AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0335780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0335780 MtrunA17_Chr2g0321051 99.099 111 1 0 1 111 1 111 4.75e-75 217
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0335780 AT5G22580.1 65.657 99 34 0 7 105 6 104 5.51e-42 134
Msa0335780 AT3G17210.1 42.000 100 54 2 8 104 9 107 3.51e-22 84.0
Msa0335780 AT3G17210.2 42.000 100 54 2 8 104 9 107 3.51e-22 84.0

Find 45 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATATATAAGCACAATTT+AGG 0.149609 2_4:+54942447 None:intergenic
GATTATGCTGCTTCCTTAAC+TGG 0.195704 2_4:+54941449 None:intergenic
CTAAATTGTGCTTATATATT+AGG 0.202013 2_4:-54942446 Msa0335780:five_prime_UTR
CTGTTAAATTATAGTAAAAT+TGG 0.209409 2_4:-54941109 Msa0335780:three_prime_UTR
AGAAGTTACATAATTGATTA+TGG 0.298058 2_4:-54942547 Msa0335780:five_prime_UTR
TACAAAAGGGATGGAGAAAT+TGG 0.322091 2_4:-54942322 Msa0335780:CDS
AATCATATCCATTGATTAGA+AGG 0.325835 2_4:+54941247 None:intergenic
AATAATGAATTATTTATTGT+TGG 0.369546 2_4:+54941408 None:intergenic
TAATATATAAGCACAATTTA+GGG 0.373646 2_4:+54942448 None:intergenic
AAGCTTTACTTCACAAAGAA+TGG 0.408647 2_4:-54942412 Msa0335780:exon
ATTTGTATGGTAAAAGATAA+GGG 0.415631 2_4:-54941274 Msa0335780:three_prime_UTR
AGGGTTTGCCTTCTAATCAA+TGG 0.422168 2_4:-54941255 Msa0335780:three_prime_UTR
ATCTTGTCAAATCCTTTGAA+TGG 0.422994 2_4:-54942287 Msa0335780:intron
AACTGGCTTGACAAGGGTTG+AGG 0.423667 2_4:+54941466 None:intergenic
AACCCTTGTCAAGCCAGTTA+AGG 0.431460 2_4:-54941462 Msa0335780:CDS
CTTCCTTAACTGGCTTGACA+AGG 0.454173 2_4:+54941459 None:intergenic
CTTGTTGAATGTCATCAAGA+AGG 0.457412 2_4:+54941586 None:intergenic
GTGATTGTTAAGTTCAAAGA+AGG 0.458164 2_4:-54942363 Msa0335780:CDS
GTGAAGTAAAGCTTGCTACT+AGG 0.467741 2_4:+54942421 None:intergenic
ATTACTGAACTACGAACAAA+AGG 0.471004 2_4:+54941339 None:intergenic
TATTTGTATGGTAAAAGATA+AGG 0.471222 2_4:-54941275 Msa0335780:three_prime_UTR
GTAGTGGAAGAGCTTACAAA+AGG 0.480357 2_4:-54942336 Msa0335780:CDS
GTTCAAAGAAGGTGTAGTAG+TGG 0.481023 2_4:-54942352 Msa0335780:CDS
GACTCATTTCATTACTATGT+TGG 0.483365 2_4:+54942524 None:intergenic
TCAGAGAACTCAACATGACT+TGG 0.494285 2_4:+54941533 None:intergenic
ACTGGCTTGACAAGGGTTGA+GGG 0.505995 2_4:+54941467 None:intergenic
CGTTGACACATGTTGGACAT+TGG 0.516806 2_4:-54942592 Msa0335780:five_prime_UTR
AACCTTGTCTCAACACATCT+AGG 0.520013 2_4:+54941618 None:intergenic
AAGCACAATTTAGGGTTCAA+AGG 0.525734 2_4:+54942456 None:intergenic
ATAGTAATGAAATGAGTCGT+GGG 0.527643 2_4:-54942519 Msa0335780:five_prime_UTR
TCTGTACTGTGATATTTGTA+TGG 0.531843 2_4:-54941287 Msa0335780:three_prime_UTR
TTTCTAATCATACAGGGGAC+AGG 0.545053 2_4:-54941651 Msa0335780:intron
