Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619590 | XP_003630391.1 | 98.664 | 599 | 8 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619590 | sp|Q9STW5|MACP2_ARATH | 64.992 | 597 | 197 | 8 | 9 | 598 | 10 | 601 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619590 | G7LFS3 | 98.664 | 599 | 8 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1227 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038350 | Msa0619590 | 0.818753 | 1.662952e-52 | -8.615850e-47 |
| Msa0060350 | Msa0619590 | -0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0070810 | Msa0619590 | -0.810175 | 1.313611e-50 | -8.615850e-47 |
| Msa0073820 | Msa0619590 | -0.818379 | 2.021669e-52 | -8.615850e-47 |
| Msa0090040 | Msa0619590 | 0.805625 | 1.219307e-49 | -8.615850e-47 |
| Msa0094700 | Msa0619590 | -0.824336 | 8.530017e-54 | -8.615850e-47 |
| Msa0619590 | Msa0629500 | -0.809087 | 2.250001e-50 | -8.615850e-47 |
| Msa0619590 | Msa0659800 | 0.928638 | 2.175495e-92 | -8.615850e-47 |
| Msa0619590 | Msa0694690 | 0.852128 | 5.654565e-61 | -8.615850e-47 |
| Msa0619590 | Msa0738400 | 0.826807 | 2.214994e-54 | -8.615850e-47 |
| Msa0619590 | Msa0764020 | -0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0619590 | Msa0764790 | -0.801340 | 9.431787e-49 | -8.615850e-47 |
| Msa0619590 | Msa0843690 | -0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0619590 | Msa0881050 | -0.809586 | 1.758236e-50 | -8.615850e-47 |
| Msa0619590 | Msa0989490 | 0.808030 | 3.783922e-50 | -8.615850e-47 |
| Msa0619590 | Msa1011240 | -0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0619590 | Msa1067430 | -0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0619590 | Msa1080620 | -0.822015 | 2.970060e-53 | -8.615850e-47 |
| Msa0619590 | Msa1080690 | -0.822285 | 2.571295e-53 | -8.615850e-47 |
| Msa0619590 | Msa1171060 | 0.804625 | 1.974179e-49 | -8.615850e-47 |
| Msa0619590 | Msa1183390 | -0.803294 | 3.733351e-49 | -8.615850e-47 |
| Msa0619590 | Msa1188210 | -0.811566 | 6.565508e-51 | -8.615850e-47 |
| Msa0619590 | Msa1198870 | -0.811695 | 6.156518e-51 | -8.615850e-47 |
| Msa0619590 | Msa1222580 | -0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa0619590 | Msa1229050 | -0.809343 | 1.983314e-50 | -8.615850e-47 |
| Msa0619590 | Msa1234960 | -0.815963 | 7.061064e-52 | -8.615850e-47 |
| Msa0619590 | Msa1265820 | 0.805672 | 1.192151e-49 | -8.615850e-47 |
| Msa0619590 | Msa1271490 | -0.810789 | 9.680775e-51 | -8.615850e-47 |
| Msa0619590 | Msa1283770 | -0.811923 | 5.491095e-51 | -8.615850e-47 |
| Msa0619590 | Msa1293060 | -0.820530 | 6.533881e-53 | -8.615850e-47 |
| Msa0619590 | Msa1309360 | -0.816574 | 5.156801e-52 | -8.615850e-47 |
| Msa0619590 | Msa1322660 | -0.814976 | 1.171105e-51 | -8.615850e-47 |
| Msa0619590 | Msa1369900 | -0.810763 | 9.804091e-51 | -8.615850e-47 |
| Msa0619590 | Msa1374970 | -0.821362 | 4.203560e-53 | -8.615850e-47 |
| Msa0619590 | Msa1404370 | -0.802264 | 6.091369e-49 | -8.615850e-47 |
| Msa0619590 | Msa1406550 | -0.807934 | 3.965612e-50 | -8.615850e-47 |
| Msa0619590 | Msa1412520 | -0.813226 | 2.848986e-51 | -8.615850e-47 |
| Msa0619590 | Msa1415250 | -0.805219 | 1.483858e-49 | -8.615850e-47 |
| Msa0619590 | Msa1418600 | -0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa0619590 | Msa1422900 | -0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0619590 | Msa1430760 | -0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0132590 | Msa0619590 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0138410 | Msa0619590 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0140530 | Msa0619590 | 0.808176 | 3.522346e-50 | -8.615850e-47 |
| Msa0143980 | Msa0619590 | -0.809039 | 2.304491e-50 | -8.615850e-47 |
| Msa0171780 | Msa0619590 | -0.817828 | 2.692609e-52 | -8.615850e-47 |
| Msa0171930 | Msa0619590 | -0.824719 | 6.931395e-54 | -8.615850e-47 |
| Msa0175280 | Msa0619590 | -0.805175 | 1.515542e-49 | -8.615850e-47 |
| Msa0216810 | Msa0619590 | 0.812453 | 4.207624e-51 | -8.615850e-47 |
| Msa0235180 | Msa0619590 | -0.819701 | 1.011402e-52 | -8.615850e-47 |
| Msa0367370 | Msa0619590 | -0.828313 | 9.634467e-55 | -8.615850e-47 |
| Msa0384970 | Msa0619590 | 0.806481 | 8.057167e-50 | -8.615850e-47 |
| Msa0388260 | Msa0619590 | 0.813483 | 2.501620e-51 | -8.615850e-47 |
| Msa0428510 | Msa0619590 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa0456940 | Msa0619590 | -0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0459910 | Msa0619590 | 0.809000 | 2.349275e-50 | -8.615850e-47 |
| Msa0473490 | Msa0619590 | -0.829091 | 6.249857e-55 | -8.615850e-47 |
| Msa0258380 | Msa0619590 | -0.822982 | 1.769770e-53 | -8.615850e-47 |
| Msa0258410 | Msa0619590 | -0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0526640 | Msa0619590 | 0.807207 | 5.656838e-50 | -8.615850e-47 |
| Msa0556600 | Msa0619590 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619590 | MtrunA17_Chr8g0385121 | 98.664 | 599 | 8 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1227 |
| Msa0619590 | MtrunA17_Chr2g0277061 | 67.402 | 589 | 183 | 6 | 11 | 593 | 13 | 598 | 0.0 | 807 |
| Msa0619590 | MtrunA17_Chr4g0046841 | 52.167 | 600 | 266 | 9 | 8 | 591 | 20 | 614 | 0.0 | 594 |
| Msa0619590 | MtrunA17_Chr8g0385131 | 47.157 | 598 | 275 | 9 | 9 | 599 | 12 | 575 | 4.38e-178 | 516 |
| Msa0619590 | MtrunA17_Chr8g0391931 | 46.154 | 598 | 296 | 12 | 10 | 592 | 6 | 592 | 3.72e-170 | 496 |
| Msa0619590 | MtrunA17_Chr8g0377631 | 44.137 | 614 | 295 | 12 | 14 | 588 | 12 | 616 | 1.57e-169 | 496 |
| Msa0619590 | MtrunA17_Chr3g0122211 | 44.152 | 607 | 300 | 12 | 14 | 588 | 18 | 617 | 3.78e-167 | 489 |
| Msa0619590 | MtrunA17_Chr8g0385181 | 45.470 | 585 | 271 | 10 | 9 | 589 | 12 | 552 | 1.90e-166 | 486 |
| Msa0619590 | MtrunA17_Chr2g0284691 | 40.339 | 590 | 289 | 10 | 14 | 588 | 23 | 564 | 9.08e-136 | 407 |
| Msa0619590 | MtrunA17_Chr4g0013011 | 37.625 | 598 | 330 | 10 | 9 | 588 | 10 | 582 | 2.87e-129 | 391 |
| Msa0619590 | MtrunA17_Chr8g0385161 | 48.561 | 278 | 112 | 6 | 320 | 595 | 1 | 249 | 2.20e-74 | 238 |
| Msa0619590 | MtrunA17_Chr8g0385171 | 41.479 | 311 | 148 | 9 | 9 | 316 | 12 | 291 | 5.13e-70 | 228 |
| Msa0619590 | MtrunA17_Chr7g0274871 | 48.966 | 145 | 66 | 3 | 8 | 150 | 125 | 263 | 2.42e-32 | 125 |
| Msa0619590 | MtrunA17_Chr8g0385141 | 45.763 | 118 | 62 | 2 | 114 | 229 | 11 | 128 | 7.82e-26 | 104 |
| Msa0619590 | MtrunA17_Chr7g0274901 | 47.059 | 85 | 44 | 1 | 362 | 445 | 1 | 85 | 1.86e-16 | 74.7 |
| Msa0619590 | MtrunA17_Chr8g0385151 | 56.250 | 48 | 21 | 0 | 270 | 317 | 1 | 48 | 9.05e-15 | 68.6 |
| Msa0619590 | MtrunA17_Chr7g0274911 | 44.048 | 84 | 37 | 3 | 491 | 569 | 2 | 80 | 4.48e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619590 | AT4G24290.2 | 64.992 | 597 | 197 | 8 | 9 | 598 | 10 | 601 | 0.0 | 780 |
| Msa0619590 | AT4G24290.3 | 64.992 | 597 | 197 | 8 | 9 | 598 | 10 | 601 | 0.0 | 780 |
| Msa0619590 | AT1G28380.1 | 50.580 | 603 | 274 | 10 | 9 | 594 | 14 | 609 | 0.0 | 560 |
| Msa0619590 | AT1G14780.1 | 42.834 | 614 | 312 | 13 | 10 | 588 | 9 | 618 | 2.71e-160 | 473 |
| Msa0619590 | AT1G29690.1 | 40.230 | 609 | 280 | 10 | 2 | 588 | 13 | 559 | 3.18e-143 | 427 |
| Msa0619590 | AT4G24290.1 | 58.788 | 330 | 124 | 7 | 9 | 329 | 10 | 336 | 4.09e-126 | 375 |
Find 179 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTACTTGGTGGAATAAA+TGG | 0.173122 | 4_2:-70718126 | Msa0619590:CDS |
| ACATTTGCTCTATTCATTAT+AGG | 0.190531 | 4_2:-70715841 | Msa0619590:three_prime_UTR |
| TTCAGGTTCATTGAGAAATA+TGG | 0.209882 | 4_2:-70719558 | Msa0619590:intron |
| AACAGGCCTTCGATTGTATT+TGG | 0.219951 | 4_2:-70716604 | Msa0619590:CDS |
| ACATCGTAAATAGAGATTTA+TGG | 0.220471 | 4_2:+70718083 | None:intergenic |
