Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469450 | XP_003601958.1 | 93.467 | 199 | 13 | 0 | 1 | 199 | 1 | 199 | 2.67e-136 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469450 | G7J3S4 | 93.467 | 199 | 13 | 0 | 1 | 199 | 1 | 199 | 1.28e-136 | 389 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0469450 | 0.879400 | 1.285554e-69 | -8.615850e-47 |
| Msa0014590 | Msa0469450 | 0.853315 | 2.591023e-61 | -8.615850e-47 |
| Msa0027860 | Msa0469450 | 0.853594 | 2.155603e-61 | -8.615850e-47 |
| Msa0046390 | Msa0469450 | 0.818833 | 1.594979e-52 | -8.615850e-47 |
| Msa0059880 | Msa0469450 | 0.848700 | 5.185478e-60 | -8.615850e-47 |
| Msa0063540 | Msa0469450 | 0.816906 | 4.342951e-52 | -8.615850e-47 |
| Msa0074620 | Msa0469450 | 0.827467 | 1.539685e-54 | -8.615850e-47 |
| Msa0075560 | Msa0469450 | 0.835152 | 1.981283e-56 | -8.615850e-47 |
| Msa0085110 | Msa0469450 | 0.810035 | 1.407782e-50 | -8.615850e-47 |
| Msa0087900 | Msa0469450 | 0.802631 | 5.119474e-49 | -8.615850e-47 |
| Msa0095910 | Msa0469450 | 0.813713 | 2.226736e-51 | -8.615850e-47 |
| Msa0108350 | Msa0469450 | 0.818043 | 2.407689e-52 | -8.615850e-47 |
| Msa0123530 | Msa0469450 | 0.837617 | 4.677028e-57 | -8.615850e-47 |
| Msa0134570 | Msa0469450 | 0.803371 | 3.599135e-49 | -8.615850e-47 |
| Msa0150910 | Msa0469450 | 0.851393 | 9.141257e-61 | -8.615850e-47 |
| Msa0150920 | Msa0469450 | 0.834642 | 2.663347e-56 | -8.615850e-47 |
| Msa0154460 | Msa0469450 | 0.803513 | 3.363291e-49 | -8.615850e-47 |
| Msa0163340 | Msa0469450 | 0.816108 | 6.554116e-52 | -8.615850e-47 |
| Msa0168010 | Msa0469450 | 0.840684 | 7.498571e-58 | -8.615850e-47 |
| Msa0170990 | Msa0469450 | 0.820718 | 5.914492e-53 | -8.615850e-47 |
| Msa0177550 | Msa0469450 | 0.825878 | 3.687026e-54 | -8.615850e-47 |
| Msa0190670 | Msa0469450 | 0.864498 | 1.164221e-64 | -8.615850e-47 |
| Msa0190890 | Msa0469450 | 0.807187 | 5.711990e-50 | -8.615850e-47 |
| Msa0194230 | Msa0469450 | 0.835635 | 1.495686e-56 | -8.615850e-47 |
| Msa0195580 | Msa0469450 | 0.809885 | 1.516575e-50 | -8.615850e-47 |
| Msa0197020 | Msa0469450 | 0.830122 | 3.508691e-55 | -8.615850e-47 |
| Msa0207640 | Msa0469450 | 0.878760 | 2.164286e-69 | -8.615850e-47 |
| Msa0209060 | Msa0469450 | 0.800874 | 1.174304e-48 | -8.615850e-47 |
| Msa0209520 | Msa0469450 | 0.809791 | 1.589096e-50 | -8.615850e-47 |
| Msa0212550 | Msa0469450 | 0.836019 | 1.195602e-56 | -8.615850e-47 |
| Msa0225920 | Msa0469450 | 0.806849 | 6.734772e-50 | -8.615850e-47 |
| Msa0233210 | Msa0469450 | 0.808202 | 3.476892e-50 | -8.615850e-47 |
| Msa0234120 | Msa0469450 | 0.806746 | 7.080799e-50 | -8.615850e-47 |
| Msa0234130 | Msa0469450 | 0.806042 | 9.967985e-50 | -8.615850e-47 |
| Msa0366510 | Msa0469450 | 0.834345 | 3.162173e-56 | -8.615850e-47 |
| Msa0370620 | Msa0469450 | 0.801416 | 9.097711e-49 | -8.615850e-47 |
| Msa0374030 | Msa0469450 | 0.875702 | 2.501381e-68 | -8.615850e-47 |
| Msa0374040 | Msa0469450 | 0.889482 | 2.329526e-73 | -8.615850e-47 |
| Msa0396700 | Msa0469450 | 0.843904 | 1.051574e-58 | -8.615850e-47 |
| Msa0396730 | Msa0469450 | 0.825764 | 3.923937e-54 | -8.615850e-47 |
| Msa0396790 | Msa0469450 | 0.838941 | 2.131993e-57 | -8.615850e-47 |
| Msa0396860 | Msa0469450 | 0.819220 | 1.301919e-52 | -8.615850e-47 |
| Msa0410560 | Msa0469450 | 0.801430 | 9.039245e-49 | -8.615850e-47 |
| Msa0414480 | Msa0469450 | 0.849506 | 3.096314e-60 | -8.615850e-47 |