TATTAGACGTTGACACATGT+TGG 0.550823 2_4:-54942599 Msa0335780:five_prime_UTR
ATTGACAGATCAAGACAGTA+AGG 0.554102 2_4:-54942487 Msa0335780:five_prime_UTR
AGAACTCAACATGACTTGGA+TGG 0.554383 2_4:+54941537 None:intergenic
TTCACAAAGAATGGTAGTCA+TGG 0.559784 2_4:-54942403 Msa0335780:exon
TTCCTTAACTGGCTTGACAA+GGG 0.564730 2_4:+54941460 None:intergenic
AGCCTAGATGTGTTGAGACA+AGG 0.579475 2_4:-54941620 Msa0335780:CDS
CTGGCTTGACAAGGGTTGAG+GGG 0.581401 2_4:+54941468 None:intergenic
TAGTGGAAGAGCTTACAAAA+GGG 0.588758 2_4:-54942335 Msa0335780:CDS
GGAAGAGCTTACAAAAGGGA+TGG 0.589362 2_4:-54942331 Msa0335780:CDS
CATAGTAATGAAATGAGTCG+TGG 0.608824 2_4:-54942520 Msa0335780:five_prime_UTR
GTATAAGACATACCATTCAA+AGG 0.611465 2_4:+54942275 None:intergenic
ACAAAGAATGGTAGTCATGG+AGG 0.636423 2_4:-54942400 Msa0335780:exon
TAGTAATGAAATGAGTCGTG+GGG 0.683523 2_4:-54942518 Msa0335780:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACAATTATTTATATTGA+CGG + chr2_4:54941869-54941888 None:intergenic 10.0%
!! AATAATGAATTATTTATTGT+TGG + chr2_4:54942295-54942314 None:intergenic 10.0%
!! TATACAATTATTTATATTGA+CGG + chr2_4:54941869-54941888 None:intergenic 10.0%
!! AATAATGAATTATTTATTGT+TGG + chr2_4:54942295-54942314 None:intergenic 10.0%
!! TAATATATAAGCACAATTTA+GGG + chr2_4:54941255-54941274 None:intergenic 15.0%
!!! ACATAAAAAAATTTGATTTC+AGG - chr2_4:54941778-54941797 Msa0335780:intron 15.0%
!! AATTACTAGTTATAAGTAAT+CGG - chr2_4:54941931-54941950 Msa0335780:intron 15.0%
!! CTGTTAAATTATAGTAAAAT+TGG - chr2_4:54942591-54942610 Msa0335780:five_prime_UTR 15.0%
!! TAATATATAAGCACAATTTA+GGG + chr2_4:54941255-54941274 None:intergenic 15.0%
!!! ACATAAAAAAATTTGATTTC+AGG - chr2_4:54941778-54941797 Msa0335780:intron 15.0%
!! AATTACTAGTTATAAGTAAT+CGG - chr2_4:54941931-54941950 Msa0335780:intron 15.0%
!! CTGTTAAATTATAGTAAAAT+TGG - chr2_4:54942591-54942610 Msa0335780:five_prime_UTR 15.0%
!! AGAAGTTACATAATTGATTA+TGG - chr2_4:54941153-54941172 Msa0335780:three_prime_UTR 20.0%
!! CTAATATATAAGCACAATTT+AGG + chr2_4:54941256-54941275 None:intergenic 20.0%
!! CTAAATTGTGCTTATATATT+AGG - chr2_4:54941254-54941273 Msa0335780:three_prime_UTR 20.0%
!! TATAAATCTCAGTAAAATCA+TGG + chr2_4:54941717-54941736 None:intergenic 20.0%
!! ACTGAGATTTATAGTTAAAT+AGG - chr2_4:54941724-54941743 Msa0335780:intron 20.0%
!! ATATGATAGTACTATAAAGA+GGG + chr2_4:54942021-54942040 None:intergenic 20.0%
!! TATTTGTATGGTAAAAGATA+AGG - chr2_4:54942425-54942444 Msa0335780:five_prime_UTR 20.0%
!! ATTTGTATGGTAAAAGATAA+GGG - chr2_4:54942426-54942445 Msa0335780:five_prime_UTR 20.0%
!! AGAAGTTACATAATTGATTA+TGG - chr2_4:54941153-54941172 Msa0335780:three_prime_UTR 20.0%
!! CTAATATATAAGCACAATTT+AGG + chr2_4:54941256-54941275 None:intergenic 20.0%