| AGGCAATGGGCCCCTGTATT+TGG | 0.223085 | 4_2:-70717316 | Msa0619590:CDS |
| TTTATCACAATTGATAGATT+TGG | 0.225168 | 4_2:+70721127 | None:intergenic |
| TCCTCCAGTTGGAATGTCTT+AGG | 0.239284 | 4_2:+70716528 | None:intergenic |
| TACCTACACAACATATCTTT+TGG | 0.246478 | 4_2:-70715785 | Msa0619590:three_prime_UTR |
| GGACAGCACTTTCTTCTTAC+TGG | 0.246781 | 4_2:+70721304 | None:intergenic |
| CTTCGTACTGTTGAGCTTCC+TGG | 0.257797 | 4_2:-70721173 | Msa0619590:CDS |
| CACAAGATTTGCCTGGTTAC+TGG | 0.270535 | 4_2:-70716071 | Msa0619590:CDS |
| ATCTTTACAGTTCAGTTTCA+TGG | 0.289052 | 4_2:-70717248 | Msa0619590:CDS |
| CCTGGTTACTGGGTTGTGTC+GGG | 0.291638 | 4_2:-70716060 | Msa0619590:CDS |
| GCTGTAGTTGGGGTGAAAAT+AGG | 0.301197 | 4_2:-70719528 | Msa0619590:CDS |
| CTGTAGTTGGGGTGAAAATA+GGG | 0.304438 | 4_2:-70719527 | Msa0619590:CDS |
| TCAACAAACTTCAGAAGTTT+AGG | 0.306525 | 4_2:+70716117 | None:intergenic |
| GTGATTAAATCCGTTGGATT+AGG | 0.310161 | 4_2:-70721272 | Msa0619590:CDS |
| CACTTTGAAGTGGGAGAAAC+TGG | 0.314393 | 4_2:-70716372 | Msa0619590:CDS |
| AAATCTATCAATTGTGATAA+AGG | 0.315125 | 4_2:-70721125 | Msa0619590:CDS |
| TTATCACAATTGATAGATTT+GGG | 0.323441 | 4_2:+70721128 | None:intergenic |
| CTGCTTTGCATATATTATAT+CGG | 0.324889 | 4_2:+70719500 | None:intergenic |
| GGGAGGAGAGGTGCTGTAAA+TGG | 0.325653 | 4_2:+70716553 | None:intergenic |
| TACAATCGAAGGCCTGTTAC+AGG | 0.329460 | 4_2:+70716609 | None:intergenic |
| ACATGGCAGATGAATTATTC+AGG | 0.332823 | 4_2:-70719428 | Msa0619590:CDS |
| TGATGCAGTTCTTCAATTGC+TGG | 0.340098 | 4_2:+70717361 | None:intergenic |
| AGAAAGTTATTGAAAATATA+AGG | 0.345581 | 4_2:-70715953 | Msa0619590:exon |
| AGGAAAGAAAAGTAATTGTT+TGG | 0.366018 | 4_2:-70716580 | Msa0619590:CDS |
| TGCAAGAGGAAAGGTGGAAA+TGG | 0.378051 | 4_2:-70718234 | Msa0619590:CDS |
| TTGATAGATTTGGGAACATT+GGG | 0.386019 | 4_2:+70721137 | None:intergenic |
| CCTGGCTTGACTCAGAAATC+TGG | 0.389891 | 4_2:-70716264 | Msa0619590:CDS |
| CCACCAAGTAGAGATGTAAT+TGG | 0.395115 | 4_2:+70718135 | None:intergenic |
| AGAAAGCGTCCAAGGATGTT+TGG | 0.398488 | 4_2:+70721465 | None:intergenic |
| GCCTGGTTACTGGGTTGTGT+CGG | 0.401562 | 4_2:-70716061 | Msa0619590:CDS |
| CCAGGAGAACCATCCCATTC+CGG | 0.402482 | 4_2:+70716282 | None:intergenic |
| CCTCCAGTTGGAATGTCTTA+GGG | 0.404580 | 4_2:+70716529 | None:intergenic |
| CTCTGCGACTTCTTCCTATC+AGG | 0.407497 | 4_2:+70717277 | None:intergenic |
| GTAGGAATGAAGCCTGTAAC+AGG | 0.410479 | 4_2:-70716621 | Msa0619590:CDS |
| GGCATTTAATTCAAAAGAAA+AGG | 0.411840 | 4_2:-70719373 | Msa0619590:intron |
| AGGGCCTCCTGTGCCTGCTC+AGG | 0.416486 | 4_2:-70716142 | Msa0619590:CDS |
| CCGGAATGGGATGGTTCTCC+TGG | 0.421354 | 4_2:-70716282 | Msa0619590:CDS |
| GGACAATGGACTAGGATTCC+TGG | 0.425003 | 4_2:-70718660 | Msa0619590:CDS |
| CCCATTCCGGCGCTCTCACA+CGG | 0.430776 | 4_2:+70716295 | None:intergenic |
| CGCTCTCACACGGGATGCAT+TGG | 0.434279 | 4_2:+70716305 | None:intergenic |
| AACCAGGAGGTGTCACTGTC+TGG | 0.436200 | 4_2:-70720260 | Msa0619590:CDS |
| TTTCATGCAAACAATGAGAA+AGG | 0.437538 | 4_2:-70715656 | Msa0619590:three_prime_UTR |
| ACAAGATTTGCCTGGTTACT+GGG | 0.437969 | 4_2:-70716070 | Msa0619590:CDS |
| GCAGGCACAGGAGGCCCTCC+AGG | 0.439934 | 4_2:+70716147 | None:intergenic |
| ATTGATAGATTTGGGAACAT+TGG | 0.442714 | 4_2:+70721136 | None:intergenic |
| GTATTTGGTGAGCTTGCCCT+TGG | 0.446594 | 4_2:-70717301 | Msa0619590:CDS |
| TAACTTTCTGTCTCTTCATC+CGG | 0.447066 | 4_2:+70715967 | None:intergenic |
| GTGGTCAATAGCGATCAATT+TGG | 0.452792 | 4_2:+70721202 | None:intergenic |
| TCTTTACAGTTCAGTTTCAT+GGG | 0.453459 | 4_2:-70717247 | Msa0619590:CDS |
| GCAAGAGGAAAGGTGGAAAT+GGG | 0.457669 | 4_2:-70718233 | Msa0619590:CDS |
| ACGTCCGATGGCTGTGGTGG+CGG | 0.457757 | 4_2:+70716192 | None:intergenic |
| AATGACATTGATATTACATC+AGG | 0.457909 | 4_2:+70718162 | None:intergenic |
| GAATTATTCAGGGGCCAGGC+TGG | 0.461828 | 4_2:-70719417 | Msa0619590:CDS |
| AGGGCAAGCTCACCAAATAC+AGG | 0.462328 | 4_2:+70717304 | None:intergenic |
| CTCTACTTGGTGGAATAAAT+GGG | 0.463188 | 4_2:-70718125 | Msa0619590:CDS |
| ATCATGGGATCCCGCTGCAC+TGG | 0.464186 | 4_2:-70720063 | Msa0619590:CDS |
| GGACAAAATAACGCTAATGA+TGG | 0.464451 | 4_2:-70719396 | Msa0619590:CDS |
| ACTGAAACGCAGAATTGAAA+TGG | 0.467660 | 4_2:+70720222 | None:intergenic |
| CTGGTTACTGGGTTGTGTCG+GGG | 0.469376 | 4_2:-70716059 | Msa0619590:CDS |
| TTCGGATCAAGTAGTTCAAC+GGG | 0.469930 | 4_2:-70715908 | Msa0619590:three_prime_UTR |
| AACAAGCTGTTCCTTCATCA+TGG | 0.471704 | 4_2:-70720079 | Msa0619590:CDS |
| AAGTACCTTGCCAGTGCAGC+GGG | 0.471772 | 4_2:+70720053 | None:intergenic |
| GACAAAATAACGCTAATGAT+GGG | 0.475381 | 4_2:-70719395 | Msa0619590:CDS |
| CCCGTGTGAGAGCGCCGGAA+TGG | 0.475856 | 4_2:-70716296 | Msa0619590:CDS |
| TATGGAACCCATGCTGTAGT+TGG | 0.476255 | 4_2:-70719540 | Msa0619590:CDS |
| TTGTCATCGTAGGATTCAAC+AGG | 0.477803 | 4_2:+70716414 | None:intergenic |
| CCGTGTGAGAGCGCCGGAAT+GGG | 0.478499 | 4_2:-70716295 | Msa0619590:CDS |
| CTGTCTGGTAAGATTCCAAC+AGG | 0.484770 | 4_2:-70720245 | Msa0619590:CDS |
| ATGGAACCCATGCTGTAGTT+GGG | 0.484856 | 4_2:-70719539 | Msa0619590:CDS |
| GATGTGTTTACATAGAGCTT+AGG | 0.487249 | 4_2:+70717223 | None:intergenic |
| TTCATGCAAACAATGAGAAA+GGG | 0.487922 | 4_2:-70715655 | Msa0619590:three_prime_UTR |
| GTTTCAGCTTCCAAGGCAAT+GGG | 0.490214 | 4_2:-70717329 | Msa0619590:CDS |
| AAATATTTACCTCTGTTTCA+CGG | 0.491033 | 4_2:+70718618 | None:intergenic |
| ATTGACAAACCAAACATCCT+TGG | 0.492847 | 4_2:-70721474 | Msa0619590:five_prime_UTR |
| AGTTTCAGCTTCCAAGGCAA+TGG | 0.494982 | 4_2:-70717330 | Msa0619590:CDS |
| CCTCCCTAAGACATTCCAAC+TGG | 0.496619 | 4_2:-70716532 | Msa0619590:CDS |
| AGAATGAAGATGAATATCTT+CGG | 0.498634 | 4_2:-70715926 | Msa0619590:three_prime_UTR |
| CCCGACACAACCCAGTAACC+AGG | 0.503851 | 4_2:+70716060 | None:intergenic |
| GATGACAACGCTGTTGTGAC+TGG | 0.505109 | 4_2:-70716399 | Msa0619590:CDS |
| AATACAGGGGCCCATTGCCT+TGG | 0.505547 | 4_2:+70717319 | None:intergenic |
| AACTTCTTGTAGGTTGATGT+AGG | 0.509010 | 4_2:-70716639 | Msa0619590:intron |
| AGAACGTAAATATTATGAAA+AGG | 0.509241 | 4_2:-70716472 | Msa0619590:CDS |
| GGCCTTCGATTGTATTTGGA+AGG | 0.513342 | 4_2:-70716600 | Msa0619590:CDS |
| TGGTTACTGGGTTGTGTCGG+GGG | 0.513759 | 4_2:-70716058 | Msa0619590:CDS |
| GATTAGTCTTGTCCTCCAGT+TGG | 0.515939 | 4_2:+70716517 | None:intergenic |
| TACCAGACAGTGACACCTCC+TGG | 0.517330 | 4_2:+70720258 | None:intergenic |
| GGTGCCTGAGCAGGCACAGG+AGG | 0.519880 | 4_2:+70716138 | None:intergenic |
| ATAATATTTACGTTCTGAAG+AGG | 0.520688 | 4_2:+70716479 | None:intergenic |
| TGTAGTTGGGGTGAAAATAG+GGG | 0.521680 | 4_2:-70719526 | Msa0619590:CDS |
| ACATTTACGTCCGATGGCTG+TGG | 0.522565 | 4_2:+70716186 | None:intergenic |
| AGATGAATTATTCAGGGGCC+AGG | 0.523004 | 4_2:-70719421 | Msa0619590:CDS |
| AGAAGAGAAGAAAGCGTCCA+AGG | 0.523103 | 4_2:+70721457 | None:intergenic |
| TTCCTTCCAAATACAATCGA+AGG | 0.523301 | 4_2:+70716598 | None:intergenic |
| TTTATGAGGGACAATGGACT+AGG | 0.526501 | 4_2:-70718668 | Msa0619590:CDS |
| GACTGGTGCTCACTTTGAAG+TGG | 0.527063 | 4_2:-70716382 | Msa0619590:CDS |
| ATACCAATTACATCTCTACT+TGG | 0.528757 | 4_2:-70718138 | Msa0619590:CDS |
| CCAGATTTCTGAGTCAAGCC+AGG | 0.528793 | 4_2:+70716264 | None:intergenic |
| AGAAGTTTAGGTGCCTGAGC+AGG | 0.531964 | 4_2:+70716129 | None:intergenic |
| CCAATTACATCTCTACTTGG+TGG | 0.533413 | 4_2:-70718135 | Msa0619590:CDS |
| TTTATGTGCAAGAGGAAAGG+TGG | 0.534940 | 4_2:-70718240 | Msa0619590:CDS |
| TTAGGTGCCTGAGCAGGCAC+AGG | 0.536783 | 4_2:+70716135 | None:intergenic |
| ACCAAGAGTCTTGCTTTCGA+TGG | 0.538520 | 4_2:-70720167 | Msa0619590:CDS |
| AGAGGACCACAAGATTTGCC+TGG | 0.539438 | 4_2:-70716078 | Msa0619590:CDS |
