AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479540 MtrunA17_Chr3g0142921 95.810 358 15 0 1 358 1 358 0.0 704
Msa0479540 MtrunA17_Chr1g0156891 71.633 349 96 1 9 357 19 364 0.0 528
Msa0479540 MtrunA17_Chr1g0156911 67.324 355 112 2 3 357 7 357 3.93e-176 493
Msa0479540 MtrunA17_Chr1g0156901 65.634 355 121 1 3 357 17 370 7.46e-176 493
Msa0479540 MtrunA17_Chr1g0156931 64.986 357 120 3 1 357 9 360 5.08e-175 490
Msa0479540 MtrunA17_Chr1g0156921 64.124 354 122 3 5 357 14 363 1.38e-165 466
Msa0479540 MtrunA17_Chr3g0142941 65.569 334 114 1 24 357 35 367 6.69e-165 465
Msa0479540 MtrunA17_Chr8g0371491 52.394 355 165 3 5 358 7 358 4.26e-131 379
Msa0479540 MtrunA17_Chr8g0371471 51.929 337 158 3 24 357 27 362 1.58e-128 372
Msa0479540 MtrunA17_Chr8g0371481 51.775 338 158 4 24 357 27 363 1.62e-127 370
Msa0479540 MtrunA17_Chr5g0405821 53.153 333 154 2 28 358 35 367 1.69e-127 370
Msa0479540 MtrunA17_Chr5g0405831 50.751 333 161 3 28 358 35 366 5.51e-124 361
Msa0479540 MtrunA17_Chr1g0157001 44.268 314 171 3 41 353 41 351 1.40e-93 284
Msa0479540 MtrunA17_Chr5g0438621 42.284 324 185 2 35 357 29 351 1.40e-92 280
Msa0479540 MtrunA17_Chr5g0438631 42.202 327 182 6 35 357 27 350 1.87e-91 278
Msa0479540 MtrunA17_Chr5g0432101 40.793 353 198 5 6 355 5 349 1.86e-89 273
Msa0479540 MtrunA17_Chr3g0105401 41.411 326 186 5 35 357 27 350 1.84e-88 270
Msa0479540 MtrunA17_Chr3g0120861 40.308 325 192 2 35 358 37 360 3.36e-87 267
Msa0479540 MtrunA17_Chr8g0341001 40.116 344 198 4 9 350 10 347 4.47e-86 264
Msa0479540 MtrunA17_Chr2g0283191 40.373 322 181 5 35 346 37 357 1.62e-85 263
Msa0479540 MtrunA17_Chr2g0320671 39.748 317 189 2 35 350 29 344 6.65e-85 261
Msa0479540 MtrunA17_Chr4g0046151 38.558 319 187 3 36 346 36 353 1.90e-84 260
Msa0479540 MtrunA17_Chr5g0438641 37.709 358 208 3 1 357 10 353 3.86e-83 256
Msa0479540 MtrunA17_Chr2g0330781 39.623 318 189 3 35 350 30 346 7.47e-81 251
Msa0479540 MtrunA17_Chr6g0463261 95.082 122 6 0 89 210 3 124 7.65e-78 234
Msa0479540 MtrunA17_Chr5g0437421 39.062 320 186 4 35 347 31 348 1.33e-75 237
Msa0479540 MtrunA17_Chr4g0027521 38.585 311 186 4 35 341 26 335 9.91e-72 227
Msa0479540 MtrunA17_Chr2g0285061 35.370 311 191 7 35 340 31 336 1.80e-61 201
Msa0479540 MtrunA17_Chr8g0380041 35.161 310 192 6 35 340 30 334 2.56e-61 201
Msa0479540 MtrunA17_Chr3g0086641 33.626 342 208 9 1 339 15 340 7.80e-61 199
Msa0479540 MtrunA17_Chr3g0077571 35.599 309 190 7 35 341 29 330 4.05e-59 194
Msa0479540 MtrunA17_Chr3g0131321 33.626 342 220 5 5 341 3 342 1.02e-57 192
Msa0479540 MtrunA17_Chr2g0294301 36.760 321 190 8 36 347 35 351 4.00e-57 190
Msa0479540 MtrunA17_Chr3g0077581 34.835 333 197 11 29 352 29 350 1.06e-56 189
Msa0479540 MtrunA17_Chr7g0275011 35.077 325 199 6 32 350 30 348 1.65e-56 188
Msa0479540 MtrunA17_Chr8g0374101 31.956 363 229 8 3 354 10 365 2.63e-56 188
Msa0479540 MtrunA17_Chr5g0396511 33.333 306 200 4 38 341 48 351 3.48e-56 187
Msa0479540 MtrunA17_Chr4g0017431 34.194 310 198 5 35 341 30 336 7.80e-56 186
Msa0479540 MtrunA17_Chr5g0434621 34.516 310 191 6 37 341 26 328 6.08e-55 184
Msa0479540 MtrunA17_Chr7g0275021 32.670 352 219 7 4 350 10 348 1.36e-54 183
Msa0479540 MtrunA17_Chr2g0294311 36.223 323 183 9 35 341 31 346 1.43e-54 183
Msa0479540 MtrunA17_Chr1g0182811 36.039 308 191 5 36 339 33 338 2.08e-54 182
Msa0479540 MtrunA17_Chr4g0008851 31.405 363 225 8 3 357 12 358 5.51e-54 182
Msa0479540 MtrunA17_Chr3g0092131 32.609 322 205 6 38 353 25 340 3.24e-53 179
Msa0479540 MtrunA17_Chr4g0068441 35.503 338 198 8 8 340 18 340 3.43e-53 179
Msa0479540 MtrunA17_Chr7g0275001 33.856 319 206 4 36 351 25 341 3.81e-53 179
Msa0479540 MtrunA17_Chr1g0189901 33.981 309 198 5 36 341 31 336 6.39e-53 179
Msa0479540 MtrunA17_Chr4g0060811 31.366 322 209 6 38 353 29 344 1.41e-52 178
Msa0479540 MtrunA17_Chr7g0274991 32.831 332 214 6 30 355 27 355 2.00e-52 177
Msa0479540 MtrunA17_Chr1g0189891 33.856 319 198 7 36 350 29 338 7.35e-52 176
Msa0479540 MtrunA17_Chr6g0457921 33.746 323 206 7 33 350 25 344 1.05e-51 176
Msa0479540 MtrunA17_Chr4g0027571 37.736 212 131 1 140 350 3 214 2.64e-50 167
Msa0479540 MtrunA17_Chr1g0189931 33.333 318 206 5 36 350 32 346 1.44e-49 170
Msa0479540 MtrunA17_Chr3g0099161 33.642 324 199 6 35 349 91 407 4.96e-48 167
Msa0479540 MtrunA17_Chr7g0215961 32.573 307 188 6 36 339 33 323 2.49e-47 164
Msa0479540 MtrunA17_Chr5g0444401 31.700 347 213 8 3 341 5 335 5.02e-46 160
Msa0479540 MtrunA17_Chr8g0344941 31.677 322 197 9 36 345 41 351 6.82e-46 160
Msa0479540 MtrunA17_Chr3g0099151 33.229 319 192 8 35 341 86 395 2.15e-45 160
Msa0479540 MtrunA17_Chr3g0099231 32.716 324 201 6 35 349 27 342 5.10e-45 159
Msa0479540 MtrunA17_Chr8g0344931 32.081 346 218 9 1 341 1 334 2.50e-44 156
Msa0479540 MtrunA17_Chr2g0301641 30.141 355 231 7 7 349 9 358 4.05e-44 156
Msa0479540 MtrunA17_Chr8g0380031 31.889 323 203 8 22 341 70 378 4.29e-44 156
Msa0479540 MtrunA17_Chr2g0284921 31.003 329 202 9 35 350 33 349 1.01e-43 154
Msa0479540 MtrunA17_Chr8g0349321 31.742 356 214 13 5 350 10 346 1.48e-43 154
Msa0479540 MtrunA17_Chr3g0085881 31.190 311 193 10 35 341 32 325 3.03e-41 147
Msa0479540 MtrunA17_Chr8g0349341 30.145 345 215 12 5 340 10 337 1.08e-40 146
Msa0479540 MtrunA17_Chr2g0285001 33.871 310 191 9 35 340 32 331 7.28e-40 144
Msa0479540 MtrunA17_Chr7g0229581 46.429 140 74 1 212 350 8 147 1.06e-39 138
Msa0479540 MtrunA17_Chr5g0420811 33.435 329 192 12 23 339 12 325 4.52e-39 142
Msa0479540 MtrunA17_Chr2g0284991 31.731 312 194 11 35 340 32 330 3.80e-38 140
Msa0479540 MtrunA17_Chr8g0370951 31.366 322 198 9 32 339 27 339 3.79e-37 137
Msa0479540 MtrunA17_Chr7g0229591 35.238 210 126 3 1 210 4 203 7.49e-36 129
Msa0479540 MtrunA17_Chr8g0349301 31.613 310 192 12 1 308 8 299 1.57e-35 132
Msa0479540 MtrunA17_Chr2g0284951 30.769 312 193 11 35 340 32 326 2.46e-35 132
Msa0479540 MtrunA17_Chr3g0085231 31.310 313 191 10 35 341 30 324 1.14e-34 130
Msa0479540 MtrunA17_Chr2g0284941 31.310 313 177 11 35 342 32 311 1.44e-33 127
Msa0479540 MtrunA17_Chr8g0349331 27.616 344 195 11 5 341 10 306 5.22e-31 120
Msa0479540 MtrunA17_Chr1g0160011 28.571 364 210 14 14 341 9 358 1.37e-30 120
Msa0479540 MtrunA17_Chr1g0160031 29.006 362 203 14 23 346 21 366 2.25e-30 119
Msa0479540 MtrunA17_Chr8g0370981 31.650 297 162 12 35 310 43 319 7.56e-30 118
Msa0479540 MtrunA17_Chr1g0159991 28.378 370 211 14 12 341 1 356 6.09e-29 115
Msa0479540 MtrunA17_Chr7g0273101 26.113 337 213 9 31 341 24 350 4.38e-28 113
Msa0479540 MtrunA17_Chr6g0450731 27.035 344 208 12 34 358 31 350 5.45e-28 112
Msa0479540 MtrunA17_Chr2g0301581 30.499 341 193 13 31 351 29 345 1.20e-27 111
Msa0479540 MtrunA17_Chr8g0370961 29.902 204 136 3 140 341 20 218 2.16e-27 108
Msa0479540 MtrunA17_Chr6g0469521 42.742 124 70 1 209 331 29 152 3.10e-27 105
Msa0479540 MtrunA17_Chr7g0254461 26.765 340 206 13 33 341 40 367 7.08e-27 109
Msa0479540 MtrunA17_Chr1g0178931 27.744 328 207 11 37 355 38 344 8.09e-27 108
Msa0479540 MtrunA17_Chr4g0018571 40.559 143 84 1 209 350 28 170 8.52e-27 104
Msa0479540 MtrunA17_Chr6g0469511 46.429 112 59 1 35 146 29 139 9.43e-27 103
Msa0479540 MtrunA17_Chr1g0198351 29.060 351 205 16 5 342 17 336 1.58e-26 108
Msa0479540 MtrunA17_Chr2g0301541 29.706 340 197 12 31 351 29 345 1.98e-26 108
Msa0479540 MtrunA17_Chr2g0283481 27.660 329 212 11 33 342 44 365 2.39e-26 108
Msa0479540 MtrunA17_Chr3g0112821 29.619 341 203 15 32 351 26 350 3.19e-26 107
Msa0479540 MtrunA17_Chr8g0381581 24.339 378 235 12 14 353 11 375 8.05e-26 107
Msa0479540 MtrunA17_Chr7g0226941 26.648 349 216 10 30 350 27 363 1.07e-25 106
Msa0479540 MtrunA17_Chr2g0283511 27.327 333 212 12 41 351 36 360 1.24e-25 106
Msa0479540 MtrunA17_Chr7g0271551 28.829 333 207 13 33 350 32 349 1.56e-25 105
Msa0479540 MtrunA17_Chr4g0027561 44.186 129 62 3 1 129 4 122 1.73e-25 100
Msa0479540 MtrunA17_Chr1g0191461 27.066 351 213 12 31 352 26 362 2.49e-25 105
Msa0479540 MtrunA17_Chr3g0104821 27.794 349 209 14 31 351 39 372 6.77e-25 104
Msa0479540 MtrunA17_Chr2g0317261 28.402 338 204 12 32 351 26 343 1.31e-24 103
Msa0479540 MtrunA17_Chr1g0178941 27.928 333 210 13 37 356 41 356 2.10e-24 102
Msa0479540 MtrunA17_Chr1g0159981 26.686 341 197 14 35 341 45 366 3.67e-24 102
Msa0479540 MtrunA17_Chr2g0317271 28.402 338 204 12 32 351 26 343 4.11e-24 101
Msa0479540 MtrunA17_Chr0c01g0489581 28.107 338 205 12 32 351 26 343 1.01e-23 100
Msa0479540 MtrunA17_Chr3g0093031 29.855 345 202 16 32 351 26 355 1.67e-23 100
Msa0479540 MtrunA17_Chr1g0160101 25.266 376 212 14 5 341 18 363 1.76e-23 100
Msa0479540 MtrunA17_Chr0c01g0489571 28.107 338 205 12 32 351 26 343 2.07e-23 99.8
Msa0479540 MtrunA17_Chr6g0455661 29.204 226 154 4 130 351 233 456 2.05e-22 98.2
Msa0479540 MtrunA17_Chr6g0455661 50.000 92 41 4 35 126 30 116 1.99e-15 77.4
Msa0479540 MtrunA17_Chr1g0159971 25.543 368 230 13 6 346 21 371 2.90e-22 97.1
Msa0479540 MtrunA17_Chr8g0347751 28.529 340 196 16 34 341 34 358 4.12e-22 96.3
Msa0479540 MtrunA17_Chr8g0352901 25.439 342 220 9 34 350 26 357 5.85e-22 95.9
Msa0479540 MtrunA17_Chr7g0266061 26.235 324 206 12 37 349 43 344 6.87e-22 95.5
Msa0479540 MtrunA17_Chr7g0275291 27.405 343 201 14 34 346 31 355 9.01e-22 95.5
Msa0479540 MtrunA17_Chr4g0027581 36.054 147 71 2 227 350 41 187 1.14e-21 91.7
Msa0479540 MtrunA17_Chr1g0198381 28.228 333 195 14 37 351 3 309 1.88e-21 93.6
Msa0479540 MtrunA17_Chr6g0459921 29.864 221 149 4 135 351 127 345 2.46e-21 94.0
