AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0297950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297950 MtrunA17_Chr2g0321241 99.542 437 2 0 1 437 1 437 0.0 900
Msa0297950 MtrunA17_Chr4g0026631 91.304 437 33 1 1 437 1 432 0.0 813
Msa0297950 MtrunA17_Chr4g0052271 48.052 308 137 5 71 356 37 343 4.99e-88 277
Msa0297950 MtrunA17_Chr4g0004121 41.509 371 168 7 76 435 195 527 3.21e-87 279
Msa0297950 MtrunA17_Chr7g0246111 42.598 331 174 5 106 435 189 504 2.86e-77 252
Msa0297950 MtrunA17_Chr6g0459561 40.294 340 169 4 106 439 351 662 3.14e-73 245
Msa0297950 MtrunA17_Chr6g0459541 38.567 363 160 8 106 435 11 343 6.66e-70 228
Msa0297950 MtrunA17_Chr2g0297851 71.812 149 32 2 1 149 1 139 2.70e-64 211
Msa0297950 MtrunA17_Chr2g0297851 77.165 127 24 1 5 131 125 246 2.66e-55 187
Msa0297950 MtrunA17_Chr6g0459551 34.447 389 181 10 106 454 71 425 4.91e-58 199
Msa0297950 MtrunA17_Chr4g0038101 46.288 229 117 5 132 356 721 947 1.81e-57 207
Msa0297950 MtrunA17_Chr1g0202381 36.364 330 184 7 42 356 375 693 3.72e-57 204
Msa0297950 MtrunA17_Chr6g0462581 46.725 229 114 5 132 356 500 724 2.44e-56 202
Msa0297950 MtrunA17_Chr8g0387641 43.860 228 125 3 131 356 520 746 1.06e-55 201
Msa0297950 MtrunA17_Chr5g0397121 39.057 297 170 6 66 356 447 738 9.61e-55 197
Msa0297950 MtrunA17_Chr1g0195731 45.662 219 114 4 132 346 934 1151 5.28e-53 194
Msa0297950 MtrunA17_Chr1g0204031 43.119 218 118 4 132 345 557 772 2.17e-52 191
Msa0297950 MtrunA17_Chr1g0202371 41.667 228 127 4 132 356 397 621 8.18e-52 188
Msa0297950 MtrunA17_Chr1g0195741 44.545 220 115 5 132 346 938 1155 6.34e-51 188
Msa0297950 MtrunA17_Chr3g0116131 44.292 219 117 4 132 346 902 1119 6.52e-51 188
Msa0297950 MtrunA17_Chr6g0459531 32.911 316 156 6 121 435 56 316 1.50e-48 171
Msa0297950 MtrunA17_Chr3g0127401 40.870 230 129 5 131 356 80 306 3.87e-48 171
Msa0297950 MtrunA17_Chr3g0127431 40.343 233 132 5 131 359 83 312 4.96e-48 172
Msa0297950 MtrunA17_Chr1g0180791 42.920 226 121 6 126 345 472 695 7.33e-48 178
Msa0297950 MtrunA17_Chr1g0180791 37.607 234 138 6 132 361 205 434 6.75e-41 157
Msa0297950 MtrunA17_Chr2g0327121 42.982 228 118 7 126 345 474 697 7.97e-48 177
Msa0297950 MtrunA17_Chr2g0327121 36.325 234 141 6 132 361 207 436 1.42e-39 154
Msa0297950 MtrunA17_Chr7g0264521 42.478 226 122 6 126 345 473 696 1.14e-47 177
Msa0297950 MtrunA17_Chr7g0264521 37.143 245 142 7 125 361 195 435 1.56e-40 156
Msa0297950 MtrunA17_Chr7g0255641 39.300 257 148 6 110 360 634 888 1.11e-45 172
Msa0297950 MtrunA17_Chr7g0255641 39.683 189 101 6 156 342 425 602 5.85e-29 122
Msa0297950 MtrunA17_Chr7g0255721 38.911 257 149 6 110 360 661 915 1.66e-44 169
Msa0297950 MtrunA17_Chr7g0255721 38.119 202 113 4 169 360 422 621 1.69e-32 132
Msa0297950 MtrunA17_Chr3g0145011 38.115 244 137 9 125 359 131 369 6.41e-43 157
Msa0297950 MtrunA17_Chr4g0050561 39.167 240 133 8 121 351 145 380 1.61e-42 157
Msa0297950 MtrunA17_Chr3g0141901 37.705 244 138 9 125 359 128 366 1.64e-42 156
Msa0297950 MtrunA17_Chr7g0255651 37.344 241 144 5 121 356 271 509 5.70e-42 159
Msa0297950 MtrunA17_Chr7g0255651 28.571 224 145 7 145 360 30 246 4.27e-19 90.9
Msa0297950 MtrunA17_Chr7g0217421 40.773 233 122 9 121 343 26 252 6.75e-42 155
Msa0297950 MtrunA17_Chr7g0255691 38.783 263 150 7 110 364 262 521 6.72e-41 155
Msa0297950 MtrunA17_Chr7g0255691 31.897 232 133 8 137 355 22 241 1.40e-24 107
Msa0297950 MtrunA17_Chr8g0345461 37.903 248 134 9 112 347 145 384 1.17e-40 152
Msa0297950 MtrunA17_Chr8g0362771 38.034 234 134 7 131 360 236 462 1.65e-40 156
Msa0297950 MtrunA17_Chr4g0052411 37.895 285 161 9 120 396 215 491 2.60e-40 155
Msa0297950 MtrunA17_Chr4g0014731 37.555 229 133 7 126 347 162 387 6.55e-40 150
Msa0297950 MtrunA17_Chr1g0192151 37.555 229 133 7 126 347 161 386 6.70e-40 150
Msa0297950 MtrunA17_Chr2g0297281 43.049 223 115 8 129 343 281 499 1.46e-39 153
Msa0297950 MtrunA17_Chr1g0200081 37.652 247 135 9 112 347 155 393 3.83e-39 148
Msa0297950 MtrunA17_Chr7g0255901 36.481 233 130 4 130 351 637 862 1.38e-38 151
Msa0297950 MtrunA17_Chr7g0262801 34.328 268 152 9 126 372 181 445 4.03e-38 145
Msa0297950 MtrunA17_Chr1g0182711 33.955 268 153 9 126 372 182 446 7.43e-38 144
Msa0297950 MtrunA17_Chr3g0108321 39.896 193 110 4 128 315 155 346 1.66e-37 142
Msa0297950 MtrunA17_Chr7g0260601 41.202 233 123 8 129 351 237 465 2.10e-37 147
Msa0297950 MtrunA17_Chr7g0248361 42.478 226 112 9 132 345 192 411 2.30e-37 146
Msa0297950 MtrunA17_Chr4g0031821 41.631 233 122 8 129 351 317 545 4.51e-37 146
Msa0297950 MtrunA17_Chr6g0476861 41.964 224 116 8 132 345 197 416 7.57e-37 145
Msa0297950 MtrunA17_Chr2g0327231 42.442 172 94 4 122 289 335 505 7.44e-36 140
Msa0297950 MtrunA17_Chr3g0143721 38.961 231 131 7 132 356 249 475 8.38e-36 142
Msa0297950 MtrunA17_Chr2g0277831 36.842 228 134 7 130 351 531 754 1.68e-35 141
Msa0297950 MtrunA17_Chr2g0277831 38.251 183 106 4 166 343 277 457 3.99e-29 122
Msa0297950 MtrunA17_Chr6g0456351 36.800 250 142 8 122 361 304 547 3.77e-35 139
Msa0297950 MtrunA17_Chr3g0094871 41.071 224 119 8 131 345 10 229 8.57e-35 136
Msa0297950 MtrunA17_Chr1g0158881 39.914 233 124 10 121 346 318 541 9.07e-35 139
Msa0297950 MtrunA17_Chr3g0135761 36.818 220 130 7 131 346 221 435 2.97e-34 137
Msa0297950 MtrunA17_Chr5g0429571 38.136 236 135 5 131 358 312 544 5.18e-34 137
Msa0297950 MtrunA17_Chr5g0432631 36.818 220 130 7 131 346 228 442 1.25e-33 136
Msa0297950 MtrunA17_Chr3g0086411 39.153 189 104 5 130 312 213 396 2.18e-33 133
Msa0297950 MtrunA17_Chr3g0086411 36.496 137 77 4 219 346 7 142 1.27e-15 79.7
Msa0297950 MtrunA17_Chr2g0331161 39.474 228 118 7 131 347 414 632 3.96e-33 134
Msa0297950 MtrunA17_Chr3g0135721 36.036 222 129 8 131 346 223 437 4.14e-33 134
Msa0297950 MtrunA17_Chr4g0033451 35.470 234 141 5 131 356 379 610 5.67e-33 134
Msa0297950 MtrunA17_Chr3g0104211 38.912 239 135 8 131 361 303 538 1.32e-32 132
Msa0297950 MtrunA17_Chr2g0316851 34.978 223 134 7 134 347 596 816 2.84e-32 132
Msa0297950 MtrunA17_Chr3g0086401 32.414 290 168 10 166 439 128 405 7.85e-32 130
Msa0297950 MtrunA17_Chr3g0086401 37.968 187 111 4 130 313 383 567 1.83e-30 126
Msa0297950 MtrunA17_Chr4g0043381 33.624 229 146 5 134 359 839 1064 1.79e-31 129
Msa0297950 MtrunA17_Chr2g0289231 34.855 241 136 9 120 347 285 517 7.18e-30 123
Msa0297950 MtrunA17_Chr3g0129971 34.629 283 170 6 116 390 282 557 4.38e-28 119
Msa0297950 MtrunA17_Chr3g0135781 39.877 163 92 5 131 291 54 212 7.48e-28 111
Msa0297950 MtrunA17_Chr8g0388371 31.321 265 163 8 132 381 404 664 4.31e-27 116
Msa0297950 MtrunA17_Chr5g0432641 32.273 220 140 7 131 346 190 404 3.99e-25 109
Msa0297950 MtrunA17_Chr8g0357301 31.944 216 129 7 159 362 497 706 6.69e-20 94.0
Msa0297950 MtrunA17_Chr4g0047411 30.769 208 126 7 157 347 200 406 1.13e-19 92.8
Msa0297950 MtrunA17_Chr1g0168321 38.776 147 78 6 208 345 203 346 6.11e-19 90.1
Msa0297950 MtrunA17_Chr1g0190401 30.806 211 132 8 108 311 657 860 5.54e-18 88.2
Msa0297950 MtrunA17_Chr3g0116941 34.161 161 88 4 169 312 197 356 5.93e-17 83.6
Msa0297950 MtrunA17_Chr5g0404291 26.641 259 163 5 114 349 334 588 1.04e-16 83.6
Msa0297950 MtrunA17_Chr4g0039781 27.404 208 122 5 167 349 368 571 2.37e-14 75.9
Msa0297950 MtrunA17_Chr6g0450161 27.053 207 123 5 167 349 362 564 3.17e-14 75.5
Msa0297950 MtrunA17_Chr4g0062081 40.506 79 45 2 135 211 10 88 6.91e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297950 AT2G27600.1 90.389 437 39 1 1 437 1 434 0.0 806