| TGCTATGTTGTAGAGTGTAA+TGG | 0.539930 | 4_2:+70720139 | None:intergenic |
| GATGTCAGAGCAGTTCAACC+AGG | 0.542518 | 4_2:-70720276 | Msa0619590:CDS |
| AGCTTGCCCTTGGTCCTGAT+AGG | 0.545252 | 4_2:-70717291 | Msa0619590:CDS |
| ATTTACCTCTGTTTCACGGT+AGG | 0.545369 | 4_2:+70718622 | None:intergenic |
| CTTGGTGGAATAAATGGGAG+TGG | 0.546225 | 4_2:-70718120 | Msa0619590:CDS |
| AGGATTGAGCTTGAATGTCC+AGG | 0.547656 | 4_2:+70718642 | None:intergenic |
| GAGTTCACATTTACGTCCGA+TGG | 0.548325 | 4_2:+70716180 | None:intergenic |
| CATCAGAACACAATCGCATA+CGG | 0.548445 | 4_2:+70721099 | None:intergenic |
| GGATTTAATCACATCTTCAA+CGG | 0.552918 | 4_2:+70721283 | None:intergenic |
| GAAGATGTGATTAAATCCGT+TGG | 0.554663 | 4_2:-70721278 | Msa0619590:CDS |
| TTTCACCCCAACTACAGCAT+GGG | 0.554948 | 4_2:+70719533 | None:intergenic |
| GGGAGAAACTGGTCTGAAGA+AGG | 0.557980 | 4_2:-70716361 | Msa0619590:CDS |
| AACTCTGCTTTATACCCTGG+AGG | 0.559576 | 4_2:-70716162 | Msa0619590:CDS |
| GTGAGAGCGCCGGAATGGGA+TGG | 0.561426 | 4_2:-70716291 | Msa0619590:CDS |
| TTCATCAACTAAATAAGAAG+TGG | 0.561835 | 4_2:+70721369 | None:intergenic |
| GCAGAATTGAAATGGCCTGT+TGG | 0.563332 | 4_2:+70720230 | None:intergenic |
| TGCATCCCGTGTGAGAGCGC+CGG | 0.564781 | 4_2:-70716301 | Msa0619590:CDS |
| CATGGCAGATGAATTATTCA+GGG | 0.565396 | 4_2:-70719427 | Msa0619590:CDS |
| GGGATCCCGCTGCACTGGCA+AGG | 0.568140 | 4_2:-70720058 | Msa0619590:intron |
| GCCATCGAAAGCAAGACTCT+TGG | 0.568546 | 4_2:+70720166 | None:intergenic |
| GCTGCCGCCACCACAGCCAT+CGG | 0.569256 | 4_2:-70716196 | Msa0619590:CDS |
| CCCCAGTTTATGAGGGACAA+TGG | 0.569449 | 4_2:-70718674 | Msa0619590:intron |
| CTCTTCATCCGGTAAAATCA+CGG | 0.571304 | 4_2:+70715978 | None:intergenic |
| ACAAGCTGTTCCTTCATCAT+GGG | 0.571304 | 4_2:-70720078 | Msa0619590:CDS |
| GCAGCGGGATCCCATGATGA+AGG | 0.574310 | 4_2:+70720068 | None:intergenic |
| CTTCGGATCAAGTAGTTCAA+CGG | 0.578561 | 4_2:-70715909 | Msa0619590:three_prime_UTR |
| TATGAGAGAAGCTCTTCCAC+TGG | 0.578760 | 4_2:+70716448 | None:intergenic |
| CAGTTTGACACCACTCATTG+TGG | 0.581670 | 4_2:+70718196 | None:intergenic |
| GTGAACTCTGCTTTATACCC+TGG | 0.583406 | 4_2:-70716165 | Msa0619590:CDS |
| GGCAAGGCTTTATGTCGAGA+AGG | 0.584563 | 4_2:-70716037 | Msa0619590:CDS |
| ATGTCTTAGGGAGGGAGGAG+AGG | 0.584692 | 4_2:+70716541 | None:intergenic |
| GAGCTTCTCTCATATTTGCA+CGG | 0.587829 | 4_2:-70716439 | Msa0619590:CDS |
| AAGTTTATGTGCAAGAGGAA+AGG | 0.589600 | 4_2:-70718243 | Msa0619590:CDS |
| TGATCAATCATGATTCCCCT+TGG | 0.589687 | 4_2:-70715727 | Msa0619590:three_prime_UTR |
| GGGCAAGCTCACCAAATACA+GGG | 0.595006 | 4_2:+70717305 | None:intergenic |
| ATATAAAGTTTATGTGCAAG+AGG | 0.596880 | 4_2:-70718248 | Msa0619590:CDS |
| AAAATCTCAGCCACAATGAG+TGG | 0.599869 | 4_2:-70718206 | Msa0619590:CDS |
| CAGGCACAGGAGGCCCTCCA+GGG | 0.600964 | 4_2:+70716148 | None:intergenic |
| CATACAGACACAAAGACCAA+GGG | 0.605511 | 4_2:+70715711 | None:intergenic |
| AAAGTACCTTGCCAGTGCAG+CGG | 0.617410 | 4_2:+70720052 | None:intergenic |
| TTGGGAATTGAAACACGACC+AGG | 0.619304 | 4_2:+70721155 | None:intergenic |
| AAGTTATTGAAAATATAAGG+TGG | 0.622518 | 4_2:-70715950 | Msa0619590:exon |
| ACTGGTGCTCACTTTGAAGT+GGG | 0.625192 | 4_2:-70716381 | Msa0619590:CDS |
| TTTACGTCCGATGGCTGTGG+TGG | 0.625886 | 4_2:+70716189 | None:intergenic |
| CCATTCCGGCGCTCTCACAC+GGG | 0.626310 | 4_2:+70716296 | None:intergenic |
| CCAGTTGGAATGTCTTAGGG+AGG | 0.626671 | 4_2:+70716532 | None:intergenic |
| ACTCTGCTTTATACCCTGGA+GGG | 0.628094 | 4_2:-70716161 | Msa0619590:CDS |
| GCTCTATGTAAACACATCAC+CGG | 0.630530 | 4_2:-70717218 | Msa0619590:intron |
| CAGTTGGAATGTCTTAGGGA+GGG | 0.632313 | 4_2:+70716533 | None:intergenic |
| GTAGTTGGGGTGAAAATAGG+GGG | 0.632775 | 4_2:-70719525 | Msa0619590:CDS |
| ACATACAGACACAAAGACCA+AGG | 0.633038 | 4_2:+70715710 | None:intergenic |
| GAATTTGAGTCTGAGATCGT+TGG | 0.633313 | 4_2:+70721238 | None:intergenic |
| CCCTAAGACATTCCAACTGG+AGG | 0.633646 | 4_2:-70716529 | Msa0619590:CDS |
| ACTTCTTCCTATCAGGACCA+AGG | 0.634932 | 4_2:+70717284 | None:intergenic |
| AATATTATGAAAAGGTCCAG+TGG | 0.637646 | 4_2:-70716464 | Msa0619590:CDS |
| CAGTAACCAGGCAAATCTTG+TGG | 0.638344 | 4_2:+70716072 | None:intergenic |
| TTGGAATGTCTTAGGGAGGG+AGG | 0.641738 | 4_2:+70716536 | None:intergenic |
| TGTACATCAGAAGGTTGGAG+AGG | 0.642552 | 4_2:+70719465 | None:intergenic |
| CACAACAGCGTTGTCATCGT+AGG | 0.646159 | 4_2:+70716404 | None:intergenic |
| ACAAAATAACGCTAATGATG+GGG | 0.646611 | 4_2:-70719394 | Msa0619590:CDS |
| CTTCTTCCTATCAGGACCAA+GGG | 0.648164 | 4_2:+70717285 | None:intergenic |
| TCCCAAAAGATATGTTGTGT+AGG | 0.654087 | 4_2:+70715783 | None:intergenic |
| GCAAGGCTTTATGTCGAGAA+GGG | 0.657734 | 4_2:-70716036 | Msa0619590:CDS |
| TGGAACCCATGCTGTAGTTG+GGG | 0.658404 | 4_2:-70719538 | Msa0619590:CDS |
| TCAATCCTACCGTGAAACAG+AGG | 0.667846 | 4_2:-70718627 | Msa0619590:intron |
| GTCAGAGCAGTTCAACCAGG+AGG | 0.677917 | 4_2:-70720273 | Msa0619590:CDS |
| GAGATCGTAACCTAATCCAA+CGG | 0.688460 | 4_2:+70721262 | None:intergenic |
| ATACAGACACAAAGACCAAG+GGG | 0.690585 | 4_2:+70715712 | None:intergenic |
| GACACAACAGAAATGACTAG+AGG | 0.699740 | 4_2:-70716096 | Msa0619590:CDS |
| GGCAAGCTCACCAAATACAG+GGG | 0.700077 | 4_2:+70717306 | None:intergenic |
| ATGGCAGATGAATTATTCAG+GGG | 0.704433 | 4_2:-70719426 | Msa0619590:CDS |
| CAACAGTACGAAGATTGTCG+TGG | 0.706113 | 4_2:+70721183 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAGTTTCTTCTTTTTT+TGG | - | chr4_2:70716119-70716138 | Msa0619590:CDS | 15.0% |
| !!! | ATATAAGATTTTTAATTGCA+TGG | - | chr4_2:70716643-70716662 | Msa0619590:intron | 15.0% |
| !! | TTTCTTTCAAAAGAATATTT+AGG | - | chr4_2:70717266-70717285 | Msa0619590:CDS | 15.0% |
| !!! | TTTTATAATTTATATTGCTG+TGG | - | chr4_2:70718667-70718686 | Msa0619590:CDS | 15.0% |
| !!! | TAAAATTATTTTCCTTACTA+GGG | - | chr4_2:70718823-70718842 | Msa0619590:intron | 15.0% |
| !! | TTAAATAAGTAAATGACTAA+AGG | + | chr4_2:70719114-70719133 | None:intergenic | 15.0% |
| !!! | AAAAATTTAACTTGAGATTT+TGG | + | chr4_2:70720304-70720323 | None:intergenic | 15.0% |
| !! | AGAAAGTTATTGAAAATATA+AGG | - | chr4_2:70721200-70721219 | Msa0619590:CDS | 15.0% |
| !! | TTATCACAATTGATAGATTT+GGG | + | chr4_2:70716028-70716047 | None:intergenic | 20.0% |
| !! | TTTATCACAATTGATAGATT+TGG | + | chr4_2:70716029-70716048 | None:intergenic | 20.0% |
| !! | AAATCTATCAATTGTGATAA+AGG | - | chr4_2:70716028-70716047 | Msa0619590:CDS | 20.0% |
| !! | TGAAATTCATAAATGATTTC+TGG | - | chr4_2:70716300-70716319 | Msa0619590:CDS | 20.0% |
| !! | TTAGATTATTTAGACCATTT+GGG | + | chr4_2:70716389-70716408 | None:intergenic | 20.0% |
| !! | ATTAGATTATTTAGACCATT+TGG | + | chr4_2:70716390-70716409 | None:intergenic | 20.0% |
| !!! | ATCTTATATAAACCTTTTTC+TGG | + | chr4_2:70716632-70716651 | None:intergenic | 20.0% |
| !!! | TTTAATTGCATGGTTATTTT+AGG | - | chr4_2:70716653-70716672 | Msa0619590:intron | 20.0% |
| !!! | ATTTTAGTTCCTTAAAATGT+GGG | + | chr4_2:70716716-70716735 | None:intergenic | 20.0% |
| !!! | TATTTTAGTTCCTTAAAATG+TGG | + | chr4_2:70716717-70716736 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTGTTCTTATTC+CGG | - | chr4_2:70716740-70716759 | Msa0619590:intron | 20.0% |
| !! | AGAATAAAAGAAAAAAGAAC+CGG | + | chr4_2:70717818-70717837 | None:intergenic | 20.0% |
| !!! | CTTTTATTCTCTTTGATTTA+AGG | - | chr4_2:70717828-70717847 | Msa0619590:intron | 20.0% |
| !!! | AGTTTGTATTTGTTGATTTT+AGG | - | chr4_2:70718024-70718043 | Msa0619590:intron | 20.0% |
| !!! | GTTTGTATTTGTTGATTTTA+GGG | - | chr4_2:70718025-70718044 | Msa0619590:intron | 20.0% |
| !! | TGTAGATATCAAGATTTATT+TGG | - | chr4_2:70718106-70718125 | Msa0619590:CDS | 20.0% |
| !! | GTAGATATCAAGATTTATTT+GGG | - | chr4_2:70718107-70718126 | Msa0619590:CDS | 20.0% |