Msa0479540 MtrunA17_Chr2g0283501 27.434 339 217 12 34 351 29 359 3.29e-21 93.6
Msa0479540 MtrunA17_Chr4g0057991 25.779 353 233 13 17 351 20 361 3.88e-21 93.6
Msa0479540 MtrunA17_Chr6g0450711 26.496 351 212 13 34 358 120 450 5.73e-21 93.6
Msa0479540 MtrunA17_Chr6g0450721 26.549 339 214 12 34 358 31 348 7.58e-21 92.4
Msa0479540 MtrunA17_Chr7g0226911 25.501 349 216 11 34 350 33 369 1.37e-20 92.0
Msa0479540 MtrunA17_Chr5g0440501 25.909 220 156 3 133 345 7 226 6.03e-19 85.1
Msa0479540 MtrunA17_Chr2g0301551 28.421 285 166 10 86 351 36 301 1.08e-18 85.5
Msa0479540 MtrunA17_Chr2g0301571 28.421 285 166 10 86 351 36 301 1.35e-18 85.5
Msa0479540 MtrunA17_Chr2g0301591 31.086 267 140 10 34 283 32 271 2.35e-18 84.3
Msa0479540 MtrunA17_Chr6g0450701 24.784 347 216 11 33 354 36 362 3.37e-18 85.1
Msa0479540 MtrunA17_Chr2g0283531 24.654 361 248 10 8 350 3 357 4.24e-17 81.6
Msa0479540 MtrunA17_Chr3g0112691 29.360 344 199 16 34 351 28 353 6.07e-17 81.3
Msa0479540 MtrunA17_Chr8g0339251 24.038 312 208 9 34 330 26 323 1.65e-16 79.7
Msa0479540 MtrunA17_Chr2g0321991 47.778 90 44 3 35 123 32 119 3.59e-16 74.3
Msa0479540 MtrunA17_Chr3g0096551 28.962 366 186 20 34 351 27 366 4.12e-16 79.0
Msa0479540 MtrunA17_Chr1g0198391 27.635 351 189 14 37 349 34 357 5.05e-16 78.6
Msa0479540 MtrunA17_Chr1g0189921 47.727 88 44 2 36 123 31 116 7.87e-15 71.2
Msa0479540 MtrunA17_Chr5g0432081 45.455 66 31 1 289 354 3 63 5.68e-14 66.6
Msa0479540 MtrunA17_Chr4g0018561 44.828 87 38 3 1 87 4 80 6.88e-14 67.0
Msa0479540 MtrunA17_Chr1g0178961 23.837 172 120 5 195 358 50 218 8.11e-13 67.0
Msa0479540 MtrunA17_Chr2g0301561 29.386 228 135 8 86 296 36 254 1.16e-12 67.4
Msa0479540 MtrunA17_Chr3g0104801 36.054 147 72 7 34 169 42 177 1.96e-12 65.1
Msa0479540 MtrunA17_Chr4g0027531 43.836 73 32 2 1 73 4 67 9.70e-12 60.1
Msa0479540 MtrunA17_Chr1g0198401 27.203 261 162 11 109 357 25 269 3.72e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479540 AT1G75900.1 54.885 348 152 4 11 357 20 363 6.47e-137 394
Msa0479540 AT1G75890.2 52.436 349 162 2 7 354 21 366 2.62e-133 385
Msa0479540 AT1G75890.3 52.436 349 162 2 7 354 50 395 2.70e-133 386
Msa0479540 AT1G75880.2 53.090 356 163 3 4 358 22 374 1.12e-131 381
Msa0479540 AT1G75880.1 52.941 357 163 4 4 358 22 375 6.67e-130 377
Msa0479540 AT1G75890.1 50.552 362 162 3 7 354 21 379 1.33e-129 376
Msa0479540 AT3G14820.1 50.857 350 162 5 5 353 5 345 2.00e-122 357
Msa0479540 AT5G42170.1 50.746 335 160 3 24 357 38 368 8.92e-122 356
Msa0479540 AT1G20120.1 48.024 329 169 2 31 358 73 400 2.77e-118 348
Msa0479540 AT1G20132.1 50.000 326 161 2 31 355 56 380 1.94e-113 335
Msa0479540 AT1G59406.1 48.788 330 162 5 31 358 25 349 8.49e-111 327
Msa0479540 AT1G59030.1 48.788 330 162 5 31 358 25 349 8.49e-111 327
Msa0479540 AT1G58725.1 48.788 330 162 5 31 358 25 349 8.49e-111 327
Msa0479540 AT1G58520.3 47.576 330 159 6 31 358 25 342 4.55e-103 307
Msa0479540 AT1G58525.1 47.576 330 159 6 31 358 25 342 4.55e-103 307
Msa0479540 AT3G43570.1 44.985 329 147 5 31 358 25 320 3.63e-98 294
Msa0479540 AT1G20130.2 43.750 336 174 4 31 355 179 510 6.89e-95 292
Msa0479540 AT1G20130.1 43.750 336 174 4 31 355 199 530 2.78e-94 291
Msa0479540 AT2G31540.1 43.344 323 178 3 34 351 33 355 3.30e-93 283
Msa0479540 AT5G63170.1 45.338 311 156 4 33 342 25 322 4.51e-92 279
Msa0479540 AT2G04570.1 40.286 350 200 3 9 357 8 349 1.23e-91 278
Msa0479540 AT1G06990.1 40.113 354 208 3 5 355 5 357 2.09e-91 278
Msa0479540 AT2G30220.1 43.438 320 171 3 34 347 31 346 2.57e-90 275
Msa0479540 AT1G58430.1 40.988 344 194 3 11 352 17 353 4.64e-90 275
Msa0479540 AT3G43550.1 48.789 289 135 5 9 296 10 286 8.19e-90 271
Msa0479540 AT1G73610.1 43.038 316 165 4 31 345 30 331 1.07e-89 273
Msa0479540 AT2G30310.1 41.791 335 185 3 23 347 13 347 1.53e-89 273
Msa0479540 AT5G03810.1 40.994 322 187 3 35 354 29 349 3.67e-87 267
Msa0479540 AT1G23500.1 46.645 313 153 4 31 342 30 329 7.38e-86 263
Msa0479540 AT2G42990.1 39.763 337 200 3 23 358 15 349 7.73e-86 263
Msa0479540 AT4G26790.1 38.838 327 198 2 32 357 25 350 8.32e-86 263
Msa0479540 AT4G26790.2 38.838 327 198 2 32 357 25 350 8.32e-86 263
Msa0479540 AT2G24560.1 40.190 316 187 2 34 347 32 347 1.09e-85 263
Msa0479540 AT2G40250.1 40.000 330 188 4 30 352 30 356 1.11e-85 263
Msa0479540 AT5G22810.1 40.312 320 186 3 35 350 33 351 9.56e-84 258
Msa0479540 AT5G45960.1 39.130 322 190 3 33 349 44 364 1.20e-82 256
Msa0479540 AT1G20135.1 41.270 315 171 4 33 346 26 327 8.29e-82 253
Msa0479540 AT5G03820.1 39.628 323 191 3 35 354 32 353 3.96e-81 252
Msa0479540 AT5G03820.2 39.628 323 191 3 35 354 60 381 1.15e-80 251
Msa0479540 AT3G53100.1 38.318 321 196 2 35 354 28 347 7.26e-80 248
Msa0479540 AT3G16370.1 39.308 318 190 3 35 350 29 345 1.56e-79 248
Msa0479540 AT1G75920.2 42.462 325 171 6 31 351 24 336 1.17e-77 242
Msa0479540 AT1G75910.1 41.667 324 176 5 31 351 23 336 4.56e-76 238
Msa0479540 AT1G75920.1 40.588 340 171 7 31 351 19 346 1.74e-73 232
Msa0479540 AT5G45950.1 33.241 361 229 6 4 358 2 356 1.36e-67 217
Msa0479540 AT1G75920.4 39.871 311 172 5 45 351 9 308 3.05e-67 214
Msa0479540 AT1G75930.1 40.491 326 174 9 31 350 24 335 3.98e-66 213
Msa0479540 AT2G24560.2 40.000 265 157 2 34 296 32 296 4.28e-65 209
Msa0479540 AT5G08460.1 33.819 343 213 6 4 340 23 357 4.33e-61 201
Msa0479540 AT4G10950.2 33.851 322 206 6 30 347 64 382 6.67e-61 201
Msa0479540 AT5G45670.1 34.727 311 195 6 35 341 28 334 2.57e-59 196
Msa0479540 AT1G71691.2 36.741 313 182 9 35 341 54 356 5.28e-59 195
Msa0479540 AT1G29670.1 35.256 312 190 8 35 341 31 335 1.82e-58 193
Msa0479540 AT4G10950.1 33.851 322 202 7 30 347 64 378 2.22e-58 194
Msa0479540 AT1G75920.3 36.615 325 159 7 31 351 24 305 4.24e-58 191
Msa0479540 AT1G29670.2 35.256 312 190 8 35 341 99 403 7.29e-58 194
Msa0479540 AT1G33811.1 33.048 351 218 10 1 341 1 344 1.62e-57 191
Msa0479540 AT4G28780.1 32.184 348 231 5 11 355 5 350 2.42e-57 191
Msa0479540 AT2G23540.1 34.056 323 204 6 36 350 48 369 2.77e-57 191
Msa0479540 AT5G41890.1 35.775 355 200 9 2 341 7 348 2.79e-57 191
Msa0479540 AT3G50400.1 33.639 327 207 7 33 350 31 356 1.73e-56 189
Msa0479540 AT5G37690.1 32.670 352 219 7 4 350 1 339 1.75e-56 188
Msa0479540 AT4G18970.1 33.441 311 199 6 35 341 27 333 1.11e-55 186
Msa0479540 AT4G18970.2 33.441 311 199 6 35 341 27 333 2.94e-55 186
Msa0479540 AT5G15720.1 36.102 313 190 8 35 341 29 337 3.03e-55 185
Msa0479540 AT1G29660.1 31.594 345 218 8 5 345 10 340 9.47e-55 184
Msa0479540 AT5G33370.1 33.235 340 212 7 25 355 19 352 7.99e-54 181
Msa0479540 AT3G04290.1 33.234 334 214 6 28 355 21 351 2.28e-53 180
Msa0479540 AT1G71250.1 33.758 314 202 5 35 345 40 350 4.02e-52 177
Msa0479540 AT5G37690.2 31.818 352 214 8 4 350 1 331 5.15e-52 176
Msa0479540 AT5G55050.1 35.522 335 199 8 32 355 35 363 2.02e-51 176
Msa0479540 AT1G74460.1 31.056 322 210 6 38 353 25 340 1.10e-50 173
Msa0479540 AT5G18430.1 31.447 318 214 3 36 350 28 344 5.00e-50 171
Msa0479540 AT2G31550.1 38.785 214 126 3 143 351 1 214 7.41e-50 167
Msa0479540 AT1G53920.1 30.058 346 230 7 8 347 20 359 2.19e-48 167
Msa0479540 AT2G19010.2 32.865 356 204 13 1 341 18 353 4.67e-47 164
Msa0479540 AT2G19010.1 34.824 313 180 11 35 341 29 323 7.57e-47 162
Msa0479540 AT2G19060.1 33.439 314 185 10 35 341 29 325 7.89e-46 160
Msa0479540 AT2G19050.1 33.546 313 184 11 35 341 30 324 6.21e-45 157
Msa0479540 AT5G33370.2 32.288 319 198 7 25 337 19 325 3.03e-42 150
Msa0479540 AT1G71120.1 32.907 313 195 8 35 342 30 332 3.39e-42 150
Msa0479540 AT4G16230.1 36.508 252 146 6 4 251 5 246 6.08e-42 147
Msa0479540 AT1G71691.3 35.448 268 157 9 35 296 54 311 1.16e-41 148
Msa0479540 AT2G03980.2 32.704 318 190 11 33 339 40 344 6.67e-41 147
Msa0479540 AT2G03980.3 32.704 318 190 11 33 339 40 344 6.67e-41 147
Msa0479540 AT2G03980.1 32.704 318 190 11 33 339 40 344 6.67e-41 147
Msa0479540 AT2G03980.4 32.704 318 190 11 33 339 40 344 6.67e-41 147
Msa0479540 AT5G15720.2 35.448 268 163 8 35 296 29 292 2.63e-40 144
Msa0479540 AT4G30140.1 31.429 315 198 9 35 347 32 330 8.08e-40 144
Msa0479540 AT5G40990.1 30.745 322 203 8 36 345 37 350 9.46e-40 144
Msa0479540 AT1G53940.2 30.699 329 194 11 36 345 39 352 1.15e-39 144
Msa0479540 AT3G14225.2 29.155 343 222 8 12 345 20 350 1.35e-39 144
Msa0479540 AT3G14225.1 29.191 346 222 8 12 345 20 354 1.80e-39 144
Msa0479540 AT2G19050.2 34.127 252 152 8 35 283 30 270 2.33e-36 133
Msa0479540 AT1G71691.1 31.538 260 164 7 88 341 4 255 3.27e-36 133
Msa0479540 AT1G53990.1 29.945 364 206 13 4 345 5 341 4.06e-36 135
Msa0479540 AT5G15720.3 31.076 251 167 5 97 341 56 306 8.23e-33 125
Msa0479540 AT2G04020.1 37.238 239 123 10 17 243 25 248 1.32e-31 120
Msa0479540 AT3G05180.1 27.679 336 203 9 34 341 34 357 2.15e-31 122
Msa0479540 AT2G04020.2 37.611 226 116 9 17 232 25 235 9.37e-31 119
Msa0479540 AT5G03610.1 30.931 333 196 13 37 354 44 357 1.94e-29 116
Msa0479540 AT1G28610.2 29.155 343 201 14 36 351 31 358 1.96e-29 117
Msa0479540 AT1G54000.1 28.165 316 196 9 36 341 36 330 4.44e-29 116
Msa0479540 AT1G54790.3 25.915 355 211 12 23 341 15 353 8.58e-29 115
Msa0479540 AT1G53940.1 30.325 277 165 10 36 299 39 300 1.38e-28 113
Msa0479540 AT1G54020.2 29.573 328 199 11 23 341 18 322 2.41e-28 114
Msa0479540 AT1G54010.1 26.705 352 219 11 2 341 6 330 1.06e-27 112
Msa0479540 AT2G27360.1 28.261 368 217 13 2 342 6 353 2.09e-27 111
Msa0479540 AT3G09930.2 30.631 333 198 12 37 354 40 354 2.46e-27 110
Msa0479540 AT3G09930.1 30.631 333 198 12 37 354 40 354 2.46e-27 110