| Msa0418160 | Msa0469450 | 0.810974 | 8.827360e-51 | -8.615850e-47 |
| Msa0420890 | Msa0469450 | 0.802351 | 5.846134e-49 | -8.615850e-47 |
| Msa0423200 | Msa0469450 | 0.827581 | 1.445781e-54 | -8.615850e-47 |
| Msa0423220 | Msa0469450 | 0.839719 | 1.339120e-57 | -8.615850e-47 |
| Msa0444210 | Msa0469450 | 0.815977 | 7.010196e-52 | -8.615850e-47 |
| Msa0444250 | Msa0469450 | 0.833962 | 3.944271e-56 | -8.615850e-47 |
| Msa0444400 | Msa0469450 | 0.842685 | 2.224177e-58 | -8.615850e-47 |
| Msa0464310 | Msa0469450 | 0.839705 | 1.350542e-57 | -8.615850e-47 |
| Msa0469450 | Msa0469460 | 0.909343 | 6.327919e-82 | -8.615850e-47 |
| Msa0469450 | Msa0469480 | 0.834829 | 2.390590e-56 | -8.615850e-47 |
| Msa0469450 | Msa0489370 | 0.802459 | 5.554665e-49 | -8.615850e-47 |
| Msa0469450 | Msa0490060 | 0.843055 | 1.773097e-58 | -8.615850e-47 |
| Msa0469450 | Msa0491770 | 0.831810 | 1.351925e-55 | -8.615850e-47 |
| Msa0469450 | Msa0491780 | 0.838020 | 3.684734e-57 | -8.615850e-47 |
| Msa0469450 | Msa0491800 | 0.846573 | 1.995016e-59 | -8.615850e-47 |
| Msa0469450 | Msa0491830 | 0.845708 | 3.430245e-59 | -8.615850e-47 |
| Msa0469450 | Msa0491950 | 0.833359 | 5.580803e-56 | -8.615850e-47 |
| Msa0469450 | Msa0496070 | 0.803753 | 2.998412e-49 | -8.615850e-47 |
| Msa0469450 | Msa0507600 | 0.830143 | 3.466458e-55 | -8.615850e-47 |
| Msa0469450 | Msa0515130 | 0.897445 | 1.396615e-76 | -8.615850e-47 |
| Msa0469450 | Msa0515150 | 0.869738 | 2.472607e-66 | -8.615850e-47 |
| Msa0469450 | Msa0530990 | 0.800910 | 1.154484e-48 | -8.615850e-47 |
| Msa0469450 | Msa0535570 | 0.886861 | 2.365642e-72 | -8.615850e-47 |
| Msa0469450 | Msa0538440 | 0.845659 | 3.538262e-59 | -8.615850e-47 |
| Msa0469450 | Msa0538450 | 0.849661 | 2.801454e-60 | -8.615850e-47 |
| Msa0469450 | Msa0538520 | 0.845708 | 3.431611e-59 | -8.615850e-47 |
| Msa0469450 | Msa0538530 | 0.844497 | 7.286593e-59 | -8.615850e-47 |
| Msa0469450 | Msa0543740 | 0.827186 | 1.797879e-54 | -8.615850e-47 |
| Msa0469450 | Msa0549170 | 0.805510 | 1.289312e-49 | -8.615850e-47 |
| Msa0469450 | Msa0554660 | 0.849592 | 2.928341e-60 | -8.615850e-47 |
| Msa0469450 | Msa0555920 | 0.822927 | 1.822539e-53 | -8.615850e-47 |
| Msa0469450 | Msa0557230 | 0.803528 | 3.339467e-49 | -8.615850e-47 |
| Msa0469450 | Msa0569100 | 0.804144 | 2.487761e-49 | -8.615850e-47 |
| Msa0469450 | Msa0587730 | 0.801720 | 7.881838e-49 | -8.615850e-47 |
| Msa0469450 | Msa0591490 | 0.885254 | 9.523038e-72 | -8.615850e-47 |
| Msa0469450 | Msa0593870 | 0.805724 | 1.162403e-49 | -8.615850e-47 |
| Msa0469450 | Msa0594320 | 0.817198 | 3.733706e-52 | -8.615850e-47 |
| Msa0469450 | Msa0594330 | 0.823886 | 1.087724e-53 | -8.615850e-47 |
| Msa0469450 | Msa0597170 | 0.803091 | 4.113083e-49 | -8.615850e-47 |
| Msa0469450 | Msa0604200 | 0.821031 | 5.010915e-53 | -8.615850e-47 |
| Msa0469450 | Msa0604280 | 0.821428 | 4.058095e-53 | -8.615850e-47 |
| Msa0469450 | Msa0609460 | 0.832383 | 9.752730e-56 | -8.615850e-47 |
| Msa0469450 | Msa0614960 | 0.805385 | 1.369184e-49 | -8.615850e-47 |
| Msa0469450 | Msa0631700 | 0.878618 | 2.426603e-69 | -8.615850e-47 |
| Msa0469450 | Msa0634290 | 0.837614 | 4.686271e-57 | -8.615850e-47 |
| Msa0469450 | Msa0639410 | 0.819509 | 1.118822e-52 | -8.615850e-47 |
| Msa0469450 | Msa0643840 | 0.819940 | 8.920865e-53 | -8.615850e-47 |
| Msa0469450 | Msa0650100 | 0.825811 | 3.824659e-54 | -8.615850e-47 |
| Msa0469450 | Msa0651820 | 0.811268 | 7.621251e-51 | -8.615850e-47 |