Msa0297950 AT1G80350.1 41.504 359 175 6 86 435 189 521 7.26e-88 281
Msa0297950 AT2G34560.2 42.042 333 165 6 110 440 87 393 2.00e-83 265
Msa0297950 AT2G45500.4 41.737 357 171 5 80 435 32 352 2.06e-83 263
Msa0297950 AT2G45500.3 41.737 357 171 5 80 435 32 352 2.06e-83 263
Msa0297950 AT2G34560.1 42.042 333 165 6 110 440 78 384 2.17e-83 265
Msa0297950 AT2G45500.2 41.737 357 171 5 80 435 165 485 1.07e-81 263
Msa0297950 AT2G45500.5 41.737 357 171 5 80 435 175 495 1.07e-81 264
Msa0297950 AT2G45500.1 41.737 357 171 5 80 435 169 489 1.24e-81 263
Msa0297950 AT3G27120.1 39.583 336 169 4 106 435 369 676 5.85e-71 240
Msa0297950 AT1G08270.1 75.758 132 22 1 33 164 1 122 1.35e-59 193
Msa0297950 AT1G08270.2 74.242 132 24 1 33 164 1 122 3.48e-58 190
Msa0297950 AT1G50140.3 47.826 230 112 5 132 356 711 937 5.78e-58 209
Msa0297950 AT1G50140.1 47.826 230 112 5 132 356 711 937 5.78e-58 209
Msa0297950 AT1G50140.4 47.826 230 112 5 132 356 711 937 5.78e-58 209
Msa0297950 AT1G50140.2 47.826 230 112 5 132 356 689 915 6.57e-58 208
Msa0297950 AT1G50140.5 47.826 230 112 5 132 356 689 915 6.57e-58 208
Msa0297950 AT3G19740.1 47.162 229 115 4 132 356 701 927 3.32e-57 206
Msa0297950 AT1G64110.2 44.635 233 122 4 128 356 514 743 1.01e-55 201
Msa0297950 AT1G64110.4 44.635 233 122 4 128 356 514 743 1.01e-55 201
Msa0297950 AT1G64110.1 44.635 233 122 4 128 356 509 738 1.04e-55 201
Msa0297950 AT1G64110.5 44.635 233 122 4 128 356 512 741 1.09e-55 201
Msa0297950 AT1G64110.3 44.635 233 122 4 128 356 512 741 1.09e-55 201
Msa0297950 AT4G28000.3 43.860 228 122 4 132 356 517 741 8.79e-55 198
Msa0297950 AT4G28000.1 43.860 228 122 4 132 356 515 739 1.25e-54 197
Msa0297950 AT4G28000.2 43.860 228 122 4 132 356 517 741 1.45e-54 197
Msa0297950 AT5G52882.1 43.860 228 122 4 132 356 514 738 2.49e-53 194
Msa0297950 AT5G53540.1 38.356 292 143 8 131 418 83 341 2.13e-52 184
Msa0297950 AT4G02480.1 44.105 229 122 5 132 356 960 1186 5.14e-52 192
Msa0297950 AT4G24860.4 43.966 232 121 5 121 346 779 1007 2.04e-51 190
Msa0297950 AT4G24860.2 43.966 232 121 5 121 346 802 1030 2.28e-51 190
Msa0297950 AT4G24860.3 43.966 232 121 5 121 346 804 1032 2.28e-51 190
Msa0297950 AT4G24860.1 43.966 232 121 5 121 346 806 1034 2.47e-51 189
Msa0297950 AT1G02890.1 44.156 231 119 7 132 356 941 1167 5.92e-51 189
Msa0297950 AT4G27680.1 38.014 292 144 8 131 418 80 338 1.28e-50 179
Msa0297950 AT3G53230.1 43.363 226 120 6 126 345 472 695 1.23e-48 181
Msa0297950 AT3G53230.1 37.179 234 139 6 132 361 205 434 4.28e-40 155
Msa0297950 AT5G03340.1 42.920 226 121 6 126 345 471 694 1.39e-48 180
Msa0297950 AT5G03340.1 37.179 234 139 6 132 361 204 433 3.70e-40 155
Msa0297950 AT3G09840.1 42.731 227 121 6 126 345 471 695 2.70e-46 174
Msa0297950 AT3G09840.1 37.021 235 140 6 131 361 203 433 2.02e-40 156
Msa0297950 AT3G56690.1 41.700 247 132 7 110 348 697 939 3.68e-44 168
Msa0297950 AT3G56690.1 36.224 196 121 3 166 359 416 609 2.39e-33 135
Msa0297950 AT5G43010.1 38.683 243 137 10 125 359 128 366 6.80e-44 160
Msa0297950 AT1G45000.1 38.776 245 134 11 125 359 128 366 4.35e-43 158
Msa0297950 AT5G19990.2 39.167 240 133 8 121 351 89 324 2.89e-42 155
Msa0297950 AT2G03670.1 42.060 233 117 6 121 342 272 497 4.21e-42 159
Msa0297950 AT2G03670.1 31.707 246 151 8 131 363 15 256 7.90e-28 118
Msa0297950 AT5G20000.1 39.167 240 133 8 121 351 147 382 9.19e-42 155
Msa0297950 AT5G19990.1 39.167 240 133 8 121 351 147 382 1.08e-41 155
Msa0297950 AT5G19990.3 39.167 240 133 8 121 351 147 382 1.08e-41 155
Msa0297950 AT1G06430.1 40.711 253 138 8 117 361 200 448 1.75e-41 159
Msa0297950 AT1G06430.3 40.711 253 138 8 117 361 200 448 1.75e-41 159
Msa0297950 AT1G06430.2 40.711 253 138 8 117 361 200 448 1.75e-41 159
Msa0297950 AT2G30950.1 39.921 253 140 8 117 361 207 455 3.98e-41 158
Msa0297950 AT2G30950.2 39.921 253 140 8 117 361 207 455 3.98e-41 158
Msa0297950 AT2G30950.3 39.921 253 140 8 117 361 207 455 3.98e-41 158
Msa0297950 AT2G30950.4 39.921 253 140 8 117 361 211 459 4.21e-41 158
Msa0297950 AT5G58290.1 37.553 237 139 6 128 358 148 381 1.51e-40 152
Msa0297950 AT1G53750.1 37.903 248 134 9 112 347 145 384 1.78e-40 152
Msa0297950 AT3G05530.1 37.991 229 132 7 126 347 162 387 2.83e-40 151
Msa0297950 AT3G02450.1 38.430 242 134 8 128 361 327 561 1.08e-39 153
Msa0297950 AT1G09100.1 37.719 228 134 6 126 347 161 386 1.21e-39 149
Msa0297950 AT4G29040.1 34.328 268 152 9 126 372 179 443 1.58e-38 147
Msa0297950 AT2G20140.1 34.328 268 152 9 126 372 179 443 2.27e-38 146
Msa0297950 AT1G03000.1 35.622 233 142 5 130 356 653 883 3.84e-38 150
Msa0297950 AT1G62130.2 38.182 220 117 7 132 346 743 948 5.35e-38 150
Msa0297950 AT1G62130.1 38.182 220 117 7 132 346 750 955 6.76e-38 149
Msa0297950 AT1G07510.1 40.984 244 130 8 118 351 310 549 1.73e-37 148
Msa0297950 AT5G42270.1 40.260 231 128 7 132 356 247 473 3.90e-37 146
Msa0297950 AT1G53780.1 36.290 248 138 9 112 347 317 556 6.16e-37 145
Msa0297950 AT1G53780.4 36.290 248 138 9 112 347 317 556 6.16e-37 145
Msa0297950 AT1G53780.3 35.918 245 143 8 112 347 316 555 6.28e-37 145
Msa0297950 AT1G53780.2 36.290 248 138 9 112 347 338 577 7.16e-37 145
Msa0297950 AT5G15250.1 36.508 252 144 9 120 361 207 452 7.45e-37 145
Msa0297950 AT1G50250.1 38.983 236 124 8 132 356 259 485 1.14e-35 142
Msa0297950 AT2G29080.1 41.949 236 126 8 118 345 305 537 1.46e-35 142
Msa0297950 AT1G02890.2 37.229 231 107 8 132 356 941 1139 1.07e-34 140
Msa0297950 AT5G53170.1 38.793 232 128 8 121 346 348 571 4.81e-34 137
Msa0297950 AT3G15120.2 34.802 227 137 6 134 351 728 952 5.13e-34 138
Msa0297950 AT3G15120.1 34.802 227 137 6 134 351 718 942 5.36e-34 138
Msa0297950 AT2G26140.1 36.364 220 131 7 131 346 223 437 1.34e-33 136
Msa0297950 AT3G47060.1 34.296 277 147 6 91 358 303 553 2.46e-33 135
Msa0297950 AT5G15250.2 33.818 275 143 10 120 361 207 475 2.82e-33 133
Msa0297950 AT3G16290.1 39.474 228 118 7 131 347 406 624 5.14e-33 134
Msa0297950 AT5G58870.1 37.179 234 140 5 131 358 325 557 1.38e-32 133
Msa0297950 AT1G05910.1 35.841 226 134 6 131 347 377 600 3.78e-32 132
Msa0297950 AT3G01610.1 36.957 230 135 7 130 354 523 747 2.00e-31 129
Msa0297950 AT3G01610.1 36.607 224 122 6 134 342 232 450 1.60e-30 127
Msa0297950 AT3G01610.2 36.957 230 135 7 130 354 523 747 2.89e-31 129
Msa0297950 AT3G01610.2 36.607 224 122 6 134 342 232 450 1.83e-30 127
Msa0297950 AT5G08470.1 31.449 283 169 8 134 411 843 1105 2.29e-30 127
Msa0297950 AT5G08470.3 31.449 283 169 8 134 411 834 1096 2.39e-30 127
Msa0297950 AT4G04180.2 34.956 226 128 8 132 345 311 529 5.25e-29 121
Msa0297950 AT4G04180.1 34.956 226 128 8 132 345 316 534 5.29e-29 121
Msa0297950 AT2G03670.2 31.707 246 151 8 131 363 15 256 2.06e-28 118
Msa0297950 AT2G03670.2 43.333 150 81 2 121 266 272 421 4.82e-26 111
Msa0297950 AT5G64580.1 34.783 253 155 4 115 359 298 548 7.04e-28 119
Msa0297950 AT1G45000.2 40.000 145 83 4 125 265 128 272 6.83e-27 112
Msa0297950 AT4G23940.1 33.061 245 146 7 132 362 427 667 9.45e-27 115
Msa0297950 AT1G79560.3 35.437 206 115 7 169 362 527 726 1.34e-23 105
Msa0297950 AT1G79560.2 35.437 206 115 7 169 362 527 726 1.34e-23 105
Msa0297950 AT1G79560.1 35.437 206 115 7 169 362 527 726 1.52e-23 105
Msa0297950 AT5G08470.2 37.584 149 86 4 134 279 843 987 4.73e-22 101
Msa0297950 AT4G04910.1 30.952 210 123 8 157 347 237 443 1.07e-18 90.5