Msa0479540 AT3G26430.1 26.286 350 216 13 30 349 25 362 5.76e-26 107
Msa0479540 AT1G54790.1 25.444 338 214 12 31 341 26 352 9.05e-26 107
Msa0479540 AT1G28650.1 27.346 373 233 16 1 350 7 364 4.27e-25 105
Msa0479540 AT1G28570.1 27.200 375 225 14 5 351 8 362 6.19e-25 104
Msa0479540 AT5G14450.1 25.916 382 234 11 1 350 11 375 7.40e-25 104
Msa0479540 AT1G28640.1 26.471 340 217 14 34 350 33 362 7.92e-25 104
Msa0479540 AT1G28590.1 27.826 345 210 14 33 351 33 364 3.18e-24 102
Msa0479540 AT4G01130.1 27.941 340 198 11 34 341 32 356 5.12e-24 102
Msa0479540 AT1G28600.1 27.920 351 205 15 30 350 25 357 5.35e-24 102
Msa0479540 AT1G28580.1 27.273 341 215 12 33 350 34 364 7.23e-24 101
Msa0479540 AT1G54030.1 25.566 309 202 10 32 336 47 331 1.01e-23 101
Msa0479540 AT1G28670.1 27.647 340 214 14 34 350 33 363 1.22e-23 100
Msa0479540 AT1G31550.2 26.822 343 215 13 33 351 33 363 4.68e-23 99.8
Msa0479540 AT1G67830.1 25.444 338 210 11 34 341 28 353 1.40e-22 97.8
Msa0479540 AT5G45910.1 27.957 372 222 17 11 350 5 362 1.48e-22 97.8
Msa0479540 AT3G48460.1 25.613 367 229 15 10 350 13 361 1.50e-22 97.8
Msa0479540 AT1G09390.1 28.349 321 204 12 35 341 36 344 1.51e-22 97.8
Msa0479540 AT5G03600.1 27.744 328 199 15 35 349 13 315 4.75e-22 95.5
Msa0479540 AT3G27950.1 25.000 368 235 12 6 350 6 355 5.17e-22 96.3
Msa0479540 AT5G03600.2 27.778 360 216 18 3 349 22 350 6.76e-22 95.9
Msa0479540 AT3G14220.1 25.926 351 226 12 6 347 7 332 1.35e-21 95.1
Msa0479540 AT1G31550.1 26.316 342 215 13 33 351 33 360 2.64e-21 94.4
Msa0479540 AT1G54790.2 24.451 364 211 15 31 341 26 378 5.86e-21 93.6
Msa0479540 AT1G28660.1 25.074 339 223 12 34 350 33 362 3.50e-20 91.3
Msa0479540 AT1G56670.1 25.348 359 208 15 17 341 15 347 1.92e-19 89.0
Msa0479540 AT3G14210.1 26.284 331 210 14 30 349 33 340 2.55e-19 89.0
Msa0479540 AT1G28660.2 25.074 339 222 13 34 350 33 361 6.17e-19 87.4
Msa0479540 AT4G01130.3 27.839 273 160 9 101 341 3 270 3.70e-18 84.3
Msa0479540 AT4G01130.2 26.837 313 191 11 34 323 32 329 2.50e-17 82.4
Msa0479540 AT1G54030.2 25.185 270 176 8 31 296 46 293 5.03e-17 81.3
Msa0479540 AT4G16220.1 48.421 95 44 3 35 129 29 118 1.42e-16 79.0
Msa0479540 AT2G36325.1 27.914 326 201 12 37 350 48 351 1.69e-16 80.1
Msa0479540 AT1G54020.1 27.237 257 159 9 92 341 1 236 2.04e-16 79.0
Msa0479540 AT1G54020.5 27.237 257 159 9 92 341 1 236 2.04e-16 79.0
Msa0479540 AT1G54020.3 27.237 257 159 9 92 341 1 236 2.04e-16 79.0
Msa0479540 AT4G16233.1 37.000 100 62 1 242 340 3 102 1.16e-15 73.6
Msa0479540 AT5G03980.1 27.311 238 135 9 132 347 90 311 2.56e-13 70.5
Msa0479540 AT1G54020.4 30.612 147 93 4 202 341 43 187 9.63e-13 67.8
Msa0479540 AT1G28610.1 31.188 202 105 9 36 212 31 223 2.86e-12 66.6
Msa0479540 AT1G56670.2 25.161 310 175 14 17 296 15 297 4.33e-12 66.6
Msa0479540 AT1G28580.2 23.860 285 187 10 87 350 8 283 2.71e-11 64.3
Msa0479540 AT3G62280.2 25.632 277 171 12 35 296 35 291 3.98e-11 63.5

Find 102 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTTCCAATTTCTTAA+AGG 0.119113 3_3:-84547284 Msa0479540:intron
GGAATTTCTGCCGGCGTATT+TGG 0.151357 3_3:-84547704 Msa0479540:CDS
GGTTATACATACCATAATTT+TGG 0.186894 3_3:+84546164 None:intergenic
GGAGTATACCTTTAAGAAAT+TGG 0.202417 3_3:+84547276 None:intergenic
GATTTGTTTCTTCATATTAT+TGG 0.211092 3_3:-84549906 Msa0479540:CDS
TGCTTTGCATCCGGTGGTTC+CGG 0.214847 3_3:-84547643 Msa0479540:CDS
AGATCGCTAGGTTGGATATT+TGG 0.224125 3_3:+84547679 None:intergenic
CAAAATACGTACCGCAGTTT+TGG 0.248518 3_3:+84547603 None:intergenic
CTTCACATTGGATAGCAAAT+TGG 0.263085 3_3:+84544833 None:intergenic
ATTTGTTTCTTCATATTATT+GGG 0.275115 3_3:-84549905 Msa0479540:CDS
CTATCCAATGTGAAGATGTT+AGG 0.281153 3_3:-84544825 Msa0479540:CDS
AGAACGGTTGTTGGAGGAAT+TGG 0.284213 3_3:-84546337 Msa0479540:CDS
ATCCTAAATTACCAAAATTA+TGG 0.287607 3_3:-84546175 Msa0479540:intron
AGTTGAAGCATTGGGAATTA+AGG 0.290367 3_3:-84547725 Msa0479540:CDS
TTACACAACTAAGGCTAGTT+TGG 0.309693 3_3:-84549873 Msa0479540:CDS
GCTTTGCATCCGGTGGTTCC+GGG 0.335556 3_3:-84547642 Msa0479540:CDS
TCCTTGTATTGGGCAAGTTC+CGG 0.360940 3_3:+84546236 None:intergenic
CCTTTGAAATCTTTCCCATA+TGG 0.381210 3_3:+84549731 None:intergenic
CTAGGATATTCTAAAGAGTA+TGG 0.382280 3_3:-84539758 Msa0479540:three_prime_UTR
TTTCCAGCAGTATTTGTGTT+TGG 0.389965 3_3:-84549821 Msa0479540:CDS
CCAACAACCGTTCTCTGAAA+TGG 0.393821 3_3:+84546346 None:intergenic
AAGGTAAACCATCCTTGTAT+TGG 0.397559 3_3:+84546225 None:intergenic
GTATTAAGTGTTCCACCAAT+TGG 0.400126 3_3:-84546376 Msa0479540:CDS
AGGAGTTGGCTTCTCTTAAC+CGG 0.406431 3_3:-84546255 Msa0479540:CDS
GAATACATAGGAAAGCTAAA+AGG 0.412985 3_3:-84547457 Msa0479540:CDS
AGGTAAACCATCCTTGTATT+GGG 0.414912 3_3:+84546226 None:intergenic
GGAAAGCTAAAAGGAATTGT+TGG 0.438571 3_3:-84547448 Msa0479540:CDS
AGTTATTTCTTACACAACTA+AGG 0.439754 3_3:-84549882 Msa0479540:CDS
CCATTTCAGAGAACGGTTGT+TGG 0.447437 3_3:-84546346 Msa0479540:CDS
TTTAATATATAGTAAGTAGA+TGG 0.449870 3_3:-84539782 Msa0479540:intron
TGGAGATTCAATCATGGATA+CGG 0.452846 3_3:-84549801 Msa0479540:CDS
AAAGTTCCATCAGACTATAT+AGG 0.464467 3_3:-84549677 Msa0479540:intron
TATTAAGTGTTCCACCAATT+GGG 0.465838 3_3:-84546375 Msa0479540:CDS
CATACTCTTTAGAATATCCT+AGG 0.480436 3_3:+84539759 None:intergenic
CACTAAATTATCAAAGGAGT+TGG 0.484343 3_3:-84546269 Msa0479540:CDS
TCTCCAAACACAAATACTGC+TGG 0.484675 3_3:+84549818 None:intergenic
TGAAATGGCACACACCCAAT+TGG 0.488937 3_3:+84546361 None:intergenic
TTTGAACAAATCTATTTGAC+CGG 0.492132 3_3:+84547480 None:intergenic
ACAGGTGTTTGCTTTGCATC+CGG 0.493934 3_3:-84547652 Msa0479540:CDS
CAACTTGGTGCAAGGAGGAT+AGG 0.496825 3_3:-84546400 Msa0479540:CDS
CATATTGTAGTTCTCTAAGA+TGG 0.497600 3_3:+84547338 None:intergenic
TATCCAATGTGAAGATGTTA+GGG 0.498721 3_3:-84544824 Msa0479540:CDS
ACTGCTGGAAATGAAACATT+TGG 0.500213 3_3:+84549833 None:intergenic
ATTGAACCCGTGCGAAGCAC+GGG 0.502062 3_3:+84544603 None:intergenic
TTCAAAGGAGGCATCCCTAC+TGG 0.506470 3_3:-84549716 Msa0479540:CDS
CAAATCTATTTGACCGGACA+AGG 0.513180 3_3:+84547486 None:intergenic
TGATATATCAGTTGAAGCAT+TGG 0.514954 3_3:-84547734 Msa0479540:intron
GACAAAGGATGTTGTGGCAC+AGG 0.516730 3_3:-84544883 Msa0479540:CDS
TTTCAGAGAACGGTTGTTGG+AGG 0.525737 3_3:-84546343 Msa0479540:CDS
GATATATCAGTTGAAGCATT+GGG 0.530185 3_3:-84547733 Msa0479540:intron
TGTGTTTGGAGATTCAATCA+TGG 0.530748 3_3:-84549807 Msa0479540:CDS
CAGTCAGCTATATCCTTGTC+CGG 0.530888 3_3:-84547499 Msa0479540:CDS
GGGAATTAAGGAATTTCTGC+CGG 0.532610 3_3:-84547713 Msa0479540:CDS
GGAGATTCAATCATGGATAC+GGG 0.535105 3_3:-84549800 Msa0479540:CDS
TCCTTCTTACACTGACCTCA+TGG 0.539258 3_3:-84547311 Msa0479540:CDS
CAAGGAAAACACTGTTGGCT+AGG 0.539625 3_3:+84547404 None:intergenic
ATATAGTAAGTAGATGGCCT+AGG 0.540964 3_3:-84539776 Msa0479540:intron
TATTGAACCCGTGCGAAGCA+CGG 0.541415 3_3:+84544602 None:intergenic
GAAGAGGATTGTAAACATCA+AGG 0.543970 3_3:+84546206 None:intergenic
TTGTGGCACAGGAGCAGTAG+AGG 0.546163 3_3:-84544872 Msa0479540:CDS
TTACAAACCCGTGCTTCGCA+CGG 0.546275 3_3:-84544610 Msa0479540:three_prime_UTR
TACAAACCCGTGCTTCGCAC+GGG 0.554497 3_3:-84544609 Msa0479540:intron
ATTCAACACTAAATTATCAA+AGG 0.555461 3_3:-84546275 Msa0479540:CDS
TGGATCATACCCGGAACCAC+CGG 0.557250 3_3:+84547633 None:intergenic
TATGTACCTATATAGTCTGA+TGG 0.557306 3_3:+84549671 None:intergenic
AATGGCACACACCCAATTGG+TGG 0.562040 3_3:+84546364 None:intergenic
ACCGGAACTTGCCCAATACA+AGG 0.563043 3_3:-84546237 Msa0479540:CDS
GCTAAAAGGAATTGTTGGAG+AGG 0.563345 3_3:-84547443 Msa0479540:CDS
CAACCTAGCGATCTTGTCAC+AGG 0.566337 3_3:-84547670 Msa0479540:CDS
GGATGTGAGTGGATCATACC+CGG 0.567159 3_3:+84547624 None:intergenic
CCATTGCAAAACCGACCAGT+AGG 0.568134 3_3:+84549701 None:intergenic
CTGTGACAAGATCGCTAGGT+TGG 0.568725 3_3:+84547671 None:intergenic
CTTTAAGAAATTGGAAGCAG+AGG 0.569727 3_3:+84547285 None:intergenic
ATAACATGAAAACATATGCT+AGG 0.572340 3_3:-84549766 Msa0479540:CDS
TATGAAGAAACAAATCATCA+AGG 0.572831 3_3:+84549913 None:intergenic
AACCACAAGGAAAACACTGT+TGG 0.579910 3_3:+84547399 None:intergenic
ACCATGAGGTCAGTGTAAGA+AGG 0.580211 3_3:+84547310 None:intergenic
CTAAAAGGAATTGTTGGAGA+GGG 0.582554 3_3:-84547442 Msa0479540:CDS
TAAACAACTTAATTACATGT+AGG 0.585322 3_3:-84544684 Msa0479540:three_prime_UTR
AAATATATCAACTTGGTGCA+AGG 0.585473 3_3:-84546408 Msa0479540:CDS
GTGTGTGCCATTTCAGAGAA+CGG 0.586756 3_3:-84546353 Msa0479540:CDS
CATTGCAAAACCGACCAGTA+GGG 0.588059 3_3:+84549702 None:intergenic
GGTGTTTGCTTTGCATCCGG+TGG 0.595182 3_3:-84547649 Msa0479540:CDS
GCTGGAAATGAAACATTTGG+TGG 0.595734 3_3:+84549836 None:intergenic
TAAAAGGAAATATATCAACT+TGG 0.596885 3_3:-84546415 Msa0479540:intron
CCATATGGGAAAGATTTCAA+AGG 0.612170 3_3:-84549731 Msa0479540:CDS
TTTAGGATGATGTCAAGAAG+AGG 0.615681 3_3:+84546190 None:intergenic
ACACCTGTGACAAGATCGCT+AGG 0.618279 3_3:+84547667 None:intergenic
GAACTTGCCCAATACAAGGA+TGG 0.620200 3_3:-84546233 Msa0479540:CDS
TATGGGAAAGATTTCAAAGG+AGG 0.625453 3_3:-84549728 Msa0479540:CDS
GGTTATAAAGTCGTTGACAA+AGG 0.626516 3_3:-84544898 Msa0479540:CDS
AGTCCCTAACATCTTCACAT+TGG 0.627021 3_3:+84544821 None:intergenic
GATTTGTTCAAAGAATACAT+AGG 0.628210 3_3:-84547469 Msa0479540:CDS
GTCGTTGACAAAGGATGTTG+TGG 0.629184 3_3:-84544889 Msa0479540:CDS
AAGGAGGCATCCCTACTGGT+CGG 0.630598 3_3:-84549712 Msa0479540:CDS
CGTTACTTCCTTGAACCACA+AGG 0.633044 3_3:+84547386 None:intergenic
TTGCTGTAAACACTCTCCGA+GGG 0.639385 3_3:+84544775 None:intergenic
ATATTTGGATCCAAATACGC+CGG 0.648403 3_3:+84547694 None:intergenic
CTTGCTGTAAACACTCTCCG+AGG 0.660448 3_3:+84544774 None:intergenic
