Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0374030 | 0.813278 | 2.775055e-51 | -8.615850e-47 |
| Msa0014590 | Msa0374030 | 0.811823 | 5.774078e-51 | -8.615850e-47 |
| Msa0027860 | Msa0374030 | 0.801411 | 9.117715e-49 | -8.615850e-47 |
| Msa0190670 | Msa0374030 | 0.818521 | 1.877409e-52 | -8.615850e-47 |
| Msa0207640 | Msa0374030 | 0.824637 | 7.247135e-54 | -8.615850e-47 |
| Msa0366510 | Msa0374030 | 0.809962 | 1.459673e-50 | -8.615850e-47 |
| Msa0374030 | Msa0374040 | 0.844639 | 6.673570e-59 | -8.615850e-47 |
| Msa0374030 | Msa0396730 | 0.801224 | 9.959213e-49 | -8.615850e-47 |
| Msa0374030 | Msa0414480 | 0.834811 | 2.415654e-56 | -8.615850e-47 |
| Msa0374030 | Msa0469450 | 0.875702 | 2.501381e-68 | -8.615850e-47 |
| Msa0374030 | Msa0469460 | 0.884314 | 2.132503e-71 | -8.615850e-47 |
| Msa0374030 | Msa0469480 | 0.834658 | 2.639512e-56 | -8.615850e-47 |
| Msa0374030 | Msa0491830 | 0.823569 | 1.290679e-53 | -8.615850e-47 |
| Msa0374030 | Msa0515130 | 0.833061 | 6.618764e-56 | -8.615850e-47 |
| Msa0374030 | Msa0515150 | 0.803941 | 2.741537e-49 | -8.615850e-47 |
| Msa0374030 | Msa0535570 | 0.820341 | 7.218865e-53 | -8.615850e-47 |
| Msa0374030 | Msa0536770 | 0.803621 | 3.193843e-49 | -8.615850e-47 |
| Msa0374030 | Msa0539620 | 0.805953 | 1.040447e-49 | -8.615850e-47 |
| Msa0374030 | Msa0591490 | 0.835908 | 1.275949e-56 | -8.615850e-47 |
| Msa0374030 | Msa0594630 | 0.816967 | 4.208696e-52 | -8.615850e-47 |
| Msa0374030 | Msa0631700 | 0.811866 | 5.651723e-51 | -8.615850e-47 |
| Msa0374030 | Msa0632980 | 0.801456 | 8.929445e-49 | -8.615850e-47 |
| Msa0374030 | Msa0670360 | 0.810961 | 8.885811e-51 | -8.615850e-47 |
| Msa0374030 | Msa0671640 | 0.812766 | 3.593611e-51 | -8.615850e-47 |
| Msa0374030 | Msa0685080 | 0.806572 | 7.707883e-50 | -8.615850e-47 |
| Msa0374030 | Msa0708680 | 0.803589 | 3.242762e-49 | -8.615850e-47 |
| Msa0374030 | Msa0761950 | 0.802781 | 4.767737e-49 | -8.615850e-47 |
| Msa0374030 | Msa0896920 | 0.802795 | 4.735965e-49 | -8.615850e-47 |
| Msa0374030 | Msa1018590 | 0.813435 | 2.563355e-51 | -8.615850e-47 |
| Msa0374030 | Msa1022490 | 0.846161 | 2.583717e-59 | -8.615850e-47 |
| Msa0374030 | Msa1022510 | 0.851693 | 7.514015e-61 | -8.615850e-47 |
| Msa0374030 | Msa1024350 | 0.801847 | 7.423602e-49 | -8.615850e-47 |
| Msa0374030 | Msa1048350 | 0.804676 | 1.927248e-49 | -8.615850e-47 |
| Msa0374030 | Msa1048400 | 0.823638 | 1.243854e-53 | -8.615850e-47 |
| Msa0374030 | Msa1064940 | 0.805790 | 1.126291e-49 | -8.615850e-47 |
| Msa0374030 | Msa1106680 | 0.844923 | 5.595417e-59 | -8.615850e-47 |
| Msa0374030 | Msa1108560 | 0.806928 | 6.482176e-50 | -8.615850e-47 |
| Msa0374030 | Msa1147030 | 0.806421 | 8.295647e-50 | -8.615850e-47 |