Msa0297950 AT3G04340.1 31.746 189 119 7 130 311 779 964 6.97e-17 85.1
Msa0297950 AT4G24710.3 32.298 161 91 4 169 312 215 374 1.25e-15 80.1
Msa0297950 AT4G24710.1 32.298 161 91 4 169 312 203 362 1.27e-15 79.7
Msa0297950 AT4G36580.1 27.488 211 121 5 167 349 381 587 4.00e-14 75.9
Msa0297950 AT2G18330.1 27.103 214 121 5 167 349 384 593 7.22e-14 74.7
Msa0297950 AT3G03060.1 27.404 208 122 5 167 349 385 588 8.89e-14 74.7
Msa0297950 AT5G16930.1 26.923 208 123 5 167 349 397 600 1.57e-13 73.9

Find 147 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATCTTCCCCAATTTCT+AGG 0.173936 2_3:-51867105 Msa0297950:five_prime_UTR
GGTTGAATTCTGCGATTATT+AGG 0.186943 2_3:-51866636 Msa0297950:CDS
CTGCAAGAACAAGAACTTTC+TGG 0.202134 2_3:+51863202 None:intergenic
AAAAGGGAAACCCTAGAAAT+TGG 0.216790 2_3:+51867094 None:intergenic
GATTCAAATATACACAATTT+AGG 0.234814 2_3:+51862093 None:intergenic
AAGGATGGTGGTGGGGAGGG+TGG 0.244754 2_3:-51866706 Msa0297950:CDS
GGTGGGGAGGGTGGTGGAGG+TGG 0.245687 2_3:-51866697 Msa0297950:CDS
GATGGTGGTGGGGAGGGTGG+TGG 0.246166 2_3:-51866703 Msa0297950:CDS
TCAAAATCTGTTCTTGTAAT+GGG 0.258427 2_3:+51862387 None:intergenic
TCCCCGAAAATAACATAAAA+AGG 0.262830 2_3:+51862177 None:intergenic
GGTGGTGGGGAGGGTGGTGG+AGG 0.266118 2_3:-51866700 Msa0297950:CDS
GTGCTTGATGACGGTGGGCC+AGG 0.284572 2_3:-51866781 Msa0297950:CDS
TGGTGATCTGATCGGAAATA+AGG 0.285855 2_3:+51867129 None:intergenic
TTTCTCGAGCCATTTGAAAA+AGG 0.305402 2_3:+51864373 None:intergenic
TTCAAAATCTGTTCTTGTAA+TGG 0.305475 2_3:+51862386 None:intergenic
GAGAGATTCACAAAGGAGTT+TGG 0.323238 2_3:-51862309 Msa0297950:CDS
GGCCCGCCAACACATGTTTA+AGG 0.326809 2_3:-51863017 Msa0297950:intron
GTTGAATTCTGCGATTATTA+GGG 0.328089 2_3:-51866635 Msa0297950:CDS
TCTAAAGCGTTCATGTATAA+AGG 0.341061 2_3:+51866907 None:intergenic
GAGTGCTAAACAGGCTTTGC+AGG 0.354509 2_3:-51866572 Msa0297950:CDS
GGGGAAGGATGGTGGTGGGG+AGG 0.359432 2_3:-51866710 Msa0297950:CDS
ATTTGTATTTGCAGGCAATA+AGG 0.365094 2_3:-51863084 Msa0297950:intron
AAAGGGAAACCCTAGAAATT+GGG 0.373360 2_3:+51867095 None:intergenic
GGAAATAAGGGAGGAAGAAA+AGG 0.375046 2_3:+51867142 None:intergenic
AAAGAAGAACATAGCATCTT+GGG 0.376196 2_3:+51862667 None:intergenic
TACGTCGTGCTGAGGAGATC+AGG 0.383073 2_3:-51866807 Msa0297950:CDS
TAAAGAAGAACATAGCATCT+TGG 0.387294 2_3:+51862666 None:intergenic
TATTCCACTACCAGATTTGA+AGG 0.389227 2_3:-51863038 Msa0297950:CDS
TAAGGGGAAGGATGGTGGTG+GGG 0.390562 2_3:-51866713 Msa0297950:CDS
TCCTCATAATTTAACTGAAA+AGG 0.391490 2_3:-51862869 Msa0297950:CDS
TAAATCAACCTCCGCACAAT+CGG 0.391564 2_3:+51862144 None:intergenic
GGGAAGGATGGTGGTGGGGA+GGG 0.396231 2_3:-51866709 Msa0297950:CDS
TTGTATGGACCTCCTGGAAC+TGG 0.396491 2_3:-51865228 Msa0297950:CDS
CCCTGTTGCTTTGGTCCACA+TGG 0.396687 2_3:+51862620 None:intergenic
CCCATGTGGACCAAAGCAAC+AGG 0.401299 2_3:-51862621 Msa0297950:CDS
TGAATCTCTCATGAACTTCA+AGG 0.403290 2_3:+51862322 None:intergenic
TGGGTTGGAGAGTGCTAAAC+AGG 0.403615 2_3:-51866581 Msa0297950:CDS
TGAACTGCGCCCTGTTGCTT+TGG 0.404749 2_3:+51862611 None:intergenic
TCCGGCATTGTCTTCGTGTA+CGG 0.414643 2_3:+51866948 None:intergenic
ATTCATTAAAGATGCTGGTT+AGG 0.417064 2_3:-51861905 None:intergenic
GAGGGTGGTGGAGGTGGTGA+AGG 0.417655 2_3:-51866691 Msa0297950:CDS
TGTTGGCGGGCCTTCAAATC+TGG 0.417810 2_3:+51863028 None:intergenic
CTTCTCCACGCTGGCCACAT+AGG 0.417992 2_3:+51864313 None:intergenic
AGTAAGGGGAAGGATGGTGG+TGG 0.426631 2_3:-51866715 Msa0297950:CDS
ACGAATCAAAACAGAACTTC+TGG 0.429142 2_3:-51864268 Msa0297950:CDS
ACAAAGGAGTTTGGAGAAGA+AGG 0.429561 2_3:-51862300 Msa0297950:intron
ACATCATTCCACTTCACATT+CGG 0.436215 2_3:+51866607 None:intergenic
AACGATGTATAGCAATTTCA+AGG 0.438031 2_3:-51866998 Msa0297950:exon
GAGGAAGAAAAGGGGAAAGA+TGG 0.445165 2_3:+51867152 None:intergenic
GCTCTAAGCTTCGCCTGCTC+CGG 0.446126 2_3:+51866661 None:intergenic
GGGCCAGGGCCAGCTTCTAA+TGG 0.448570 2_3:-51866766 Msa0297950:CDS
TTCATCAACAAATATGATAG+AGG 0.451811 2_3:+51864344 None:intergenic
GAAATAAGGGAGGAAGAAAA+GGG 0.456910 2_3:+51867143 None:intergenic
CCATCCTTCCCCTTACTCTT+CGG 0.459708 2_3:+51866721 None:intergenic
TGCTACGAGGCCGAAGAGTA+AGG 0.461247 2_3:-51866731 Msa0297950:CDS
ACTGAATTCATTAAAGATGC+TGG 0.463463 2_3:-51861910 Msa0297950:CDS
GGTGATCTGATCGGAAATAA+GGG 0.465251 2_3:+51867130 None:intergenic
TCGCCATTAGAAGCTGGCCC+TGG 0.467828 2_3:+51866763 None:intergenic
TAAATTGAGCAGGTGCATCT+TGG 0.468085 2_3:-51862898 Msa0297950:intron
AGATCTTGTTTCAAAGTGGA+TGG 0.468719 2_3:-51864421 Msa0297950:CDS
TTAAGAGTCCTGAGGGTATG+TGG 0.469882 2_3:-51862646 Msa0297950:CDS
AATTGAAAATTGAAAATTGA+GGG 0.471632 2_3:+51867052 None:intergenic
GTGGAATGATGTTGCTGGGT+TGG 0.472353 2_3:-51866596 Msa0297950:CDS
CTTACCTGGTCTAAAGCATA+AGG 0.474963 2_3:+51863168 None:intergenic
GTGAAGTGGAATGATGTTGC+TGG 0.477745 2_3:-51866601 Msa0297950:CDS
TGAAAAGGATTATGAATACT+TGG 0.477851 2_3:-51862854 Msa0297950:CDS
GTAAGGGGAAGGATGGTGGT+GGG 0.478141 2_3:-51866714 Msa0297950:CDS
TGCCTTAAACATGTGTTGGC+GGG 0.478809 2_3:+51863015 None:intergenic
GTCATGGTGGTTGCTTATGT+TGG 0.479616 2_3:-51862045 Msa0297950:CDS
ATTATGAATACTTGGCTAGC+AGG 0.480856 2_3:-51862846 Msa0297950:CDS
TTGCCTTAAACATGTGTTGG+CGG 0.483730 2_3:+51863014 None:intergenic
TTCTTCTTTAAGAGTCCTGA+GGG 0.484201 2_3:-51862653 Msa0297950:CDS
ATCATCTTCCCCAATTTCTA+GGG 0.484872 2_3:-51867104 Msa0297950:five_prime_UTR
AGAACTTCTGGTGCAGATGC+AGG 0.485421 2_3:-51864256 Msa0297950:intron
ATGACGGATCTTGCTACAAA+AGG 0.487123 2_3:-51862581 Msa0297950:CDS
TGGTGGAGGTGGTGAAGGAG+AGG 0.488082 2_3:-51866686 Msa0297950:CDS
CCCTTGCCTTAAACATGTGT+TGG 0.488382 2_3:+51863011 None:intergenic
AGGTGGTGAAGGAGAGGATC+CGG 0.491616 2_3:-51866680 Msa0297950:CDS
TGCTTGATGACGGTGGGCCA+GGG 0.491756 2_3:-51866780 Msa0297950:CDS
TTCTCCACGCTGGCCACATA+GGG 0.495975 2_3:+51864314 None:intergenic
CATCAGATCTTGTTTCAAAG+TGG 0.499401 2_3:-51864425 Msa0297950:CDS
AGAAAAGGGGAAAGATGGAT+TGG 0.499472 2_3:+51867157 None:intergenic
CAAAATCTGTTCTTGTAATG+GGG 0.501472 2_3:+51862388 None:intergenic
CTATGTGGCCAGCGTGGAGA+AGG 0.514378 2_3:-51864312 Msa0297950:CDS
AAAAGGTTCTTGCTAGGCAA+AGG 0.518856 2_3:-51862365 Msa0297950:CDS
TACAAAAGGACTTGCTTCAA+AGG 0.521759 2_3:-51862567 Msa0297950:intron
GAGCAGGCGAAGCTTAGAGC+GGG 0.525277 2_3:-51866658 Msa0297950:CDS
TCATCAACAAATATGATAGA+GGG 0.526931 2_3:+51864345 None:intergenic
AAATCAACCTCCGCACAATC+GGG 0.529888 2_3:+51862145 None:intergenic
GCGGCATCGCCATTAGAAGC+TGG 0.534830 2_3:+51866757 None:intergenic
TGGAAAATCATATTTAGCTA+AGG 0.535949 2_3:-51865208 Msa0297950:CDS
CGGGCCTTCAAATCTGGTAG+TGG 0.539272 2_3:+51863034 None:intergenic
AAAATCTGTTCTTGTAATGG+GGG 0.541123 2_3:+51862389 None:intergenic
TGAAGGAGAGGATCCGGAGC+AGG 0.541483 2_3:-51866674 Msa0297950:CDS
TGAAAATTGAAAATTGAGGG+AGG 0.543624 2_3:+51867055 None:intergenic
AGCTTCTAATGGCGATGCCG+CGG 0.546566 2_3:-51866755 Msa0297950:CDS
CCGAAGAGTAAGGGGAAGGA+TGG 0.547863 2_3:-51866721 Msa0297950:CDS
GCTACGAGGCCGAAGAGTAA+GGG 0.547998 2_3:-51866730 Msa0297950:CDS
CGGAGGTTGATTTATTACGA+TGG 0.548713 2_3:-51862135 Msa0297950:CDS
TACTTGGCTAGCAGGACAGA+GGG 0.548985 2_3:-51862838 Msa0297950:CDS
CTAGAAATTGGGGAAGATGA+TGG 0.552694 2_3:+51867106 None:intergenic
AAATTGAAAATTGAAAATTG+AGG 0.558367 2_3:+51867051 None:intergenic
CCTGTTGCTTTGGTCCACAT+GGG 0.563250 2_3:+51862621 None:intergenic
CGCAGTTCAAACTACAATGA+CGG 0.571283 2_3:-51862597 Msa0297950:CDS