TATATCAACTTGGTGCAAGG+AGG 0.682785 3_3:-84546405 Msa0479540:CDS
TGGAAGCAGAGGCGACCATG+AGG 0.684097 3_3:+84547296 None:intergenic
TCCACTCACATCCAAAACTG+CGG 0.722558 3_3:-84547614 Msa0479540:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATATATTATTA+TGG + chr3_3:84540870-84540889 None:intergenic 0.0%
!!! TATAATATTTTGAATTTTTC+TGG + chr3_3:84540515-84540534 None:intergenic 10.0%
!!! AAAAAATTCTGAATTTTTTT+TGG + chr3_3:84540547-84540566 None:intergenic 10.0%
!!! ATGAATTTTTATATGTTTTA+AGG - chr3_3:84540586-84540605 Msa0479540:intron 10.0%
!! AAAAAATATATTATTATGGT+TGG + chr3_3:84540866-84540885 None:intergenic 10.0%
!!! AAAAAAAAAGTATAAATGAA+AGG + chr3_3:84542389-84542408 None:intergenic 10.0%
!!! ATAATTTTTAAAAACTTCAT+AGG - chr3_3:84542454-84542473 Msa0479540:intron 10.0%
!! ATTTCAAATTTATTATTCTT+AGG - chr3_3:84542888-84542907 Msa0479540:intron 10.0%
!!! TTTTTATTATTTTTTTGATC+AGG - chr3_3:84542928-84542947 Msa0479540:intron 10.0%
!!! TTTTATTATTTTTTTGATCA+GGG - chr3_3:84542929-84542948 Msa0479540:intron 10.0%
!!! TTTTATTAGCAATTTTTTTT+TGG - chr3_3:84543427-84543446 Msa0479540:intron 10.0%
!! AAATACTCTTAAAAAATAAA+TGG - chr3_3:84543888-84543907 Msa0479540:intron 10.0%
!!! ATATTTTTCTGTAAAATTTA+AGG - chr3_3:84544292-84544311 Msa0479540:intron 10.0%
!!! AAAACTCTTTTTTATAATTT+TGG + chr3_3:84545167-84545186 None:intergenic 10.0%
!!! ATTTTTTTTTAAGAAATCAT+CGG + chr3_3:84546514-84546533 None:intergenic 10.0%
!!! GTATTATTGTATTTTTATAT+AGG + chr3_3:84547118-84547137 None:intergenic 10.0%
!!! AAACATTGATTTTTTTTTTA+TGG - chr3_3:84547891-84547910 Msa0479540:intron 10.0%
!! AGAAAGAAAATAAAAATATT+TGG - chr3_3:84548337-84548356 Msa0479540:intron 10.0%
!! AAAAAGGTAATAAAATTAAA+TGG - chr3_3:84548465-84548484 Msa0479540:intron 10.0%
!! TTTAAAAAAATTAAATGGAA+CGG - chr3_3:84548494-84548513 Msa0479540:intron 10.0%
!! TTGAAAATAGTTAAAAAAAT+CGG - chr3_3:84548916-84548935 Msa0479540:intron 10.0%
!! ATAATTAAAAAAAATTAGTG+AGG - chr3_3:84549635-84549654 Msa0479540:intron 10.0%
!! TAATTAAAAAAAATTAGTGA+GGG - chr3_3:84549636-84549655 Msa0479540:intron 10.0%
!!! ATTTGTTTCTTCATATTATT+GGG - chr3_3:84539653-84539672 Msa0479540:three_prime_UTR 15.0%
!!! TGCTAATATATATTTTTTGA+AGG - chr3_3:84540278-84540297 Msa0479540:intron 15.0%
!!! GCTAATATATATTTTTTGAA+GGG - chr3_3:84540279-84540298 Msa0479540:intron 15.0%
!!! TGAAGATTGAAAATTTTATA+GGG + chr3_3:84540431-84540450 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr3_3:84540745-84540764 Msa0479540:intron 15.0%
!! AAAAAGTTGACATATTTATA+GGG - chr3_3:84540805-84540824 Msa0479540:intron 15.0%
!! TATTTAACCCTAAAAATAAT+AGG - chr3_3:84540838-84540857 Msa0479540:intron 15.0%
!! AATAAATTTGCATAGATAAA+AGG + chr3_3:84541147-84541166 None:intergenic 15.0%
!!! TTGGTCAAAAATTTTAATAT+TGG + chr3_3:84542527-84542546 None:intergenic 15.0%
!! AAAAAGTTAAAAAATGATAG+AGG - chr3_3:84542759-84542778 Msa0479540:intron 15.0%
!! AAAAGTTAAAAAATGATAGA+GGG - chr3_3:84542760-84542779 Msa0479540:intron 15.0%
!!! ATTTTGAAAAGAAAAAAGTA+TGG - chr3_3:84542824-84542843 Msa0479540:intron 15.0%
!!! TTTTGAAAAGAAAAAAGTAT+GGG - chr3_3:84542825-84542844 Msa0479540:intron 15.0%
!! TAAGATTCATATATTTGATA+AGG - chr3_3:84542855-84542874 Msa0479540:intron 15.0%
!!! TTTAGAGAATTTAAAATGAA+GGG + chr3_3:84543002-84543021 None:intergenic 15.0%
!!! TTTTAGAGAATTTAAAATGA+AGG + chr3_3:84543003-84543022 None:intergenic 15.0%
!!! CTAAAGTCTTTTTAAAATTA+AGG + chr3_3:84543599-84543618 None:intergenic 15.0%
!! AGTAGTGTAAATATTATATA+TGG - chr3_3:84543737-84543756 Msa0479540:intron 15.0%
!!! TTTAAGAGTATTTTAATAAG+TGG + chr3_3:84543881-84543900 None:intergenic 15.0%
!! AAATACTCATTTAAAAATAG+AGG - chr3_3:84544026-84544045 Msa0479540:intron 15.0%
!!! TCAATTTTAAACAACTTTTT+AGG - chr3_3:84544065-84544084 Msa0479540:intron 15.0%
!!! CAATTTTAAACAACTTTTTA+GGG - chr3_3:84544066-84544085 Msa0479540:intron 15.0%
!! TTTACAGAAAAATATATTTG+TGG + chr3_3:84544287-84544306 None:intergenic 15.0%
!!! AGAAAATATTTGTTTTCATT+AGG - chr3_3:84544544-84544563 Msa0479540:intron 15.0%
!! ATTCATCATAAAATATGTAT+GGG - chr3_3:84545036-84545055 Msa0479540:intron 15.0%
!! TAGAAATTGACATAATATTT+AGG - chr3_3:84545093-84545112 Msa0479540:intron 15.0%
!!! TTTGCATTATTTTTTATTTC+AGG + chr3_3:84545831-84545850 None:intergenic 15.0%
!! AAGTTTATAAATTCAGAAAT+TGG - chr3_3:84545921-84545940 Msa0479540:intron 15.0%
!!! ACCAATTGTTTTATATATTT+GGG - chr3_3:84546217-84546236 Msa0479540:CDS 15.0%
!!! TTTTTTTTTAAGAAATCATC+GGG + chr3_3:84546513-84546532 None:intergenic 15.0%
!!! AATTTATTTATGTGTTTTCT+CGG + chr3_3:84546560-84546579 None:intergenic 15.0%
!!! TTTTTTTTTTCAATTGTTAG+TGG + chr3_3:84547517-84547536 None:intergenic 15.0%
!! TCAAAACAAAGTTAAAATAA+AGG - chr3_3:84547775-84547794 Msa0479540:intron 15.0%
!!! CTAATGCATATAATTTTTTT+TGG + chr3_3:84548240-84548259 None:intergenic 15.0%
!!! ACCTCTTTAAAAAAATTAAA+TGG - chr3_3:84548489-84548508 Msa0479540:intron 15.0%
!!! TCCATTTAATTTTTTTAAAG+AGG + chr3_3:84548493-84548512 None:intergenic 15.0%
!! GGTTCAAAAAAAAAATTAAA+TGG - chr3_3:84548515-84548534 Msa0479540:intron 15.0%
!!! TTTTAATGCATAAAATTGAA+TGG + chr3_3:84548683-84548702 None:intergenic 15.0%
!!! TAATTTTTTTTAGTATTGCT+TGG + chr3_3:84548957-84548976 None:intergenic 15.0%
!! AGAAAGGAAATAAAAATATT+TGG - chr3_3:84549064-84549083 Msa0479540:intron 15.0%
!!! TTCAAAAAAATACGTTTTTT+TGG - chr3_3:84549435-84549454 Msa0479540:intron 15.0%
!! AATTAAAAAAAATTAGTGAG+GGG - chr3_3:84549637-84549656 Msa0479540:intron 15.0%
!! TTTAATATATAGTAAGTAGA+TGG - chr3_3:84549776-84549795 Msa0479540:CDS 15.0%
!!! AAAAATGATTTTGTGTTTTA+AGG - chr3_3:84549861-84549880 Msa0479540:CDS 15.0%
!!! AAAATGATTTTGTGTTTTAA+GGG - chr3_3:84549862-84549881 Msa0479540:CDS 15.0%
!!! GATTTGTTTCTTCATATTAT+TGG - chr3_3:84539652-84539671 Msa0479540:three_prime_UTR 20.0%
!!! CAGAGACATTTTATTTAAAA+TGG - chr3_3:84540086-84540105 Msa0479540:intron 20.0%
!!! GATTTTTGCTAATGTATAAA+AGG - chr3_3:84540301-84540320 Msa0479540:intron 20.0%
!!! ATAAGGGTTAAATATGTTTT+TGG - chr3_3:84540344-84540363 Msa0479540:intron 20.0%
!! GAAAAGTTGACATATTTATA+TGG + chr3_3:84540371-84540390 None:intergenic 20.0%
!!! GTGAAGATTGAAAATTTTAT+AGG + chr3_3:84540432-84540451 None:intergenic 20.0%
!!! AAATTTTCAATCTTCACTTT+TGG - chr3_3:84540435-84540454 Msa0479540:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr3_3:84540462-84540481 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr3_3:84540463-84540482 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr3_3:84540741-84540760 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr3_3:84540744-84540763 Msa0479540:intron 20.0%
!! CAAAAAGTTGACATATTTAT+AGG - chr3_3:84540804-84540823 Msa0479540:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG + chr3_3:84540832-84540851 None:intergenic 20.0%
!! TCTTTCATAAATTAGAATGT+AGG - chr3_3:84541182-84541201 Msa0479540:intron 20.0%
!! ACTATTAATTAAAATCTAGC+TGG - chr3_3:84541264-84541283 Msa0479540:intron 20.0%
!!! ATAATTTTGAGACAATTTTG+TGG + chr3_3:84541519-84541538 None:intergenic 20.0%
!! TCATTTACTAAGTTTACTAT+TGG + chr3_3:84541599-84541618 None:intergenic 20.0%
!!! TTTAAAAACTTCATAGGTTT+TGG - chr3_3:84542460-84542479 Msa0479540:intron 20.0%
!!! TTAAAAACTTCATAGGTTTT+GGG - chr3_3:84542461-84542480 Msa0479540:intron 20.0%
!!! AAAATTTTTGACCAACTAAA+AGG - chr3_3:84542532-84542551 Msa0479540:intron 20.0%
!!! AAATTTTTGACCAACTAAAA+GGG - chr3_3:84542533-84542552 Msa0479540:intron 20.0%
!! ATAAATGTGAATATCTCTTT+CGG + chr3_3:84542619-84542638 None:intergenic 20.0%
!! TCAAATTTATTATTCTTAGG+CGG - chr3_3:84542891-84542910 Msa0479540:intron 20.0%
!!! TAAAATGAAGGGATTTTATA+AGG + chr3_3:84542991-84543010 None:intergenic 20.0%
!! TTTCTCTGAATTCTATTAAA+AGG - chr3_3:84543127-84543146 Msa0479540:intron 20.0%
!! TAAAAGGAAATATATCAACT+TGG - chr3_3:84543143-84543162 Msa0479540:intron 20.0%
!! ATTCAACACTAAATTATCAA+AGG - chr3_3:84543283-84543302 Msa0479540:intron 20.0%
!! ATCCTAAATTACCAAAATTA+TGG - chr3_3:84543383-84543402 Msa0479540:intron 20.0%
!!! TACCATAATTTTGGTAATTT+AGG + chr3_3:84543388-84543407 None:intergenic 20.0%
!! ATGACTTTATGTTATATTAG+TGG + chr3_3:84543663-84543682 None:intergenic 20.0%
!!! AGTTTTATAGAAATTGTCAT+TGG + chr3_3:84543697-84543716 None:intergenic 20.0%
!!! CTCTTTTTTTTTTTTTTGAG+AGG - chr3_3:84543824-84543843 Msa0479540:intron 20.0%
!! TCACAAAAGTTGTTAAAAAT+TGG - chr3_3:84544185-84544204 Msa0479540:intron 20.0%
!! ATTCCTCTTAAAAATATAAG+TGG - chr3_3:84544221-84544240 Msa0479540:intron 20.0%
!! TTCCTCTTAAAAATATAAGT+GGG - chr3_3:84544222-84544241 Msa0479540:intron 20.0%
!!! ATCACGTAAATTTGAAATTA+TGG - chr3_3:84544359-84544378 Msa0479540:intron 20.0%
!!! AATTTGTTTTGCTTGTATAA+TGG - chr3_3:84544635-84544654 Msa0479540:three_prime_UTR 20.0%
!! TAAACAACTTAATTACATGT+AGG - chr3_3:84544874-84544893 Msa0479540:CDS 20.0%
!! GATTCATCATAAAATATGTA+TGG - chr3_3:84545035-84545054 Msa0479540:intron 20.0%
!!! ATATTTAGGATGAAAACAAT+TGG - chr3_3:84545107-84545126 Msa0479540:intron 20.0%
!! AATTAAGAAAAATACTTAGG+CGG + chr3_3:84545450-84545469 None:intergenic 20.0%
!! GCAAATTAAGAAAAATACTT+AGG + chr3_3:84545453-84545472 None:intergenic 20.0%
!! AAGAAACTGACATAATATTT+AGG + chr3_3:84545653-84545672 None:intergenic 20.0%
!! TGAATTTATAAACTTAGTCA+AGG + chr3_3:84545916-84545935 None:intergenic 20.0%
!! AATATATAAAACAATTGGTC+AGG + chr3_3:84546216-84546235 None:intergenic 20.0%
!!! GACCAATTGTTTTATATATT+TGG - chr3_3:84546216-84546235 Msa0479540:CDS 20.0%