| !! | TAGATATCAAGATTTATTTG+GGG | - | chr4_2:70718108-70718127 | Msa0619590:CDS | 20.0% |
| !! | TATATCATGTTATATGTTAG+AGG | - | chr4_2:70718152-70718171 | Msa0619590:CDS | 20.0% |
| !! | AAATAATATATCTCCCATTA+AGG | + | chr4_2:70718352-70718371 | None:intergenic | 20.0% |
| !!! | GGTAATGTAATTTTTTGTTT+AGG | + | chr4_2:70718416-70718435 | None:intergenic | 20.0% |
| !! | AAACCTGATAAAAAGAAAAT+AGG | + | chr4_2:70718627-70718646 | None:intergenic | 20.0% |
| !!! | CTAAAATTATTTTCCTTACT+AGG | - | chr4_2:70718822-70718841 | Msa0619590:intron | 20.0% |
| !! | TCAAAAAATTTATACATCTG+CGG | + | chr4_2:70719170-70719189 | None:intergenic | 20.0% |
| !! | CTTAAAAATGATAGAATAAC+AGG | + | chr4_2:70719416-70719435 | None:intergenic | 20.0% |
| !! | AACTAATTCAAAAGCTTAAA+CGG | - | chr4_2:70720031-70720050 | Msa0619590:intron | 20.0% |
| !!! | ATTTTTCCAATAAAATTGTC+AGG | - | chr4_2:70720318-70720337 | Msa0619590:intron | 20.0% |
| !! | AGAACGTAAATATTATGAAA+AGG | - | chr4_2:70720681-70720700 | Msa0619590:intron | 20.0% |
| !! | AAGTTATTGAAAATATAAGG+TGG | - | chr4_2:70721203-70721222 | Msa0619590:CDS | 20.0% |
| ! | TAATGAAAGCAAAAACCAAA+GGG | + | chr4_2:70715752-70715771 | None:intergenic | 25.0% |
| ! | TTAATGAAAGCAAAAACCAA+AGG | + | chr4_2:70715753-70715772 | None:intergenic | 25.0% |
| ! | TTCATCAACTAAATAAGAAG+TGG | + | chr4_2:70715787-70715806 | None:intergenic | 25.0% |
| ! | AATGTTAAGAAAGAAAAGCA+AGG | + | chr4_2:70716099-70716118 | None:intergenic | 25.0% |
| !! | TTTAGCTCAAGTTTATTATG+TGG | - | chr4_2:70716143-70716162 | Msa0619590:CDS | 25.0% |
| ! | TTAGCTCAAGTTTATTATGT+GGG | - | chr4_2:70716144-70716163 | Msa0619590:CDS | 25.0% |
| !!! | CTCTTATTTTGGAAACAAAT+TGG | + | chr4_2:70716258-70716277 | None:intergenic | 25.0% |
| !! | CAATTTGTTTCCAAAATAAG+AGG | - | chr4_2:70716256-70716275 | Msa0619590:CDS | 25.0% |
| !!! | TATAAGATTTTAAAACCCCT+AGG | - | chr4_2:70716414-70716433 | Msa0619590:CDS | 25.0% |
| !!! | ATAAGATTTTAAAACCCCTA+GGG | - | chr4_2:70716415-70716434 | Msa0619590:CDS | 25.0% |
| ! | ACATAAGTTCATAACACATA+AGG | + | chr4_2:70717228-70717247 | None:intergenic | 25.0% |
| ! | CTTATGTGATTAATAAGAGA+TGG | - | chr4_2:70717241-70717260 | Msa0619590:CDS | 25.0% |
| !! | TTTAGGACATGCAAAAATAA+AGG | - | chr4_2:70717283-70717302 | Msa0619590:CDS | 25.0% |
| !! | TCTTTTCATTGTATCATTTC+AGG | - | chr4_2:70717578-70717597 | Msa0619590:intron | 25.0% |
| ! | CTGCTTTGCATATATTATAT+CGG | + | chr4_2:70717656-70717675 | None:intergenic | 25.0% |
| !!! | AATTTTTTCTGTACATCAGA+AGG | + | chr4_2:70717700-70717719 | None:intergenic | 25.0% |
| ! | TGATGTACAGAAAAAATTGA+AGG | - | chr4_2:70717702-70717721 | Msa0619590:intron | 25.0% |
| ! | GGCATTTAATTCAAAAGAAA+AGG | - | chr4_2:70717780-70717799 | Msa0619590:intron | 25.0% |
| ! | GAATAAAAGAAAAAAGAACC+GGG | + | chr4_2:70717817-70717836 | None:intergenic | 25.0% |
| ! | ACATGATATAGAATGCTAAA+GGG | + | chr4_2:70718142-70718161 | None:intergenic | 25.0% |
| ! | AACATGATATAGAATGCTAA+AGG | + | chr4_2:70718143-70718162 | None:intergenic | 25.0% |
| ! | AAATGTTAGAATGAATCCAA+AGG | - | chr4_2:70718325-70718344 | Msa0619590:intron | 25.0% |
| ! | AATGGGAGATATATTATTTC+TGG | - | chr4_2:70718353-70718372 | Msa0619590:intron | 25.0% |
| ! | AAATATTTACCTCTGTTTCA+CGG | + | chr4_2:70718538-70718557 | None:intergenic | 25.0% |
| !! | TTGCCTATTTTCTTTTTATC+AGG | - | chr4_2:70718621-70718640 | Msa0619590:intron | 25.0% |
| ! | TTTGTATTTGAAAAGTTCCT+GGG | - | chr4_2:70718741-70718760 | Msa0619590:intron | 25.0% |
| ! | ATATAAAGTTTATGTGCAAG+AGG | - | chr4_2:70718905-70718924 | Msa0619590:intron | 25.0% |
| ! | AATGACATTGATATTACATC+AGG | + | chr4_2:70718994-70719013 | None:intergenic | 25.0% |
| ! | ACATCGTAAATAGAGATTTA+TGG | + | chr4_2:70719073-70719092 | None:intergenic | 25.0% |
| !!! | ATAATTTTTCAGTGGAATGT+TGG | + | chr4_2:70719318-70719337 | None:intergenic | 25.0% |
| ! | ATTCCACTGAAAAATTATGT+CGG | - | chr4_2:70719320-70719339 | Msa0619590:intron | 25.0% |
| ! | ATTAGTAGTAGTAATTGTGT+GGG | + | chr4_2:70719360-70719379 | None:intergenic | 25.0% |
| ! | TATTAGTAGTAGTAATTGTG+TGG | + | chr4_2:70719361-70719380 | None:intergenic | 25.0% |
| ! | AATCTTCCATAAACGAATAA+TGG | + | chr4_2:70719555-70719574 | None:intergenic | 25.0% |
| ! | AAAGATAAAAACAAGGCAAT+TGG | + | chr4_2:70719995-70720014 | None:intergenic | 25.0% |
| !!! | AATTGCCTTGTTTTTATCTT+TGG | - | chr4_2:70719994-70720013 | Msa0619590:intron | 25.0% |
| !! | GTTTAAGCTTTTGAATTAGT+TGG | + | chr4_2:70720032-70720051 | None:intergenic | 25.0% |
| ! | TGATTAATGAGAAAATCACA+GGG | + | chr4_2:70720120-70720139 | None:intergenic | 25.0% |
| ! | ATGATTAATGAGAAAATCAC+AGG | + | chr4_2:70720121-70720140 | None:intergenic | 25.0% |
| ! | TACAAATGTGGAGAATTATA+TGG | - | chr4_2:70720481-70720500 | Msa0619590:intron | 25.0% |
| ! | AGGAAAGAAAAGTAATTGTT+TGG | - | chr4_2:70720573-70720592 | Msa0619590:intron | 25.0% |
| !!! | ATAATATTTACGTTCTGAAG+AGG | + | chr4_2:70720677-70720696 | None:intergenic | 25.0% |
| ! | AGAATGAAGATGAATATCTT+CGG | - | chr4_2:70721227-70721246 | Msa0619590:CDS | 25.0% |
| ! | ACATTTGCTCTATTCATTAT+AGG | - | chr4_2:70721312-70721331 | Msa0619590:exon | 25.0% |
| !!! | GAATGCATTTTTTTTGTTAG+TGG | - | chr4_2:70721470-70721489 | Msa0619590:five_prime_UTR | 25.0% |
| !! | TATTCTTTTGCTTTTCCCTT+TGG | - | chr4_2:70715734-70715753 | Msa0619590:three_prime_UTR | 30.0% |
| GGATTTAATCACATCTTCAA+CGG | + | chr4_2:70715873-70715892 | None:intergenic | 30.0% | |
| TTGATAGATTTGGGAACATT+GGG | + | chr4_2:70716019-70716038 | None:intergenic | 30.0% | |
| ATTGATAGATTTGGGAACAT+TGG | + | chr4_2:70716020-70716039 | None:intergenic | 30.0% | |
| !!! | TGTTGTGTTTTTTTCTGTGT+TGG | - | chr4_2:70716187-70716206 | Msa0619590:CDS | 30.0% |
| GTTTCCAAAATAAGAGGTTT+AGG | - | chr4_2:70716262-70716281 | Msa0619590:CDS | 30.0% | |
| !! | ATTGCCTAAACCTCTTATTT+TGG | + | chr4_2:70716269-70716288 | None:intergenic | 30.0% |
| AATAAGAGGTTTAGGCAATT+TGG | - | chr4_2:70716270-70716289 | Msa0619590:CDS | 30.0% | |
| ATTATTTAGACCATTTGGGT+TGG | + | chr4_2:70716385-70716404 | None:intergenic | 30.0% | |
| !! | TTTTCTGGAAACTTGATATC+CGG | + | chr4_2:70716617-70716636 | None:intergenic | 30.0% |
| GATATCAAGTTTCCAGAAAA+AGG | - | chr4_2:70716617-70716636 | Msa0619590:CDS | 30.0% | |
| TCCGGTGAAATTAAATTCTT+TGG | - | chr4_2:70716758-70716777 | Msa0619590:intron | 30.0% | |
| ! | GCCAAAGAATTTAATTTCAC+CGG | + | chr4_2:70716762-70716781 | None:intergenic | 30.0% |
| CTAAAGGATAAAGCAAAACA+AGG | + | chr4_2:70716858-70716877 | None:intergenic | 30.0% | |
| TAGCTAAACATAAAGCAAGA+GGG | + | chr4_2:70717158-70717177 | None:intergenic | 30.0% | |
| ATAGCTAAACATAAAGCAAG+AGG | + | chr4_2:70717159-70717178 | None:intergenic | 30.0% | |
| GCAAACAACGAAAAAATTCA+AGG | + | chr4_2:70717487-70717506 | None:intergenic | 30.0% | |
| CATTTACATGAGAAATGTTG+TGG | + | chr4_2:70717523-70717542 | None:intergenic | 30.0% | |
| ! | TTCAGGTTCATTGAGAAATA+TGG | - | chr4_2:70717595-70717614 | Msa0619590:intron | 30.0% |
| ACAGAAAAAATTGAAGGACA+TGG | - | chr4_2:70717708-70717727 | Msa0619590:intron | 30.0% | |
| GACAAAATAACGCTAATGAT+GGG | - | chr4_2:70717758-70717777 | Msa0619590:intron | 30.0% | |
| ACAAAATAACGCTAATGATG+GGG | - | chr4_2:70717759-70717778 | Msa0619590:intron | 30.0% | |
| !!! | GTTGTTACTTTTCTGAATAC+TGG | - | chr4_2:70717973-70717992 | Msa0619590:intron | 30.0% |
| TAAGATAACAAGATAATCCC+TGG | - | chr4_2:70718059-70718078 | Msa0619590:intron | 30.0% | |
| ! | GATCTTTTTATTGAAGACCA+GGG | + | chr4_2:70718079-70718098 | None:intergenic | 30.0% |
| ! | AGATCTTTTTATTGAAGACC+AGG | + | chr4_2:70718080-70718099 | None:intergenic | 30.0% |
| AATTTATATTGCTGTGGAAC+TGG | - | chr4_2:70718673-70718692 | Msa0619590:intron | 30.0% | |