GTTCTTCTTTAAGAGTCCTG+AGG 0.572301 2_3:-51862654 Msa0297950:CDS
AGCTAAGGCAGTTGCAACTG+AGG 0.574398 2_3:-51865193 Msa0297950:CDS
GATCTTGTTTCAAAGTGGAT+GGG 0.577099 2_3:-51864420 Msa0297950:CDS
AAGGGAAACCCTAGAAATTG+GGG 0.579108 2_3:+51867096 None:intergenic
CACACCTTATGCTTTAGACC+AGG 0.580873 2_3:-51863172 Msa0297950:intron
AGGGCTGTGCTTGATGACGG+TGG 0.587321 2_3:-51866787 Msa0297950:CDS
ACGTCGTGCTGAGGAGATCA+GGG 0.588419 2_3:-51866806 Msa0297950:CDS
CTCAGCACGACGTAAATACT+CGG 0.590884 2_3:+51866816 None:intergenic
AAGAGTAAGGGGAAGGATGG+TGG 0.591605 2_3:-51866718 Msa0297950:CDS
ATCAGGGCTGTGCTTGATGA+CGG 0.592760 2_3:-51866790 Msa0297950:CDS
GGGAAAAGCCGAATGTGAAG+TGG 0.593964 2_3:-51866615 Msa0297950:CDS
TCTCATTGCCTTCTCCACGC+TGG 0.597326 2_3:+51864304 None:intergenic
GCCGTACACGAAGACAATGC+CGG 0.598847 2_3:-51866949 Msa0297950:CDS
TGAAGTGGAATGATGTTGCT+GGG 0.601617 2_3:-51866600 Msa0297950:CDS
CGAGTATTTACGTCGTGCTG+AGG 0.603573 2_3:-51866815 Msa0297950:CDS
CATGGGATCCACATACCCTC+AGG 0.604619 2_3:+51862638 None:intergenic
GGGCTGTGCTTGATGACGGT+GGG 0.609283 2_3:-51866786 Msa0297950:CDS
CTACGAGGCCGAAGAGTAAG+GGG 0.613832 2_3:-51866729 Msa0297950:CDS
ATGTGAAGTTCCCGATTGTG+CGG 0.613924 2_3:-51862155 Msa0297950:CDS
CCACTCATATTGTAGGGTGT+AGG 0.618221 2_3:-51863234 Msa0297950:intron
GCGATGCCGCGGTTGCTACG+AGG 0.619805 2_3:-51866744 Msa0297950:CDS
AAATCTGTTCTTGTAATGGG+GGG 0.629544 2_3:+51862390 None:intergenic
TAGAAAACTAACTTGTGTCA+TGG 0.636740 2_3:-51862061 Msa0297950:CDS
CATCAACAAATATGATAGAG+GGG 0.637776 2_3:+51864346 None:intergenic
TGAAGTTCCCGATTGTGCGG+AGG 0.638548 2_3:-51862152 Msa0297950:CDS
GATGAAATAGATTCCCTATG+TGG 0.643720 2_3:-51864327 Msa0297950:CDS
AAATAAGGGAGGAAGAAAAG+GGG 0.646338 2_3:+51867144 None:intergenic
GAGGCCGAAGAGTAAGGGGA+AGG 0.649712 2_3:-51866725 Msa0297950:CDS
ATCAACAAATATGATAGAGG+GGG 0.666172 2_3:+51864347 None:intergenic
GAGGGTATGTGGATCCCATG+TGG 0.666781 2_3:-51862635 Msa0297950:CDS
GATGATGGTGGTGATCTGAT+CGG 0.672388 2_3:+51867121 None:intergenic
GGAGCAGGCGAAGCTTAGAG+CGG 0.673581 2_3:-51866659 Msa0297950:CDS
CCATGTGGACCAAAGCAACA+GGG 0.676849 2_3:-51862620 Msa0297950:CDS
AGCAGGCGAAGCTTAGAGCG+GGG 0.677406 2_3:-51866657 Msa0297950:CDS
ATACTTGGCTAGCAGGACAG+AGG 0.680894 2_3:-51862839 Msa0297950:CDS
GATTCCCTATGTGGCCAGCG+TGG 0.682011 2_3:-51864318 Msa0297950:CDS
CTTCGGCCTCGTAGCAACCG+CGG 0.685179 2_3:+51866738 None:intergenic
AGTTCATGAGAGATTCACAA+AGG 0.699715 2_3:-51862316 Msa0297950:CDS
TTTCAGGTAAAAGACGACCA+TGG 0.700290 2_3:-51865263 Msa0297950:intron
ACTTGGCTAGCAGGACAGAG+GGG 0.708147 2_3:-51862837 Msa0297950:CDS
AAAACTAACTTGTGTCATGG+TGG 0.713532 2_3:-51862058 Msa0297950:CDS
GATCTGATCGGAAATAAGGG+AGG 0.715496 2_3:+51867133 None:intergenic
GAAATTGGGGAAGATGATGG+TGG 0.749083 2_3:+51867109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAACAATAAAATTC+AGG + chr2_3:51866189-51866208 None:intergenic 10.0%
!! AATTGAAAATTGAAAATTGA+GGG + chr2_3:51862104-51862123 None:intergenic 15.0%
!! AAATTGAAAATTGAAAATTG+AGG + chr2_3:51862105-51862124 None:intergenic 15.0%
!!! TCATTTTCTTAAATTATTAC+TGG + chr2_3:51863015-51863034 None:intergenic 15.0%
!! AATTTAAGAAAATGATTTAC+CGG - chr2_3:51863020-51863039 Msa0297950:CDS 15.0%
!!! TTGTATTTTATTTAGGTTTT+TGG + chr2_3:51864269-51864288 None:intergenic 15.0%
!! AATAATATAGTAATTTCCAT+AGG + chr2_3:51864308-51864327 None:intergenic 15.0%
!! ATAGGTAAAAAAATGATATA+GGG + chr2_3:51864370-51864389 None:intergenic 15.0%
!! TATAGGTAAAAAAATGATAT+AGG + chr2_3:51864371-51864390 None:intergenic 15.0%
!! TCTTTATCTTATCAATATAT+AGG + chr2_3:51864388-51864407 None:intergenic 15.0%
!! TGGAAATATTCAATAAATAA+AGG + chr2_3:51865035-51865054 None:intergenic 15.0%
!!! TTTTTTTTACAGAAATGATT+TGG + chr2_3:51865055-51865074 None:intergenic 15.0%
!! ATTTGTTTGTGAAGAAAAAA+GGG + chr2_3:51862078-51862097 None:intergenic 20.0%
!!! GTTTTTTTCGTACTTTAAAT+GGG + chr2_3:51862283-51862302 None:intergenic 20.0%
!!! GTTGTTTTTATATGATATCA+TGG - chr2_3:51862758-51862777 Msa0297950:intron 20.0%
!! AATAAGCTGAAAACAATTTA+TGG - chr2_3:51862813-51862832 Msa0297950:CDS 20.0%
!! ATAAGCTGAAAACAATTTAT+GGG - chr2_3:51862814-51862833 Msa0297950:CDS 20.0%
!! ATACAAAATTGCAAATCTTA+AGG - chr2_3:51863547-51863566 Msa0297950:intron 20.0%
!! TACAAAATTGCAAATCTTAA+GGG - chr2_3:51863548-51863567 Msa0297950:intron 20.0%
!! AACTTTAATGATATATTGAC+AGG - chr2_3:51863792-51863811 Msa0297950:intron 20.0%
!! AAATTGTTCTATTGTTTACA+TGG - chr2_3:51864005-51864024 Msa0297950:intron 20.0%
!! GTTAAAGAAATTTCTACATT+AGG - chr2_3:51864047-51864066 Msa0297950:intron 20.0%
!! AATTCTACTTAAATACCAAA+TGG + chr2_3:51864219-51864238 None:intergenic 20.0%
!!! TAGGACTTTGTATTTTATTT+AGG + chr2_3:51864276-51864295 None:intergenic 20.0%
!! AAAAAAATGATATAGGGTAA+AGG + chr2_3:51864364-51864383 None:intergenic 20.0%
!! TGATAAGATAAAGATGAAAA+AGG - chr2_3:51864394-51864413 Msa0297950:CDS 20.0%
!! TTTCTGTATTGTTATGAATT+AGG - chr2_3:51864643-51864662 Msa0297950:intron 20.0%
!!! CAAAAGTTAAAAATGCTTTT+AGG + chr2_3:51864687-51864706 None:intergenic 20.0%
!!! TTGTTTTTTTTTGTGTGATT+TGG + chr2_3:51865082-51865101 None:intergenic 20.0%
!!! TTTTTAAATGTAGTTTTCCT+TGG - chr2_3:51865172-51865191 Msa0297950:intron 20.0%
!!! AATGCTTCAATTTTTTATGT+TGG - chr2_3:51865284-51865303 Msa0297950:intron 20.0%
!!! TTTTTGTAGGCATTTTTTTA+GGG + chr2_3:51865476-51865495 None:intergenic 20.0%
!!! AAAAATATCGTTTAAAACGA+AGG + chr2_3:51865508-51865527 None:intergenic 20.0%
!! TTGCTTCTTATTAGTATATT+GGG - chr2_3:51865612-51865631 Msa0297950:intron 20.0%
!! AGAACATAAACAAAAAATGT+TGG + chr2_3:51865864-51865883 None:intergenic 20.0%
!! TTATATATAAACCTAGCAAA+TGG - chr2_3:51866200-51866219 Msa0297950:intron 20.0%
!!! AACGTGTCATTTTATTTTTT+TGG - chr2_3:51866227-51866246 Msa0297950:intron 20.0%
!!! AAAAACTTTTTAATCTCTTC+AGG - chr2_3:51866430-51866449 Msa0297950:intron 20.0%
!!! TGGTTGTATTTTTTTGAAAT+TGG - chr2_3:51866640-51866659 Msa0297950:CDS 20.0%
!!! TTTTTTGAAATTGGAGAAAT+AGG - chr2_3:51866649-51866668 Msa0297950:CDS 20.0%
!!! TTTTTGAAATTGGAGAAATA+GGG - chr2_3:51866650-51866669 Msa0297950:CDS 20.0%
!!! AATTATAACACATCTAAAAC+TGG + chr2_3:51866919-51866938 None:intergenic 20.0%
!!! CATCCTTTTTATGTTATTTT+CGG - chr2_3:51866973-51866992 Msa0297950:CDS 20.0%
!!! ATCCTTTTTATGTTATTTTC+GGG - chr2_3:51866974-51866993 Msa0297950:CDS 20.0%
!! GATTCAAATATACACAATTT+AGG + chr2_3:51867063-51867082 None:intergenic 20.0%
!! TTTCATCTTGTAAAAAAAGA+TGG - chr2_3:51867166-51867185 Msa0297950:five_prime_UTR 20.0%
!!! AGTTTTTTGTCATCAATCTA+TGG + chr2_3:51861921-51861940 None:intergenic 25.0%
!! GATTTGTTTGTGAAGAAAAA+AGG + chr2_3:51862079-51862098 None:intergenic 25.0%
!!! GGTTTTTTTCGTACTTTAAA+TGG + chr2_3:51862284-51862303 None:intergenic 25.0%
!! TAATTGCTTCTCTGATTTTA+GGG + chr2_3:51862305-51862324 None:intergenic 25.0%
!!! AAGTTTCCTCAATTTTTTAC+TGG - chr2_3:51862624-51862643 Msa0297950:CDS 25.0%
!! TTTGTTGTCTTCTCAATATT+AGG - chr2_3:51863307-51863326 Msa0297950:intron 25.0%
! ATTATGCATAAAGAACTAGA+AGG - chr2_3:51863375-51863394 Msa0297950:intron 25.0%
! AAATCAATATGATCAATCCT+TGG + chr2_3:51863450-51863469 None:intergenic 25.0%
!!! AGGATTGATCATATTGATTT+TGG - chr2_3:51863450-51863469 Msa0297950:intron 25.0%
! TGGAAAATCATATTTAGCTA+AGG - chr2_3:51863945-51863964 Msa0297950:intron 25.0%
!! ACAATTTTACCTGAAAAATG+TGG + chr2_3:51863992-51864011 None:intergenic 25.0%
! AATGAAATCATATTCTCAAG+TGG - chr2_3:51864100-51864119 Msa0297950:intron 25.0%