!! ACCCAAATATATAAAACAAT+TGG + chr3_3:84546221-84546240 None:intergenic 20.0%
!!! ATATTTTTTGGTTTCTTTCT+CGG + chr3_3:84546865-84546884 None:intergenic 20.0%
!! GTAACATTGATAAATCATAA+AGG - chr3_3:84546911-84546930 Msa0479540:intron 20.0%
!! AAAAATCTTCCTTTGTTAAA+TGG + chr3_3:84547457-84547476 None:intergenic 20.0%
!!! ATTTTTTTTTTATGGTGTCT+GGG - chr3_3:84547899-84547918 Msa0479540:intron 20.0%
!! CGTGAATAAAAATATTTGTA+TGG - chr3_3:84549103-84549122 Msa0479540:intron 20.0%
!! AACCTCCTTAAAAAATTAAA+TGG - chr3_3:84549216-84549235 Msa0479540:intron 20.0%
!!! TTCCATTTAATTTTTTAAGG+AGG + chr3_3:84549221-84549240 None:intergenic 20.0%
!! CCTTAAAAAATTAAATGGAA+CGG - chr3_3:84549221-84549240 Msa0479540:intron 20.0%
!! TTTGAATGCATAAAATTGAA+TGG + chr3_3:84549421-84549440 None:intergenic 20.0%
!!! TACATTTTTAAGGAGAAATT+AGG + chr3_3:84549488-84549507 None:intergenic 20.0%
!! TTTCGTAATTTCATAATTAG+TGG + chr3_3:84549712-84549731 None:intergenic 20.0%
!!! AAATGATTTTGTGTTTTAAG+GGG - chr3_3:84549863-84549882 Msa0479540:CDS 20.0%
! TATGAAGAAACAAATCATCA+AGG + chr3_3:84539648-84539667 None:intergenic 25.0%
!!! AGTTATTTCTTACACAACTA+AGG - chr3_3:84539676-84539695 Msa0479540:three_prime_UTR 25.0%
! ATAACATGAAAACATATGCT+AGG - chr3_3:84539792-84539811 Msa0479540:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr3_3:84540774-84540793 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr3_3:84540773-84540792 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr3_3:84540773-84540792 Msa0479540:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr3_3:84540774-84540793 Msa0479540:intron 25.0%
!!! AAATTTTTTAGGTTCATCCA+TGG + chr3_3:84541049-84541068 None:intergenic 25.0%
! CCTAAAAAATTTACTAGATC+CGG - chr3_3:84541057-84541076 Msa0479540:intron 25.0%
! TTCATAAATTAGAATGTAGG+AGG - chr3_3:84541185-84541204 Msa0479540:intron 25.0%
! AATGAAATAGGAGTTTGAAA+AGG - chr3_3:84541293-84541312 Msa0479540:intron 25.0%
!! AATTTTGTGGATCCATTATT+TGG + chr3_3:84541506-84541525 None:intergenic 25.0%
! AAAGACAAGTTATAAACCAT+GGG - chr3_3:84541633-84541652 Msa0479540:intron 25.0%
!! CAATTTACTTCCTTTTCTAT+TGG - chr3_3:84541799-84541818 Msa0479540:intron 25.0%
! ATATATCACACCAATAGAAA+AGG + chr3_3:84541812-84541831 None:intergenic 25.0%
! TTTCTTATTCCTTTCTAACT+TGG - chr3_3:84542025-84542044 Msa0479540:intron 25.0%
! TTTGAACAAATCTATTTGAC+CGG + chr3_3:84542081-84542100 None:intergenic 25.0%
!! GATTTGTTCAAAGAATACAT+AGG - chr3_3:84542089-84542108 Msa0479540:intron 25.0%
! ATGGCTCAAAAAATATGTAT+TGG + chr3_3:84542204-84542223 None:intergenic 25.0%
!! GCTGAACTTTTAAATTCTTT+AGG + chr3_3:84542343-84542362 None:intergenic 25.0%
! AGTAATTGCTTATTTAACGT+TGG - chr3_3:84542428-84542447 Msa0479540:intron 25.0%
! GTAATTGCTTATTTAACGTT+GGG - chr3_3:84542429-84542448 Msa0479540:intron 25.0%
!! TAAAAACTTCATAGGTTTTG+GGG - chr3_3:84542462-84542481 Msa0479540:intron 25.0%
!!! ACTTTTTTTTTGTCTTCCAT+AGG + chr3_3:84542679-84542698 None:intergenic 25.0%
! TATGGAAGACAAAAAAAAAG+TGG - chr3_3:84542678-84542697 Msa0479540:intron 25.0%
! ATGGAAGACAAAAAAAAAGT+GGG - chr3_3:84542679-84542698 Msa0479540:intron 25.0%
!! GGTTATACATACCATAATTT+TGG + chr3_3:84543397-84543416 None:intergenic 25.0%
!! TTGCTAATAAAAAGAAGTGT+CGG + chr3_3:84543419-84543438 None:intergenic 25.0%
! ACTTTATGTTATATTAGTGG+CGG + chr3_3:84543660-84543679 None:intergenic 25.0%
! CATGCTTTCATAAAAATTAG+TGG + chr3_3:84543779-84543798 None:intergenic 25.0%
!!! AAAAAAAAAAGAGCACTCTA+AGG + chr3_3:84543817-84543836 None:intergenic 25.0%
!! TTGTTATTGTCCAATAAGAA+TGG + chr3_3:84544106-84544125 None:intergenic 25.0%
! ATAACAATAGAGAGAGAAAA+AGG - chr3_3:84544119-84544138 Msa0479540:intron 25.0%
!!! CATGCAAATACTTTTTAACA+TGG + chr3_3:84544585-84544604 None:intergenic 25.0%
!! TGTATATATTTTCGAAGAAG+AGG + chr3_3:84544819-84544838 None:intergenic 25.0%
! AATCATAATTCACACATCAT+TGG + chr3_3:84545135-84545154 None:intergenic 25.0%
! ATGAACACCAAATCTTTATT+TGG - chr3_3:84545322-84545341 Msa0479540:intron 25.0%
!! TGAACACCAAATCTTTATTT+GGG - chr3_3:84545323-84545342 Msa0479540:intron 25.0%
!! TTTTGAACGTGCATATTTTT+AGG - chr3_3:84545351-84545370 Msa0479540:intron 25.0%
! ATATCAAGGACATTTCTAAA+AGG + chr3_3:84545552-84545571 None:intergenic 25.0%
!! AGTTTAAGACTTAGTAAGTT+TGG + chr3_3:84546152-84546171 None:intergenic 25.0%
!! TATAGTTGATGTAACACTAT+GGG + chr3_3:84546319-84546338 None:intergenic 25.0%
!! ATATAGTTGATGTAACACTA+TGG + chr3_3:84546320-84546339 None:intergenic 25.0%
! ACATTGTGTTGAAAGATAAA+AGG + chr3_3:84546432-84546451 None:intergenic 25.0%
!! TTCAAAACTGACGTTTTATA+TGG + chr3_3:84546599-84546618 None:intergenic 25.0%
! TCATTTAAGGAAATTCAAGA+TGG + chr3_3:84546626-84546645 None:intergenic 25.0%
!! ATTTCGCTTTAAGTCATTTA+AGG + chr3_3:84546639-84546658 None:intergenic 25.0%
!!! TTTAAGTTTGTTTTTGGTTC+TGG + chr3_3:84546710-84546729 None:intergenic 25.0%
! AGAACCAAAAACAAACTTAA+AGG - chr3_3:84546709-84546728 Msa0479540:intron 25.0%
! GAACCAAAAACAAACTTAAA+GGG - chr3_3:84546710-84546729 Msa0479540:intron 25.0%
!!! AATCCCTTTAAGTTTGTTTT+TGG + chr3_3:84546716-84546735 None:intergenic 25.0%
! AATAACTCGATATAGAGAAT+TGG + chr3_3:84546819-84546838 None:intergenic 25.0%
!! AAATTTGTGCATTTAAGATC+AGG + chr3_3:84547229-84547248 None:intergenic 25.0%
!!! ACAATTGTTATTTTAGCTTC+TGG + chr3_3:84547382-84547401 None:intergenic 25.0%
! TACTATACTCCATTTAACAA+AGG - chr3_3:84547445-84547464 Msa0479540:CDS 25.0%
!!! TTTAGTTTTTGCTTCATCAT+AGG + chr3_3:84547578-84547597 None:intergenic 25.0%
!!! TCATTTTCTTCCTTTTTTCA+TGG + chr3_3:84547669-84547688 None:intergenic 25.0%
!! TTCATTTTCTTCTTCATAAG+AGG + chr3_3:84547692-84547711 None:intergenic 25.0%
!! AACTTTAGCTTCTTTCTTAA+AGG + chr3_3:84547801-84547820 None:intergenic 25.0%
!!! GATTTTTTTTTTATGGTGTC+TGG - chr3_3:84547898-84547917 Msa0479540:intron 25.0%
!!! TTTTTTTTTTATGGTGTCTG+GGG - chr3_3:84547900-84547919 Msa0479540:intron 25.0%
!! AGATGTCTTTTCTTCAAAAA+AGG + chr3_3:84548157-84548176 None:intergenic 25.0%
! CGTGAATAAAAATATTTGTG+AGG - chr3_3:84548376-84548395 Msa0479540:intron 25.0%
!! AAGTAACATTCAACAACTTT+TGG - chr3_3:84548645-84548664 Msa0479540:intron 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG + chr3_3:84548749-84548768 None:intergenic 25.0%
!! TCAACTTCTCTACATTTTTA+AGG + chr3_3:84548759-84548778 None:intergenic 25.0%
! GAGAAGTTGAAAAAAAAAAC+CGG - chr3_3:84548769-84548788 Msa0479540:intron 25.0%
! AGAAGTTGAAAAAAAAAACC+GGG - chr3_3:84548770-84548789 Msa0479540:intron 25.0%
! AATAGTTAAAAAAATCGGTG+AGG - chr3_3:84548921-84548940 Msa0479540:intron 25.0%
!!! CCGTTCCATTTAATTTTTTA+AGG + chr3_3:84549224-84549243 None:intergenic 25.0%
!! AAGTAACATTCAACAACTTT+TGG - chr3_3:84548645-84548664 Msa0479540:intron 25.0%
! ATTTCATAATTAGTGGAACT+TGG + chr3_3:84549705-84549724 None:intergenic 25.0%
AAAGTTCCATCAGACTATAT+AGG - chr3_3:84539881-84539900 Msa0479540:intron 30.0%
TATGTACCTATATAGTCTGA+TGG + chr3_3:84539890-84539909 None:intergenic 30.0%
GTTCTACACGAAGATAATTA+AGG + chr3_3:84539916-84539935 None:intergenic 30.0%
ATGTGTTGAAGATGTATAAG+TGG + chr3_3:84539938-84539957 None:intergenic 30.0%
CTTATACATCTTCAACACAT+TGG - chr3_3:84539938-84539957 Msa0479540:intron 30.0%
TGATATTGCAACTGAAATTG+TGG + chr3_3:84540063-84540082 None:intergenic 30.0%
TAGAAAAAACCATCTAAGAG+TGG - chr3_3:84540196-84540215 Msa0479540:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr3_3:84540760-84540779 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr3_3:84540760-84540779 Msa0479540:intron 30.0%
!!! GTTGGTGCCTATTATTTTTA+GGG + chr3_3:84540848-84540867 None:intergenic 30.0%
!!! CCGGATCTAGTAAATTTTTT+AGG + chr3_3:84541060-84541079 None:intergenic 30.0%
! CTCTCTCTTGACATATTTTA+TGG + chr3_3:84541226-84541245 None:intergenic 30.0%
! AAGGTATTAGAACTTGAACA+AGG - chr3_3:84541312-84541331 Msa0479540:intron 30.0%
!!! GTTGAGTTTTGATTTTTGAG+TGG - chr3_3:84541376-84541395 Msa0479540:intron 30.0%
!!! AGTTGTTTTTTCCCAACAAA+TGG - chr3_3:84541408-84541427 Msa0479540:intron 30.0%
TTATTTGGAAGCTCGTAATA+TGG + chr3_3:84541491-84541510 None:intergenic 30.0%
TATTACGAGCTTCCAAATAA+TGG - chr3_3:84541491-84541510 Msa0479540:intron 30.0%
CACATTGAAGCAATAAAAAG+TGG + chr3_3:84541551-84541570 None:intergenic 30.0%
TACTAAGTTTACTATTGGAG+TGG + chr3_3:84541594-84541613 None:intergenic 30.0%
! CATGGTTTATAACTTGTCTT+TGG + chr3_3:84541634-84541653 None:intergenic 30.0%
CAAAGACAAGTTATAAACCA+TGG - chr3_3:84541632-84541651 Msa0479540:intron 30.0%
TGATATATCAGTTGAAGCAT+TGG - chr3_3:84541824-84541843 Msa0479540:intron 30.0%
! GATATATCAGTTGAAGCATT+GGG - chr3_3:84541825-84541844 Msa0479540:intron 30.0%
TAATAGTGACCAAGTTAGAA+AGG + chr3_3:84542037-84542056 None:intergenic 30.0%
GAATACATAGGAAAGCTAAA+AGG - chr3_3:84542101-84542120 Msa0479540:intron 30.0%
! CATATTGTAGTTCTCTAAGA+TGG + chr3_3:84542223-84542242 None:intergenic 30.0%
! GGAGTATACCTTTAAGAAAT+TGG + chr3_3:84542285-84542304 None:intergenic 30.0%
AAGGTATACTCCTAATAACA+TGG - chr3_3:84542293-84542312 Msa0479540:intron 30.0%
CATTGAAACACCATGTTATT+AGG + chr3_3:84542306-84542325 None:intergenic 30.0%
!! AACATTGATTCACCGTATTA+TGG + chr3_3:84542586-84542605 None:intergenic 30.0%
ATATTTGAATTACCTCATCC+AGG - chr3_3:84543045-84543064 Msa0479540:intron 30.0%
!! AAATATATCAACTTGGTGCA+AGG - chr3_3:84543150-84543169 Msa0479540:intron 30.0%
TATTAAGTGTTCCACCAATT+GGG - chr3_3:84543183-84543202 Msa0479540:intron 30.0%
CACTAAATTATCAAAGGAGT+TGG - chr3_3:84543289-84543308 Msa0479540:intron 30.0%