| Msa0374030 | Msa1148210 | 0.805921 | 1.056707e-49 | -8.615850e-47 |
| Msa0374030 | Msa1170340 | 0.811118 | 8.213383e-51 | -8.615850e-47 |
| Msa0374030 | Msa1181090 | 0.815210 | 1.038798e-51 | -8.615850e-47 |
| Msa0374030 | Msa1231720 | 0.817899 | 2.596114e-52 | -8.615850e-47 |
| Msa0374030 | Msa1319030 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0374030 | Msa1319190 | 0.803431 | 3.497944e-49 | -8.615850e-47 |
| Msa0374030 | Msa1355340 | 0.809855 | 1.539294e-50 | -8.615850e-47 |
| Msa0374030 | Msa1411550 | 0.806342 | 8.620100e-50 | -8.615850e-47 |
| Msa0374030 | Msa1431160 | 0.814097 | 1.832603e-51 | -8.615850e-47 |
| Msa0272210 | Msa0374030 | 0.818224 | 2.191825e-52 | -8.615850e-47 |
| Msa0281190 | Msa0374030 | 0.813776 | 2.157279e-51 | -8.615850e-47 |
| Msa0328090 | Msa0374030 | 0.802773 | 4.783801e-49 | -8.615850e-47 |
| Msa0348370 | Msa0374030 | 0.802107 | 6.562298e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374030 | MtrunA17_Chr3g0124121 | 75.758 | 33 | 8 | 0 | 38 | 70 | 1 | 33 | 8.39e-11 | 52.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 3 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAATGACATCTTAGACTT+CGG | 0.475221 | 3_1:+73149857 | None:intergenic |
| ACGAAGTGTCTTTCAACTAC+TGG | 0.497425 | 3_1:-73150027 | Msa0374030:CDS |
| TAACACTGTCATCGTACTGT+TGG | 0.576545 | 3_1:-73149894 | Msa0374030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAATATATTTAATGTTT+TGG | - | chr3_1:73149939-73149958 | Msa0374030:CDS | 10.0% |
| !! | TATGTATAGATAAAAATTTA+AGG | + | chr3_1:73150628-73150647 | None:intergenic | 10.0% |
| !!! | AAAGAATATATTTAATGTTT+TGG | - | chr3_1:73149939-73149958 | Msa0374030:CDS | 10.0% |
| !! | TATGTATAGATAAAAATTTA+AGG | + | chr3_1:73150628-73150647 | None:intergenic | 10.0% |
| !!! | ATTATTCTAATGTTACTTTT+GGG | + | chr3_1:73150291-73150310 | None:intergenic | 15.0% |
| !! | AAATGATATTAACTTTATGA+TGG | + | chr3_1:73150521-73150540 | None:intergenic | 15.0% |
| !! | ATCTATACATAGTTTATATA+TGG | - | chr3_1:73150637-73150656 | Msa0374030:intron | 15.0% |
| !!! | ATTATTCTAATGTTACTTTT+GGG | + | chr3_1:73150291-73150310 | None:intergenic | 15.0% |
| !! | AAATGATATTAACTTTATGA+TGG | + | chr3_1:73150521-73150540 | None:intergenic | 15.0% |
| !! | ATCTATACATAGTTTATATA+TGG | - | chr3_1:73150637-73150656 | Msa0374030:intron | 15.0% |
| !!! | TTATTCTAATGTTACTTTTG+GGG | + | chr3_1:73150290-73150309 | None:intergenic | 20.0% |
| !!! | GATTATTCTAATGTTACTTT+TGG | + | chr3_1:73150292-73150311 | None:intergenic | 20.0% |
| !! | AAGTAACATTAGAATAATCA+AGG | - | chr3_1:73150293-73150312 | Msa0374030:intron | 20.0% |
| !!! | TTTAAGGCATTTAGTTTTTA+AGG | + | chr3_1:73150612-73150631 | None:intergenic | 20.0% |