!!! TTATTTAGGTTTTTGGCATT+TGG + chr2_3:51864262-51864281 None:intergenic 25.0%
! AAAATGAACATGATGTATCT+TGG - chr2_3:51864419-51864438 Msa0297950:CDS 25.0%
!!! TTTTTTTGACGAATAAAGCA+TGG + chr2_3:51864578-51864597 None:intergenic 25.0%
! TCATCAACAAATATGATAGA+GGG + chr2_3:51864811-51864830 None:intergenic 25.0%
! TTCATCAACAAATATGATAG+AGG + chr2_3:51864812-51864831 None:intergenic 25.0%
! AACATTGTAATCAGTTTAGT+TGG - chr2_3:51864950-51864969 Msa0297950:intron 25.0%
! CAGTTATATAGTGTAATATG+TGG - chr2_3:51865007-51865026 Msa0297950:intron 25.0%
! AGCATTAATTACGAATTAAC+AGG + chr2_3:51865270-51865289 None:intergenic 25.0%
!!! GTTTTTGTAGGCATTTTTTT+AGG + chr2_3:51865477-51865496 None:intergenic 25.0%
! CAATATACTAATAAGAAGCA+AGG + chr2_3:51865613-51865632 None:intergenic 25.0%
! CTTGCTTCTTATTAGTATAT+TGG - chr2_3:51865611-51865630 Msa0297950:intron 25.0%
! AATGATGTAAATATTAGCGA+TGG + chr2_3:51865752-51865771 None:intergenic 25.0%
! ATCGCTAATATTTACATCAT+TGG - chr2_3:51865751-51865770 Msa0297950:intron 25.0%
!!! AGAATTATTTTTGTCTTACC+TGG + chr2_3:51866002-51866021 None:intergenic 25.0%
! TCTAATCAATTTGTATTTGC+AGG - chr2_3:51866061-51866080 Msa0297950:intron 25.0%
! TCCTCATAATTTAACTGAAA+AGG - chr2_3:51866284-51866303 Msa0297950:intron 25.0%
!! TCCTTTTCAGTTAAATTATG+AGG + chr2_3:51866288-51866307 None:intergenic 25.0%
! TGAAAAGGATTATGAATACT+TGG - chr2_3:51866299-51866318 Msa0297950:intron 25.0%
! AAGAAATTCATCCAAGTAAA+AGG + chr2_3:51866408-51866427 None:intergenic 25.0%
! ACATATCTTTAATTGACATG+AGG - chr2_3:51866701-51866720 Msa0297950:CDS 25.0%
! TCAAAATCTGTTCTTGTAAT+GGG + chr2_3:51866769-51866788 None:intergenic 25.0%
! TTCAAAATCTGTTCTTGTAA+TGG + chr2_3:51866770-51866789 None:intergenic 25.0%
!!! TACAAGAACAGATTTTGAAA+AGG - chr2_3:51866771-51866790 Msa0297950:CDS 25.0%
!!! TCCTTTTTATGTTATTTTCG+GGG - chr2_3:51866975-51866994 Msa0297950:CDS 25.0%
TGAAAATTGAAAATTGAGGG+AGG + chr2_3:51862101-51862120 None:intergenic 30.0%
AACGATGTATAGCAATTTCA+AGG - chr2_3:51862155-51862174 Msa0297950:CDS 30.0%
! AAACGCTTTTGAATAGTTTC+CGG + chr2_3:51862226-51862245 None:intergenic 30.0%
! TCTAAAGCGTTCATGTATAA+AGG + chr2_3:51862249-51862268 None:intergenic 30.0%
! GTAATTGCTTCTCTGATTTT+AGG + chr2_3:51862306-51862325 None:intergenic 30.0%
GTTGAATTCTGCGATTATTA+GGG - chr2_3:51862518-51862537 Msa0297950:intron 30.0%
AAAAATTGAGGAAACTTGAC+AGG + chr2_3:51862621-51862640 None:intergenic 30.0%
!!! TTTCCTCAATTTTTTACTGG+TGG - chr2_3:51862627-51862646 Msa0297950:CDS 30.0%
!!! TTCCTCAATTTTTTACTGGT+GGG - chr2_3:51862628-51862647 Msa0297950:CDS 30.0%
ATTATTGTCTTTGTCGTGTT+TGG - chr2_3:51862660-51862679 Msa0297950:CDS 30.0%
TAGTTCAATCCATATCGAAA+TGG - chr2_3:51863183-51863202 Msa0297950:CDS 30.0%
TGTCTATATTGTGATTGTGT+TGG - chr2_3:51863229-51863248 Msa0297950:intron 30.0%
! CAATTAATTGAAGGTGTGTT+TGG + chr2_3:51863266-51863285 None:intergenic 30.0%
CTGACACTTCAATTAATTGA+AGG + chr2_3:51863275-51863294 None:intergenic 30.0%
!!! GATTGTGTTTGTGTCTTTTT+TGG - chr2_3:51863397-51863416 Msa0297950:intron 30.0%
AAGATTGGATATCAATACCA+AGG - chr2_3:51863430-51863449 Msa0297950:intron 30.0%
!!! CATATTGATTTTGGTATGCA+AGG - chr2_3:51863459-51863478 Msa0297950:intron 30.0%
!! AGTTGGCAAGTTTGTTAATT+TGG - chr2_3:51863502-51863521 Msa0297950:intron 30.0%
! CATGTTTTCAATGTTTTGTG+CGG - chr2_3:51863655-51863674 Msa0297950:intron 30.0%
!! AAAACTTTGAAACCATGAAG+TGG - chr2_3:51863698-51863717 Msa0297950:intron 30.0%
AGCGAAAGCAAGATTATATT+GGG - chr2_3:51863762-51863781 Msa0297950:intron 30.0%
ATCGAATGTGTATAGTTATG+TGG - chr2_3:51863830-51863849 Msa0297950:intron 30.0%
! AAATATGATTTTCCAGTTCC+AGG + chr2_3:51863940-51863959 None:intergenic 30.0%
GAGAATATGATTTCATTCCA+AGG + chr2_3:51864097-51864116 None:intergenic 30.0%
TACTTAAATACCAAATGGCT+AGG + chr2_3:51864214-51864233 None:intergenic 30.0%
AATTATGATGTATGTTGCTC+TGG - chr2_3:51864467-51864486 Msa0297950:intron 30.0%
ATTATGATGTATGTTGCTCT+GGG - chr2_3:51864468-51864487 Msa0297950:intron 30.0%
GAATAAAGCATGGAAAATTG+AGG + chr2_3:51864568-51864587 None:intergenic 30.0%
TTATGAATTAGGCACATAAG+TGG - chr2_3:51864654-51864673 Msa0297950:intron 30.0%
AAGATCTGATGAAGAAATAC+TGG + chr2_3:51864719-51864738 None:intergenic 30.0%
!!! GGTTTCAAACCTTTTTCAAA+TGG - chr2_3:51864771-51864790 Msa0297950:intron 30.0%
ATCAACAAATATGATAGAGG+GGG + chr2_3:51864809-51864828 None:intergenic 30.0%
CATCAACAAATATGATAGAG+GGG + chr2_3:51864810-51864829 None:intergenic 30.0%
!!! CAGGTAATAGCTTTATGTTT+TGG - chr2_3:51864916-51864935 Msa0297950:intron 30.0%
ATACAAGCATGCACTTAAAT+GGG + chr2_3:51865134-51865153 None:intergenic 30.0%
AATACAAGCATGCACTTAAA+TGG + chr2_3:51865135-51865154 None:intergenic 30.0%
AGACTGACAAATAAAAACCA+AGG + chr2_3:51865192-51865211 None:intergenic 30.0%
! GCTTTTCAATTTCAAGAACT+TGG - chr2_3:51865221-51865240 Msa0297950:CDS 30.0%
TTTCAATTTCAAGAACTTGG+AGG - chr2_3:51865224-51865243 Msa0297950:CDS 30.0%
TATGTTGGAGTAGAAAATGT+TGG - chr2_3:51865299-51865318 Msa0297950:intron 30.0%
ATGTTGGAGTAGAAAATGTT+GGG - chr2_3:51865300-51865319 Msa0297950:intron 30.0%
!!! AAGGCTTAGTTTGTTTTTGT+AGG + chr2_3:51865489-51865508 None:intergenic 30.0%
! TGAATTTTTCTTGTCTTAGC+AGG - chr2_3:51865531-51865550 Msa0297950:intron 30.0%
TTCCTTTGTTCAGCATATTA+TGG - chr2_3:51865688-51865707 Msa0297950:intron 30.0%
! TCCTCTCTTACAATGTATTT+TGG - chr2_3:51865785-51865804 Msa0297950:intron 30.0%
! CCTCTCTTACAATGTATTTT+GGG - chr2_3:51865786-51865805 Msa0297950:intron 30.0%
AGTTTATCCACTCATATTGT+AGG - chr2_3:51865912-51865931 Msa0297950:intron 30.0%
GTTTATCCACTCATATTGTA+GGG - chr2_3:51865913-51865932 Msa0297950:intron 30.0%
ATTTGTATTTGCAGGCAATA+AGG - chr2_3:51866069-51866088 Msa0297950:intron 30.0%
! TTTTTAATCTCTTCAGGTGA+AGG - chr2_3:51866436-51866455 Msa0297950:intron 30.0%
AAAGAAGAACATAGCATCTT+GGG + chr2_3:51866489-51866508 None:intergenic 30.0%
TAAAGAAGAACATAGCATCT+TGG + chr2_3:51866490-51866509 None:intergenic 30.0%
! CGAGATACTATAGATTTTGA+TGG - chr2_3:51866613-51866632 Msa0297950:CDS 30.0%
!!! ATCTGCATAAGTTTTAAGGT+AGG + chr2_3:51866736-51866755 None:intergenic 30.0%
! AAGGATCTGCATAAGTTTTA+AGG + chr2_3:51866740-51866759 None:intergenic 30.0%
AAAATCTGTTCTTGTAATGG+GGG + chr2_3:51866767-51866786 None:intergenic 30.0%
CAAAATCTGTTCTTGTAATG+GGG + chr2_3:51866768-51866787 None:intergenic 30.0%
!! ATTTTGAAAAGGTTCTTGCT+AGG - chr2_3:51866782-51866801 Msa0297950:CDS 30.0%
TCCCCGAAAATAACATAAAA+AGG + chr2_3:51866979-51866998 None:intergenic 30.0%
! TAGAAAACTAACTTGTGTCA+TGG - chr2_3:51867092-51867111 Msa0297950:five_prime_UTR 30.0%
ACTGAATTCATTAAAGATGC+TGG - chr2_3:51867243-51867262 Msa0297950:five_prime_UTR 30.0%
AAATAAGGGAGGAAGAAAAG+GGG + chr2_3:51862012-51862031 None:intergenic 35.0%
GAAATAAGGGAGGAAGAAAA+GGG + chr2_3:51862013-51862032 None:intergenic 35.0%
ATCATCTTCCCCAATTTCTA+GGG - chr2_3:51862049-51862068 Msa0297950:CDS 35.0%
AAAGGGAAACCCTAGAAATT+GGG + chr2_3:51862061-51862080 None:intergenic 35.0%
AAAAGGGAAACCCTAGAAAT+TGG + chr2_3:51862062-51862081 None:intergenic 35.0%
GGTTGAATTCTGCGATTATT+AGG - chr2_3:51862517-51862536 Msa0297950:intron 35.0%
ACATCATTCCACTTCACATT+CGG + chr2_3:51862549-51862568 None:intergenic 35.0%
AACCCACCAGTAAAAAATTG+AGG + chr2_3:51862633-51862652 None:intergenic 35.0%
!!! TCAATTTTTTACTGGTGGGT+TGG - chr2_3:51862632-51862651 Msa0297950:CDS 35.0%