| CTTTGTATTTGAAAAGTTCC+TGG | - | chr4_2:70718740-70718759 | Msa0619590:intron | 30.0% | |
| !! | ATTAAGCAGAAGAGTGTTTA+TGG | + | chr4_2:70718777-70718796 | None:intergenic | 30.0% |
| TAAAATGTTTAACGAGAAGG+GGG | + | chr4_2:70718877-70718896 | None:intergenic | 30.0% | |
| CTAAAATGTTTAACGAGAAG+GGG | + | chr4_2:70718878-70718897 | None:intergenic | 30.0% | |
| CCTAAAATGTTTAACGAGAA+GGG | + | chr4_2:70718879-70718898 | None:intergenic | 30.0% | |
| ACCTAAAATGTTTAACGAGA+AGG | + | chr4_2:70718880-70718899 | None:intergenic | 30.0% | |
| ATACCAATTACATCTCTACT+TGG | - | chr4_2:70719015-70719034 | Msa0619590:intron | 30.0% | |
| ! | TAGAGAAACTTGTGTTTTCT+TGG | - | chr4_2:70719225-70719244 | Msa0619590:intron | 30.0% |
| ATGAGAAACAAATACTGTTG+TGG | - | chr4_2:70719621-70719640 | Msa0619590:intron | 30.0% | |
| ! | TCTTTTTAAACTCTTGTGCA+AGG | + | chr4_2:70719719-70719738 | None:intergenic | 30.0% |
| ! | TGAAGAACTGCATCAATTTT+TGG | - | chr4_2:70719800-70719819 | Msa0619590:intron | 30.0% |
| ATCTTTACAGTTCAGTTTCA+TGG | - | chr4_2:70719905-70719924 | Msa0619590:intron | 30.0% | |
| TCTTTACAGTTCAGTTTCAT+GGG | - | chr4_2:70719906-70719925 | Msa0619590:intron | 30.0% | |
| ! | ACTGTATTTTATGTTTCCGA+GGG | - | chr4_2:70720219-70720238 | Msa0619590:CDS | 30.0% |
| AAGATGTATATGTGATGCAA+GGG | + | chr4_2:70720255-70720274 | None:intergenic | 30.0% | |
| AAAGATGTATATGTGATGCA+AGG | + | chr4_2:70720256-70720275 | None:intergenic | 30.0% | |
| ! | ACAACTCCTGACAATTTTAT+TGG | + | chr4_2:70720327-70720346 | None:intergenic | 30.0% |
| ! | TTGTATTGATGAAGACACTT+GGG | - | chr4_2:70720392-70720411 | Msa0619590:intron | 30.0% |
| ACGTTGCAAAATTACAAATG+TGG | - | chr4_2:70720469-70720488 | Msa0619590:intron | 30.0% | |
| AATATTATGAAAAGGTCCAG+TGG | - | chr4_2:70720689-70720708 | Msa0619590:intron | 30.0% | |
| TCAACAAACTTCAGAAGTTT+AGG | + | chr4_2:70721039-70721058 | None:intergenic | 30.0% | |
| ! | TCTTTTAACCGTGATTTTAC+CGG | - | chr4_2:70721167-70721186 | Msa0619590:CDS | 30.0% |
| ! | TACCTACACAACATATCTTT+TGG | - | chr4_2:70721368-70721387 | Msa0619590:five_prime_UTR | 30.0% |
| ! | ACCTACACAACATATCTTTT+GGG | - | chr4_2:70721369-70721388 | Msa0619590:five_prime_UTR | 30.0% |
| !! | ATATCTTTTGGGAGAATCAT+TGG | - | chr4_2:70721380-70721399 | Msa0619590:five_prime_UTR | 30.0% |
| TTTCATGCAAACAATGAGAA+AGG | - | chr4_2:70721497-70721516 | Msa0619590:five_prime_UTR | 30.0% | |
| ATTGACAAACCAAACATCCT+TGG | - | chr4_2:70715679-70715698 | Msa0619590:three_prime_UTR | 35.0% | |
| GAAGATGTGATTAAATCCGT+TGG | - | chr4_2:70715875-70715894 | Msa0619590:three_prime_UTR | 35.0% | |
| GTGATTAAATCCGTTGGATT+AGG | - | chr4_2:70715881-70715900 | Msa0619590:three_prime_UTR | 35.0% | |
| ! | TGATGTTCTTTCTTTTCAGC+AGG | - | chr4_2:70716072-70716091 | Msa0619590:CDS | 35.0% |
| TTATTATGTGGGTCTAGACT+AGG | - | chr4_2:70716155-70716174 | Msa0619590:CDS | 35.0% | |
| !!! | ATTTTAAAACCCCTAGGGTT+TGG | - | chr4_2:70716420-70716439 | Msa0619590:CDS | 35.0% |
| TCCTTAGATTTGTCGTTACT+TGG | - | chr4_2:70716590-70716609 | Msa0619590:CDS | 35.0% | |
| TCCAAGTAACGACAAATCTA+AGG | + | chr4_2:70716594-70716613 | None:intergenic | 35.0% | |
| CTTAAAATGTGGGCGTATAT+AGG | + | chr4_2:70716706-70716725 | None:intergenic | 35.0% | |
| ! | CTATATACGCCCACATTTTA+AGG | - | chr4_2:70716704-70716723 | Msa0619590:intron | 35.0% |
| ACTGAAACGCAGAATTGAAA+TGG | + | chr4_2:70716934-70716953 | None:intergenic | 35.0% | |
| ! | AATTCTGCGTTTCAGTTTTC+AGG | - | chr4_2:70716938-70716957 | Msa0619590:intron | 35.0% |
| TGCTATGTTGTAGAGTGTAA+TGG | + | chr4_2:70717017-70717036 | None:intergenic | 35.0% | |
| AGCTAAACATAAAGCAAGAG+GGG | + | chr4_2:70717157-70717176 | None:intergenic | 35.0% | |
| ! | ATTTTTAATCGCTGCTCACT+AGG | - | chr4_2:70717177-70717196 | Msa0619590:intron | 35.0% |
| ! | TTTTTAATCGCTGCTCACTA+GGG | - | chr4_2:70717178-70717197 | Msa0619590:intron | 35.0% |
| AAAAAATTCAAGGCTCTTCC+TGG | + | chr4_2:70717477-70717496 | None:intergenic | 35.0% | |
| ! | TTTTCTGTACATCAGAAGGT+TGG | + | chr4_2:70717696-70717715 | None:intergenic | 35.0% |
| ACATGGCAGATGAATTATTC+AGG | - | chr4_2:70717725-70717744 | Msa0619590:intron | 35.0% | |
| CATGGCAGATGAATTATTCA+GGG | - | chr4_2:70717726-70717745 | Msa0619590:intron | 35.0% | |
| ATGGCAGATGAATTATTCAG+GGG | - | chr4_2:70717727-70717746 | Msa0619590:intron | 35.0% | |
| GGACAAAATAACGCTAATGA+TGG | - | chr4_2:70717757-70717776 | Msa0619590:intron | 35.0% | |
| ! | GAAAAGGTTTAAAGCTTTCC+CGG | - | chr4_2:70717796-70717815 | Msa0619590:intron | 35.0% |
| !! | TCACGAAGTATTGTTGACTA+AGG | + | chr4_2:70717940-70717959 | None:intergenic | 35.0% |
| !! | TTACTTTTCTGAATACTGGC+AGG | - | chr4_2:70717977-70717996 | Msa0619590:intron | 35.0% |
| TTGATCCCTTACATTGTAGA+TGG | - | chr4_2:70718186-70718205 | Msa0619590:CDS | 35.0% | |
| TCCTACCATCTACAATGTAA+GGG | + | chr4_2:70718194-70718213 | None:intergenic | 35.0% | |
| GTAGGACAGAAAGGAATTTA+TGG | - | chr4_2:70718208-70718227 | Msa0619590:CDS | 35.0% | |
| ATGAATCCAAAGGACCTTAA+TGG | - | chr4_2:70718335-70718354 | Msa0619590:intron | 35.0% | |
| TGAATCCAAAGGACCTTAAT+GGG | - | chr4_2:70718336-70718355 | Msa0619590:intron | 35.0% | |
| ! | GAGGAAAGTATAAGTTATGC+TGG | + | chr4_2:70718451-70718470 | None:intergenic | 35.0% |
| ! | CCCTTCTCGTTAAACATTTT+AGG | - | chr4_2:70718876-70718895 | Msa0619590:intron | 35.0% |
| !! | TCGTTAAACATTTTAGGTGC+AGG | - | chr4_2:70718882-70718901 | Msa0619590:intron | 35.0% |
| AAGTTTATGTGCAAGAGGAA+AGG | - | chr4_2:70718910-70718929 | Msa0619590:intron | 35.0% | |
| ! | TCTCTACTTGGTGGAATAAA+TGG | - | chr4_2:70719027-70719046 | Msa0619590:intron | 35.0% |
| ! | CTCTACTTGGTGGAATAAAT+GGG | - | chr4_2:70719028-70719047 | Msa0619590:intron | 35.0% |
| ACATTTCGTTTCAAAGCCTA+TGG | - | chr4_2:70719133-70719152 | Msa0619590:intron | 35.0% | |
| ACAAGTTTCTCTAACAAACC+AGG | + | chr4_2:70719218-70719237 | None:intergenic | 35.0% | |
| CATAACAGTGGAATTGATGT+CGG | + | chr4_2:70719276-70719295 | None:intergenic | 35.0% | |
| TCAATTCCACTGTTATGCTA+TGG | - | chr4_2:70719279-70719298 | Msa0619590:intron | 35.0% | |
| !! | ACACCGACATAATTTTTCAG+TGG | + | chr4_2:70719326-70719345 | None:intergenic | 35.0% |
| TGTTCGCCATTATTCGTTTA+TGG | - | chr4_2:70719546-70719565 | Msa0619590:CDS | 35.0% | |
| GATGTGTTTACATAGAGCTT+AGG | + | chr4_2:70719933-70719952 | None:intergenic | 35.0% | |
| CAGAGCCAAAGATAAAAACA+AGG | + | chr4_2:70720002-70720021 | None:intergenic | 35.0% | |
| GCATCTTTCTGTACTAAGAT+AGG | - | chr4_2:70720145-70720164 | Msa0619590:CDS | 35.0% | |
| ! | GACTGTATTTTATGTTTCCG+AGG | - | chr4_2:70720218-70720237 | Msa0619590:CDS | 35.0% |
| ! | GTTGTATTGATGAAGACACT+TGG | - | chr4_2:70720391-70720410 | Msa0619590:intron | 35.0% |
| ATCAACCTACAAGAAGTTTG+AGG | + | chr4_2:70720512-70720531 | None:intergenic | 35.0% | |
| !! | AACTTCTTGTAGGTTGATGT+AGG | - | chr4_2:70720514-70720533 | Msa0619590:intron | 35.0% |
| TTCCTTCCAAATACAATCGA+AGG | + | chr4_2:70720558-70720577 | None:intergenic | 35.0% | |
| ! | TCTCAACTTTTATCAGCACT+CGG | - | chr4_2:70720917-70720936 | Msa0619590:intron | 35.0% |
| TAACTTTCTGTCTCTTCATC+CGG | + | chr4_2:70721189-70721208 | None:intergenic | 35.0% | |
| TCCCAAAAGATATGTTGTGT+AGG | + | chr4_2:70721373-70721392 | None:intergenic | 35.0% | |
| GAGATCGTAACCTAATCCAA+CGG | + | chr4_2:70715894-70715913 | None:intergenic | 40.0% | |
| ! | GAATTTGAGTCTGAGATCGT+TGG | + | chr4_2:70715918-70715937 | None:intergenic | 40.0% |
| GTGGTCAATAGCGATCAATT+TGG | + | chr4_2:70715954-70715973 | None:intergenic | 40.0% | |
| CATCAGAACACAATCGCATA+CGG | + | chr4_2:70716057-70716076 | None:intergenic | 40.0% | |
| ACTGAATTGACCAACCCAAA+TGG | - | chr4_2:70716372-70716391 | Msa0619590:CDS | 40.0% | |