!! TGCTAATAAAAAGAAGTGTC+GGG + chr3_3:84543418-84543437 None:intergenic 30.0%
TAAAAGTAAGTGAGTGTAAG+TGG + chr3_3:84543940-84543959 None:intergenic 30.0%
TTATTGTCCAATAAGAATGG+AGG + chr3_3:84544103-84544122 None:intergenic 30.0%
AAAAGGAAGAGAGAGAATAA+AGG - chr3_3:84544136-84544155 Msa0479540:intron 30.0%
!! CACCCACTTATATTTTTAAG+AGG + chr3_3:84544227-84544246 None:intergenic 30.0%
TATCCAATGTGAAGATGTTA+GGG - chr3_3:84544734-84544753 Msa0479540:CDS 30.0%
CAAAAAGAAACTAGAAGAAC+TGG + chr3_3:84544842-84544861 None:intergenic 30.0%
!!! CAGTTCTTCTAGTTTCTTTT+TGG - chr3_3:84544840-84544859 Msa0479540:CDS 30.0%
AAGAAGAGATGTTAAAACGA+TGG - chr3_3:84545004-84545023 Msa0479540:intron 30.0%
TGTTAGAGAGTTACCAAAAA+AGG - chr3_3:84545189-84545208 Msa0479540:intron 30.0%
!!! TATGAGTACCAATCCTTTTT+TGG + chr3_3:84545205-84545224 None:intergenic 30.0%
ATCGTTCCCAAATAAAGATT+TGG + chr3_3:84545332-84545351 None:intergenic 30.0%
AATGTCCTTGATATCTCATT+TGG - chr3_3:84545558-84545577 Msa0479540:intron 30.0%
ATGTCCTTGATATCTCATTT+GGG - chr3_3:84545559-84545578 Msa0479540:intron 30.0%
GATTGATGTCTTCAAACATT+TGG - chr3_3:84545712-84545731 Msa0479540:intron 30.0%
AAATTCAATCCTAACCAGTT+TGG + chr3_3:84545758-84545777 None:intergenic 30.0%
TATGAGCTTGATAAGTGTTA+AGG - chr3_3:84546033-84546052 Msa0479540:intron 30.0%
! GGTTGTCATTGACTATAAAA+TGG - chr3_3:84546238-84546257 Msa0479540:CDS 30.0%
AAGAACTCAAGGTAAATAGA+TGG - chr3_3:84546266-84546285 Msa0479540:CDS 30.0%
GACATTTGGAAAATAGGATT+TGG + chr3_3:84547043-84547062 None:intergenic 30.0%
GATTTGGACATTTGGAAAAT+AGG + chr3_3:84547049-84547068 None:intergenic 30.0%
! TCAAAAACGATTTGGACATT+TGG + chr3_3:84547057-84547076 None:intergenic 30.0%
TAAGGATCTCAAAAACGATT+TGG + chr3_3:84547065-84547084 None:intergenic 30.0%
AAGGGATTATGACTACATTA+AGG + chr3_3:84547083-84547102 None:intergenic 30.0%
TATAGGACTTTCAATGTCAA+GGG + chr3_3:84547101-84547120 None:intergenic 30.0%
ATATAGGACTTTCAATGTCA+AGG + chr3_3:84547102-84547121 None:intergenic 30.0%
TCGATATCAGAATGAACAAA+GGG + chr3_3:84547157-84547176 None:intergenic 30.0%
TTCGATATCAGAATGAACAA+AGG + chr3_3:84547158-84547177 None:intergenic 30.0%
TTTCTGTATCATCAACTTTC+TGG - chr3_3:84547246-84547265 Msa0479540:intron 30.0%
TTTCTGGATCTCAATGATAT+AGG - chr3_3:84547262-84547281 Msa0479540:intron 30.0%
! ACTGTAACGGTTTTCATATT+TGG + chr3_3:84547298-84547317 None:intergenic 30.0%
! ATGAAAACCGTTACAGTTTT+AGG - chr3_3:84547301-84547320 Msa0479540:CDS 30.0%
GAGTAATCCTAAAACTGTAA+CGG + chr3_3:84547311-84547330 None:intergenic 30.0%
!!! TTGAATTTTAGCTCATGGTA+AGG + chr3_3:84547412-84547431 None:intergenic 30.0%
!!! GATGATTGAATTTTAGCTCA+TGG + chr3_3:84547417-84547436 None:intergenic 30.0%
TGTTAAATGGAGTATAGTAG+AGG + chr3_3:84547444-84547463 None:intergenic 30.0%
!! ACTGATTTTTATGACTTGAG+TGG + chr3_3:84547619-84547638 None:intergenic 30.0%
! TTTTAGACCGTAAAAAACCT+TGG + chr3_3:84547749-84547768 None:intergenic 30.0%
AGAAAGAAGCTAAAGTTGTT+TGG - chr3_3:84547804-84547823 Msa0479540:intron 30.0%
AAAAAAAAAACCGGGTCAAA+CGG - chr3_3:84548778-84548797 Msa0479540:intron 30.0%
GTAACAAAAAAACAGACAGA+CGG - chr3_3:84548988-84549007 Msa0479540:intron 30.0%
ATATTTGTGAGGTTGAAGAA+AGG - chr3_3:84549048-84549067 Msa0479540:intron 30.0%
AAATTGAATGGAATGAGCTT+TGG + chr3_3:84549409-84549428 None:intergenic 30.0%
TACTTAATTGATGCTGTGTT+TGG - chr3_3:84549462-84549481 Msa0479540:intron 30.0%
! CCAACTACTCTACATTTTTA+AGG + chr3_3:84549498-84549517 None:intergenic 30.0%
CCTTAAAAATGTAGAGTAGT+TGG - chr3_3:84549495-84549514 Msa0479540:intron 30.0%
TAGAGTAGTTGGAAAAAAGT+CGG - chr3_3:84549506-84549525 Msa0479540:intron 30.0%
AATGTAGAAGCAACTGAATT+TGG - chr3_3:84549560-84549579 Msa0479540:intron 30.0%
ATGTAGAAGCAACTGAATTT+GGG - chr3_3:84549561-84549580 Msa0479540:intron 30.0%
GGCAAAATGGTAAAATCATA+GGG - chr3_3:84549746-84549765 Msa0479540:CDS 30.0%
!! CATACTCTTTAGAATATCCT+AGG + chr3_3:84549802-84549821 None:intergenic 30.0%
! CTAGGATATTCTAAAGAGTA+TGG - chr3_3:84549800-84549819 Msa0479540:CDS 30.0%
! TTACACAACTAAGGCTAGTT+TGG - chr3_3:84539685-84539704 Msa0479540:three_prime_UTR 35.0%
ACTGCTGGAAATGAAACATT+TGG + chr3_3:84539728-84539747 None:intergenic 35.0%
TTTCCAGCAGTATTTGTGTT+TGG - chr3_3:84539737-84539756 Msa0479540:three_prime_UTR 35.0%
TGTGTTTGGAGATTCAATCA+TGG - chr3_3:84539751-84539770 Msa0479540:three_prime_UTR 35.0%
TGGAGATTCAATCATGGATA+CGG - chr3_3:84539757-84539776 Msa0479540:three_prime_UTR 35.0%
! AGGTGCAATTTTCTTCCATA+TGG - chr3_3:84539812-84539831 Msa0479540:intron 35.0%
! GGTGCAATTTTCTTCCATAT+GGG - chr3_3:84539813-84539832 Msa0479540:intron 35.0%
!! CCTTTGAAATCTTTCCCATA+TGG + chr3_3:84539830-84539849 None:intergenic 35.0%
CCATATGGGAAAGATTTCAA+AGG - chr3_3:84539827-84539846 Msa0479540:intron 35.0%
TATGGGAAAGATTTCAAAGG+AGG - chr3_3:84539830-84539849 Msa0479540:intron 35.0%
GGAGTATACTATTTGTGTCA+TGG - chr3_3:84539959-84539978 Msa0479540:intron 35.0%
TATAACTGTTTGCACCGTAA+GGG + chr3_3:84540004-84540023 None:intergenic 35.0%
ATATAACTGTTTGCACCGTA+AGG + chr3_3:84540005-84540024 None:intergenic 35.0%
ATTACCTCTCGATGAATTGA+GGG + chr3_3:84540175-84540194 None:intergenic 35.0%
!! GGTTGGTGCCTATTATTTTT+AGG + chr3_3:84540849-84540868 None:intergenic 35.0%
! AATACTTAGAGCATCTCCAA+TGG - chr3_3:84540888-84540907 Msa0479540:intron 35.0%
ATATTAGGTGCTCCCTATTT+GGG + chr3_3:84541007-84541026 None:intergenic 35.0%
!! AAATAGGGAGCACCTAATAT+GGG - chr3_3:84541007-84541026 Msa0479540:intron 35.0%
!! TTCAATTTGGTGCCCATATT+AGG + chr3_3:84541022-84541041 None:intergenic 35.0%
TAATATGGGCACCAAATTGA+AGG - chr3_3:84541021-84541040 Msa0479540:intron 35.0%
AATATGGGCACCAAATTGAA+GGG - chr3_3:84541022-84541041 Msa0479540:intron 35.0%
GAGTGTTTGAGAAAGATAAG+AGG + chr3_3:84541113-84541132 None:intergenic 35.0%
! AGCTGGTGTTGAAATGAAAT+AGG - chr3_3:84541281-84541300 Msa0479540:intron 35.0%
! TTTTCCCAACAAATGGTGAT+CGG - chr3_3:84541415-84541434 Msa0479540:intron 35.0%
TCACCCATGATCTTTCAATT+TGG - chr3_3:84541462-84541481 Msa0479540:intron 35.0%
CACCCATGATCTTTCAATTT+GGG - chr3_3:84541463-84541482 Msa0479540:intron 35.0%
ACCCATGATCTTTCAATTTG+GGG - chr3_3:84541464-84541483 Msa0479540:intron 35.0%
ACCCCAAATTGAAAGATCAT+GGG + chr3_3:84541468-84541487 None:intergenic 35.0%
! AGTGGCAAAAGCATATAGTT+AGG + chr3_3:84541576-84541595 None:intergenic 35.0%
ACAAGTTATAAACCATGGGA+CGG - chr3_3:84541637-84541656 Msa0479540:intron 35.0%
!! AGTTGAAGCATTGGGAATTA+AGG - chr3_3:84541833-84541852 Msa0479540:intron 35.0%
ATATTTGGATCCAAATACGC+CGG + chr3_3:84541867-84541886 None:intergenic 35.0%
GGAAAGCTAAAAGGAATTGT+TGG - chr3_3:84542110-84542129 Msa0479540:intron 35.0%
CTAAAAGGAATTGTTGGAGA+GGG - chr3_3:84542116-84542135 Msa0479540:intron 35.0%
! CTTTAAGAAATTGGAAGCAG+AGG + chr3_3:84542276-84542295 None:intergenic 35.0%
CTCTGCTTCCAATTTCTTAA+AGG - chr3_3:84542274-84542293 Msa0479540:intron 35.0%
! ATTGATTCACCGTATTATGG+AGG + chr3_3:84542583-84542602 None:intergenic 35.0%
CTCCTCAAAATTATCTACAG+TGG - chr3_3:84542648-84542667 Msa0479540:intron 35.0%
! CTCCACTGTAGATAATTTTG+AGG + chr3_3:84542653-84542672 None:intergenic 35.0%
CTCAAAATTATCTACAGTGG+AGG - chr3_3:84542651-84542670 Msa0479540:intron 35.0%
CTTACACATTCTTTAACTCC+TGG + chr3_3:84543066-84543085 None:intergenic 35.0%
GTATTAAGTGTTCCACCAAT+TGG - chr3_3:84543182-84543201 Msa0479540:intron 35.0%
AGGTAAACCATCCTTGTATT+GGG + chr3_3:84543335-84543354 None:intergenic 35.0%
AAGGTAAACCATCCTTGTAT+TGG + chr3_3:84543336-84543355 None:intergenic 35.0%
GAAGAGGATTGTAAACATCA+AGG + chr3_3:84543355-84543374 None:intergenic 35.0%
! TTTAGGATGATGTCAAGAAG+AGG + chr3_3:84543371-84543390 None:intergenic 35.0%
AAGTCGTTGAATACATCTTG+AGG + chr3_3:84543988-84544007 None:intergenic 35.0%
CCAATAAGAATGGAGGAAAA+AGG + chr3_3:84544096-84544115 None:intergenic 35.0%
! CCTTTTTCCTCCATTCTTAT+TGG - chr3_3:84544093-84544112 Msa0479540:intron 35.0%
! TGTTTTGCTTGTATAATGGC+AGG - chr3_3:84544639-84544658 Msa0479540:three_prime_UTR 35.0%
GGTTATAAAGTCGTTGACAA+AGG - chr3_3:84544660-84544679 Msa0479540:three_prime_UTR 35.0%
CTTCACATTGGATAGCAAAT+TGG + chr3_3:84544728-84544747 None:intergenic 35.0%
CTATCCAATGTGAAGATGTT+AGG - chr3_3:84544733-84544752 Msa0479540:CDS 35.0%
GAGAGTTACCAAAAAAGGAT+TGG - chr3_3:84545194-84545213 Msa0479540:intron 35.0%
GAGTGAAGATAATCTAGTCT+AGG - chr3_3:84545264-84545283 Msa0479540:intron 35.0%
! CTAGTCTAGGATTAGAGTTA+AGG - chr3_3:84545277-84545296 Msa0479540:intron 35.0%
!!! TGAACGTGCATATTTTTAGG+TGG - chr3_3:84545354-84545373 Msa0479540:intron 35.0%
AGAGAACATATGTTAGAGGT+AGG + chr3_3:84545408-84545427 None:intergenic 35.0%
TTGCAGAGAACATATGTTAG+AGG + chr3_3:84545412-84545431 None:intergenic 35.0%
TCGACAAACAAGCTCAAAAA+AGG + chr3_3:84545506-84545525 None:intergenic 35.0%
ACTTCCCAAATGAGATATCA+AGG + chr3_3:84545566-84545585 None:intergenic 35.0%
! TCAGGTGCATAATTTGTGTT+AGG + chr3_3:84545813-84545832 None:intergenic 35.0%
TTTCCAATCTGTCTCAAGTT+AGG + chr3_3:84545947-84545966 None:intergenic 35.0%
TCAGAACTTAAGTCAGAGTT+CGG + chr3_3:84546000-84546019 None:intergenic 35.0%
CTTGATAAGTGTTAAGGTCA+CGG - chr3_3:84546039-84546058 Msa0479540:intron 35.0%
GTCTTAAACTTCTCAACAAC+CGG - chr3_3:84546162-84546181 Msa0479540:intron 35.0%
AAAACAATTGGTCAGGTTCT+AGG + chr3_3:84546209-84546228 None:intergenic 35.0%
AAATGGAAGCAAAGAACTCA+AGG - chr3_3:84546255-84546274 Msa0479540:CDS 35.0%
AACTATATTCCCACTGCATA+AGG - chr3_3:84546332-84546351 Msa0479540:CDS 35.0%