CTTTGTCGTGTTTGGATAAA+CGG - chr2_3:51862668-51862687 Msa0297950:CDS 35.0%
TAAGCAGTTATCGTGCATAT+AGG + chr2_3:51862706-51862725 None:intergenic 35.0%
AGGTTCGTTATTCCTTAAGT+GGG + chr2_3:51863087-51863106 None:intergenic 35.0%
TAGGTTCGTTATTCCTTAAG+TGG + chr2_3:51863088-51863107 None:intergenic 35.0%
TGTGAGGGTTTATATAGGAT+TGG - chr2_3:51863121-51863140 Msa0297950:intron 35.0%
GTGAGGGTTTATATAGGATT+GGG - chr2_3:51863122-51863141 Msa0297950:intron 35.0%
!!! TGTGTTTGTGTCTTTTTTGG+AGG - chr2_3:51863400-51863419 Msa0297950:intron 35.0%
!!! TTTGTGTCTTTTTTGGAGGA+GGG - chr2_3:51863404-51863423 Msa0297950:intron 35.0%
! AGCTTTTCACAGTTGAAAGT+TGG - chr2_3:51863485-51863504 Msa0297950:intron 35.0%
GAGCGAAAGCAAGATTATAT+TGG - chr2_3:51863761-51863780 Msa0297950:intron 35.0%
AATGTTTACTATGCTTCCTG+CGG - chr2_3:51863863-51863882 Msa0297950:intron 35.0%
TACAACAAAAATGCTCTCCA+TGG + chr2_3:51863910-51863929 None:intergenic 35.0%
!!! TGGAGAGCATTTTTGTTGTA+TGG - chr2_3:51863910-51863929 Msa0297950:intron 35.0%
CAAGGATAATCCTTGTAATC+AGG + chr2_3:51864079-51864098 None:intergenic 35.0%
CTGATTACAAGGATTATCCT+TGG - chr2_3:51864077-51864096 Msa0297950:intron 35.0%
GGCATTAAAATTTGAACTGC+AGG - chr2_3:51864166-51864185 Msa0297950:intron 35.0%
AAGCATGGAAAATTGAGGTA+TGG + chr2_3:51864563-51864582 None:intergenic 35.0%
! CATCAGATCTTGTTTCAAAG+TGG - chr2_3:51864728-51864747 Msa0297950:intron 35.0%
! AGATCTTGTTTCAAAGTGGA+TGG - chr2_3:51864732-51864751 Msa0297950:intron 35.0%
! GATCTTGTTTCAAAGTGGAT+GGG - chr2_3:51864733-51864752 Msa0297950:intron 35.0%
TTTCTCGAGCCATTTGAAAA+AGG + chr2_3:51864783-51864802 None:intergenic 35.0%
GATGAAATAGATTCCCTATG+TGG - chr2_3:51864826-51864845 Msa0297950:intron 35.0%
ACGAATCAAAACAGAACTTC+TGG - chr2_3:51864885-51864904 Msa0297950:intron 35.0%
TAAGTGCATGCTTGTATTTG+TGG - chr2_3:51865137-51865156 Msa0297950:intron 35.0%
TTTGTTTCATATCTCGCACT+TGG + chr2_3:51865329-51865348 None:intergenic 35.0%
GAAACAAAGAAGTTCCACAT+CGG - chr2_3:51865341-51865360 Msa0297950:intron 35.0%
!! TAGTTTGTTATTAGCCGATG+TGG + chr2_3:51865358-51865377 None:intergenic 35.0%
TGAAGAATACACAATGCAAG+TGG - chr2_3:51865380-51865399 Msa0297950:intron 35.0%
CCTTAAGAAGTTGGGTTAAT+GGG + chr2_3:51865416-51865435 None:intergenic 35.0%
ACCTTAAGAAGTTGGGTTAA+TGG + chr2_3:51865417-51865436 None:intergenic 35.0%
! AACCCAACTTCTTAAGGTTT+TGG - chr2_3:51865419-51865438 Msa0297950:intron 35.0%
! ACCCAACTTCTTAAGGTTTT+GGG - chr2_3:51865420-51865439 Msa0297950:intron 35.0%
TCCCAAAACCTTAAGAAGTT+GGG + chr2_3:51865424-51865443 None:intergenic 35.0%
TTCCCAAAACCTTAAGAAGT+TGG + chr2_3:51865425-51865444 None:intergenic 35.0%
!!! TAAGGTTTTGGGAACAAATG+TGG - chr2_3:51865431-51865450 Msa0297950:intron 35.0%
GACCATAATATGCTGAACAA+AGG + chr2_3:51865693-51865712 None:intergenic 35.0%
AGCATATTATGGTCTGTTGT+TGG - chr2_3:51865699-51865718 Msa0297950:intron 35.0%
CCCAAAATACATTGTAAGAG+AGG + chr2_3:51865789-51865808 None:intergenic 35.0%
TATTCCACTACCAGATTTGA+AGG - chr2_3:51866115-51866134 Msa0297950:intron 35.0%
ACACGTTAAAACCATTTGCT+AGG + chr2_3:51866214-51866233 None:intergenic 35.0%
!! TTTGGCTTGATAAATTGAGC+AGG - chr2_3:51866245-51866264 Msa0297950:intron 35.0%
ATTATGAATACTTGGCTAGC+AGG - chr2_3:51866307-51866326 Msa0297950:intron 35.0%
AAGTAAAAGGCGATTGAAAC+AGG + chr2_3:51866395-51866414 None:intergenic 35.0%
! TGTTTCAATCGCCTTTTACT+TGG - chr2_3:51866394-51866413 Msa0297950:intron 35.0%
! TTCTTCTTTAAGAGTCCTGA+GGG - chr2_3:51866500-51866519 Msa0297950:intron 35.0%
! TACAAAAGGACTTGCTTCAA+AGG - chr2_3:51866586-51866605 Msa0297950:CDS 35.0%
!! CTATAGATTTTGATGGCTGT+TGG - chr2_3:51866620-51866639 Msa0297950:CDS 35.0%
! AAATCTGTTCTTGTAATGGG+GGG + chr2_3:51866766-51866785 None:intergenic 35.0%
TGAATCTCTCATGAACTTCA+AGG + chr2_3:51866834-51866853 None:intergenic 35.0%
AGTTCATGAGAGATTCACAA+AGG - chr2_3:51866837-51866856 Msa0297950:CDS 35.0%
! AAAACTAACTTGTGTCATGG+TGG - chr2_3:51867095-51867114 Msa0297950:five_prime_UTR 35.0%
AGAAAAGGGGAAAGATGGAT+TGG + chr2_3:51861999-51862018 None:intergenic 40.0%
GGAAATAAGGGAGGAAGAAA+AGG + chr2_3:51862014-51862033 None:intergenic 40.0%
GGTGATCTGATCGGAAATAA+GGG + chr2_3:51862026-51862045 None:intergenic 40.0%
TGGTGATCTGATCGGAAATA+AGG + chr2_3:51862027-51862046 None:intergenic 40.0%
CTAGAAATTGGGGAAGATGA+TGG + chr2_3:51862050-51862069 None:intergenic 40.0%
CATCATCTTCCCCAATTTCT+AGG - chr2_3:51862048-51862067 Msa0297950:CDS 40.0%
AAGGGAAACCCTAGAAATTG+GGG + chr2_3:51862060-51862079 None:intergenic 40.0%
TGAAGTGGAATGATGTTGCT+GGG - chr2_3:51862553-51862572 Msa0297950:intron 40.0%
GCTCTTACAAATAGTCTCGT+AGG - chr2_3:51862859-51862878 Msa0297950:CDS 40.0%
CTATATCGACCCTTGTTCTA+TGG - chr2_3:51862917-51862936 Msa0297950:intron 40.0%
GTTTGTGCTCCATAGAACAA+GGG + chr2_3:51862929-51862948 None:intergenic 40.0%
TGTTTGTGCTCCATAGAACA+AGG + chr2_3:51862930-51862949 None:intergenic 40.0%
! TTTACCGGTGTTAATGTGCA+AGG - chr2_3:51863035-51863054 Msa0297950:CDS 40.0%
CTTAAGTGGGACTCTAAGTT+GGG + chr2_3:51863074-51863093 None:intergenic 40.0%
TAATCATGAACCTCGTGTGA+GGG - chr2_3:51863106-51863125 Msa0297950:intron 40.0%
TCAAAAACCATGGCTGAAAG+GGG + chr2_3:51863155-51863174 None:intergenic 40.0%
CTCAAAAACCATGGCTGAAA+GGG + chr2_3:51863156-51863175 None:intergenic 40.0%
! CTTTCAGCCATGGTTTTTGA+GGG - chr2_3:51863155-51863174 Msa0297950:intron 40.0%
!! TTTCAGCCATGGTTTTTGAG+GGG - chr2_3:51863156-51863175 Msa0297950:intron 40.0%
CAGTCACTTCCATTTCGATA+TGG + chr2_3:51863195-51863214 None:intergenic 40.0%
!!! GTTTGTGTCTTTTTTGGAGG+AGG - chr2_3:51863403-51863422 Msa0297950:intron 40.0%
!!! TTGTGTCTTTTTTGGAGGAG+GGG - chr2_3:51863405-51863424 Msa0297950:intron 40.0%
! TTTCAGGTAAAAGACGACCA+TGG - chr2_3:51863890-51863909 Msa0297950:intron 40.0%
!! TTTTTGTTGTATGGACCTCC+TGG - chr2_3:51863919-51863938 Msa0297950:intron 40.0%
! TATGATTTTCCAGTTCCAGG+AGG + chr2_3:51863937-51863956 None:intergenic 40.0%
!! AGGCTGATTCCACATTTTTC+AGG - chr2_3:51863980-51863999 Msa0297950:intron 40.0%
TAGGAACTTGCCTGATTACA+AGG - chr2_3:51864066-51864085 Msa0297950:intron 40.0%
TGCATTGCTTGCTCTCTTAA+AGG - chr2_3:51864145-51864164 Msa0297950:intron 40.0%
CTGCAGGTAAGCAATTTCTT+AGG - chr2_3:51864182-51864201 Msa0297950:intron 40.0%
!! TTTCCATAGGACTTGCTGTT+AGG + chr2_3:51864295-51864314 None:intergenic 40.0%
GATGGGTGAAAGTGAAAAAC+TGG - chr2_3:51864750-51864769 Msa0297950:intron 40.0%
! TTTCAAGAACTTGGAGGTGT+CGG - chr2_3:51865230-51865249 Msa0297950:CDS 40.0%
AGAAGTTGGGTTAATGGGAT+GGG + chr2_3:51865411-51865430 None:intergenic 40.0%
AAGAAGTTGGGTTAATGGGA+TGG + chr2_3:51865412-51865431 None:intergenic 40.0%
CCCATTAACCCAACTTCTTA+AGG - chr2_3:51865413-51865432 Msa0297950:intron 40.0%
! TTTTCTTGTCTTAGCAGGAG+AGG - chr2_3:51865536-51865555 Msa0297950:intron 40.0%
ATTGCCCAATTCCACTACTA+TGG + chr2_3:51865567-51865586 None:intergenic 40.0%
! AGGAAAGCATGGAACTATGA+TGG + chr2_3:51865673-51865692 None:intergenic 40.0%
ATGCTGAACAAAGGAAAGCA+TGG + chr2_3:51865684-51865703 None:intergenic 40.0%
AATATTAGCGATGGCGACTA+CGG + chr2_3:51865743-51865762 None:intergenic 40.0%
TTTGTTCCTAGCATTGCTGT+AGG - chr2_3:51865836-51865855 Msa0297950:intron 40.0%
CTGCAAGAACAAGAACTTTC+TGG + chr2_3:51865954-51865973 None:intergenic 40.0%
! CTTACCTGGTCTAAAGCATA+AGG + chr2_3:51865988-51866007 None:intergenic 40.0%
TTGCCTTAAACATGTGTTGG+CGG + chr2_3:51866142-51866161 None:intergenic 40.0%