| Msa0469450 | Msa0652580 | 0.800433 | 1.444257e-48 | -8.615850e-47 |
| Msa0469450 | Msa0665830 | 0.803248 | 3.817085e-49 | -8.615850e-47 |
| Msa0469450 | Msa0670360 | 0.885092 | 1.094875e-71 | -8.615850e-47 |
| Msa0469450 | Msa0671640 | 0.839006 | 2.050580e-57 | -8.615850e-47 |
| Msa0469450 | Msa0675620 | 0.801101 | 1.055410e-48 | -8.615850e-47 |
| Msa0469450 | Msa0685080 | 0.842393 | 2.657619e-58 | -8.615850e-47 |
| Msa0469450 | Msa0692090 | 0.817272 | 3.593265e-52 | -8.615850e-47 |
| Msa0469450 | Msa0699170 | 0.808410 | 3.139448e-50 | -8.615850e-47 |
| Msa0469450 | Msa0708680 | 0.810081 | 1.376551e-50 | -8.615850e-47 |
| Msa0469450 | Msa0711240 | 0.824898 | 6.287229e-54 | -8.615850e-47 |
| Msa0469450 | Msa0711250 | 0.805187 | 1.507052e-49 | -8.615850e-47 |
| Msa0469450 | Msa0711260 | 0.804614 | 1.984982e-49 | -8.615850e-47 |
| Msa0469450 | Msa0715250 | 0.815784 | 7.740751e-52 | -8.615850e-47 |
| Msa0469450 | Msa0716620 | 0.805506 | 1.291771e-49 | -8.615850e-47 |
| Msa0469450 | Msa0716630 | 0.805646 | 1.207528e-49 | -8.615850e-47 |
| Msa0469450 | Msa0720870 | 0.820843 | 5.536704e-53 | -8.615850e-47 |
| Msa0469450 | Msa0727480 | 0.826446 | 2.700818e-54 | -8.615850e-47 |
| Msa0469450 | Msa0735140 | 0.810588 | 1.070012e-50 | -8.615850e-47 |
| Msa0469450 | Msa0751960 | 0.846568 | 2.001189e-59 | -8.615850e-47 |
| Msa0469450 | Msa0757120 | 0.801386 | 9.226756e-49 | -8.615850e-47 |
| Msa0469450 | Msa0757220 | 0.825447 | 4.665685e-54 | -8.615850e-47 |
| Msa0469450 | Msa0761420 | 0.825280 | 5.109134e-54 | -8.615850e-47 |
| Msa0469450 | Msa0761950 | 0.803347 | 3.640388e-49 | -8.615850e-47 |
| Msa0469450 | Msa0768670 | 0.824796 | 6.647277e-54 | -8.615850e-47 |
| Msa0469450 | Msa0768720 | 0.804895 | 1.734186e-49 | -8.615850e-47 |
| Msa0469450 | Msa0777070 | 0.835239 | 1.883804e-56 | -8.615850e-47 |
| Msa0469450 | Msa0786940 | 0.805454 | 1.324849e-49 | -8.615850e-47 |
| Msa0469450 | Msa0787860 | 0.834102 | 3.639643e-56 | -8.615850e-47 |
| Msa0469450 | Msa0792330 | 0.806610 | 7.567171e-50 | -8.615850e-47 |
| Msa0469450 | Msa0798240 | 0.836024 | 1.191950e-56 | -8.615850e-47 |
| Msa0469450 | Msa0806930 | 0.820053 | 8.405640e-53 | -8.615850e-47 |
| Msa0469450 | Msa0814160 | 0.848152 | 7.354944e-60 | -8.615850e-47 |
| Msa0469450 | Msa0814230 | 0.803308 | 3.709363e-49 | -8.615850e-47 |
| Msa0469450 | Msa0816140 | 0.833037 | 6.710933e-56 | -8.615850e-47 |
| Msa0469450 | Msa0822410 | 0.812536 | 4.035377e-51 | -8.615850e-47 |
| Msa0469450 | Msa0824850 | 0.835588 | 1.537283e-56 | -8.615850e-47 |
| Msa0469450 | Msa0824860 | 0.824519 | 7.723503e-54 | -8.615850e-47 |
| Msa0469450 | Msa0831890 | 0.817014 | 4.108223e-52 | -8.615850e-47 |
| Msa0469450 | Msa0836750 | 0.823149 | 1.618379e-53 | -8.615850e-47 |
| Msa0469450 | Msa0841930 | 0.805827 | 1.105859e-49 | -8.615850e-47 |
| Msa0469450 | Msa0854840 | 0.835696 | 1.443576e-56 | -8.615850e-47 |
| Msa0469450 | Msa0861730 | 0.828407 | 9.147160e-55 | -8.615850e-47 |
| Msa0469450 | Msa0863840 | 0.828843 | 7.175108e-55 | -8.615850e-47 |
| Msa0469450 | Msa0863850 | 0.835600 | 1.527297e-56 | -8.615850e-47 |
| Msa0469450 | Msa0863860 | 0.827152 | 1.832238e-54 | -8.615850e-47 |
| Msa0469450 | Msa0864160 | 0.838318 | 3.087199e-57 | -8.615850e-47 |
| Msa0469450 | Msa0867080 | 0.807736 | 4.368753e-50 | -8.615850e-47 |
| Msa0469450 | Msa0868820 | 0.802907 | 4.488589e-49 | -8.615850e-47 |
| Msa0469450 | Msa0893840 | 0.832252 | 1.051021e-55 | -8.615850e-47 |
