | chr2_3:52124694-52124713 | None:intergenic | 50.0% |
| !! | TGGGGTTGGTGGTTACCATT+AGG | - | chr2_3:52124695-52124714 | None:intergenic | 50.0% |
| !! | GATTTCGCCGGCTTTGATGA+CGG | - | chr2_3:52124823-52124842 | None:intergenic | 50.0% |
| TCATCAAAGCCGGCGAAATC+AGG | + | chr2_3:52124823-52124842 | Msa0298200:CDS | 50.0% | |
| TTTCCTCCTCCTGATTTCGC+CGG | - | chr2_3:52124835-52124854 | None:intergenic | 50.0% | |
| AGACGATCAGAGAGGACTGA+AGG | - | chr2_3:52124979-52124998 | None:intergenic | 50.0% | |
| AGTCCTCTCTGATCGTCTCA+GGG | + | chr2_3:52124981-52125000 | Msa0298200:CDS | 50.0% | |
| ATACCCTGAGACGATCAGAG+AGG | - | chr2_3:52124987-52125006 | None:intergenic | 50.0% | |
| TGCTTGCCGCAGAGAAGATT+TGG | - | chr2_3:52124655-52124674 | None:intergenic | 50.0% | |
| !! | GGGGTTGGTGGTTACCATTA+GGG | - | chr2_3:52124694-52124713 | None:intergenic | 50.0% |
| !! | TGGGGTTGGTGGTTACCATT+AGG | - | chr2_3:52124695-52124714 | None:intergenic | 50.0% |
| !! | GATTTCGCCGGCTTTGATGA+CGG | - | chr2_3:52124823-52124842 | None:intergenic | 50.0% |
| TCATCAAAGCCGGCGAAATC+AGG | + | chr2_3:52124823-52124842 | Msa0298200:CDS | 50.0% | |
| TTTCCTCCTCCTGATTTCGC+CGG | - | chr2_3:52124835-52124854 | None:intergenic | 50.0% | |
| AGACGATCAGAGAGGACTGA+AGG | - | chr2_3:52124979-52124998 | None:intergenic | 50.0% | |
| AGTCCTCTCTGATCGTCTCA+GGG | + | chr2_3:52124981-52125000 | Msa0298200:CDS | 50.0% | |
| ATACCCTGAGACGATCAGAG+AGG | - | chr2_3:52124987-52125006 | None:intergenic | 50.0% | |
| ACCACCACCGTCATCAAAGC+CGG | + | chr2_3:52124813-52124832 | Msa0298200:CDS | 55.0% | |
| TCAAAGCCGGCGAAATCAGG+AGG | + | chr2_3:52124826-52124845 | Msa0298200:CDS | 55.0% | |
| CAGTCCTCTCTGATCGTCTC+AGG | + | chr2_3:52124980-52124999 | Msa0298200:CDS | 55.0% | |
| ACCACCACCGTCATCAAAGC+CGG | + | chr2_3:52124813-52124832 | Msa0298200:CDS | 55.0% | |
| TCAAAGCCGGCGAAATCAGG+AGG | + | chr2_3:52124826-52124845 | Msa0298200:CDS | 55.0% | |
| CAGTCCTCTCTGATCGTCTC+AGG | + | chr2_3:52124980-52124999 | Msa0298200:CDS | 55.0% | |
| !! | GGTGGTGGTGCTGCCTTCTT+CGG | - | chr2_3:52124802-52124821 | None:intergenic | 60.0% |
| !! | TTCGCCGGCTTTGATGACGG+TGG | - | chr2_3:52124820-52124839 | None:intergenic | 60.0% |
| AAGCCGGCGAAATCAGGAGG+AGG | + | chr2_3:52124829-52124848 | Msa0298200:CDS | 60.0% | |
| !! | GGTGGTGGTGCTGCCTTCTT+CGG | - | chr2_3:52124802-52124821 | None:intergenic | 60.0% |
| !! | TTCGCCGGCTTTGATGACGG+TGG | - | chr2_3:52124820-52124839 | None:intergenic | 60.0% |
| AAGCCGGCGAAATCAGGAGG+AGG | + | chr2_3:52124829-52124848 | Msa0298200:CDS | 60.0% | |
| !! | GCCGGCTTTGATGACGGTGG+TGG | - | chr2_3:52124817-52124836 | None:intergenic | 65.0% |
| !! | GCCGGCTTTGATGACGGTGG+TGG | - | chr2_3:52124817-52124836 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52124632 | 52125428 | 52124632 | ID=Msa0298200;Name=Msa0298200 |
| chr2_3 | mRNA | 52124632 | 52125428 | 52124632 | ID=Msa0298200-mRNA-1;Parent=Msa0298200;Name=Msa0298200-mRNA-1;_AED=0.06;_eAED=0.06;_QI=64|1|1|1|1|1|3|228|107 |
| chr2_3 | exon | 52124632 | 52124698 | 52124632 | ID=Msa0298200-mRNA-1:exon:16630;Parent=Msa0298200-mRNA-1 |
| chr2_3 | exon | 52124796 | 52125002 | 52124796 | ID=Msa0298200-mRNA-1:exon:16631;Parent=Msa0298200-mRNA-1 |
| chr2_3 | exon | 52125087 | 52125428 | 52125087 | ID=Msa0298200-mRNA-1:exon:16632;Parent=Msa0298200-mRNA-1 |
| chr2_3 | five_prime_UTR | 52124632 | 52124695 | 52124632 | ID=Msa0298200-mRNA-1:five_prime_utr;Parent=Msa0298200-mRNA-1 |
| chr2_3 | CDS | 52124696 | 52124698 | 52124696 | ID=Msa0298200-mRNA-1:cds;Parent=Msa0298200-mRNA-1 |
| chr2_3 | CDS | 52124796 | 52125002 | 52124796 | ID=Msa0298200-mRNA-1:cds;Parent=Msa0298200-mRNA-1 |
| chr2_3 | CDS | 52125087 | 52125200 | 52125087 | ID=Msa0298200-mRNA-1:cds;Parent=Msa0298200-mRNA-1 |
| chr2_3 | three_prime_UTR | 52125201 | 52125428 | 52125201 | ID=Msa0298200-mRNA-1:three_prime_utr;Parent=Msa0298200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