! CCAACACATGTTTAAGGCAA+GGG - chr2_3:51866142-51866161 Msa0297950:intron 40.0%
TAAATTGAGCAGGTGCATCT+TGG - chr2_3:51866255-51866274 Msa0297950:intron 40.0%
! ACATAGCATCTTGGGTTTTG+CGG + chr2_3:51866481-51866500 None:intergenic 40.0%
! GTTCTTCTTTAAGAGTCCTG+AGG - chr2_3:51866499-51866518 Msa0297950:intron 40.0%
CGCAGTTCAAACTACAATGA+CGG - chr2_3:51866556-51866575 Msa0297950:CDS 40.0%
!! ATGACGGATCTTGCTACAAA+AGG - chr2_3:51866572-51866591 Msa0297950:CDS 40.0%
!! GGTTGTGATATTTTTCGACG+AGG - chr2_3:51866671-51866690 Msa0297950:CDS 40.0%
AAAAGGTTCTTGCTAGGCAA+AGG - chr2_3:51866788-51866807 Msa0297950:CDS 40.0%
!!! AGGTCACTTTTGCTTACTGT+AGG + chr2_3:51866814-51866833 None:intergenic 40.0%
GAGAGATTCACAAAGGAGTT+TGG - chr2_3:51866844-51866863 Msa0297950:CDS 40.0%
ACAAAGGAGTTTGGAGAAGA+AGG - chr2_3:51866853-51866872 Msa0297950:CDS 40.0%
TAAATCAACCTCCGCACAAT+CGG + chr2_3:51867012-51867031 None:intergenic 40.0%
! CGGAGGTTGATTTATTACGA+TGG - chr2_3:51867018-51867037 Msa0297950:five_prime_UTR 40.0%
GAGGAAGAAAAGGGGAAAGA+TGG + chr2_3:51862004-51862023 None:intergenic 45.0%
GATCTGATCGGAAATAAGGG+AGG + chr2_3:51862023-51862042 None:intergenic 45.0%
!! GATGATGGTGGTGATCTGAT+CGG + chr2_3:51862035-51862054 None:intergenic 45.0%
! GAAATTGGGGAAGATGATGG+TGG + chr2_3:51862047-51862066 None:intergenic 45.0%
CTCAGCACGACGTAAATACT+CGG + chr2_3:51862340-51862359 None:intergenic 45.0%
GTGAAGTGGAATGATGTTGC+TGG - chr2_3:51862552-51862571 Msa0297950:intron 45.0%
CCTTAAGTGGGACTCTAAGT+TGG + chr2_3:51863075-51863094 None:intergenic 45.0%
CCAACTTAGAGTCCCACTTA+AGG - chr2_3:51863072-51863091 Msa0297950:CDS 45.0%
CTCACACGAGGTTCATGATT+AGG + chr2_3:51863107-51863126 None:intergenic 45.0%
CTAATCATGAACCTCGTGTG+AGG - chr2_3:51863105-51863124 Msa0297950:intron 45.0%
CCTATATAAACCCTCACACG+AGG + chr2_3:51863119-51863138 None:intergenic 45.0%
CCTCGTGTGAGGGTTTATAT+AGG - chr2_3:51863116-51863135 Msa0297950:intron 45.0%
CCTCAAAAACCATGGCTGAA+AGG + chr2_3:51863157-51863176 None:intergenic 45.0%
! CCTTTCAGCCATGGTTTTTG+AGG - chr2_3:51863154-51863173 Msa0297950:intron 45.0%
!! TTCAGCCATGGTTTTTGAGG+GGG - chr2_3:51863157-51863176 Msa0297950:intron 45.0%
TAACTCCCCCTCAAAAACCA+TGG + chr2_3:51863165-51863184 None:intergenic 45.0%
TTTGGAGGAGGGGATAAGAT+TGG - chr2_3:51863415-51863434 Msa0297950:intron 45.0%
TTTGTGCGGAGAACTCTACA+AGG - chr2_3:51863669-51863688 Msa0297950:intron 45.0%
! GGTCGTCTTTTACCTGAAAG+AGG + chr2_3:51863889-51863908 None:intergenic 45.0%
TAGGACTTTGCCTAGCCATT+TGG - chr2_3:51864201-51864220 Msa0297950:intron 45.0%
!! TTTGGCATTTGGTGCAGTTG+CGG + chr2_3:51864251-51864270 None:intergenic 45.0%
AGTCCTAACAGCAAGTCCTA+TGG - chr2_3:51864289-51864308 Msa0297950:CDS 45.0%
! GAGATTGAGCTGTTTCATGC+TGG - chr2_3:51865587-51865606 Msa0297950:intron 45.0%
TTGGAACCTACAGCAATGCT+AGG + chr2_3:51865845-51865864 None:intergenic 45.0%
CCTACACCCTACAATATGAG+TGG + chr2_3:51865922-51865941 None:intergenic 45.0%
CCACTCATATTGTAGGGTGT+AGG - chr2_3:51865919-51865938 Msa0297950:intron 45.0%
! CACACCTTATGCTTTAGACC+AGG - chr2_3:51865981-51866000 Msa0297950:intron 45.0%
!! TAGCTTCCTGCTGACTCTAT+GGG + chr2_3:51866036-51866055 None:intergenic 45.0%
!! ATAGCTTCCTGCTGACTCTA+TGG + chr2_3:51866037-51866056 None:intergenic 45.0%
! TGCCTTAAACATGTGTTGGC+GGG + chr2_3:51866141-51866160 None:intergenic 45.0%
! GCCAACACATGTTTAAGGCA+AGG - chr2_3:51866141-51866160 Msa0297950:intron 45.0%
CCCTTGCCTTAAACATGTGT+TGG + chr2_3:51866145-51866164 None:intergenic 45.0%
! TTAAGAGTCCTGAGGGTATG+TGG - chr2_3:51866507-51866526 Msa0297950:intron 45.0%
ATGTGAAGTTCCCGATTGTG+CGG - chr2_3:51866998-51867017 Msa0297950:exon 45.0%
AAATCAACCTCCGCACAATC+GGG + chr2_3:51867011-51867030 None:intergenic 45.0%
GTCATGGTGGTTGCTTATGT+TGG - chr2_3:51867108-51867127 Msa0297950:five_prime_UTR 45.0%
TCCGGCATTGTCTTCGTGTA+CGG + chr2_3:51862208-51862227 None:intergenic 50.0%
CGAGTATTTACGTCGTGCTG+AGG - chr2_3:51862338-51862357 Msa0297950:CDS 50.0%
ATCAGGGCTGTGCTTGATGA+CGG - chr2_3:51862363-51862382 Msa0297950:CDS 50.0%
CCATCCTTCCCCTTACTCTT+CGG + chr2_3:51862435-51862454 None:intergenic 50.0%
AAGAGTAAGGGGAAGGATGG+TGG - chr2_3:51862435-51862454 Msa0297950:intron 50.0%
GGGAAAAGCCGAATGTGAAG+TGG - chr2_3:51862538-51862557 Msa0297950:intron 50.0%
GTGGAATGATGTTGCTGGGT+TGG - chr2_3:51862557-51862576 Msa0297950:intron 50.0%
!! TGGGTTGGAGAGTGCTAAAC+AGG - chr2_3:51862572-51862591 Msa0297950:CDS 50.0%
GAGTGCTAAACAGGCTTTGC+AGG - chr2_3:51862581-51862600 Msa0297950:CDS 50.0%
! ACCGGTGTTAATGTGCAAGG+AGG - chr2_3:51863038-51863057 Msa0297950:CDS 50.0%
CCCTCCTTGCACATTAACAC+CGG + chr2_3:51863042-51863061 None:intergenic 50.0%
! CCGGTGTTAATGTGCAAGGA+GGG - chr2_3:51863039-51863058 Msa0297950:CDS 50.0%
AAAACCATGGCTGAAAGGGG+AGG + chr2_3:51863152-51863171 None:intergenic 50.0%
ACCATGAAGTGGCTGTTCTC+TGG - chr2_3:51863709-51863728 Msa0297950:intron 50.0%
TCCAGAGAACAGCCACTTCA+TGG + chr2_3:51863713-51863732 None:intergenic 50.0%
! TTTTACCTGAAAGAGGCCGC+AGG + chr2_3:51863882-51863901 None:intergenic 50.0%
TTGTATGGACCTCCTGGAAC+TGG - chr2_3:51863925-51863944 Msa0297950:intron 50.0%
AGCTAAGGCAGTTGCAACTG+AGG - chr2_3:51863960-51863979 Msa0297950:intron 50.0%
AGAACTTCTGGTGCAGATGC+AGG - chr2_3:51864897-51864916 Msa0297950:intron 50.0%
CCAATTCCACTACTATGGCC+CGG + chr2_3:51865562-51865581 None:intergenic 50.0%
! CGGGCCATAGTAGTGGAATT+GGG - chr2_3:51865560-51865579 Msa0297950:intron 50.0%
TATCACCCCATAGAGTCAGC+AGG - chr2_3:51866027-51866046 Msa0297950:intron 50.0%
!! AGCTTCCTGCTGACTCTATG+GGG + chr2_3:51866035-51866054 None:intergenic 50.0%
ATACTTGGCTAGCAGGACAG+AGG - chr2_3:51866314-51866333 Msa0297950:intron 50.0%
TACTTGGCTAGCAGGACAGA+GGG - chr2_3:51866315-51866334 Msa0297950:intron 50.0%
!! CCTGTTGCTTTGGTCCACAT+GGG + chr2_3:51866535-51866554 None:intergenic 50.0%
CCATGTGGACCAAAGCAACA+GGG - chr2_3:51866533-51866552 Msa0297950:CDS 50.0%
! TTCTTGTAATGGGGGGTGGA+AGG + chr2_3:51866759-51866778 None:intergenic 50.0%
! TCTGTTCTTGTAATGGGGGG+TGG + chr2_3:51866763-51866782 None:intergenic 50.0%
GCCGTACACGAAGACAATGC+CGG - chr2_3:51862204-51862223 Msa0297950:intron 55.0%
TACGTCGTGCTGAGGAGATC+AGG - chr2_3:51862346-51862365 Msa0297950:CDS 55.0%
ACGTCGTGCTGAGGAGATCA+GGG - chr2_3:51862347-51862366 Msa0297950:CDS 55.0%
AGCTTCTAATGGCGATGCCG+CGG - chr2_3:51862398-51862417 Msa0297950:CDS 55.0%
TGCTACGAGGCCGAAGAGTA+AGG - chr2_3:51862422-51862441 Msa0297950:intron 55.0%
GCTACGAGGCCGAAGAGTAA+GGG - chr2_3:51862423-51862442 Msa0297950:intron 55.0%
CTACGAGGCCGAAGAGTAAG+GGG - chr2_3:51862424-51862443 Msa0297950:intron 55.0%
CCGAAGAGTAAGGGGAAGGA+TGG - chr2_3:51862432-51862451 Msa0297950:intron 55.0%
! AGTAAGGGGAAGGATGGTGG+TGG - chr2_3:51862438-51862457 Msa0297950:intron 55.0%
! GTAAGGGGAAGGATGGTGGT+GGG - chr2_3:51862439-51862458 Msa0297950:intron 55.0%
! TAAGGGGAAGGATGGTGGTG+GGG - chr2_3:51862440-51862459 Msa0297950:intron 55.0%
AGGTGGTGAAGGAGAGGATC+CGG - chr2_3:51862473-51862492 Msa0297950:intron 55.0%
CAATCCTCCCCTTTCAGCCA+TGG - chr2_3:51863145-51863164 Msa0297950:intron 55.0%
TTCTCCACGCTGGCCACATA+GGG + chr2_3:51864842-51864861 None:intergenic 55.0%
TCTCATTGCCTTCTCCACGC+TGG + chr2_3:51864852-51864871 None:intergenic 55.0%
CTTGTCTTAGCAGGAGAGGC+CGG - chr2_3:51865540-51865559 Msa0297950:intron 55.0%
TTGTCTTAGCAGGAGAGGCC+GGG - chr2_3:51865541-51865560 Msa0297950:intron 55.0%
! CCGGGCCATAGTAGTGGAAT+TGG - chr2_3:51865559-51865578 Msa0297950:intron 55.0%