| Msa0469450 | Msa0896910 | 0.830077 | 3.596823e-55 | -8.615850e-47 |
| Msa0469450 | Msa0896920 | 0.849905 | 2.394578e-60 | -8.615850e-47 |
| Msa0469450 | Msa0896950 | 0.810699 | 1.012210e-50 | -8.615850e-47 |
| Msa0469450 | Msa0902340 | 0.813033 | 3.141535e-51 | -8.615850e-47 |
| Msa0469450 | Msa0910830 | 0.814721 | 1.334019e-51 | -8.615850e-47 |
| Msa0469450 | Msa0913550 | 0.835959 | 1.238761e-56 | -8.615850e-47 |
| Msa0469450 | Msa0921180 | 0.806837 | 6.776403e-50 | -8.615850e-47 |
| Msa0469450 | Msa0932890 | 0.810526 | 1.103565e-50 | -8.615850e-47 |
| Msa0469450 | Msa0932900 | 0.802010 | 6.871472e-49 | -8.615850e-47 |
| Msa0469450 | Msa0932930 | 0.811526 | 6.698246e-51 | -8.615850e-47 |
| Msa0469450 | Msa0933580 | 0.816498 | 5.360702e-52 | -8.615850e-47 |
| Msa0469450 | Msa0933590 | 0.811627 | 6.368852e-51 | -8.615850e-47 |
| Msa0469450 | Msa0933610 | 0.829049 | 6.395417e-55 | -8.615850e-47 |
| Msa0469450 | Msa0941120 | 0.811361 | 7.275363e-51 | -8.615850e-47 |
| Msa0469450 | Msa0946010 | 0.816486 | 5.395876e-52 | -8.615850e-47 |
| Msa0469450 | Msa0951150 | 0.810562 | 1.083986e-50 | -8.615850e-47 |
| Msa0469450 | Msa0967820 | 0.807236 | 5.578593e-50 | -8.615850e-47 |
| Msa0469450 | Msa0970790 | 0.806313 | 8.739142e-50 | -8.615850e-47 |
| Msa0469450 | Msa0976400 | 0.802568 | 5.273952e-49 | -8.615850e-47 |
| Msa0469450 | Msa0987640 | 0.809266 | 2.059535e-50 | -8.615850e-47 |
| Msa0469450 | Msa0993450 | 0.805551 | 1.264054e-49 | -8.615850e-47 |
| Msa0469450 | Msa0996980 | 0.815861 | 7.440633e-52 | -8.615850e-47 |
| Msa0469450 | Msa0998810 | 0.807480 | 4.952882e-50 | -8.615850e-47 |
| Msa0469450 | Msa1006030 | 0.807915 | 4.002281e-50 | -8.615850e-47 |
| Msa0469450 | Msa1006170 | 0.836416 | 9.476374e-57 | -8.615850e-47 |
| Msa0469450 | Msa1007940 | 0.807105 | 5.945536e-50 | -8.615850e-47 |
| Msa0469450 | Msa1009540 | 0.822147 | 2.766997e-53 | -8.615850e-47 |
| Msa0469450 | Msa1018590 | 0.832441 | 9.436597e-56 | -8.615850e-47 |
| Msa0469450 | Msa1021620 | 0.811310 | 7.463735e-51 | -8.615850e-47 |
| Msa0469450 | Msa1022490 | 0.904006 | 1.924428e-79 | -8.615850e-47 |
| Msa0469450 | Msa1022510 | 0.908960 | 9.641699e-82 | -8.615850e-47 |
| Msa0469450 | Msa1024350 | 0.864362 | 1.284028e-64 | -8.615850e-47 |
| Msa0469450 | Msa1024420 | 0.812916 | 3.332397e-51 | -8.615850e-47 |
| Msa0469450 | Msa1026050 | 0.809472 | 1.860749e-50 | -8.615850e-47 |
| Msa0469450 | Msa1026170 | 0.803372 | 3.597231e-49 | -8.615850e-47 |
| Msa0469450 | Msa1030320 | 0.822209 | 2.677804e-53 | -8.615850e-47 |
| Msa0469450 | Msa1037310 | 0.810139 | 1.337459e-50 | -8.615850e-47 |
| Msa0469450 | Msa1048350 | 0.838553 | 2.686316e-57 | -8.615850e-47 |
| Msa0469450 | Msa1048390 | 0.812360 | 4.409443e-51 | -8.615850e-47 |
| Msa0469450 | Msa1061670 | 0.857706 | 1.359960e-62 | -8.615850e-47 |
| Msa0469450 | Msa1063210 | 0.812562 | 3.983698e-51 | -8.615850e-47 |
| Msa0469450 | Msa1064930 | 0.805383 | 1.370716e-49 | -8.615850e-47 |
| Msa0469450 | Msa1064940 | 0.854837 | 9.432042e-62 | -8.615850e-47 |
| Msa0469450 | Msa1068080 | 0.829249 | 5.722517e-55 | -8.615850e-47 |
| Msa0469450 | Msa1076830 | 0.816182 | 6.308166e-52 | -8.615850e-47 |
| Msa0469450 | Msa1087370 | 0.834772 | 2.470291e-56 | -8.615850e-47 |
| Msa0469450 | Msa1087380 | 0.850001 | 2.251230e-60 | -8.615850e-47 |
| Msa0469450 | Msa1098100 | 0.829239 | 5.753613e-55 | -8.615850e-47 |
| Msa0469450 | Msa1100030 | 0.801390 | 9.209179e-49 | -8.615850e-47 |