!! CTAAATTGTGCTTATATATT+AGG - chr2_4:54941254-54941273 Msa0335780:three_prime_UTR 20.0%
!! TATAAATCTCAGTAAAATCA+TGG + chr2_4:54941717-54941736 None:intergenic 20.0%
!! ACTGAGATTTATAGTTAAAT+AGG - chr2_4:54941724-54941743 Msa0335780:intron 20.0%
!! ATATGATAGTACTATAAAGA+GGG + chr2_4:54942021-54942040 None:intergenic 20.0%
!! TATTTGTATGGTAAAAGATA+AGG - chr2_4:54942425-54942444 Msa0335780:five_prime_UTR 20.0%
!! ATTTGTATGGTAAAAGATAA+GGG - chr2_4:54942426-54942445 Msa0335780:five_prime_UTR 20.0%
! ATCAAAGGTTAATAAACTGA+AGG + chr2_4:54941525-54941544 None:intergenic 25.0%
! AAAAACACTATCTGTATCAA+AGG + chr2_4:54941540-54941559 None:intergenic 25.0%
! TCTGTTATCTAATATATCAG+TGG + chr2_4:54941574-54941593 None:intergenic 25.0%
! AAACAGAAATACAAGAACAA+GGG - chr2_4:54941593-54941612 Msa0335780:CDS 25.0%
! TCTCATGTACTTAAATATCA+AGG - chr2_4:54941648-54941667 Msa0335780:intron 25.0%
!!! AATATCAAGGTTTTAGATTG+AGG - chr2_4:54941661-54941680 Msa0335780:intron 25.0%
!!! ATTTTTTTATGTTTTCGCGT+TGG + chr2_4:54941770-54941789 None:intergenic 25.0%
! ATGTGACGATTATGATTATT+TGG - chr2_4:54941970-54941989 Msa0335780:intron 25.0%
! GATATGATAGTACTATAAAG+AGG + chr2_4:54942022-54942041 None:intergenic 25.0%
! ATAAAGCTTTCTAATCATAC+AGG - chr2_4:54942042-54942061 Msa0335780:intron 25.0%
! TAAAGCTTTCTAATCATACA+GGG - chr2_4:54942043-54942062 Msa0335780:intron 25.0%
!! AATCATATCCATTGATTAGA+AGG + chr2_4:54942456-54942475 None:intergenic 25.0%
! ATCAAAGGTTAATAAACTGA+AGG + chr2_4:54941525-54941544 None:intergenic 25.0%
! AAAAACACTATCTGTATCAA+AGG + chr2_4:54941540-54941559 None:intergenic 25.0%
! TCTGTTATCTAATATATCAG+TGG + chr2_4:54941574-54941593 None:intergenic 25.0%
! AAACAGAAATACAAGAACAA+GGG - chr2_4:54941593-54941612 Msa0335780:CDS 25.0%
! TCTCATGTACTTAAATATCA+AGG - chr2_4:54941648-54941667 Msa0335780:intron 25.0%
!!! AATATCAAGGTTTTAGATTG+AGG - chr2_4:54941661-54941680 Msa0335780:intron 25.0%
!!! ATTTTTTTATGTTTTCGCGT+TGG + chr2_4:54941770-54941789 None:intergenic 25.0%
! ATGTGACGATTATGATTATT+TGG - chr2_4:54941970-54941989 Msa0335780:intron 25.0%
! GATATGATAGTACTATAAAG+AGG + chr2_4:54942022-54942041 None:intergenic 25.0%
! ATAAAGCTTTCTAATCATAC+AGG - chr2_4:54942042-54942061 Msa0335780:intron 25.0%
! TAAAGCTTTCTAATCATACA+GGG - chr2_4:54942043-54942062 Msa0335780:intron 25.0%
!! AATCATATCCATTGATTAGA+AGG + chr2_4:54942456-54942475 None:intergenic 25.0%
GACTCATTTCATTACTATGT+TGG + chr2_4:54941179-54941198 None:intergenic 30.0%
ATAGTAATGAAATGAGTCGT+GGG - chr2_4:54941181-54941200 Msa0335780:three_prime_UTR 30.0%
AAGCTTTACTTCACAAAGAA+TGG - chr2_4:54941288-54941307 Msa0335780:three_prime_UTR 30.0%
GTGATTGTTAAGTTCAAAGA+AGG - chr2_4:54941337-54941356 Msa0335780:three_prime_UTR 30.0%