| !! | ATAATTGTGCAATTTATTGA+AGG | - | chr3_1:73150967-73150986 | Msa0374030:intron | 20.0% |
| !!! | TTATTCTAATGTTACTTTTG+GGG | + | chr3_1:73150290-73150309 | None:intergenic | 20.0% |
| !!! | GATTATTCTAATGTTACTTT+TGG | + | chr3_1:73150292-73150311 | None:intergenic | 20.0% |
| !! | AAGTAACATTAGAATAATCA+AGG | - | chr3_1:73150293-73150312 | Msa0374030:intron | 20.0% |
| !!! | TTTAAGGCATTTAGTTTTTA+AGG | + | chr3_1:73150612-73150631 | None:intergenic | 20.0% |
| !! | ATAATTGTGCAATTTATTGA+AGG | - | chr3_1:73150967-73150986 | Msa0374030:intron | 20.0% |
| !! | TTGTTATTCTGATATGGTAT+TGG | - | chr3_1:73150222-73150241 | Msa0374030:intron | 25.0% |
| ! | TGTTATTCTGATATGGTATT+GGG | - | chr3_1:73150223-73150242 | Msa0374030:intron | 25.0% |
| ! | ATATTTGTAAGCTTAATGAG+TGG | + | chr3_1:73150470-73150489 | None:intergenic | 25.0% |
| !!! | CCTCAATATTGTTTTAGATA+AGG | + | chr3_1:73150561-73150580 | None:intergenic | 25.0% |
| !! | CCTTATCTAAAACAATATTG+AGG | - | chr3_1:73150558-73150577 | Msa0374030:intron | 25.0% |
| !! | TTGTTATTCTGATATGGTAT+TGG | - | chr3_1:73150222-73150241 | Msa0374030:intron | 25.0% |
| ! | TGTTATTCTGATATGGTATT+GGG | - | chr3_1:73150223-73150242 | Msa0374030:intron | 25.0% |
| ! | ATATTTGTAAGCTTAATGAG+TGG | + | chr3_1:73150470-73150489 | None:intergenic | 25.0% |
| !!! | CCTCAATATTGTTTTAGATA+AGG | + | chr3_1:73150561-73150580 | None:intergenic | 25.0% |
| !! | CCTTATCTAAAACAATATTG+AGG | - | chr3_1:73150558-73150577 | Msa0374030:intron | 25.0% |
| ! | CTCTTATTCTCCATTTTCAA+TGG | + | chr3_1:73149868-73149887 | None:intergenic | 30.0% |
| ATGTGATGCATTATATAGTG+TGG | - | chr3_1:73149981-73150000 | Msa0374030:CDS | 30.0% | |
| TGCATTATATAGTGTGGAAA+AGG | - | chr3_1:73149987-73150006 | Msa0374030:CDS | 30.0% | |
| ATAGTGTGGAAAAGGTAAAT+TGG | - | chr3_1:73149995-73150014 | Msa0374030:CDS | 30.0% | |
| ! | AAAAAGCACAACTGAGATAT+TGG | + | chr3_1:73150085-73150104 | None:intergenic | 30.0% |
| ! | TGCATGGTTTAAGATTAAGA+TGG | + | chr3_1:73150123-73150142 | None:intergenic | 30.0% |
| !! | AAAACCTTTAGAATCTCGAA+AGG | - | chr3_1:73150178-73150197 | Msa0374030:intron | 30.0% |
| ! | AAAGGCTAGATTTTCCAATT+TGG | - | chr3_1:73150196-73150215 | Msa0374030:intron | 30.0% |
| TCTTAATGCAATCCATAACT+TGG | - | chr3_1:73150262-73150281 | Msa0374030:intron | 30.0% | |
| CTTAATGCAATCCATAACTT+GGG | - | chr3_1:73150263-73150282 | Msa0374030:intron | 30.0% | |
| TGACTAAAATTCTTGAATGC+TGG | - | chr3_1:73150325-73150344 | Msa0374030:intron | 30.0% | |
| TAGATAAGAATTCCAACTGA+GGG | + | chr3_1:73150382-73150401 | None:intergenic | 30.0% | |
| TTAGATAAGAATTCCAACTG+AGG | + | chr3_1:73150383-73150402 | None:intergenic | 30.0% | |
| ATAGTTTATATATGGCTGTC+AGG | - | chr3_1:73150645-73150664 | Msa0374030:intron | 30.0% | |