| Msa0469450 | Msa1100330 | 0.813853 | 2.074456e-51 | -8.615850e-47 |
| Msa0469450 | Msa1104960 | 0.832537 | 8.931072e-56 | -8.615850e-47 |
| Msa0469450 | Msa1106680 | 0.876289 | 1.571715e-68 | -8.615850e-47 |
| Msa0469450 | Msa1106960 | 0.854618 | 1.091755e-61 | -8.615850e-47 |
| Msa0469450 | Msa1108370 | 0.814236 | 1.707173e-51 | -8.615850e-47 |
| Msa0469450 | Msa1108560 | 0.810888 | 9.214987e-51 | -8.615850e-47 |
| Msa0469450 | Msa1109880 | 0.840272 | 9.609590e-58 | -8.615850e-47 |
| Msa0469450 | Msa1109890 | 0.818719 | 1.692407e-52 | -8.615850e-47 |
| Msa0469450 | Msa1110040 | 0.810753 | 9.852076e-51 | -8.615850e-47 |
| Msa0469450 | Msa1120680 | 0.809939 | 1.476924e-50 | -8.615850e-47 |
| Msa0469450 | Msa1123000 | 0.801998 | 6.909495e-49 | -8.615850e-47 |
| Msa0469450 | Msa1138110 | 0.845640 | 3.580797e-59 | -8.615850e-47 |
| Msa0469450 | Msa1147030 | 0.833014 | 6.801633e-56 | -8.615850e-47 |
| Msa0469450 | Msa1148210 | 0.817752 | 2.802106e-52 | -8.615850e-47 |
| Msa0469450 | Msa1150760 | 0.805779 | 1.131914e-49 | -8.615850e-47 |
| Msa0469450 | Msa1153690 | 0.843251 | 1.571438e-58 | -8.615850e-47 |
| Msa0469450 | Msa1156240 | 0.824152 | 9.422899e-54 | -8.615850e-47 |
| Msa0469450 | Msa1157210 | 0.818999 | 1.462032e-52 | -8.615850e-47 |
| Msa0469450 | Msa1162430 | 0.811034 | 8.564556e-51 | -8.615850e-47 |
| Msa0469450 | Msa1170340 | 0.854334 | 1.318905e-61 | -8.615850e-47 |
| Msa0469450 | Msa1173290 | 0.813476 | 2.510698e-51 | -8.615850e-47 |
| Msa0469450 | Msa1177090 | 0.821557 | 3.790074e-53 | -8.615850e-47 |
| Msa0469450 | Msa1181090 | 0.812860 | 3.427652e-51 | -8.615850e-47 |
| Msa0469450 | Msa1186340 | 0.805761 | 1.142250e-49 | -8.615850e-47 |
| Msa0469450 | Msa1191350 | 0.807046 | 6.120723e-50 | -8.615850e-47 |
| Msa0469450 | Msa1214960 | 0.804368 | 2.234004e-49 | -8.615850e-47 |
| Msa0469450 | Msa1225850 | 0.805595 | 1.237528e-49 | -8.615850e-47 |
| Msa0469450 | Msa1231720 | 0.834688 | 2.593419e-56 | -8.615850e-47 |
| Msa0469450 | Msa1238250 | 0.802205 | 6.265016e-49 | -8.615850e-47 |
| Msa0469450 | Msa1245530 | 0.815501 | 8.948718e-52 | -8.615850e-47 |
| Msa0469450 | Msa1263120 | 0.800506 | 1.395712e-48 | -8.615850e-47 |
| Msa0469450 | Msa1267990 | 0.822244 | 2.627749e-53 | -8.615850e-47 |
| Msa0469450 | Msa1294020 | 0.800182 | 1.624637e-48 | -8.615850e-47 |
| Msa0469450 | Msa1300610 | 0.841141 | 5.687352e-58 | -8.615850e-47 |
| Msa0469450 | Msa1319030 | 0.810050 | 1.397821e-50 | -8.615850e-47 |
| Msa0469450 | Msa1319190 | 0.809229 | 2.097584e-50 | -8.615850e-47 |
| Msa0469450 | Msa1319290 | 0.803153 | 3.994246e-49 | -8.615850e-47 |
| Msa0469450 | Msa1321260 | 0.801003 | 1.105379e-48 | -8.615850e-47 |
| Msa0469450 | Msa1321970 | 0.819613 | 1.059176e-52 | -8.615850e-47 |
| Msa0469450 | Msa1322500 | 0.805733 | 1.157625e-49 | -8.615850e-47 |
| Msa0469450 | Msa1323120 | 0.813988 | 1.936797e-51 | -8.615850e-47 |
| Msa0469450 | Msa1323150 | 0.816053 | 6.740724e-52 | -8.615850e-47 |
| Msa0469450 | Msa1329740 | 0.833657 | 4.702884e-56 | -8.615850e-47 |
| Msa0469450 | Msa1341030 | 0.829037 | 6.441030e-55 | -8.615850e-47 |
| Msa0469450 | Msa1343590 | 0.817520 | 3.159498e-52 | -8.615850e-47 |
| Msa0469450 | Msa1355340 | 0.856818 | 2.487833e-62 | -8.615850e-47 |
| Msa0469450 | Msa1357840 | 0.808562 | 2.913973e-50 | -8.615850e-47 |
| Msa0469450 | Msa1357860 | 0.826028 | 3.396331e-54 | -8.615850e-47 |
| Msa0469450 | Msa1373560 | 0.810329 | 1.216877e-50 | -8.615850e-47 |