ATCTTGTCAAATCCTTTGAA+TGG - chr2_4:54941413-54941432 Msa0335780:three_prime_UTR 30.0%
GTATAAGACATACCATTCAA+AGG + chr2_4:54941428-54941447 None:intergenic 30.0%
! TACCTTTTATATTGTGCAAG+AGG - chr2_4:54941451-54941470 Msa0335780:CDS 30.0%
GAAACAGAAATACAAGAACA+AGG - chr2_4:54941592-54941611 Msa0335780:CDS 30.0%
AAAGCTTTCTAATCATACAG+GGG - chr2_4:54942044-54942063 Msa0335780:intron 30.0%
ATTACTGAACTACGAACAAA+AGG + chr2_4:54942364-54942383 None:intergenic 30.0%
TCTGTACTGTGATATTTGTA+TGG - chr2_4:54942413-54942432 Msa0335780:exon 30.0%
GACTCATTTCATTACTATGT+TGG + chr2_4:54941179-54941198 None:intergenic 30.0%
ATAGTAATGAAATGAGTCGT+GGG - chr2_4:54941181-54941200 Msa0335780:three_prime_UTR 30.0%
AAGCTTTACTTCACAAAGAA+TGG - chr2_4:54941288-54941307 Msa0335780:three_prime_UTR 30.0%
GTGATTGTTAAGTTCAAAGA+AGG - chr2_4:54941337-54941356 Msa0335780:three_prime_UTR 30.0%
ATCTTGTCAAATCCTTTGAA+TGG - chr2_4:54941413-54941432 Msa0335780:three_prime_UTR 30.0%
GTATAAGACATACCATTCAA+AGG + chr2_4:54941428-54941447 None:intergenic 30.0%
! TACCTTTTATATTGTGCAAG+AGG - chr2_4:54941451-54941470 Msa0335780:CDS 30.0%
GAAACAGAAATACAAGAACA+AGG - chr2_4:54941592-54941611 Msa0335780:CDS 30.0%
AAAGCTTTCTAATCATACAG+GGG - chr2_4:54942044-54942063 Msa0335780:intron 30.0%
ATTACTGAACTACGAACAAA+AGG + chr2_4:54942364-54942383 None:intergenic 30.0%
TCTGTACTGTGATATTTGTA+TGG - chr2_4:54942413-54942432 Msa0335780:exon 30.0%
CATAGTAATGAAATGAGTCG+TGG - chr2_4:54941180-54941199 Msa0335780:three_prime_UTR 35.0%
TAGTAATGAAATGAGTCGTG+GGG - chr2_4:54941182-54941201 Msa0335780:three_prime_UTR 35.0%
ATTGACAGATCAAGACAGTA+AGG - chr2_4:54941213-54941232 Msa0335780:three_prime_UTR 35.0%
! AAGCACAATTTAGGGTTCAA+AGG + chr2_4:54941247-54941266 None:intergenic 35.0%
TTCACAAAGAATGGTAGTCA+TGG - chr2_4:54941297-54941316 Msa0335780:three_prime_UTR 35.0%
TAGTGGAAGAGCTTACAAAA+GGG - chr2_4:54941365-54941384 Msa0335780:three_prime_UTR 35.0%
TACAAAAGGGATGGAGAAAT+TGG - chr2_4:54941378-54941397 Msa0335780:three_prime_UTR 35.0%
AGCCTCTTGCACAATATAAA+AGG + chr2_4:54941456-54941475 None:intergenic 35.0%
TTGATTTCAGGCTTACATCA+CGG - chr2_4:54941790-54941809 Msa0335780:intron 35.0%
CTTGTTGAATGTCATCAAGA+AGG + chr2_4:54942117-54942136 None:intergenic 35.0%
CATAGTAATGAAATGAGTCG+TGG - chr2_4:54941180-54941199 Msa0335780:three_prime_UTR 35.0%
TAGTAATGAAATGAGTCGTG+GGG - chr2_4:54941182-54941201 Msa0335780:three_prime_UTR 35.0%
ATTGACAGATCAAGACAGTA+AGG - chr2_4:54941213-54941232 Msa0335780:three_prime_UTR 35.0%
! AAGCACAATTTAGGGTTCAA+AGG + chr2_4:54941247-54941266 None:intergenic 35.0%
TTCACAAAGAATGGTAGTCA+TGG - chr2_4:54941297-54941316 Msa0335780:three_prime_UTR 35.0%
TAGTGGAAGAGCTTACAAAA+GGG - chr2_4:54941365-54941384 Msa0335780:three_prime_UTR 35.0%