| TCAATTCACTCTAAGCTAAA+GGG | + | chr3_1:73150845-73150864 | None:intergenic | 30.0% | |
| TTCAATTCACTCTAAGCTAA+AGG | + | chr3_1:73150846-73150865 | None:intergenic | 30.0% | |
| ! | TTTAGCTTAGAGTGAATTGA+AGG | - | chr3_1:73150845-73150864 | Msa0374030:intron | 30.0% |
| TTAGAGTGAATTGAAGGAAT+GGG | - | chr3_1:73150851-73150870 | Msa0374030:intron | 30.0% | |
| TAGAATGACATCTTAGACTT+CGG | + | chr3_1:73151176-73151195 | None:intergenic | 30.0% | |
| ! | CTCTTATTCTCCATTTTCAA+TGG | + | chr3_1:73149868-73149887 | None:intergenic | 30.0% |
| ATGTGATGCATTATATAGTG+TGG | - | chr3_1:73149981-73150000 | Msa0374030:CDS | 30.0% | |
| TGCATTATATAGTGTGGAAA+AGG | - | chr3_1:73149987-73150006 | Msa0374030:CDS | 30.0% | |
| ATAGTGTGGAAAAGGTAAAT+TGG | - | chr3_1:73149995-73150014 | Msa0374030:CDS | 30.0% | |
| ! | AAAAAGCACAACTGAGATAT+TGG | + | chr3_1:73150085-73150104 | None:intergenic | 30.0% |
| ! | TGCATGGTTTAAGATTAAGA+TGG | + | chr3_1:73150123-73150142 | None:intergenic | 30.0% |
| !! | AAAACCTTTAGAATCTCGAA+AGG | - | chr3_1:73150178-73150197 | Msa0374030:intron | 30.0% |
| ! | AAAGGCTAGATTTTCCAATT+TGG | - | chr3_1:73150196-73150215 | Msa0374030:intron | 30.0% |
| TCTTAATGCAATCCATAACT+TGG | - | chr3_1:73150262-73150281 | Msa0374030:intron | 30.0% | |
| CTTAATGCAATCCATAACTT+GGG | - | chr3_1:73150263-73150282 | Msa0374030:intron | 30.0% | |
| TGACTAAAATTCTTGAATGC+TGG | - | chr3_1:73150325-73150344 | Msa0374030:intron | 30.0% | |
| TAGATAAGAATTCCAACTGA+GGG | + | chr3_1:73150382-73150401 | None:intergenic | 30.0% | |
| TTAGATAAGAATTCCAACTG+AGG | + | chr3_1:73150383-73150402 | None:intergenic | 30.0% | |
| ATAGTTTATATATGGCTGTC+AGG | - | chr3_1:73150645-73150664 | Msa0374030:intron | 30.0% | |
| TCAATTCACTCTAAGCTAAA+GGG | + | chr3_1:73150845-73150864 | None:intergenic | 30.0% | |
| TTCAATTCACTCTAAGCTAA+AGG | + | chr3_1:73150846-73150865 | None:intergenic | 30.0% | |
| ! | TTTAGCTTAGAGTGAATTGA+AGG | - | chr3_1:73150845-73150864 | Msa0374030:intron | 30.0% |
| TTAGAGTGAATTGAAGGAAT+GGG | - | chr3_1:73150851-73150870 | Msa0374030:intron | 30.0% | |
| TAGAATGACATCTTAGACTT+CGG | + | chr3_1:73151176-73151195 | None:intergenic | 30.0% | |
| TTCGATGGATCCATTGAAAA+TGG | - | chr3_1:73149855-73149874 | Msa0374030:CDS | 35.0% | |
| GTAAATTGGAAATGCTTTCC+AGG | - | chr3_1:73150009-73150028 | Msa0374030:CDS | 35.0% | |
| ATACACTATGTTAGTGCTCA+AGG | + | chr3_1:73150048-73150067 | None:intergenic | 35.0% | |
| CAGAATAACAAGAGCCAAAT+TGG | + | chr3_1:73150213-73150232 | None:intergenic | 35.0% | |
| !! | TGGCTCTTGTTATTCTGATA+TGG | - | chr3_1:73150216-73150235 | Msa0374030:intron | 35.0% |
| TGGATTGCATTAAGATACTG+TGG | + | chr3_1:73150257-73150276 | None:intergenic | 35.0% | |