| Msa0469450 | Msa1376070 | 0.820825 | 5.588565e-53 | -8.615850e-47 |
| Msa0469450 | Msa1377520 | 0.816384 | 5.685504e-52 | -8.615850e-47 |
| Msa0469450 | Msa1380740 | 0.810785 | 9.700093e-51 | -8.615850e-47 |
| Msa0469450 | Msa1411550 | 0.863253 | 2.840482e-64 | -8.615850e-47 |
| Msa0469450 | Msa1421130 | 0.828025 | 1.130577e-54 | -8.615850e-47 |
| Msa0469450 | Msa1446090 | 0.800341 | 1.508214e-48 | -8.615850e-47 |
| Msa0469450 | Msa1453650 | 0.836208 | 1.070496e-56 | -8.615850e-47 |
| Msa0469450 | Msa1459610 | 0.836642 | 8.304346e-57 | -8.615850e-47 |
| Msa0469450 | Msa1461660 | 0.802462 | 5.545802e-49 | -8.615850e-47 |
| Msa0240990 | Msa0469450 | 0.811877 | 5.619942e-51 | -8.615850e-47 |
| Msa0242830 | Msa0469450 | 0.825636 | 4.207965e-54 | -8.615850e-47 |
| Msa0252930 | Msa0469450 | 0.831383 | 1.722497e-55 | -8.615850e-47 |
| Msa0258010 | Msa0469450 | 0.808487 | 3.024094e-50 | -8.615850e-47 |
| Msa0269240 | Msa0469450 | 0.804445 | 2.152537e-49 | -8.615850e-47 |
| Msa0272210 | Msa0469450 | 0.854905 | 9.016100e-62 | -8.615850e-47 |
| Msa0274250 | Msa0469450 | 0.839484 | 1.541896e-57 | -8.615850e-47 |
| Msa0274260 | Msa0469450 | 0.829231 | 5.779630e-55 | -8.615850e-47 |
| Msa0276580 | Msa0469450 | 0.836535 | 8.839495e-57 | -8.615850e-47 |
| Msa0278460 | Msa0469450 | 0.846049 | 2.771549e-59 | -8.615850e-47 |
| Msa0278950 | Msa0469450 | 0.832357 | 9.899580e-56 | -8.615850e-47 |
| Msa0280980 | Msa0469450 | 0.822331 | 2.507821e-53 | -8.615850e-47 |
| Msa0281190 | Msa0469450 | 0.852408 | 4.708630e-61 | -8.615850e-47 |
| Msa0288540 | Msa0469450 | 0.808501 | 3.002667e-50 | -8.615850e-47 |
| Msa0314440 | Msa0469450 | 0.818947 | 1.502416e-52 | -8.615850e-47 |
| Msa0316600 | Msa0469450 | 0.837654 | 4.576039e-57 | -8.615850e-47 |
| Msa0320150 | Msa0469450 | 0.807017 | 6.208186e-50 | -8.615850e-47 |
| Msa0328090 | Msa0469450 | 0.850392 | 1.749337e-60 | -8.615850e-47 |
| Msa0346170 | Msa0469450 | 0.836914 | 7.078626e-57 | -8.615850e-47 |
| Msa0348370 | Msa0469450 | 0.826552 | 2.547907e-54 | -8.615850e-47 |
| Msa0349910 | Msa0469450 | 0.854407 | 1.256504e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469450 | MtrunA17_Chr3g0124061 | 93.467 | 199 | 13 | 0 | 1 | 199 | 1 | 199 | 2.46e-140 | 389 |
| Msa0469450 | MtrunA17_Chr3g0124111 | 87.437 | 199 | 25 | 0 | 1 | 199 | 1 | 199 | 3.57e-131 | 366 |
| Msa0469450 | MtrunA17_Chr3g0124141 | 85.427 | 199 | 29 | 0 | 1 | 199 | 1 | 199 | 2.61e-125 | 351 |
| Msa0469450 | MtrunA17_Chr3g0124091 | 84.577 | 201 | 28 | 2 | 1 | 199 | 1 | 200 | 2.62e-121 | 341 |
| Msa0469450 | MtrunA17_Chr3g0124151 | 83.019 | 106 | 18 | 0 | 94 | 199 | 1 | 106 | 1.10e-61 | 187 |
| Msa0469450 | MtrunA17_Chr3g0124131 | 78.431 | 51 | 11 | 0 | 1 | 51 | 1 | 51 | 4.41e-24 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469450 | AT5G65030.1 | 30.964 | 197 | 124 | 3 | 11 | 199 | 10 | 202 | 4.26e-26 | 99.8 |
| Msa0469450 | AT5G10210.1 | 31.633 | 196 | 112 | 7 | 15 | 199 | 13 | 197 | 5.12e-24 | 94.4 |
Find 34 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACCAAATCAGTACCATTT+TGG | 0.165786 | 3_3:-71261974 | Msa0469450:CDS |
| ATAAGAGTAGGTTGAATAAT+TGG | 0.258714 | 3_3:-71261659 | Msa0469450:CDS |
| TTAATCTCCACTTCTACTTC+CGG | 0.353807 | 3_3:+71261720 | None:intergenic |
| TGCGCTTAGCGCAGCTTTGG+AGG | 0.362485 | 3_3:-71261568 | Msa0469450:CDS |
| TTAAATGACTCGTCCCAAAA+TGG | 0.387620 | 3_3:+71261960 | None:intergenic |