| ! | CAACATAGCAAAGCCTTGTA+TGG | + | chr4_2:70716542-70716561 | None:intergenic | 40.0% |
| ! | CATACAAGGCTTTGCTATGT+TGG | - | chr4_2:70716540-70716559 | Msa0619590:CDS | 40.0% |
| AGATTTGTCGTTACTTGGAC+CGG | - | chr4_2:70716595-70716614 | Msa0619590:CDS | 40.0% | |
| TGGGCGTATATAGGACAATT+TGG | + | chr4_2:70716697-70716716 | None:intergenic | 40.0% | |
| TCATTGTTTGTGTGACTGAC+TGG | - | chr4_2:70716823-70716842 | Msa0619590:intron | 40.0% | |
| CATTGTTTGTGTGACTGACT+GGG | - | chr4_2:70716824-70716843 | Msa0619590:intron | 40.0% | |
| TGAACTGCTCTGACATCTAA+AGG | + | chr4_2:70716874-70716893 | None:intergenic | 40.0% | |
| !! | CGTTTCAGTTTTCAGGAGTT+TGG | - | chr4_2:70716945-70716964 | Msa0619590:intron | 40.0% |
| AACAAGCTGTTCCTTCATCA+TGG | - | chr4_2:70717074-70717093 | Msa0619590:intron | 40.0% | |
| ACAAGCTGTTCCTTCATCAT+GGG | - | chr4_2:70717075-70717094 | Msa0619590:intron | 40.0% | |
| AAACATAAAGCAAGAGGGGA+GGG | + | chr4_2:70717153-70717172 | None:intergenic | 40.0% | |
| TAAACATAAAGCAAGAGGGG+AGG | + | chr4_2:70717154-70717173 | None:intergenic | 40.0% | |
| TTTCATAAAGGGTCTGCGAA+TGG | + | chr4_2:70717434-70717453 | None:intergenic | 40.0% | |
| ATTCGCAGACCCTTTATGAA+AGG | - | chr4_2:70717433-70717452 | Msa0619590:intron | 40.0% | |
| CTGTAGTTGGGGTGAAAATA+GGG | - | chr4_2:70717626-70717645 | Msa0619590:intron | 40.0% | |
| TGTAGTTGGGGTGAAAATAG+GGG | - | chr4_2:70717627-70717646 | Msa0619590:intron | 40.0% | |
| !!! | TGAAAGAGCGCTCGTTTTAT+AGG | + | chr4_2:70717875-70717894 | None:intergenic | 40.0% |
| TCCCTTACATTGTAGATGGT+AGG | - | chr4_2:70718190-70718209 | Msa0619590:CDS | 40.0% | |
| GTCCTACCATCTACAATGTA+AGG | + | chr4_2:70718195-70718214 | None:intergenic | 40.0% | |
| TTGTAGATGGTAGGACAGAA+AGG | - | chr4_2:70718199-70718218 | Msa0619590:CDS | 40.0% | |
| TATCTCCCATTAAGGTCCTT+TGG | + | chr4_2:70718344-70718363 | None:intergenic | 40.0% | |
| ! | TTATGCTGGCTGTTAGCATA+GGG | + | chr4_2:70718437-70718456 | None:intergenic | 40.0% |
| TCCATTGTCCCTCATAAACT+GGG | + | chr4_2:70718483-70718502 | None:intergenic | 40.0% | |
| ! | TTTATGAGGGACAATGGACT+AGG | - | chr4_2:70718485-70718504 | Msa0619590:intron | 40.0% |
| ATTTACCTCTGTTTCACGGT+AGG | + | chr4_2:70718534-70718553 | None:intergenic | 40.0% | |
| GACAAGAAGGATCATGTAGT+TGG | + | chr4_2:70718582-70718601 | None:intergenic | 40.0% | |
| AACAAGCATAGGTGACAAGA+AGG | + | chr4_2:70718595-70718614 | None:intergenic | 40.0% | |
| GGCAATGCAAAAACAAGCAT+AGG | + | chr4_2:70718606-70718625 | None:intergenic | 40.0% | |
| TTTATGGCAACAGAAAACCC+AGG | + | chr4_2:70718761-70718780 | None:intergenic | 40.0% | |
| ! | TTGTTGCGTTTTCCCTAGTA+AGG | + | chr4_2:70718838-70718857 | None:intergenic | 40.0% |
| TTTATGTGCAAGAGGAAAGG+TGG | - | chr4_2:70718913-70718932 | Msa0619590:intron | 40.0% | |
| AAAATCTCAGCCACAATGAG+TGG | - | chr4_2:70718947-70718966 | Msa0619590:intron | 40.0% | |
| CCACCAAGTAGAGATGTAAT+TGG | + | chr4_2:70719021-70719040 | None:intergenic | 40.0% | |
| CCAATTACATCTCTACTTGG+TGG | - | chr4_2:70719018-70719037 | Msa0619590:intron | 40.0% | |
| ACGATGTAAGCAACTAAGCA+CGG | - | chr4_2:70719086-70719105 | Msa0619590:intron | 40.0% | |
| TGCGGTATTAGTGATTCCAT+AGG | + | chr4_2:70719152-70719171 | None:intergenic | 40.0% | |
| GATGTTCCATAGCATAACAG+TGG | + | chr4_2:70719288-70719307 | None:intergenic | 40.0% | |
| ! | TGTTGTGGCTGTAGTTTTCT+AGG | - | chr4_2:70719636-70719655 | Msa0619590:intron | 40.0% |
| CTGGTTTATCTGCAGTTAGA+AGG | + | chr4_2:70719776-70719795 | None:intergenic | 40.0% | |
| TGATGCAGTTCTTCAATTGC+TGG | + | chr4_2:70719795-70719814 | None:intergenic | 40.0% | |
| !!! | TTTTGGAGTTTCAGCTTCCA+AGG | - | chr4_2:70719817-70719836 | Msa0619590:intron | 40.0% |
| GCTCTATGTAAACACATCAC+CGG | - | chr4_2:70719935-70719954 | Msa0619590:intron | 40.0% | |
| TATAGAGAGAGCAGCATTAC+CGG | + | chr4_2:70719957-70719976 | None:intergenic | 40.0% | |
| GTAATGCTGCTCTCTCTATA+TGG | - | chr4_2:70719957-70719976 | Msa0619590:intron | 40.0% | |
| CTTAAACGGTTGTGTGAAGA+CGG | - | chr4_2:70720045-70720064 | Msa0619590:intron | 40.0% | |
| ACTGACCTCAAACTTCTTGT+AGG | - | chr4_2:70720504-70720523 | Msa0619590:intron | 40.0% | |
| AACAGGCCTTCGATTGTATT+TGG | - | chr4_2:70720549-70720568 | Msa0619590:intron | 40.0% | |
| GAGCTTCTCTCATATTTGCA+CGG | - | chr4_2:70720714-70720733 | Msa0619590:intron | 40.0% | |
| TTGTCATCGTAGGATTCAAC+AGG | + | chr4_2:70720742-70720761 | None:intergenic | 40.0% | |
| ! | TTTATCAGCACTCGGTTTTC+AGG | - | chr4_2:70720925-70720944 | Msa0619590:intron | 40.0% |
| GACACAACAGAAATGACTAG+AGG | - | chr4_2:70721057-70721076 | Msa0619590:intron | 40.0% | |
| ACAAGATTTGCCTGGTTACT+GGG | - | chr4_2:70721083-70721102 | Msa0619590:CDS | 40.0% | |
| CTCTTCATCCGGTAAAATCA+CGG | + | chr4_2:70721178-70721197 | None:intergenic | 40.0% | |
| CTTCGGATCAAGTAGTTCAA+CGG | - | chr4_2:70721244-70721263 | Msa0619590:CDS | 40.0% | |
| TTCGGATCAAGTAGTTCAAC+GGG | - | chr4_2:70721245-70721264 | Msa0619590:CDS | 40.0% | |
| TGATCAATCATGATTCCCCT+TGG | - | chr4_2:70721426-70721445 | Msa0619590:five_prime_UTR | 40.0% | |
| ATACAGACACAAAGACCAAG+GGG | + | chr4_2:70721444-70721463 | None:intergenic | 40.0% | |
| CATACAGACACAAAGACCAA+GGG | + | chr4_2:70721445-70721464 | None:intergenic | 40.0% | |
| ACATACAGACACAAAGACCA+AGG | + | chr4_2:70721446-70721465 | None:intergenic | 40.0% | |
| !! | AGAAAGCGTCCAAGGATGTT+TGG | + | chr4_2:70715691-70715710 | None:intergenic | 45.0% |
| !! | AGAAGAGAAGAAAGCGTCCA+AGG | + | chr4_2:70715699-70715718 | None:intergenic | 45.0% |
| GGACAGCACTTTCTTCTTAC+TGG | + | chr4_2:70715852-70715871 | None:intergenic | 45.0% | |
| CAACAGTACGAAGATTGTCG+TGG | + | chr4_2:70715973-70715992 | None:intergenic | 45.0% | |
| TTGGGAATTGAAACACGACC+AGG | + | chr4_2:70716001-70716020 | None:intergenic | 45.0% | |
| ACACAGGAATTGTTGGCACA+TGG | + | chr4_2:70716510-70716529 | None:intergenic | 45.0% | |
| TGTGCCAACAATTCCTGTGT+TGG | - | chr4_2:70716510-70716529 | Msa0619590:CDS | 45.0% | |
| GTGCCAACAATTCCTGTGTT+GGG | - | chr4_2:70716511-70716530 | Msa0619590:CDS | 45.0% | |
| ! | TAGCAAAGCCTTGTATGGAC+TGG | + | chr4_2:70716537-70716556 | None:intergenic | 45.0% |
| CAATTCCACTGTCCATTTGC+GGG | + | chr4_2:70716569-70716588 | None:intergenic | 45.0% | |
| CCAATTCCACTGTCCATTTG+CGG | + | chr4_2:70716570-70716589 | None:intergenic | 45.0% | |
| CTGTCTGGTAAGATTCCAAC+AGG | - | chr4_2:70716908-70716927 | Msa0619590:intron | 45.0% | |
| GCAGAATTGAAATGGCCTGT+TGG | + | chr4_2:70716926-70716945 | None:intergenic | 45.0% | |
| ACCAAGAGTCTTGCTTTCGA+TGG | - | chr4_2:70716986-70717005 | Msa0619590:intron | 45.0% | |
| AACATAAAGCAAGAGGGGAG+GGG | + | chr4_2:70717152-70717171 | None:intergenic | 45.0% | |
| ! | AACACTGACTGACATCGGTA+GGG | + | chr4_2:70717405-70717424 | None:intergenic | 45.0% |
| ! | ACCAGAACACTGACTGACAT+CGG | + | chr4_2:70717410-70717429 | None:intergenic | 45.0% |
| GGAGTGAGGCCTTTCATAAA+GGG | + | chr4_2:70717445-70717464 | None:intergenic | 45.0% | |
| TATGGAACCCATGCTGTAGT+TGG | - | chr4_2:70717613-70717632 | Msa0619590:intron | 45.0% | |
| ATGGAACCCATGCTGTAGTT+GGG | - | chr4_2:70717614-70717633 | Msa0619590:intron | 45.0% | |
| TTTCACCCCAACTACAGCAT+GGG | + | chr4_2:70717623-70717642 | None:intergenic | 45.0% | |
| ! | TTTTCACCCCAACTACAGCA+TGG | + | chr4_2:70717624-70717643 | None:intergenic | 45.0% |
| GCTGTAGTTGGGGTGAAAAT+AGG | - | chr4_2:70717625-70717644 | Msa0619590:intron | 45.0% | |
| GTAGTTGGGGTGAAAATAGG+GGG | - | chr4_2:70717628-70717647 | Msa0619590:intron | 45.0% | |
| TGTACATCAGAAGGTTGGAG+AGG | + | chr4_2:70717691-70717710 | None:intergenic | 45.0% | |
| AGATGAATTATTCAGGGGCC+AGG | - | chr4_2:70717732-70717751 | Msa0619590:intron | 45.0% | |