CGGGCCTTCAAATCTGGTAG+TGG + chr2_3:51866122-51866141 None:intergenic 55.0%
! TGTTGGCGGGCCTTCAAATC+TGG + chr2_3:51866128-51866147 None:intergenic 55.0%
GGCCCGCCAACACATGTTTA+AGG - chr2_3:51866136-51866155 Msa0297950:intron 55.0%
ACTTGGCTAGCAGGACAGAG+GGG - chr2_3:51866316-51866335 Msa0297950:intron 55.0%
! AGCAGGACAGAGGGGTTTTC+TGG - chr2_3:51866324-51866343 Msa0297950:intron 55.0%
! GCATCTTGGGTTTTGCGGAC+AGG + chr2_3:51866476-51866495 None:intergenic 55.0%
CATGGGATCCACATACCCTC+AGG + chr2_3:51866518-51866537 None:intergenic 55.0%
! GAGGGTATGTGGATCCCATG+TGG - chr2_3:51866518-51866537 Msa0297950:intron 55.0%
CCCATGTGGACCAAAGCAAC+AGG - chr2_3:51866532-51866551 Msa0297950:CDS 55.0%
!! CCCTGTTGCTTTGGTCCACA+TGG + chr2_3:51866536-51866555 None:intergenic 55.0%
! TGAACTGCGCCCTGTTGCTT+TGG + chr2_3:51866545-51866564 None:intergenic 55.0%
TGAAGTTCCCGATTGTGCGG+AGG - chr2_3:51867001-51867020 Msa0297950:exon 55.0%
!! AGGGCTGTGCTTGATGACGG+TGG - chr2_3:51862366-51862385 Msa0297950:CDS 60.0%
!! GGGCTGTGCTTGATGACGGT+GGG - chr2_3:51862367-51862386 Msa0297950:CDS 60.0%
!! TGCTTGATGACGGTGGGCCA+GGG - chr2_3:51862373-51862392 Msa0297950:CDS 60.0%
TCGCCATTAGAAGCTGGCCC+TGG + chr2_3:51862393-51862412 None:intergenic 60.0%
GCGGCATCGCCATTAGAAGC+TGG + chr2_3:51862399-51862418 None:intergenic 60.0%
GAGGCCGAAGAGTAAGGGGA+AGG - chr2_3:51862428-51862447 Msa0297950:intron 60.0%
TGGTGGAGGTGGTGAAGGAG+AGG - chr2_3:51862467-51862486 Msa0297950:intron 60.0%
TGAAGGAGAGGATCCGGAGC+AGG - chr2_3:51862479-51862498 Msa0297950:intron 60.0%
! GCTCTAAGCTTCGCCTGCTC+CGG + chr2_3:51862495-51862514 None:intergenic 60.0%
GGAGCAGGCGAAGCTTAGAG+CGG - chr2_3:51862494-51862513 Msa0297950:intron 60.0%
GAGCAGGCGAAGCTTAGAGC+GGG - chr2_3:51862495-51862514 Msa0297950:intron 60.0%
AGCAGGCGAAGCTTAGAGCG+GGG - chr2_3:51862496-51862515 Msa0297950:intron 60.0%
TGCTTCCTGCGGCCTCTTTC+AGG - chr2_3:51863874-51863893 Msa0297950:intron 60.0%
GATTCCCTATGTGGCCAGCG+TGG - chr2_3:51864835-51864854 Msa0297950:intron 60.0%
CTTCTCCACGCTGGCCACAT+AGG + chr2_3:51864843-51864862 None:intergenic 60.0%
CTATGTGGCCAGCGTGGAGA+AGG - chr2_3:51864841-51864860 Msa0297950:intron 60.0%
!! GTGCTTGATGACGGTGGGCC+AGG - chr2_3:51862372-51862391 Msa0297950:CDS 65.0%
GGGCCAGGGCCAGCTTCTAA+TGG - chr2_3:51862387-51862406 Msa0297950:CDS 65.0%
CTTCGGCCTCGTAGCAACCG+CGG + chr2_3:51862418-51862437 None:intergenic 65.0%
!! GGGAAGGATGGTGGTGGGGA+GGG - chr2_3:51862444-51862463 Msa0297950:intron 65.0%
!! AAGGATGGTGGTGGGGAGGG+TGG - chr2_3:51862447-51862466 Msa0297950:intron 65.0%
!! GAGGGTGGTGGAGGTGGTGA+AGG - chr2_3:51862462-51862481 Msa0297950:intron 65.0%
GAGAGGCCGGGCCATAGTAG+TGG - chr2_3:51865553-51865572 Msa0297950:intron 65.0%
GCGATGCCGCGGTTGCTACG+AGG - chr2_3:51862409-51862428 Msa0297950:intron 70.0%
!! GGGGAAGGATGGTGGTGGGG+AGG - chr2_3:51862443-51862462 Msa0297950:intron 70.0%
!! GATGGTGGTGGGGAGGGTGG+TGG - chr2_3:51862450-51862469 Msa0297950:intron 70.0%
!! GGTGGTGGGGAGGGTGGTGG+AGG - chr2_3:51862453-51862472 Msa0297950:intron 75.0%
!! GGTGGGGAGGGTGGTGGAGG+TGG - chr2_3:51862456-51862475 Msa0297950:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 51861906 51867269 51861906 ID=Msa0297950;Name=Msa0297950
chr2_3 mRNA 51861906 51867269 51861906 ID=Msa0297950-mRNA-1;Parent=Msa0297950;Name=Msa0297950-mRNA-1;_AED=0.15;_eAED=0.15;_QI=253|0.87|0.77|1|1|1|9|0|542
chr2_3 exon 51861906 51862222 51861906 ID=Msa0297950-mRNA-1:exon:16528;Parent=Msa0297950-mRNA-1
chr2_3 exon 51862301 51862421 51862301 ID=Msa0297950-mRNA-1:exon:16527;Parent=Msa0297950-mRNA-1
chr2_3 exon 51862568 51862723 51862568 ID=Msa0297950-mRNA-1:exon:16526;Parent=Msa0297950-mRNA-1
chr2_3 exon 51862810 51862908 51862810 ID=Msa0297950-mRNA-1:exon:16525;Parent=Msa0297950-mRNA-1
chr2_3 exon 51863018 51863092 51863018 ID=Msa0297950-mRNA-1:exon:16524;Parent=Msa0297950-mRNA-1
chr2_3 exon 51863173 51863241 51863173 ID=Msa0297950-mRNA-1:exon:16523;Parent=Msa0297950-mRNA-1
chr2_3 exon 51864257 51864455 51864257 ID=Msa0297950-mRNA-1:exon:16522;Parent=Msa0297950-mRNA-1
chr2_3 exon 51865174 51865279 51865174 ID=Msa0297950-mRNA-1:exon:16521;Parent=Msa0297950-mRNA-1
chr2_3 exon 51866530 51867269 51866530 ID=Msa0297950-mRNA-1:exon:16520;Parent=Msa0297950-mRNA-1
chr2_3 five_prime_UTR 51867017 51867269 51867017 ID=Msa0297950-mRNA-1:five_prime_utr;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51866530 51867016 51866530 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51865174 51865279 51865174 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51864257 51864455 51864257 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51863173 51863241 51863173 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51863018 51863092 51863018 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51862810 51862908 51862810 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51862568 51862723 51862568 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51862301 51862421 51862301 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
chr2_3 CDS 51861906 51862222 51861906 ID=Msa0297950-mRNA-1:cds;Parent=Msa0297950-mRNA-1
Gene Sequence

>Msa0297950

ATGTATAGCAATTTCAAGGAACAAGCAATAGAGTACGTGAAACAAGCCGTACACGAAGACAATGCCGGAAACTATTCAAAAGCGTTTCCTTTATACATGAACGCTTTAGAGTATTTCAAAACCCATTTAAAGTACGAAAAAAACCCTAAAATCAGAGAAGCAATTACGCAGAAATTCACCGAGTATTTACGTCGTGCTGAGGAGATCAGGGCTGTGCTTGATGACGGTGGGCCAGGGCCAGCTTCTAATGGCGATGCCGCGGTTGCTACGAGGCCGAAGAGTAAGGGGAAGGATGGTGGTGGGGAGGGTGGTGGAGGTGGTGAAGGAGAGGATCCGGAGCAGGCGAAGCTTAGAGCGGGGTTGAATTCTGCGATTATTAGGGAAAAGCCGAATGTGAAGTGGAATGATGTTGCTGGGTTGGAGAGTGCTAAACAGGCTTTGCAGGAAGCTGTTATTTTACCTGTCAAGTTTCCTCAATTTTTTACTGGTAAAAGACGACCATGGAGAGCATTTTTGTTGTATGGACCTCCTGGAACTGGAAAATCATATTTAGCTAAGGCAGTTGCAACTGAGGCTGATTCCACATTTTTCAGTATTTCTTCATCAGATCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAACTGGTTTCAAACCTTTTTCAAATGGCTCGAGAAAGTGCCCCCTCTATCATATTTGTTGATGAAATAGATTCCCTATGTGGCCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATCAAAACAGAACTTCTGGTGCAGATGCAGGGTGTAGGAAACAATGACCAGAAAGTTCTTGTTCTTGCAGCAACAAACACACCTTATGCTTTAGACCAGGCAATAAGGCGTCGTTTTGATAAGCGTATTTATATTCCACTACCAGATTTGAAGGCCCGCCAACACATGTTTAAGGTGCATCTTGGAGATACTCCTCATAATTTAACTGAAAAGGATTATGAATACTTGGCTAGCAGGACAGAGGGGTTTTCTGGTTCAGATATATCTGTTTGCGTGAAGGATGTTCTATTTGAACCTGTCCGCAAAACCCAAGATGCTATGTTCTTCTTTAAGAGTCCTGAGGGTATGTGGATCCCATGTGGACCAAAGCAACAGGGCGCAGTTCAAACTACAATGACGGATCTTGCTACAAAAGGACTTGCTTCAAAGATCCTTCCACCCCCCATTACAAGAACAGATTTTGAAAAGGTTCTTGCTAGGCAAAGGCCTACAGTAAGCAAAAGTGACCTTGAAGTTCATGAGAGATTCACAAAGGAGTTTGGAGAAGAAGTTATTGAATCAAGTGAAATGCATCCTTTTTATGTTATTTTCGGGGATGTGAAGTTCCCGATTGTGCGGAGGTTGATTTATTACGATGGATACTCTCATTTTGTTTCTCCTAAATTGTGTATATTTGAATCTGAAATGATTAGAAAACTAACTTGTGTCATGGTGGTTGCTTATGTTGGTATAGTGCTTGTGTTTTTCAGTTTTCAAAACGATGTTTCATCTTGTAAAAAAAGATGGATGATTCACGATATATTCAGTAGCTATGCTGCACTGAACTATGATATAAGACAAACTGAATTCATTAAAGATGCTGGTTAG
Protein sequence

>Msa0297950

MYSNFKEQAIEYVKQAVHEDNAGNYSKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKSKGKDGGGEGGGGGEGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARESAPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDYEYLASRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKSPEGMWIPCGPKQQGAVQTTMTDLATKGLASKILPPPITRTDFEKVLARQRPTVSKSDLEVHERFTKEFGEEVIESSEMHPFYVIFGDVKFPIVRRLIYYDGYSHFVSPKLCIFESEMIRKLTCVMVVAYVGIVLVFFSFQNDVSSCKKRWMIHDIFSSYAALNYDIRQTEFIKDAG*