| ! | TTATTGATGGCTGTCAATTG+AGG | + | chr3_1:73150351-73150370 | None:intergenic | 35.0% |
| TCAATTGACAGCCATCAATA+AGG | - | chr3_1:73150350-73150369 | Msa0374030:intron | 35.0% | |
| TTGTAAGCTTAATGAGTGGT+AGG | + | chr3_1:73150466-73150485 | None:intergenic | 35.0% | |
| ! | CAATATTGAGGAGCGAATTT+TGG | - | chr3_1:73150570-73150589 | Msa0374030:intron | 35.0% |
| CTTAGAGTGAATTGAAGGAA+TGG | - | chr3_1:73150850-73150869 | Msa0374030:intron | 35.0% | |
| TTCGATGGATCCATTGAAAA+TGG | - | chr3_1:73149855-73149874 | Msa0374030:CDS | 35.0% | |
| GTAAATTGGAAATGCTTTCC+AGG | - | chr3_1:73150009-73150028 | Msa0374030:CDS | 35.0% | |
| ATACACTATGTTAGTGCTCA+AGG | + | chr3_1:73150048-73150067 | None:intergenic | 35.0% | |
| CAGAATAACAAGAGCCAAAT+TGG | + | chr3_1:73150213-73150232 | None:intergenic | 35.0% | |
| !! | TGGCTCTTGTTATTCTGATA+TGG | - | chr3_1:73150216-73150235 | Msa0374030:intron | 35.0% |
| TGGATTGCATTAAGATACTG+TGG | + | chr3_1:73150257-73150276 | None:intergenic | 35.0% | |
| ! | TTATTGATGGCTGTCAATTG+AGG | + | chr3_1:73150351-73150370 | None:intergenic | 35.0% |
| TCAATTGACAGCCATCAATA+AGG | - | chr3_1:73150350-73150369 | Msa0374030:intron | 35.0% | |
| TTGTAAGCTTAATGAGTGGT+AGG | + | chr3_1:73150466-73150485 | None:intergenic | 35.0% | |
| ! | CAATATTGAGGAGCGAATTT+TGG | - | chr3_1:73150570-73150589 | Msa0374030:intron | 35.0% |
| CTTAGAGTGAATTGAAGGAA+TGG | - | chr3_1:73150850-73150869 | Msa0374030:intron | 35.0% | |
| TTGTAGCTCGAAATAGAGAG+AGG | - | chr3_1:73149905-73149924 | Msa0374030:CDS | 40.0% | |
| TCAACACAATCTCATGTGCA+TGG | + | chr3_1:73150139-73150158 | None:intergenic | 40.0% | |
| ! | CTAGCCTTTCGAGATTCTAA+AGG | + | chr3_1:73150185-73150204 | None:intergenic | 40.0% |
| GTTTATATATGGCTGTCAGG+TGG | - | chr3_1:73150648-73150667 | Msa0374030:intron | 40.0% | |
| TCAGTCTCTCCAATTCTTAC+TGG | + | chr3_1:73150737-73150756 | None:intergenic | 40.0% | |
| AGCAGTGCATACCTTTCTAT+TGG | - | chr3_1:73150768-73150787 | Msa0374030:intron | 40.0% | |
| GCAGTGCATACCTTTCTATT+GGG | - | chr3_1:73150769-73150788 | Msa0374030:intron | 40.0% | |
| CAGTGCATACCTTTCTATTG+GGG | - | chr3_1:73150770-73150789 | Msa0374030:intron | 40.0% | |
| GCGAAGTTTGGATTGATCAT+TGG | - | chr3_1:73150885-73150904 | Msa0374030:intron | 40.0% | |
| !! | TAAACAACATTGCCGACTTG+GGG | + | chr3_1:73150930-73150949 | None:intergenic | 40.0% |
| !! | CTAAACAACATTGCCGACTT+GGG | + | chr3_1:73150931-73150950 | None:intergenic | 40.0% |
| ! | TCTAAACAACATTGCCGACT+TGG | + | chr3_1:73150932-73150951 | None:intergenic | 40.0% |
| ! | ACGAAGTGTCTTTCAACTAC+TGG | - | chr3_1:73151003-73151022 | Msa0374030:intron | 40.0% |
| TAACACTGTCATCGTACTGT+TGG | - | chr3_1:73151136-73151155 | Msa0374030:intron | 40.0% | |