| !! | TAGCGTTATTTTGTCCAGCC+TGG | + | chr4_2:70717753-70717772 | None:intergenic | 45.0% |
| GAATACTGGCAGGTGAACTA+TGG | - | chr4_2:70717987-70718006 | Msa0619590:intron | 45.0% | |
| ! | GTTATGCTGGCTGTTAGCAT+AGG | + | chr4_2:70718438-70718457 | None:intergenic | 45.0% |
| ATAAACTGGGGGGAAAAGAG+AGG | + | chr4_2:70718470-70718489 | None:intergenic | 45.0% | |
| ! | TCTTTTCCCCCCAGTTTATG+AGG | - | chr4_2:70718471-70718490 | Msa0619590:intron | 45.0% |
| ! | CTTTTCCCCCCAGTTTATGA+GGG | - | chr4_2:70718472-70718491 | Msa0619590:intron | 45.0% |
| ATTGTCCCTCATAAACTGGG+GGG | + | chr4_2:70718480-70718499 | None:intergenic | 45.0% | |
| CATTGTCCCTCATAAACTGG+GGG | + | chr4_2:70718481-70718500 | None:intergenic | 45.0% | |
| CCATTGTCCCTCATAAACTG+GGG | + | chr4_2:70718482-70718501 | None:intergenic | 45.0% | |
| GTCCATTGTCCCTCATAAAC+TGG | + | chr4_2:70718484-70718503 | None:intergenic | 45.0% | |
| AGGATTGAGCTTGAATGTCC+AGG | + | chr4_2:70718514-70718533 | None:intergenic | 45.0% | |
| TCAATCCTACCGTGAAACAG+AGG | - | chr4_2:70718526-70718545 | Msa0619590:intron | 45.0% | |
| TGCAAGAGGAAAGGTGGAAA+TGG | - | chr4_2:70718919-70718938 | Msa0619590:intron | 45.0% | |
| GCAAGAGGAAAGGTGGAAAT+GGG | - | chr4_2:70718920-70718939 | Msa0619590:intron | 45.0% | |
| CAGTTTGACACCACTCATTG+TGG | + | chr4_2:70718960-70718979 | None:intergenic | 45.0% | |
| CTTGGTGGAATAAATGGGAG+TGG | - | chr4_2:70719033-70719052 | Msa0619590:intron | 45.0% | |
| TGCTAGATACACTGTTCTCC+TGG | - | chr4_2:70719197-70719216 | Msa0619590:intron | 45.0% | |
| AAACTACCCAAAGGAGTGGA+GGG | + | chr4_2:70719475-70719494 | None:intergenic | 45.0% | |
| TGTCAAACTACCCAAAGGAG+TGG | + | chr4_2:70719479-70719498 | None:intergenic | 45.0% | |
| TCCTTTGGGTAGTTTGACAG+TGG | - | chr4_2:70719480-70719499 | Msa0619590:CDS | 45.0% | |
| ACCACTGTCAAACTACCCAA+AGG | + | chr4_2:70719484-70719503 | None:intergenic | 45.0% | |
| TTTGGGTAGTTTGACAGTGG+TGG | - | chr4_2:70719483-70719502 | Msa0619590:CDS | 45.0% | |
| TTGGGTAGTTTGACAGTGGT+GGG | - | chr4_2:70719484-70719503 | Msa0619590:CDS | 45.0% | |
| ! | GTTTGACAGTGGTGGGAAAA+TGG | - | chr4_2:70719491-70719510 | Msa0619590:CDS | 45.0% |
| AGTTTCAGCTTCCAAGGCAA+TGG | - | chr4_2:70719823-70719842 | Msa0619590:intron | 45.0% | |
| GTTTCAGCTTCCAAGGCAAT+GGG | - | chr4_2:70719824-70719843 | Msa0619590:intron | 45.0% | |
| CTTCTTCCTATCAGGACCAA+GGG | + | chr4_2:70719871-70719890 | None:intergenic | 45.0% | |
| ACTTCTTCCTATCAGGACCA+AGG | + | chr4_2:70719872-70719891 | None:intergenic | 45.0% | |
| !! | AGATTTTGGTCGTCAACGCT+CGG | + | chr4_2:70720290-70720309 | None:intergenic | 45.0% |
| GTAGGAATGAAGCCTGTAAC+AGG | - | chr4_2:70720532-70720551 | Msa0619590:intron | 45.0% | |
| TACAATCGAAGGCCTGTTAC+AGG | + | chr4_2:70720547-70720566 | None:intergenic | 45.0% | |
| GGCCTTCGATTGTATTTGGA+AGG | - | chr4_2:70720553-70720572 | Msa0619590:intron | 45.0% | |
| CAGTTGGAATGTCTTAGGGA+GGG | + | chr4_2:70720623-70720642 | None:intergenic | 45.0% | |
| CCTCCAGTTGGAATGTCTTA+GGG | + | chr4_2:70720627-70720646 | None:intergenic | 45.0% | |
| TCCTCCAGTTGGAATGTCTT+AGG | + | chr4_2:70720628-70720647 | None:intergenic | 45.0% | |
| TATGAGAGAAGCTCTTCCAC+TGG | + | chr4_2:70720708-70720727 | None:intergenic | 45.0% | |
| !! | ACTGGTGCTCACTTTGAAGT+GGG | - | chr4_2:70720772-70720791 | Msa0619590:intron | 45.0% |
| !! | CACTTTGAAGTGGGAGAAAC+TGG | - | chr4_2:70720781-70720800 | Msa0619590:intron | 45.0% |
| GAGTTCACATTTACGTCCGA+TGG | + | chr4_2:70720976-70720995 | None:intergenic | 45.0% | |
| GTGAACTCTGCTTTATACCC+TGG | - | chr4_2:70720988-70721007 | Msa0619590:intron | 45.0% | |
| AACTCTGCTTTATACCCTGG+AGG | - | chr4_2:70720991-70721010 | Msa0619590:intron | 45.0% | |
| ACTCTGCTTTATACCCTGGA+GGG | - | chr4_2:70720992-70721011 | Msa0619590:intron | 45.0% | |
| CAGTAACCAGGCAAATCTTG+TGG | + | chr4_2:70721084-70721103 | None:intergenic | 45.0% | |
| CACAAGATTTGCCTGGTTAC+TGG | - | chr4_2:70721082-70721101 | Msa0619590:CDS | 45.0% | |
| ! | GCAAGGCTTTATGTCGAGAA+GGG | - | chr4_2:70721117-70721136 | Msa0619590:CDS | 45.0% |
| !!! | TTCATTTAATTTTTTAAAAT+TGG | - | chr4_2:70718248-70718267 | Msa0619590:CDS | 5.0% |
| !!! | TCATTTAATTTTTTAAAATT+GGG | - | chr4_2:70718249-70718268 | Msa0619590:CDS | 5.0% |
| CTTCGTACTGTTGAGCTTCC+TGG | - | chr4_2:70715980-70715999 | Msa0619590:CDS | 50.0% | |
| ! | CTAGAGAGGAGCACACTTCT+AGG | + | chr4_2:70716469-70716488 | None:intergenic | 50.0% |
| ! | CTAGAAGTGTGCTCCTCTCT+AGG | - | chr4_2:70716467-70716486 | Msa0619590:CDS | 50.0% |
| TTCAAACCCGAGACCTAGAG+AGG | + | chr4_2:70716483-70716502 | None:intergenic | 50.0% | |
| CAGGAATTGTTGGCACATGG+AGG | + | chr4_2:70716507-70716526 | None:intergenic | 50.0% | |
| TGGCCCAACACAGGAATTGT+TGG | + | chr4_2:70716517-70716536 | None:intergenic | 50.0% | |
| !! | CTATGTTGGCTTCCCGCAAA+TGG | - | chr4_2:70716554-70716573 | Msa0619590:CDS | 50.0% |
| CCGCAAATGGACAGTGGAAT+TGG | - | chr4_2:70716567-70716586 | Msa0619590:CDS | 50.0% | |
| GATGTCAGAGCAGTTCAACC+AGG | - | chr4_2:70716877-70716896 | Msa0619590:intron | 50.0% | |
| GCCATCGAAAGCAAGACTCT+TGG | + | chr4_2:70716990-70717009 | None:intergenic | 50.0% | |
| ! | AAAGTACCTTGCCAGTGCAG+CGG | + | chr4_2:70717104-70717123 | None:intergenic | 50.0% |
| ! | GAACACTGACTGACATCGGT+AGG | + | chr4_2:70717406-70717425 | None:intergenic | 50.0% |
| ACCGATGTCAGTCAGTGTTC+TGG | - | chr4_2:70717406-70717425 | Msa0619590:intron | 50.0% | |
| GGGAGTGAGGCCTTTCATAA+AGG | + | chr4_2:70717446-70717465 | None:intergenic | 50.0% | |
| TGGAACCCATGCTGTAGTTG+GGG | - | chr4_2:70717615-70717634 | Msa0619590:intron | 50.0% | |
| CCCCAGTTTATGAGGGACAA+TGG | - | chr4_2:70718479-70718498 | Msa0619590:intron | 50.0% | |
| !! | GGACAATGGACTAGGATTCC+TGG | - | chr4_2:70718493-70718512 | Msa0619590:intron | 50.0% |
| AACTACCCAAAGGAGTGGAG+GGG | + | chr4_2:70719474-70719493 | None:intergenic | 50.0% | |
| CAAACTACCCAAAGGAGTGG+AGG | + | chr4_2:70719476-70719495 | None:intergenic | 50.0% | |
| ! | GTGGTGGGAAAATGGAAACG+AGG | - | chr4_2:70719499-70719518 | Msa0619590:CDS | 50.0% |
| GGCAAGCTCACCAAATACAG+GGG | + | chr4_2:70719850-70719869 | None:intergenic | 50.0% | |
| GGGCAAGCTCACCAAATACA+GGG | + | chr4_2:70719851-70719870 | None:intergenic | 50.0% | |
| AGGGCAAGCTCACCAAATAC+AGG | + | chr4_2:70719852-70719871 | None:intergenic | 50.0% | |
| ! | GTATTTGGTGAGCTTGCCCT+TGG | - | chr4_2:70719852-70719871 | Msa0619590:intron | 50.0% |
| CTCTGCGACTTCTTCCTATC+AGG | + | chr4_2:70719879-70719898 | None:intergenic | 50.0% | |
| CTTGTGTGACAGAGCATGCT+AGG | + | chr4_2:70720095-70720114 | None:intergenic | 50.0% | |
| !! | ATTTTGGTCGTCAACGCTCG+GGG | + | chr4_2:70720288-70720307 | None:intergenic | 50.0% |
| !! | GATTTTGGTCGTCAACGCTC+GGG | + | chr4_2:70720289-70720308 | None:intergenic | 50.0% |
| TTGGAATGTCTTAGGGAGGG+AGG | + | chr4_2:70720620-70720639 | None:intergenic | 50.0% | |
| CCAGTTGGAATGTCTTAGGG+AGG | + | chr4_2:70720624-70720643 | None:intergenic | 50.0% | |
| CCTCCCTAAGACATTCCAAC+TGG | - | chr4_2:70720621-70720640 | Msa0619590:intron | 50.0% | |
| CCCTAAGACATTCCAACTGG+AGG | - | chr4_2:70720624-70720643 | Msa0619590:intron | 50.0% | |
| CACAACAGCGTTGTCATCGT+AGG | + | chr4_2:70720752-70720771 | None:intergenic | 50.0% | |
| GATGACAACGCTGTTGTGAC+TGG | - | chr4_2:70720754-70720773 | Msa0619590:intron | 50.0% | |
| ! | GACTGGTGCTCACTTTGAAG+TGG | - | chr4_2:70720771-70720790 | Msa0619590:intron | 50.0% |
| ! | GGGAGAAACTGGTCTGAAGA+AGG | - | chr4_2:70720792-70720811 | Msa0619590:intron | 50.0% |
| CCAGATTTCTGAGTCAAGCC+AGG | + | chr4_2:70720892-70720911 | None:intergenic | 50.0% | |
| ! | CCTGGCTTGACTCAGAAATC+TGG | - | chr4_2:70720889-70720908 | Msa0619590:intron | 50.0% |