| GCTCCAACACTAGGCTTTGT+TGG | 0.406615 | 3_3:+71261895 | None:intergenic |
| AGTGGCTACGGTTCATGAAA+TGG | 0.409468 | 3_3:-71261691 | Msa0469450:CDS |
| GTCCCAAAATGGTACTGATT+TGG | 0.410434 | 3_3:+71261971 | None:intergenic |
| ATTTGCGCTTAGCGCAGCTT+TGG | 0.427353 | 3_3:-71261571 | Msa0469450:CDS |
| GATTCTAGAATCACTTTCCA+TGG | 0.440184 | 3_3:+71261822 | None:intergenic |
| GCAAGGCTGTATCTTCCAAC+AGG | 0.447411 | 3_3:-71262035 | Msa0469450:CDS |
| TGCACCAAGCGCGATGATCA+TGG | 0.461361 | 3_3:+71261613 | None:intergenic |
| TTGGAAAAGGTGAGATTCCA+TGG | 0.470388 | 3_3:-71261839 | Msa0469450:CDS |
| AAAGCCTAGTGTTGGAGCTA+AGG | 0.499139 | 3_3:-71261890 | Msa0469450:CDS |
| TTTGCCTTAGCTCCAACACT+AGG | 0.507447 | 3_3:+71261886 | None:intergenic |
| CAACTGAAGTTTGCATATGC+AGG | 0.509989 | 3_3:+71262119 | None:intergenic |
| GGGTCACAACTTATTGGAAA+AGG | 0.536727 | 3_3:-71261852 | Msa0469450:CDS |
| AGTGGAGATTAAAATAAGAG+TGG | 0.548596 | 3_3:-71261709 | Msa0469450:CDS |
| AATGAGTGTGGATGCAAGAA+TGG | 0.549203 | 3_3:-71261636 | Msa0469450:CDS |
| ATGGCCATGATCATCGCGCT+TGG | 0.550412 | 3_3:-71261617 | Msa0469450:CDS |
| GATTAAAATAAGAGTGGCTA+CGG | 0.551977 | 3_3:-71261703 | Msa0469450:CDS |
| GCTAAGGCAAAGGAAGATGT+GGG | 0.557016 | 3_3:-71261874 | Msa0469450:CDS |
| AGCTAAGGCAAAGGAAGATG+TGG | 0.560256 | 3_3:-71261875 | Msa0469450:CDS |
| TAACCAACAAAGCCTAGTGT+TGG | 0.564525 | 3_3:-71261898 | Msa0469450:CDS |
| TTGAAGATATATTTAGTGAG+TGG | 0.575240 | 3_3:-71261774 | Msa0469450:CDS |
| TTGAATAATTGGAATGAGTG+TGG | 0.579695 | 3_3:-71261648 | Msa0469450:CDS |
| GATTCTAGAATCACAAAACA+TGG | 0.587863 | 3_3:-71261811 | Msa0469450:CDS |
| TAGTGTTGGAGCTAAGGCAA+AGG | 0.590191 | 3_3:-71261884 | Msa0469450:CDS |
| CTCAACACCGGAAGTAGAAG+TGG | 0.592858 | 3_3:-71261727 | Msa0469450:CDS |
| AGAGGAAATGTTCTCAACAC+CGG | 0.624098 | 3_3:-71261739 | Msa0469450:CDS |
| GAGTGGAAGTGATTGCAAAG+AGG | 0.644927 | 3_3:-71261757 | Msa0469450:CDS |
| TAAGGCAAAGGAAGATGTGG+GGG | 0.660678 | 3_3:-71261872 | Msa0469450:CDS |
| AAACGTTGAATTCATCAAGT+CGG | 0.660973 | 3_3:-71262072 | Msa0469450:CDS |
| CTAAGGCAAAGGAAGATGTG+GGG | 0.689053 | 3_3:-71261873 | Msa0469450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAACATGGAGTTGAAAAAA+TGG | - | chr3_3:71261900-71261919 | Msa0469450:CDS | 25.0% |
| ! | TTGAAGATATATTTAGTGAG+TGG | - | chr3_3:71261923-71261942 | Msa0469450:CDS | 25.0% |
| ! | TGGAAAAGAAAAATAAGAGT+AGG | - | chr3_3:71262026-71262045 | Msa0469450:CDS | 25.0% |
| !! | ATAAGAGTAGGTTGAATAAT+TGG | - | chr3_3:71262038-71262057 | Msa0469450:CDS | 25.0% |
| AAACGTTGAATTCATCAAGT+CGG | - | chr3_3:71261625-71261644 | Msa0469450:CDS | 30.0% | |
| !!! | ATACTTTTGTTGTTTCCTGT+TGG | + | chr3_3:71261680-71261699 | None:intergenic | 30.0% |
| ! | TACCAAATCAGTACCATTTT+GGG | - | chr3_3:71261724-71261743 | Msa0469450:CDS | 30.0% |
| ! | AAGATTTTCCAAGAATTCCT+GGG | + | chr3_3:71261780-71261799 | None:intergenic | 30.0% |
| ! | TAAGATTTTCCAAGAATTCC+TGG | + | chr3_3:71261781-71261800 | None:intergenic | 30.0% |
| !! | GATTCTAGAATCACAAAACA+TGG | - | chr3_3:71261886-71261905 | Msa0469450:CDS | 30.0% |
| AGTGGAGATTAAAATAAGAG+TGG | - | chr3_3:71261988-71262007 | Msa0469450:CDS | 30.0% | |
| GATTAAAATAAGAGTGGCTA+CGG | - | chr3_3:71261994-71262013 | Msa0469450:CDS | 30.0% | |
| TTGAATAATTGGAATGAGTG+TGG | - | chr3_3:71262049-71262068 | Msa0469450:CDS | 30.0% | |
| ! | CTACCAAATCAGTACCATTT+TGG | - | chr3_3:71261723-71261742 | Msa0469450:CDS | 35.0% |