ATTTGTCAGCATCAGATGAT+AGG + chr3_3:84546397-84546416 None:intergenic 35.0%
TTCAACACAATGTTCGTACA+CGG - chr3_3:84546439-84546458 Msa0479540:intron 35.0%
!!! TGTTTTTGGTTCTGGTACAA+AGG + chr3_3:84546702-84546721 None:intergenic 35.0%
GATATAGAGAATTGGAGCAT+TGG + chr3_3:84546811-84546830 None:intergenic 35.0%
TGGTTTCTTTCTCGGATTTA+GGG + chr3_3:84546857-84546876 None:intergenic 35.0%
TTGGTTTCTTTCTCGGATTT+AGG + chr3_3:84546858-84546877 None:intergenic 35.0%
CCAGAAATTGTTATGTTGCA+TGG + chr3_3:84547486-84547505 None:intergenic 35.0%
CCATGCAACATAACAATTTC+TGG - chr3_3:84547483-84547502 Msa0479540:CDS 35.0%
ACATGCAGAATCGTGAAAAA+AGG - chr3_3:84547542-84547561 Msa0479540:intron 35.0%
! AGTTTTTGCTTCATCATAGG+TGG + chr3_3:84547575-84547594 None:intergenic 35.0%
AACGGTATCTAAGTTCAGTT+GGG + chr3_3:84547723-84547742 None:intergenic 35.0%
AAACGGTATCTAAGTTCAGT+TGG + chr3_3:84547724-84547743 None:intergenic 35.0%
CGTAAAAAACCTTGGACAAA+CGG + chr3_3:84547741-84547760 None:intergenic 35.0%
!!! CGTTTGTCCAAGGTTTTTTA+CGG - chr3_3:84547739-84547758 Msa0479540:intron 35.0%
ATAAATATATGCCAAGTCCG+GGG + chr3_3:84547932-84547951 None:intergenic 35.0%
CATAAATATATGCCAAGTCC+GGG + chr3_3:84547933-84547952 None:intergenic 35.0%
GCATAAATATATGCCAAGTC+CGG + chr3_3:84547934-84547953 None:intergenic 35.0%
!! AAGTTTTGTCCTTGTGAGTT+TGG + chr3_3:84547976-84547995 None:intergenic 35.0%
ATCTCTCTTCAATTCACGTT+GGG + chr3_3:84548590-84548609 None:intergenic 35.0%
AAATTGAATGGAACGAGCTT+TGG + chr3_3:84548671-84548690 None:intergenic 35.0%
AGTGTAGAAGCAACTGAATT+TGG - chr3_3:84548822-84548841 Msa0479540:intron 35.0%
GTGTAGAAGCAACTGAATTT+GGG - chr3_3:84548823-84548842 Msa0479540:intron 35.0%
TGTGTGTGTGTATATTTGTG+AGG - chr3_3:84549037-84549056 Msa0479540:intron 35.0%
AGAGTAGTTGGAAAAAAGTC+GGG - chr3_3:84549507-84549526 Msa0479540:intron 35.0%
GATACCTTAATCTTCCACAA+CGG - chr3_3:84549536-84549555 Msa0479540:intron 35.0%
AAAATTAGTGAGGGGCAAAA+TGG - chr3_3:84549645-84549664 Msa0479540:intron 35.0%
AAATTAGTGAGGGGCAAAAT+GGG - chr3_3:84549646-84549665 Msa0479540:intron 35.0%
! TTACCATTTTGCCCTTATGA+GGG + chr3_3:84549739-84549758 None:intergenic 35.0%
! TTTACCATTTTGCCCTTATG+AGG + chr3_3:84549740-84549759 None:intergenic 35.0%
GGGCAAAATGGTAAAATCAT+AGG - chr3_3:84549745-84549764 Msa0479540:CDS 35.0%
ATATAGTAAGTAGATGGCCT+AGG - chr3_3:84549782-84549801 Msa0479540:CDS 35.0%
GCTGGAAATGAAACATTTGG+TGG + chr3_3:84539725-84539744 None:intergenic 40.0%
TCTCCAAACACAAATACTGC+TGG + chr3_3:84539743-84539762 None:intergenic 40.0%
GGAGATTCAATCATGGATAC+GGG - chr3_3:84539758-84539777 Msa0479540:three_prime_UTR 40.0%
AAGGGCAACAAGCTCAATTT+AGG + chr3_3:84539986-84540005 None:intergenic 40.0%
!! AATTGAGCTTGTTGCCCTTA+CGG - chr3_3:84539987-84540006 Msa0479540:intron 40.0%
ATTACCCTCAATTCATCGAG+AGG - chr3_3:84540168-84540187 Msa0479540:intron 40.0%
CATTACCTCTCGATGAATTG+AGG + chr3_3:84540176-84540195 None:intergenic 40.0%
TTTCACTCACCACTCTTAGA+TGG + chr3_3:84540208-84540227 None:intergenic 40.0%
ACTCATCATGAGTTCACCAT+TGG + chr3_3:84540907-84540926 None:intergenic 40.0%
CATATTAGGTGCTCCCTATT+TGG + chr3_3:84541008-84541027 None:intergenic 40.0%
!! CAAATAGGGAGCACCTAATA+TGG - chr3_3:84541006-84541025 Msa0479540:intron 40.0%
ATATGGGCACCAAATTGAAG+GGG - chr3_3:84541023-84541042 Msa0479540:intron 40.0%
AAAAACAAGAGTTGACTGGC+CGG + chr3_3:84541079-84541098 None:intergenic 40.0%
!!! GCCAGTCAACTCTTGTTTTT+GGG - chr3_3:84541079-84541098 Msa0479540:intron 40.0%
!!! CCAGTCAACTCTTGTTTTTG+GGG - chr3_3:84541080-84541099 Msa0479540:intron 40.0%
TCCTTCAACTACTACTTCTG+TGG + chr3_3:84541344-84541363 None:intergenic 40.0%
GACCCCAAATTGAAAGATCA+TGG + chr3_3:84541469-84541488 None:intergenic 40.0%
GGGAATTAAGGAATTTCTGC+CGG - chr3_3:84541845-84541864 Msa0479540:intron 40.0%
! AGATCGCTAGGTTGGATATT+TGG + chr3_3:84541882-84541901 None:intergenic 40.0%
! CAAAATACGTACCGCAGTTT+TGG + chr3_3:84541958-84541977 None:intergenic 40.0%
CAAATCTATTTGACCGGACA+AGG + chr3_3:84542075-84542094 None:intergenic 40.0%
GCTAAAAGGAATTGTTGGAG+AGG - chr3_3:84542115-84542134 Msa0479540:intron 40.0%
AACCACAAGGAAAACACTGT+TGG + chr3_3:84542162-84542181 None:intergenic 40.0%
! AGTGTTTTCCTTGTGGTTCA+AGG - chr3_3:84542164-84542183 Msa0479540:intron 40.0%
! TTAGACTCGACCCTTTTAGT+TGG + chr3_3:84542546-84542565 None:intergenic 40.0%
AACTAAAAGGGTCGAGTCTA+AGG - chr3_3:84542545-84542564 Msa0479540:intron 40.0%
AGGTCTAGACCTCCATAATA+CGG - chr3_3:84542571-84542590 Msa0479540:intron 40.0%
CATTCTTTAACTCCTGGATG+AGG + chr3_3:84543060-84543079 None:intergenic 40.0%
!! TATATCAACTTGGTGCAAGG+AGG - chr3_3:84543153-84543172 Msa0479540:intron 40.0%
AAAGATTGAACTCCCGAGTT+AGG - chr3_3:84543625-84543644 Msa0479540:intron 40.0%
AAGTAGTCAAGTGCACTCTA+AGG + chr3_3:84543851-84543870 None:intergenic 40.0%
AGTCCCTAACATCTTCACAT+TGG + chr3_3:84544740-84544759 None:intergenic 40.0%
! ATGTTAGGGACTACGTTTTC+TGG - chr3_3:84544748-84544767 Msa0479540:CDS 40.0%
! TGTTAGGGACTACGTTTTCT+GGG - chr3_3:84544749-84544768 Msa0479540:CDS 40.0%
CTCTGCAAAAGTTGAACCAT+TGG - chr3_3:84545424-84545443 Msa0479540:intron 40.0%
AAAAATACTTAGGCGGCCAA+TGG + chr3_3:84545443-84545462 None:intergenic 40.0%
! GGACATTTCTAAAAGGCACA+CGG + chr3_3:84545545-84545564 None:intergenic 40.0%
!! TATCTCATTTGGGAAGTGCT+AGG - chr3_3:84545569-84545588 Msa0479540:intron 40.0%
TCTCATAGTACCATCCAAAC+TGG - chr3_3:84545741-84545760 Msa0479540:intron 40.0%
TAGTACCATCCAAACTGGTT+AGG - chr3_3:84545746-84545765 Msa0479540:intron 40.0%
TCAATCCTAACCAGTTTGGA+TGG + chr3_3:84545754-84545773 None:intergenic 40.0%
CGGCAACAAATCAAGAAACA+TGG - chr3_3:84546059-84546078 Msa0479540:intron 40.0%
GATGTCTTTCCTTATGCAGT+GGG + chr3_3:84546344-84546363 None:intergenic 40.0%
AGATGTCTTTCCTTATGCAG+TGG + chr3_3:84546345-84546364 None:intergenic 40.0%
TTGTCAAGACAACGCCAATT+GGG + chr3_3:84546477-84546496 None:intergenic 40.0%
ATTGTCAAGACAACGCCAAT+TGG + chr3_3:84546478-84546497 None:intergenic 40.0%
! GAAAATAGGATTTGGAGTGC+TGG + chr3_3:84547035-84547054 None:intergenic 40.0%
CAGTCAATTCAAGTCATGCA+TGG - chr3_3:84547635-84547654 Msa0479540:CDS 40.0%
GGTCTCTGAACCATGAAAAA+AGG - chr3_3:84547656-84547675 Msa0479540:CDS 40.0%
ACTTAGATACCGTTTGTCCA+AGG - chr3_3:84547729-84547748 Msa0479540:intron 40.0%
ATACACACACACACACACAT+TGG + chr3_3:84548305-84548324 None:intergenic 40.0%
CATCTCTCTTCAATTCACGT+TGG + chr3_3:84548591-84548610 None:intergenic 40.0%
GATTAAGATACCGTTTGACC+CGG + chr3_3:84548791-84548810 None:intergenic 40.0%
GGTATCTTAATCTCCCACAA+CGG - chr3_3:84548799-84548818 Msa0479540:intron 40.0%
ATTGCCGTTGTGGAAGATTA+AGG + chr3_3:84549543-84549562 None:intergenic 40.0%
TGGGAAATTCACCCATATCA+TGG - chr3_3:84549665-84549684 Msa0479540:intron 40.0%
AATTCACCCATATCATGGTG+AGG - chr3_3:84549670-84549689 Msa0479540:intron 40.0%
TTACGAAAATGCCCCTCATA+AGG - chr3_3:84549724-84549743 Msa0479540:CDS 40.0%
TACGAAAATGCCCCTCATAA+GGG - chr3_3:84549725-84549744 Msa0479540:CDS 40.0%
! TACCATTTTGCCCTTATGAG+GGG + chr3_3:84549738-84549757 None:intergenic 40.0%
!! GAGTATGGTGATGTTTTGTG+AGG - chr3_3:84549815-84549834 Msa0479540:CDS 40.0%
!! TATGGTGATGTTTTGTGAGG+TGG - chr3_3:84549818-84549837 Msa0479540:CDS 40.0%
CATTGCAAAACCGACCAGTA+GGG + chr3_3:84539859-84539878 None:intergenic 45.0%
GTAGTCAACGATCACAGTTG+CGG + chr3_3:84540118-84540137 None:intergenic 45.0%
!!! GGCCAGTCAACTCTTGTTTT+TGG - chr3_3:84541078-84541097 Msa0479540:intron 45.0%
CCCCAAAAACAAGAGTTGAC+TGG + chr3_3:84541083-84541102 None:intergenic 45.0%
GCCACAGAAGTAGTAGTTGA+AGG - chr3_3:84541340-84541359 Msa0479540:intron 45.0%
GTGAAATTTGAACCGTCCCA+TGG + chr3_3:84541652-84541671 None:intergenic 45.0%
GTTTGCACGCATTCAATGCA+TGG + chr3_3:84541739-84541758 None:intergenic 45.0%
GACTAGGGAGTCTGAATTCA+AGG - chr3_3:84541771-84541790 Msa0479540:intron 45.0%
ACAGGTGTTTGCTTTGCATC+CGG - chr3_3:84541906-84541925 Msa0479540:intron 45.0%
TCCACTCACATCCAAAACTG+CGG - chr3_3:84541944-84541963 Msa0479540:intron 45.0%
CAGTCAGCTATATCCTTGTC+CGG - chr3_3:84542059-84542078 Msa0479540:intron 45.0%
! CAAGGAAAACACTGTTGGCT+AGG + chr3_3:84542157-84542176 None:intergenic 45.0%
! AGCCAACAGTGTTTTCCTTG+TGG - chr3_3:84542157-84542176 Msa0479540:intron 45.0%
CGTTACTTCCTTGAACCACA+AGG + chr3_3:84542175-84542194 None:intergenic 45.0%
TCCTTCTTACACTGACCTCA+TGG - chr3_3:84542247-84542266 Msa0479540:intron 45.0%
ACCATGAGGTCAGTGTAAGA+AGG + chr3_3:84542251-84542270 None:intergenic 45.0%
AAGGGTCGAGTCTAAGGAAA+AGG - chr3_3:84542551-84542570 Msa0479540:intron 45.0%
ATCTACAGTGGAGGAACCTA+TGG - chr3_3:84542660-84542679 Msa0479540:intron 45.0%
TGAAATGGCACACACCCAAT+TGG + chr3_3:84543200-84543219 None:intergenic 45.0%
!! GTGTGTGCCATTTCAGAGAA+CGG - chr3_3:84543205-84543224 Msa0479540:intron 45.0%
! CCAACAACCGTTCTCTGAAA+TGG + chr3_3:84543215-84543234 None:intergenic 45.0%
CCATTTCAGAGAACGGTTGT+TGG - chr3_3:84543212-84543231 Msa0479540:intron 45.0%
TTTCAGAGAACGGTTGTTGG+AGG - chr3_3:84543215-84543234 Msa0479540:intron 45.0%
AGAACGGTTGTTGGAGGAAT+TGG - chr3_3:84543221-84543240 Msa0479540:intron 45.0%
! AGGAGTTGGCTTCTCTTAAC+CGG - chr3_3:84543303-84543322 Msa0479540:intron 45.0%
TCCTTGTATTGGGCAAGTTC+CGG + chr3_3:84543325-84543344 None:intergenic 45.0%
GAACTTGCCCAATACAAGGA+TGG - chr3_3:84543325-84543344 Msa0479540:intron 45.0%
! CGGATCTAGAATCCTAACTC+GGG + chr3_3:84543640-84543659 None:intergenic 45.0%
! GCGGATCTAGAATCCTAACT+CGG + chr3_3:84543641-84543660 None:intergenic 45.0%
GTCGTTGACAAAGGATGTTG+TGG - chr3_3:84544669-84544688 Msa0479540:three_prime_UTR 45.0%