| ACATTTACGTCCGATGGCTG+TGG | + | chr4_2:70720970-70720989 | None:intergenic | 50.0% | |
| AGAAGTTTAGGTGCCTGAGC+AGG | + | chr4_2:70721027-70721046 | None:intergenic | 50.0% | |
| AGAGGACCACAAGATTTGCC+TGG | - | chr4_2:70721075-70721094 | Msa0619590:intron | 50.0% | |
| ! | GGCAAGGCTTTATGTCGAGA+AGG | - | chr4_2:70721116-70721135 | Msa0619590:CDS | 50.0% |
| ! | CCTGCTGGTGTAGGCTTTTG+CGG | - | chr4_2:70716443-70716462 | Msa0619590:CDS | 55.0% |
| GTGTGCTCCTCTCTAGGTCT+CGG | - | chr4_2:70716473-70716492 | Msa0619590:CDS | 55.0% | |
| TGTGCTCCTCTCTAGGTCTC+GGG | - | chr4_2:70716474-70716493 | Msa0619590:CDS | 55.0% | |
| !! | TGTATGGACTGGCCCAACAC+AGG | + | chr4_2:70716526-70716545 | None:intergenic | 55.0% |
| GTGTTGGGCCAGTCCATACA+AGG | - | chr4_2:70716526-70716545 | Msa0619590:CDS | 55.0% | |
| GTCAGAGCAGTTCAACCAGG+AGG | - | chr4_2:70716880-70716899 | Msa0619590:intron | 55.0% | |
| !! | AACCAGGAGGTGTCACTGTC+TGG | - | chr4_2:70716893-70716912 | Msa0619590:intron | 55.0% |
| TACCAGACAGTGACACCTCC+TGG | + | chr4_2:70716898-70716917 | None:intergenic | 55.0% | |
| AAGTACCTTGCCAGTGCAGC+GGG | + | chr4_2:70717103-70717122 | None:intergenic | 55.0% | |
| ATAAAGCAAGAGGGGAGGGG+AGG | + | chr4_2:70717149-70717168 | None:intergenic | 55.0% | |
| AGGCTCTTCCTGGTTGAGAG+CGG | + | chr4_2:70717467-70717486 | None:intergenic | 55.0% | |
| GAATTATTCAGGGGCCAGGC+TGG | - | chr4_2:70717736-70717755 | Msa0619590:intron | 55.0% | |
| CTTCACCCCTCCACTCCTTT+GGG | - | chr4_2:70719466-70719485 | Msa0619590:CDS | 55.0% | |
| AATACAGGGGCCCATTGCCT+TGG | + | chr4_2:70719837-70719856 | None:intergenic | 55.0% | |
| AGGCAATGGGCCCCTGTATT+TGG | - | chr4_2:70719837-70719856 | Msa0619590:intron | 55.0% | |
| AGCTTGCCCTTGGTCCTGAT+AGG | - | chr4_2:70719862-70719881 | Msa0619590:intron | 55.0% | |
| CAAGGGTGAAACGAAGCCCT+CGG | + | chr4_2:70720238-70720257 | None:intergenic | 55.0% | |
| CGTCAACGCTCGGGGTTATT+GGG | + | chr4_2:70720280-70720299 | None:intergenic | 55.0% | |
| TCGTCAACGCTCGGGGTTAT+TGG | + | chr4_2:70720281-70720300 | None:intergenic | 55.0% | |
| !! | GGGAGGAGAGGTGCTGTAAA+TGG | + | chr4_2:70720603-70720622 | None:intergenic | 55.0% |
| ATGTCTTAGGGAGGGAGGAG+AGG | + | chr4_2:70720615-70720634 | None:intergenic | 55.0% | |
| CCAGGAGAACCATCCCATTC+CGG | + | chr4_2:70720874-70720893 | None:intergenic | 55.0% | |
| TTTACGTCCGATGGCTGTGG+TGG | + | chr4_2:70720967-70720986 | None:intergenic | 55.0% | |
| GCCTGGTTACTGGGTTGTGT+CGG | - | chr4_2:70721092-70721111 | Msa0619590:CDS | 55.0% | |
| CCTGGTTACTGGGTTGTGTC+GGG | - | chr4_2:70721093-70721112 | Msa0619590:CDS | 55.0% | |
| CTGGTTACTGGGTTGTGTCG+GGG | - | chr4_2:70721094-70721113 | Msa0619590:CDS | 55.0% | |
| TGGTTACTGGGTTGTGTCGG+GGG | - | chr4_2:70721095-70721114 | Msa0619590:CDS | 55.0% | |
| ACCAGCAGGCCAAACCCTAG+GGG | + | chr4_2:70716432-70716451 | None:intergenic | 60.0% | |
| CACCAGCAGGCCAAACCCTA+GGG | + | chr4_2:70716433-70716452 | None:intergenic | 60.0% | |
| ACACCAGCAGGCCAAACCCT+AGG | + | chr4_2:70716434-70716453 | None:intergenic | 60.0% | |
| AGGGTTTGGCCTGCTGGTGT+AGG | - | chr4_2:70716434-70716453 | Msa0619590:CDS | 60.0% | |
| CCGCAAAAGCCTACACCAGC+AGG | + | chr4_2:70716446-70716465 | None:intergenic | 60.0% | |
| GGCTTCCCGCAAATGGACAG+TGG | - | chr4_2:70716561-70716580 | Msa0619590:CDS | 60.0% | |
| GCAGCGGGATCCCATGATGA+AGG | + | chr4_2:70717088-70717107 | None:intergenic | 60.0% | |
| ATCATGGGATCCCGCTGCAC+TGG | - | chr4_2:70717090-70717109 | Msa0619590:intron | 60.0% | |
| GGCTCTTCCTGGTTGAGAGC+GGG | + | chr4_2:70717466-70717485 | None:intergenic | 60.0% | |
| GCTTCACCCCTCCACTCCTT+TGG | - | chr4_2:70719465-70719484 | Msa0619590:CDS | 60.0% | |
| CGCTCTCACACGGGATGCAT+TGG | + | chr4_2:70720851-70720870 | None:intergenic | 60.0% | |
| CCGGAATGGGATGGTTCTCC+TGG | - | chr4_2:70720871-70720890 | Msa0619590:intron | 60.0% | |
| !!! | TGTGGTGGCGGCAGCTTTTG+TGG | + | chr4_2:70720952-70720971 | None:intergenic | 60.0% |
| TTAGGTGCCTGAGCAGGCAC+AGG | + | chr4_2:70721021-70721040 | None:intergenic | 60.0% | |
| CCCGACACAACCCAGTAACC+AGG | + | chr4_2:70721096-70721115 | None:intergenic | 60.0% | |
| ACCCCTAGGGTTTGGCCTGC+TGG | - | chr4_2:70716428-70716447 | Msa0619590:CDS | 65.0% | |
| CCTGGTTGAGAGCGGGAGTG+AGG | + | chr4_2:70717459-70717478 | None:intergenic | 65.0% | |
| CCTCACTCCCGCTCTCAACC+AGG | - | chr4_2:70717456-70717475 | Msa0619590:intron | 65.0% | |
| ! | TGCATCCCGTGTGAGAGCGC+CGG | - | chr4_2:70720852-70720871 | Msa0619590:intron | 65.0% |
| CCATTCCGGCGCTCTCACAC+GGG | + | chr4_2:70720860-70720879 | None:intergenic | 65.0% | |
| CCCATTCCGGCGCTCTCACA+CGG | + | chr4_2:70720861-70720880 | None:intergenic | 65.0% | |
| !! | CCGTGTGAGAGCGCCGGAAT+GGG | - | chr4_2:70720858-70720877 | Msa0619590:intron | 65.0% |
| !! | GTGAGAGCGCCGGAATGGGA+TGG | - | chr4_2:70720862-70720881 | Msa0619590:intron | 65.0% |
| ACGTCCGATGGCTGTGGTGG+CGG | + | chr4_2:70720964-70720983 | None:intergenic | 65.0% | |
| ACTGGGTTGTGTCGGGGGCA+AGG | - | chr4_2:70721100-70721119 | Msa0619590:CDS | 65.0% | |
| ! | GGGATCCCGCTGCACTGGCA+AGG | - | chr4_2:70717095-70717114 | Msa0619590:intron | 70.0% |
| !! | CCCGTGTGAGAGCGCCGGAA+TGG | - | chr4_2:70720857-70720876 | Msa0619590:intron | 70.0% |
| GCTGCCGCCACCACAGCCAT+CGG | - | chr4_2:70720957-70720976 | Msa0619590:intron | 70.0% | |
| CAGGCACAGGAGGCCCTCCA+GGG | + | chr4_2:70721008-70721027 | None:intergenic | 70.0% | |
| AGGGCCTCCTGTGCCTGCTC+AGG | - | chr4_2:70721011-70721030 | Msa0619590:intron | 70.0% | |
| GGTGCCTGAGCAGGCACAGG+AGG | + | chr4_2:70721018-70721037 | None:intergenic | 70.0% | |
| GCAGGCACAGGAGGCCCTCC+AGG | + | chr4_2:70721009-70721028 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 70715655 | 70721520 | 70715655 | ID=Msa0619590;Name=Msa0619590 |
| chr4_2 | mRNA | 70715655 | 70721520 | 70715655 | ID=Msa0619590-mRNA-1;Parent=Msa0619590;Name=Msa0619590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=190|1|1|1|1|1|7|308|600 |
| chr4_2 | exon | 70715655 | 70716649 | 70715655 | ID=Msa0619590-mRNA-1:exon:20748;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70717219 | 70717388 | 70717219 | ID=Msa0619590-mRNA-1:exon:20747;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70718085 | 70718277 | 70718085 | ID=Msa0619590-mRNA-1:exon:20746;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70718628 | 70718690 | 70718628 | ID=Msa0619590-mRNA-1:exon:20745;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70719374 | 70719575 | 70719374 | ID=Msa0619590-mRNA-1:exon:20744;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70720059 | 70720297 | 70720059 | ID=Msa0619590-mRNA-1:exon:20743;Parent=Msa0619590-mRNA-1 |
| chr4_2 | exon | 70721082 | 70721520 | 70721082 | ID=Msa0619590-mRNA-1:exon:20742;Parent=Msa0619590-mRNA-1 |
| chr4_2 | five_prime_UTR | 70721331 | 70721520 | 70721331 | ID=Msa0619590-mRNA-1:five_prime_utr;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70721082 | 70721330 | 70721082 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70720059 | 70720297 | 70720059 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70719374 | 70719575 | 70719374 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70718628 | 70718690 | 70718628 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70718085 | 70718277 | 70718085 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70717219 | 70717388 | 70717219 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | CDS | 70715963 | 70716649 | 70715963 | ID=Msa0619590-mRNA-1:cds;Parent=Msa0619590-mRNA-1 |
| chr4_2 | three_prime_UTR | 70715655 | 70715962 | 70715655 | ID=Msa0619590-mRNA-1:three_prime_utr;Parent=Msa0619590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