| TTAAATGACTCGTCCCAAAA+TGG | + | chr3_3:71261740-71261759 | None:intergenic | 35.0% | |
| ! | AGATTTTCCAAGAATTCCTG+GGG | + | chr3_3:71261779-71261798 | None:intergenic | 35.0% |
| !! | GATTCTAGAATCACTTTCCA+TGG | + | chr3_3:71261878-71261897 | None:intergenic | 35.0% |
| TTAATCTCCACTTCTACTTC+CGG | + | chr3_3:71261980-71261999 | None:intergenic | 35.0% | |
| CAACTGAAGTTTGCATATGC+AGG | + | chr3_3:71261581-71261600 | None:intergenic | 40.0% | |
| CGGCAAAAAACATGTTTGCA+AGG | - | chr3_3:71261645-71261664 | Msa0469450:CDS | 40.0% | |
| !! | GTCCCAAAATGGTACTGATT+TGG | + | chr3_3:71261729-71261748 | None:intergenic | 40.0% |
| ! | GATTTTCCAAGAATTCCTGG+GGG | + | chr3_3:71261778-71261797 | None:intergenic | 40.0% |
| TAACCAACAAAGCCTAGTGT+TGG | - | chr3_3:71261799-71261818 | Msa0469450:CDS | 40.0% | |
| GGGTCACAACTTATTGGAAA+AGG | - | chr3_3:71261845-71261864 | Msa0469450:CDS | 40.0% | |
| TTGGAAAAGGTGAGATTCCA+TGG | - | chr3_3:71261858-71261877 | Msa0469450:CDS | 40.0% | |
| AGAGGAAATGTTCTCAACAC+CGG | - | chr3_3:71261958-71261977 | Msa0469450:CDS | 40.0% | |
| AATGAGTGTGGATGCAAGAA+TGG | - | chr3_3:71262061-71262080 | Msa0469450:CDS | 40.0% | |
| ! | GCATATGCAGGTGTTTTCGA+TGG | + | chr3_3:71261569-71261588 | None:intergenic | 45.0% |
| ! | AAAGCCTAGTGTTGGAGCTA+AGG | - | chr3_3:71261807-71261826 | Msa0469450:CDS | 45.0% |
| TTTGCCTTAGCTCCAACACT+AGG | + | chr3_3:71261814-71261833 | None:intergenic | 45.0% | |
| ! | TAGTGTTGGAGCTAAGGCAA+AGG | - | chr3_3:71261813-71261832 | Msa0469450:CDS | 45.0% |
| AGCTAAGGCAAAGGAAGATG+TGG | - | chr3_3:71261822-71261841 | Msa0469450:CDS | 45.0% | |
| GCTAAGGCAAAGGAAGATGT+GGG | - | chr3_3:71261823-71261842 | Msa0469450:CDS | 45.0% | |
| CTAAGGCAAAGGAAGATGTG+GGG | - | chr3_3:71261824-71261843 | Msa0469450:CDS | 45.0% | |
| TAAGGCAAAGGAAGATGTGG+GGG | - | chr3_3:71261825-71261844 | Msa0469450:CDS | 45.0% | |
| ATGTGGGGGTCACAACTTAT+TGG | - | chr3_3:71261839-71261858 | Msa0469450:CDS | 45.0% | |
| GAGTGGAAGTGATTGCAAAG+AGG | - | chr3_3:71261940-71261959 | Msa0469450:CDS | 45.0% | |
| AGTGGCTACGGTTCATGAAA+TGG | - | chr3_3:71262006-71262025 | Msa0469450:CDS | 45.0% | |
| GCAAGGCTGTATCTTCCAAC+AGG | - | chr3_3:71261662-71261681 | Msa0469450:CDS | 50.0% | |
| TCTAGATTGTTCTTGCCCCC+AGG | - | chr3_3:71261760-71261779 | Msa0469450:CDS | 50.0% | |
| TTCTTGCCCCCAGGAATTCT+TGG | - | chr3_3:71261769-71261788 | Msa0469450:CDS | 50.0% | |
| ! | GCTCCAACACTAGGCTTTGT+TGG | + | chr3_3:71261805-71261824 | None:intergenic | 50.0% |
| CTCAACACCGGAAGTAGAAG+TGG | - | chr3_3:71261970-71261989 | Msa0469450:CDS | 50.0% | |
| ATTTGCGCTTAGCGCAGCTT+TGG | - | chr3_3:71262126-71262145 | Msa0469450:CDS | 50.0% | |
| ATGGCCATGATCATCGCGCT+TGG | - | chr3_3:71262080-71262099 | Msa0469450:CDS | 55.0% | |
| TGCACCAAGCGCGATGATCA+TGG | + | chr3_3:71262087-71262106 | None:intergenic | 55.0% | |
| ! | TGCGCTTAGCGCAGCTTTGG+AGG | - | chr3_3:71262129-71262148 | Msa0469450:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 71261560 | 71262159 | 71261560 | ID=Msa0469450;Name=Msa0469450 |
| chr3_3 | mRNA | 71261560 | 71262159 | 71261560 | ID=Msa0469450-mRNA-1;Parent=Msa0469450;Name=Msa0469450-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|199 |
| chr3_3 | exon | 71261560 | 71262159 | 71261560 | ID=Msa0469450-mRNA-1:exon:17523;Parent=Msa0469450-mRNA-1 |
| chr3_3 | CDS | 71261560 | 71262159 | 71261560 | ID=Msa0469450-mRNA-1:cds;Parent=Msa0469450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