| TTGTAGCTCGAAATAGAGAG+AGG | - | chr3_1:73149905-73149924 | Msa0374030:CDS | 40.0% | |
| TCAACACAATCTCATGTGCA+TGG | + | chr3_1:73150139-73150158 | None:intergenic | 40.0% | |
| ! | CTAGCCTTTCGAGATTCTAA+AGG | + | chr3_1:73150185-73150204 | None:intergenic | 40.0% |
| GTTTATATATGGCTGTCAGG+TGG | - | chr3_1:73150648-73150667 | Msa0374030:intron | 40.0% | |
| TCAGTCTCTCCAATTCTTAC+TGG | + | chr3_1:73150737-73150756 | None:intergenic | 40.0% | |
| AGCAGTGCATACCTTTCTAT+TGG | - | chr3_1:73150768-73150787 | Msa0374030:intron | 40.0% | |
| GCAGTGCATACCTTTCTATT+GGG | - | chr3_1:73150769-73150788 | Msa0374030:intron | 40.0% | |
| CAGTGCATACCTTTCTATTG+GGG | - | chr3_1:73150770-73150789 | Msa0374030:intron | 40.0% | |
| GCGAAGTTTGGATTGATCAT+TGG | - | chr3_1:73150885-73150904 | Msa0374030:intron | 40.0% | |
| !! | TAAACAACATTGCCGACTTG+GGG | + | chr3_1:73150930-73150949 | None:intergenic | 40.0% |
| !! | CTAAACAACATTGCCGACTT+GGG | + | chr3_1:73150931-73150950 | None:intergenic | 40.0% |
| ! | TCTAAACAACATTGCCGACT+TGG | + | chr3_1:73150932-73150951 | None:intergenic | 40.0% |
| ! | ACGAAGTGTCTTTCAACTAC+TGG | - | chr3_1:73151003-73151022 | Msa0374030:intron | 40.0% |
| TAACACTGTCATCGTACTGT+TGG | - | chr3_1:73151136-73151155 | Msa0374030:intron | 40.0% | |
| !!! | ACTTTTGGGGTCCCAAGTTA+TGG | + | chr3_1:73150277-73150296 | None:intergenic | 45.0% |
| !! | GAGGGTTCTAGCCTTATTGA+TGG | + | chr3_1:73150364-73150383 | None:intergenic | 45.0% |
| ATAAGGCTAGAACCCTCAGT+TGG | - | chr3_1:73150367-73150386 | Msa0374030:intron | 45.0% | |
| ! | TTGAGCACTGTAATGCTTGC+AGG | + | chr3_1:73150713-73150732 | None:intergenic | 45.0% |
| GTGCTCAAGCCAGTAAGAAT+TGG | - | chr3_1:73150725-73150744 | Msa0374030:intron | 45.0% | |
| GCATACCTTTCTATTGGGGT+TGG | - | chr3_1:73150774-73150793 | Msa0374030:intron | 45.0% | |
| GAGATCCAACCCCAATAGAA+AGG | + | chr3_1:73150782-73150801 | None:intergenic | 45.0% | |
| GAAGGAATGGGTCTTCATGA+AGG | - | chr3_1:73150863-73150882 | Msa0374030:intron | 45.0% | |
| GTCTTCATGAAGGCGAAGTT+TGG | - | chr3_1:73150873-73150892 | Msa0374030:intron | 45.0% | |
| !! | AAACAACATTGCCGACTTGG+GGG | + | chr3_1:73150929-73150948 | None:intergenic | 45.0% |
| !!! | ACTTTTGGGGTCCCAAGTTA+TGG | + | chr3_1:73150277-73150296 | None:intergenic | 45.0% |
| !! | GAGGGTTCTAGCCTTATTGA+TGG | + | chr3_1:73150364-73150383 | None:intergenic | 45.0% |
| ATAAGGCTAGAACCCTCAGT+TGG | - | chr3_1:73150367-73150386 | Msa0374030:intron | 45.0% | |
| ! | TTGAGCACTGTAATGCTTGC+AGG | + | chr3_1:73150713-73150732 | None:intergenic | 45.0% |
| GTGCTCAAGCCAGTAAGAAT+TGG | - | chr3_1:73150725-73150744 | Msa0374030:intron | 45.0% | |
| GCATACCTTTCTATTGGGGT+TGG | - | chr3_1:73150774-73150793 | Msa0374030:intron | 45.0% | |