TACAAAAGGGATGGAGAAAT+TGG - chr2_4:54941378-54941397 Msa0335780:three_prime_UTR 35.0%
AGCCTCTTGCACAATATAAA+AGG + chr2_4:54941456-54941475 None:intergenic 35.0%
TTGATTTCAGGCTTACATCA+CGG - chr2_4:54941790-54941809 Msa0335780:intron 35.0%
CTTGTTGAATGTCATCAAGA+AGG + chr2_4:54942117-54942136 None:intergenic 35.0%
!! GTGAAGTAAAGCTTGCTACT+AGG + chr2_4:54941282-54941301 None:intergenic 40.0%
ACAAAGAATGGTAGTCATGG+AGG - chr2_4:54941300-54941319 Msa0335780:three_prime_UTR 40.0%
! GTTCAAAGAAGGTGTAGTAG+TGG - chr2_4:54941348-54941367 Msa0335780:three_prime_UTR 40.0%
! GTAGTGGAAGAGCTTACAAA+AGG - chr2_4:54941364-54941383 Msa0335780:three_prime_UTR 40.0%
AGTTAAATAGGCCTCGATTG+TGG - chr2_4:54941736-54941755 Msa0335780:intron 40.0%
!!! ATGTTTTCGCGTTGGTAATG+TGG + chr2_4:54941762-54941781 None:intergenic 40.0%
TTTCTAATCATACAGGGGAC+AGG - chr2_4:54942049-54942068 Msa0335780:intron 40.0%
AACCTTGTCTCAACACATCT+AGG + chr2_4:54942085-54942104 None:intergenic 40.0%
! AGAACTCAACATGACTTGGA+TGG + chr2_4:54942166-54942185 None:intergenic 40.0%
TCAGAGAACTCAACATGACT+TGG + chr2_4:54942170-54942189 None:intergenic 40.0%
!! TTCCTTAACTGGCTTGACAA+GGG + chr2_4:54942243-54942262 None:intergenic 40.0%
! GATTATGCTGCTTCCTTAAC+TGG + chr2_4:54942254-54942273 None:intergenic 40.0%
AGGGTTTGCCTTCTAATCAA+TGG - chr2_4:54942445-54942464 Msa0335780:five_prime_UTR 40.0%
!! GTGAAGTAAAGCTTGCTACT+AGG + chr2_4:54941282-54941301 None:intergenic 40.0%
ACAAAGAATGGTAGTCATGG+AGG - chr2_4:54941300-54941319 Msa0335780:three_prime_UTR 40.0%
! GTTCAAAGAAGGTGTAGTAG+TGG - chr2_4:54941348-54941367 Msa0335780:three_prime_UTR 40.0%
! GTAGTGGAAGAGCTTACAAA+AGG - chr2_4:54941364-54941383 Msa0335780:three_prime_UTR 40.0%
AGTTAAATAGGCCTCGATTG+TGG - chr2_4:54941736-54941755 Msa0335780:intron 40.0%
!!! ATGTTTTCGCGTTGGTAATG+TGG + chr2_4:54941762-54941781 None:intergenic 40.0%
TTTCTAATCATACAGGGGAC+AGG - chr2_4:54942049-54942068 Msa0335780:intron 40.0%
AACCTTGTCTCAACACATCT+AGG + chr2_4:54942085-54942104 None:intergenic 40.0%
! AGAACTCAACATGACTTGGA+TGG + chr2_4:54942166-54942185 None:intergenic 40.0%
TCAGAGAACTCAACATGACT+TGG + chr2_4:54942170-54942189 None:intergenic 40.0%
!! TTCCTTAACTGGCTTGACAA+GGG + chr2_4:54942243-54942262 None:intergenic 40.0%
! GATTATGCTGCTTCCTTAAC+TGG + chr2_4:54942254-54942273 None:intergenic 40.0%
AGGGTTTGCCTTCTAATCAA+TGG - chr2_4:54942445-54942464 Msa0335780:five_prime_UTR 40.0%
CGTTGACACATGTTGGACAT+TGG - chr2_4:54941108-54941127 Msa0335780:three_prime_UTR 45.0%
GGAAGAGCTTACAAAAGGGA+TGG - chr2_4:54941369-54941388 Msa0335780:three_prime_UTR 45.0%
AGCCTAGATGTGTTGAGACA+AGG - chr2_4:54942080-54942099 Msa0335780:intron 45.0%