TTGCTGTAAACACTCTCCGA+GGG + chr3_3:84544786-84544805 None:intergenic 45.0%
TGGCCTAACTTGAGACAGAT+TGG - chr3_3:84545941-84545960 Msa0479540:intron 45.0%
TCTCAACAACCGGATGATGT+AGG - chr3_3:84546172-84546191 Msa0479540:intron 45.0%
GCTCATCAACCTACATCATC+CGG + chr3_3:84546184-84546203 None:intergenic 45.0%
GGTTTCTTTCCAGTCCCAAT+TGG - chr3_3:84546460-84546479 Msa0479540:intron 45.0%
GCATTGGAAGACTTTGATCG+AGG + chr3_3:84546795-84546814 None:intergenic 45.0%
CTGGATTCTTGGATTGTGAC+TGG + chr3_3:84547016-84547035 None:intergenic 45.0%
!! GATTTGGAGTGCTGGATTCT+TGG + chr3_3:84547027-84547046 None:intergenic 45.0%
! GTGAGTTTGGCTCAGATGAT+AGG + chr3_3:84547963-84547982 None:intergenic 45.0%
TCATCTGAGCCAAACTCACA+AGG - chr3_3:84547964-84547983 Msa0479540:intron 45.0%
TTGCTTCTACACTCCGTTGT+GGG + chr3_3:84548815-84548834 None:intergenic 45.0%
! ACCTCTTTTCAACTCACGCA+GGG + chr3_3:84549328-84549347 None:intergenic 45.0%
TTGCTTCTACATTGCCGTTG+TGG + chr3_3:84549553-84549572 None:intergenic 45.0%
TTGCCACCTCACCATGATAT+GGG + chr3_3:84549679-84549698 None:intergenic 45.0%
!!! TTTTAACAATAATAAAAATA+AGG - chr3_3:84540327-84540346 Msa0479540:intron 5.0%
!! TTTAACAATAATAAAAATAA+GGG - chr3_3:84540328-84540347 Msa0479540:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - chr3_3:84540640-84540659 Msa0479540:intron 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr3_3:84540713-84540732 Msa0479540:intron 5.0%
!! CAAAAATTAAATTAAAAATA+GGG - chr3_3:84540714-84540733 Msa0479540:intron 5.0%
!! AAAAATTAAATTAAAAATAG+GGG - chr3_3:84540715-84540734 Msa0479540:intron 5.0%
!!! TTTGATTTATTTATATTTTT+TGG + chr3_3:84546877-84546896 None:intergenic 5.0%
!!! ATTTTATAAAAATAATCATA+CGG - chr3_3:84548203-84548222 Msa0479540:intron 5.0%
!!! AATAAAATTGATTTAAAAAA+AGG - chr3_3:84548449-84548468 Msa0479540:intron 5.0%
!! ATAGTTAAAAATAAAAAAAT+TGG - chr3_3:84548860-84548879 Msa0479540:intron 5.0%
!! ATAAAAAAAATAAAGTTAAA+TGG - chr3_3:84549253-84549272 Msa0479540:intron 5.0%
!! ATATTAAAAAATAAAAGAAA+AGG - chr3_3:84549300-84549319 Msa0479540:intron 5.0%
!! TTCAAAGGAGGCATCCCTAC+TGG - chr3_3:84539842-84539861 Msa0479540:intron 50.0%
CCATTGCAAAACCGACCAGT+AGG + chr3_3:84539860-84539879 None:intergenic 50.0%
!! CCTACTGGTCGGTTTTGCAA+TGG - chr3_3:84539857-84539876 Msa0479540:intron 50.0%
TACAACCCCGCTCCCAAATA+GGG - chr3_3:84540992-84541011 Msa0479540:intron 50.0%
CATCCATGGCCCCTTCAATT+TGG + chr3_3:84541035-84541054 None:intergenic 50.0%
CCAGCCGATCACCATTTGTT+GGG + chr3_3:84541422-84541441 None:intergenic 50.0%
TCCAGCCGATCACCATTTGT+TGG + chr3_3:84541423-84541442 None:intergenic 50.0%
GCATTGAATGCGTGCAAACG+AGG - chr3_3:84541740-84541759 Msa0479540:intron 50.0%
TGAATGCGTGCAAACGAGGA+CGG - chr3_3:84541744-84541763 Msa0479540:intron 50.0%
GGAATTTCTGCCGGCGTATT+TGG - chr3_3:84541854-84541873 Msa0479540:intron 50.0%
CTGTGACAAGATCGCTAGGT+TGG + chr3_3:84541890-84541909 None:intergenic 50.0%
CAACCTAGCGATCTTGTCAC+AGG - chr3_3:84541888-84541907 Msa0479540:intron 50.0%
ACACCTGTGACAAGATCGCT+AGG + chr3_3:84541894-84541913 None:intergenic 50.0%
GGATGTGAGTGGATCATACC+CGG + chr3_3:84541937-84541956 None:intergenic 50.0%
!!! ACCGCAGTTTTGGATGTGAG+TGG + chr3_3:84541948-84541967 None:intergenic 50.0%
CGGACAAGGATATAGCTGAC+TGG + chr3_3:84542061-84542080 None:intergenic 50.0%
!! CAACTTGGTGCAAGGAGGAT+AGG - chr3_3:84543158-84543177 Msa0479540:intron 50.0%
AATGGCACACACCCAATTGG+TGG + chr3_3:84543197-84543216 None:intergenic 50.0%
ACCGGAACTTGCCCAATACA+AGG - chr3_3:84543321-84543340 Msa0479540:intron 50.0%
GACAAAGGATGTTGTGGCAC+AGG - chr3_3:84544675-84544694 Msa0479540:three_prime_UTR 50.0%
! CTGGGACAGTTTTCATCCCT+CGG - chr3_3:84544767-84544786 Msa0479540:CDS 50.0%
! CTTGCTGTAAACACTCTCCG+AGG + chr3_3:84544787-84544806 None:intergenic 50.0%
TTACAAACCCGTGCTTCGCA+CGG - chr3_3:84544948-84544967 Msa0479540:intron 50.0%
TATTGAACCCGTGCGAAGCA+CGG + chr3_3:84544959-84544978 None:intergenic 50.0%
AAGACAACGCCAATTGGGAC+TGG + chr3_3:84546472-84546491 None:intergenic 50.0%
GTTGCTTCTACACTCCGTTG+TGG + chr3_3:84548816-84548835 None:intergenic 50.0%
! TCCCTGCGTGAGTTGAAAAG+AGG - chr3_3:84549324-84549343 Msa0479540:intron 50.0%
! CACCTCTTTTCAACTCACGC+AGG + chr3_3:84549329-84549348 None:intergenic 50.0%
TCACCCATATCATGGTGAGG+TGG - chr3_3:84549673-84549692 Msa0479540:intron 50.0%
GTTGCCACCTCACCATGATA+TGG + chr3_3:84549680-84549699 None:intergenic 50.0%
TGCCCCTCATAAGGGCAAAA+TGG - chr3_3:84549733-84549752 Msa0479540:CDS 50.0%
! GGTGATGTTTTGTGAGGTGG+CGG - chr3_3:84549821-84549840 Msa0479540:CDS 50.0%
!! AAGGAGGCATCCCTACTGGT+CGG - chr3_3:84539846-84539865 Msa0479540:intron 55.0%
CTACAACCCCGCTCCCAAAT+AGG - chr3_3:84540991-84541010 Msa0479540:intron 55.0%
AGGTGCTCCCTATTTGGGAG+CGG + chr3_3:84541002-84541021 None:intergenic 55.0%
GCACCAAATTGAAGGGGCCA+TGG - chr3_3:84541029-84541048 Msa0479540:intron 55.0%
CCCAACAAATGGTGATCGGC+TGG - chr3_3:84541419-84541438 Msa0479540:intron 55.0%
AAATGGTGATCGGCTGGAGC+TGG - chr3_3:84541425-84541444 Msa0479540:intron 55.0%
AAACGAGGACGGTAGGGACT+AGG - chr3_3:84541755-84541774 Msa0479540:intron 55.0%
AACGAGGACGGTAGGGACTA+GGG - chr3_3:84541756-84541775 Msa0479540:intron 55.0%
GGTGTTTGCTTTGCATCCGG+TGG - chr3_3:84541909-84541928 Msa0479540:intron 55.0%
TGCTTTGCATCCGGTGGTTC+CGG - chr3_3:84541915-84541934 Msa0479540:intron 55.0%
TGGATCATACCCGGAACCAC+CGG + chr3_3:84541928-84541947 None:intergenic 55.0%
TTGTGGCACAGGAGCAGTAG+AGG - chr3_3:84544686-84544705 Msa0479540:three_prime_UTR 55.0%
TACAAACCCGTGCTTCGCAC+GGG - chr3_3:84544949-84544968 Msa0479540:intron 55.0%
ATTGAACCCGTGCGAAGCAC+GGG + chr3_3:84544958-84544977 None:intergenic 55.0%
GTGCTCCCTATTTGGGAGCG+GGG + chr3_3:84541000-84541019 None:intergenic 60.0%
GGTGCTCCCTATTTGGGAGC+GGG + chr3_3:84541001-84541020 None:intergenic 60.0%
TGCGTGCAAACGAGGACGGT+AGG - chr3_3:84541748-84541767 Msa0479540:intron 60.0%
GCGTGCAAACGAGGACGGTA+GGG - chr3_3:84541749-84541768 Msa0479540:intron 60.0%
GCTTTGCATCCGGTGGTTCC+GGG - chr3_3:84541916-84541935 Msa0479540:intron 60.0%
TGGAAGCAGAGGCGACCATG+AGG + chr3_3:84542265-84542284 None:intergenic 60.0%
! GGTGTCTGGGGTTCGAACCC+CGG - chr3_3:84547912-84547931 Msa0479540:intron 65.0%
TGGGGTTCGAACCCCGGACT+TGG - chr3_3:84547918-84547937 Msa0479540:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84539623 84549957 84539623 ID=Msa0479540;Name=Msa0479540
chr3_3 mRNA 84539623 84549957 84539623 ID=Msa0479540-mRNA-1;Parent=Msa0479540;Name=Msa0479540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=15|1|1|1|0.6|0.5|6|289|358
chr3_3 exon 84539623 84539792 84539623 ID=Msa0479540-mRNA-1:exon:24036;Parent=Msa0479540-mRNA-1
chr3_3 exon 84544610 84544919 84544610 ID=Msa0479540-mRNA-1:exon:24035;Parent=Msa0479540-mRNA-1
chr3_3 exon 84546176 84546431 84546176 ID=Msa0479540-mRNA-1:exon:24034;Parent=Msa0479540-mRNA-1
chr3_3 exon 84547285 84547518 84547285 ID=Msa0479540-mRNA-1:exon:24033;Parent=Msa0479540-mRNA-1
chr3_3 exon 84547615 84547745 84547615 ID=Msa0479540-mRNA-1:exon:24032;Parent=Msa0479540-mRNA-1
chr3_3 exon 84549678 84549957 84549678 ID=Msa0479540-mRNA-1:exon:24031;Parent=Msa0479540-mRNA-1
chr3_3 five_prime_UTR 84549943 84549957 84549943 ID=Msa0479540-mRNA-1:five_prime_utr;Parent=Msa0479540-mRNA-1
chr3_3 CDS 84549678 84549942 84549678 ID=Msa0479540-mRNA-1:cds;Parent=Msa0479540-mRNA-1
chr3_3 CDS 84547615 84547745 84547615 ID=Msa0479540-mRNA-1:cds;Parent=Msa0479540-mRNA-1
chr3_3 CDS 84547285 84547518 84547285 ID=Msa0479540-mRNA-1:cds;Parent=Msa0479540-mRNA-1
chr3_3 CDS 84546176 84546431 84546176 ID=Msa0479540-mRNA-1:cds;Parent=Msa0479540-mRNA-1
chr3_3 CDS 84544729 84544919 84544729 ID=Msa0479540-mRNA-1:cds;Parent=Msa0479540-mRNA-1
chr3_3 three_prime_UTR 84544610 84544728 84544610 ID=Msa0479540-mRNA-1:three_prime_utr;Parent=Msa0479540-mRNA-1
chr3_3 three_prime_UTR 84539623 84539792 84539623 ID=Msa0479540-mRNA-1:three_prime_utr;Parent=Msa0479540-mRNA-1
Gene Sequence

>Msa0479540

ATGTGTTCCTTGATGATTTGTTTCTTCATATTATTGGGAGTTATTTCTTACACAACTAAGGCTAGTTTGGCAACACTAGTGCTTCCACCAAATGTTTCATTTCCAGCAGTATTTGTGTTTGGAGATTCAATCATGGATACGGGCAACAACAATAATAACATGAAAACATATGCTAGGTGCAATTTTCTTCCATATGGGAAAGATTTCAAAGGAGGCATCCCTACTGGTCGGTTTTGCAATGGAAAAGTTCCATCAGACTATATAGTTGAAGCATTGGGAATTAAGGAATTTCTGCCGGCGTATTTGGATCCAAATATCCAACCTAGCGATCTTGTCACAGGTGTTTGCTTTGCATCCGGTGGTTCCGGGTATGATCCACTCACATCCAAAACTGCGTCAGCTATATCCTTGTCCGGTCAAATAGATTTGTTCAAAGAATACATAGGAAAGCTAAAAGGAATTGTTGGAGAGGGTAGAACAAATTTCATCCTAGCCAACAGTGTTTTCCTTGTGGTTCAAGGAAGTAACGACATTTCCAATACATATTTTTTGAGCCATCTTAGAGAACTACAATATGATGTTCCTTCTTACACTGACCTCATGGTCGCCTCTGCTTCCAATTTCTTAAAGGAAATATATCAACTTGGTGCAAGGAGGATAGGAGTATTAAGTGTTCCACCAATTGGGTGTGTGCCATTTCAGAGAACGGTTGTTGGAGGAATTGGAAGAAAATGTGCAGAAAAAATCAACGACGCATGCAAGTTATTCAACACTAAATTATCAAAGGAGTTGGCTTCTCTTAACCGGAACTTGCCCAATACAAGGATGGTTTACCTTGATGTTTACAATCCTCTTCTTGACATCATCCTAAATTACCAAAATTATGGTTATAAAGTCGTTGACAAAGGATGTTGTGGCACAGGAGCAGTAGAGGTAGCAGTGTTATGCAACCAATTTGCTATCCAATGTGAAGATGTTAGGGACTACGTTTTCTGGGACAGTTTTCATCCCTCGGAGAGTGTTTACAGCAAGCTCTTAAATCCTCTTCTTCGAAAATATATACACCAGTTCTTCTAG
Protein sequence

>Msa0479540

MCSLMICFFILLGVISYTTKASLATLVLPPNVSFPAVFVFGDSIMDTGNNNNNMKTYARCNFLPYGKDFKGGIPTGRFCNGKVPSDYIVEALGIKEFLPAYLDPNIQPSDLVTGVCFASGGSGYDPLTSKTASAISLSGQIDLFKEYIGKLKGIVGEGRTNFILANSVFLVVQGSNDISNTYFLSHLRELQYDVPSYTDLMVASASNFLKEIYQLGARRIGVLSVPPIGCVPFQRTVVGGIGRKCAEKINDACKLFNTKLSKELASLNRNLPNTRMVYLDVYNPLLDIILNYQNYGYKVVDKGCCGTGAVEVAVLCNQFAIQCEDVRDYVFWDSFHPSESVYSKLLNPLLRKYIHQFF*