| GAGATCCAACCCCAATAGAA+AGG | + | chr3_1:73150782-73150801 | None:intergenic | 45.0% | |
| GAAGGAATGGGTCTTCATGA+AGG | - | chr3_1:73150863-73150882 | Msa0374030:intron | 45.0% | |
| GTCTTCATGAAGGCGAAGTT+TGG | - | chr3_1:73150873-73150892 | Msa0374030:intron | 45.0% | |
| !! | AAACAACATTGCCGACTTGG+GGG | + | chr3_1:73150929-73150948 | None:intergenic | 45.0% |
| CAAGGATAAGAGCAGCTTCC+TGG | + | chr3_1:73150030-73150049 | None:intergenic | 50.0% | |
| AACTGACTGGAGACACTCTC+CGG | - | chr3_1:73150671-73150690 | Msa0374030:intron | 50.0% | |
| ACACTCTCCGGTGAAGCAAA+GGG | - | chr3_1:73150683-73150702 | Msa0374030:intron | 50.0% | |
| AGGTACTCCCTTTGCTTCAC+CGG | + | chr3_1:73150693-73150712 | None:intergenic | 50.0% | |
| CAAAACAGTTGCCCCCAAGT+CGG | - | chr3_1:73150915-73150934 | Msa0374030:intron | 50.0% | |
| CAAGGATAAGAGCAGCTTCC+TGG | + | chr3_1:73150030-73150049 | None:intergenic | 50.0% | |
| AACTGACTGGAGACACTCTC+CGG | - | chr3_1:73150671-73150690 | Msa0374030:intron | 50.0% | |
| ACACTCTCCGGTGAAGCAAA+GGG | - | chr3_1:73150683-73150702 | Msa0374030:intron | 50.0% | |
| AGGTACTCCCTTTGCTTCAC+CGG | + | chr3_1:73150693-73150712 | None:intergenic | 50.0% | |
| CAAAACAGTTGCCCCCAAGT+CGG | - | chr3_1:73150915-73150934 | Msa0374030:intron | 50.0% | |
| GACACTCTCCGGTGAAGCAA+AGG | - | chr3_1:73150682-73150701 | Msa0374030:intron | 55.0% | |
| !! | GGGGGCAACTGTTTTGGACT+AGG | + | chr3_1:73150911-73150930 | None:intergenic | 55.0% |
| !! | CGACTTGGGGGCAACTGTTT+TGG | + | chr3_1:73150917-73150936 | None:intergenic | 55.0% |
| GACACTCTCCGGTGAAGCAA+AGG | - | chr3_1:73150682-73150701 | Msa0374030:intron | 55.0% | |
| !! | GGGGGCAACTGTTTTGGACT+AGG | + | chr3_1:73150911-73150930 | None:intergenic | 55.0% |
| !! | CGACTTGGGGGCAACTGTTT+TGG | + | chr3_1:73150917-73150936 | None:intergenic | 55.0% |
| GGCTGTCAGGTGGAACTGAC+TGG | - | chr3_1:73150658-73150677 | Msa0374030:intron | 60.0% | |
| GGCTGTCAGGTGGAACTGAC+TGG | - | chr3_1:73150658-73150677 | Msa0374030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73149844 | 73151208 | 73149844 | ID=Msa0374030;Name=Msa0374030 |
| chr3_1 | mRNA | 73149844 | 73151208 | 73149844 | ID=Msa0374030-mRNA-1;Parent=Msa0374030;Name=Msa0374030-mRNA-1;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.5|1|1|2|0|70 |
| chr3_1 | exon | 73151203 | 73151208 | 73151203 | ID=Msa0374030-mRNA-1:exon:16629;Parent=Msa0374030-mRNA-1 |
| chr3_1 | exon | 73149844 | 73150050 | 73149844 | ID=Msa0374030-mRNA-1:exon:16628;Parent=Msa0374030-mRNA-1 |
| chr3_1 | CDS | 73151203 | 73151208 | 73151203 | ID=Msa0374030-mRNA-1:cds;Parent=Msa0374030-mRNA-1 |
| chr3_1 | CDS | 73149844 | 73150050 | 73149844 | ID=Msa0374030-mRNA-1:cds;Parent=Msa0374030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