AACCCTTGTCAAGCCAGTTA+AGG - chr2_4:54942238-54942257 Msa0335780:intron 45.0%
!! CTTCCTTAACTGGCTTGACA+AGG + chr2_4:54942244-54942263 None:intergenic 45.0%
CGTTGACACATGTTGGACAT+TGG - chr2_4:54941108-54941127 Msa0335780:three_prime_UTR 45.0%
GGAAGAGCTTACAAAAGGGA+TGG - chr2_4:54941369-54941388 Msa0335780:three_prime_UTR 45.0%
AGCCTAGATGTGTTGAGACA+AGG - chr2_4:54942080-54942099 Msa0335780:intron 45.0%
AACCCTTGTCAAGCCAGTTA+AGG - chr2_4:54942238-54942257 Msa0335780:intron 45.0%
!! CTTCCTTAACTGGCTTGACA+AGG + chr2_4:54942244-54942263 None:intergenic 45.0%
! TGGTAATGTGGCCACAATCG+AGG + chr2_4:54941750-54941769 None:intergenic 50.0%
!! ACTGGCTTGACAAGGGTTGA+GGG + chr2_4:54942236-54942255 None:intergenic 50.0%
!! AACTGGCTTGACAAGGGTTG+AGG + chr2_4:54942237-54942256 None:intergenic 50.0%
! TGGTAATGTGGCCACAATCG+AGG + chr2_4:54941750-54941769 None:intergenic 50.0%
!! ACTGGCTTGACAAGGGTTGA+GGG + chr2_4:54942236-54942255 None:intergenic 50.0%
!! AACTGGCTTGACAAGGGTTG+AGG + chr2_4:54942237-54942256 None:intergenic 50.0%
CGGTCGTAGACTCGTAGTTG+TGG - chr2_4:54941810-54941829 Msa0335780:intron 55.0%
! CTGGCTTGACAAGGGTTGAG+GGG + chr2_4:54942235-54942254 None:intergenic 55.0%
CGGTCGTAGACTCGTAGTTG+TGG - chr2_4:54941810-54941829 Msa0335780:intron 55.0%
! CTGGCTTGACAAGGGTTGAG+GGG + chr2_4:54942235-54942254 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 54941103 54942619 54941103 ID=Msa0335780;Name=Msa0335780
chr2_4 mRNA 54941103 54942619 54941103 ID=Msa0335780-mRNA-1;Parent=Msa0335780;Name=Msa0335780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=204|1|1|1|1|1|2|348|111
chr2_4 exon 54941103 54941658 54941103 ID=Msa0335780-mRNA-1:exon:16645;Parent=Msa0335780-mRNA-1
chr2_4 exon 54942288 54942619 54942288 ID=Msa0335780-mRNA-1:exon:16644;Parent=Msa0335780-mRNA-1
chr2_4 five_prime_UTR 54942416 54942619 54942416 ID=Msa0335780-mRNA-1:five_prime_utr;Parent=Msa0335780-mRNA-1
chr2_4 CDS 54942288 54942415 54942288 ID=Msa0335780-mRNA-1:cds;Parent=Msa0335780-mRNA-1
chr2_4 CDS 54941451 54941658 54941451 ID=Msa0335780-mRNA-1:cds;Parent=Msa0335780-mRNA-1
chr2_4 three_prime_UTR 54941103 54941450 54941103 ID=Msa0335780-mRNA-1:three_prime_utr;Parent=Msa0335780-mRNA-1
Gene Sequence

>Msa0335780

ATGGTAGTCATGGAGGAATTCAAGCACTTTGTGATTGTTAAGTTCAAAGAAGGTGTAGTAGTGGAAGAGCTTACAAAAGGGATGGAGAAATTGGTCTCAGAGATTGATCTTGTCAAATCCTTTGAATGGGGACAGGATATTGAAAGCCTAGATGTGTTGAGACAAGGTTTCACTCATGCCTTCTTGATGACATTCAACAAGAAAGAAGATTTTGCTGCATTTCAGAGCCATCCAAGTCATGTTGAGTTCTCTGAAAAGTTTTCAACAGCTATTGAAAAGATTGTGCTGCTTGATTTCCCCTCAACCCTTGTCAAGCCAGTTAAGGAAGCAGCATAA
Protein sequence

>Msa0335780

MVVMEEFKHFVIVKFKEGVVVEELTKGMEKLVSEIDLVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFAAFQSHPSHVEFSEKFSTAIEKIVLLDFPSTLVKPVKEAA*