AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0539750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539750 MtrunA17_Chr4g0015091 94.172 326 7 2 1 314 1 326 0.0 617
Msa0539750 MtrunA17_Chr4g0015091 83.062 307 51 1 315 621 23 328 0.0 519
Msa0539750 MtrunA17_Chr4g0015051 92.378 328 25 0 295 622 3 330 0.0 607
Msa0539750 MtrunA17_Chr4g0015051 79.205 327 55 3 1 314 1 327 0.0 521
Msa0539750 MtrunA17_Chr4g0014971 87.147 319 40 1 304 622 13 330 0.0 558
Msa0539750 MtrunA17_Chr4g0014971 77.370 327 61 3 1 314 1 327 3.09e-178 508
Msa0539750 MtrunA17_Chr4g0014951 85.580 319 45 1 304 622 13 330 0.0 555
Msa0539750 MtrunA17_Chr4g0014951 76.453 327 64 3 1 314 1 327 1.35e-177 506
Msa0539750 MtrunA17_Chr4g0014931 86.520 319 42 1 304 622 13 330 0.0 549
Msa0539750 MtrunA17_Chr4g0014931 75.229 327 68 3 1 314 1 327 1.19e-170 488
Msa0539750 MtrunA17_Chr4g0014691 79.310 319 64 2 304 622 13 329 1.99e-179 511
Msa0539750 MtrunA17_Chr4g0014691 76.687 326 64 2 1 314 1 326 1.93e-176 503
Msa0539750 MtrunA17_Chr4g0014541 79.310 319 64 2 304 622 13 329 1.37e-178 509
Msa0539750 MtrunA17_Chr4g0014541 76.994 326 63 2 1 314 1 326 3.52e-177 505
Msa0539750 MtrunA17_Chr7g0235021 66.984 315 102 2 307 621 16 328 3.01e-144 421
Msa0539750 MtrunA17_Chr7g0235021 63.914 327 104 4 1 314 1 326 3.10e-142 416
Msa0539750 MtrunA17_Chr4g0015001 86.900 229 30 0 393 621 2 230 4.43e-137 399
Msa0539750 MtrunA17_Chr4g0015001 75.221 226 44 2 101 314 3 228 7.99e-114 340
Msa0539750 MtrunA17_Chr8g0365421 35.202 321 158 9 318 622 96 382 9.90e-39 147
Msa0539750 MtrunA17_Chr8g0365421 31.471 340 176 9 6 319 76 384 5.34e-31 125
Msa0539750 MtrunA17_Chr8g0351271 32.698 315 172 9 317 620 22 307 1.64e-30 122
Msa0539750 MtrunA17_Chr8g0351271 27.273 363 208 10 4 341 2 333 2.44e-28 116
Msa0539750 MtrunA17_Chr8g0351481 32.698 315 172 9 317 620 22 307 3.00e-30 122
Msa0539750 MtrunA17_Chr8g0351481 27.273 352 213 10 4 338 2 327 1.76e-28 116
Msa0539750 MtrunA17_Chr6g0453201 33.333 315 172 8 318 622 32 318 5.32e-30 120
Msa0539750 MtrunA17_Chr6g0453201 33.025 324 183 10 11 319 16 320 3.84e-27 112
Msa0539750 MtrunA17_Chr6g0466321 31.751 337 185 10 300 622 21 326 1.02e-28 117
Msa0539750 MtrunA17_Chr6g0466321 29.630 324 194 10 11 319 24 328 1.63e-23 102
Msa0539750 MtrunA17_Chr6g0465501 31.657 338 186 10 299 622 20 326 1.22e-28 117
Msa0539750 MtrunA17_Chr6g0465501 29.630 324 194 10 11 319 24 328 2.98e-23 101
Msa0539750 MtrunA17_Chr7g0228011 33.631 336 180 12 300 622 10 315 3.81e-28 115
Msa0539750 MtrunA17_Chr7g0228011 33.333 342 180 13 1 319 1 317 4.39e-24 103
Msa0539750 MtrunA17_Chr2g0316731 29.878 328 200 9 314 621 42 359 3.59e-26 110
Msa0539750 MtrunA17_Chr2g0316731 27.679 336 193 11 16 314 35 357 2.67e-20 93.2
Msa0539750 MtrunA17_Chr6g0453191 31.379 290 163 6 318 599 32 293 3.89e-24 103
Msa0539750 MtrunA17_Chr6g0453191 32.323 297 169 8 11 294 16 293 5.63e-24 102
Msa0539750 MtrunA17_Chr2g0281281 27.439 328 191 12 317 620 19 323 9.83e-20 90.9
Msa0539750 MtrunA17_Chr2g0281281 28.308 325 199 11 16 316 10 324 7.37e-15 76.3
Msa0539750 MtrunA17_Chr2g0281301 26.935 323 199 10 317 620 32 336 9.34e-19 88.2
Msa0539750 MtrunA17_Chr2g0281301 27.692 325 201 10 16 316 23 337 7.22e-13 70.1
Msa0539750 MtrunA17_Chr4g0045041 28.682 387 229 15 268 620 247 620 9.30e-17 84.0
Msa0539750 MtrunA17_Chr4g0045041 29.091 330 179 16 24 314 306 619 1.04e-11 67.8
Msa0539750 MtrunA17_Chr4g0045061 30.211 331 189 13 316 620 306 620 1.30e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539750 AT4G13010.1 73.041 319 84 2 304 622 13 329 4.61e-158 457
Msa0539750 AT4G13010.1 69.632 326 87 2 1 314 1 326 9.22e-155 448
Msa0539750 AT1G23740.1 33.526 346 186 10 289 622 71 384 3.34e-37 143
Msa0539750 AT1G23740.1 30.792 341 181 10 4 319 76 386 9.88e-28 115
Msa0539750 AT3G15090.1 30.650 323 196 6 318 621 52 365 5.76e-28 116
Msa0539750 AT3G15090.1 27.492 331 200 9 16 314 41 363 5.21e-22 98.6
Msa0539750 AT1G49670.1 31.915 329 182 16 316 620 306 616 1.62e-17 87.0
Msa0539750 AT1G49670.1 26.879 346 200 14 19 328 301 629 1.92e-11 67.4
Msa0539750 AT1G49670.2 30.548 347 186 17 316 620 306 639 9.45e-15 78.2
Msa0539750 AT4G21580.1 27.044 318 207 13 317 621 19 324 1.30e-14 75.9
Msa0539750 AT4G21580.1 25.926 324 204 12 16 314 10 322 5.92e-11 64.7
Msa0539750 AT4G21580.3 27.129 317 202 13 317 621 19 318 3.92e-14 74.3
Msa0539750 AT4G21580.3 26.101 318 205 12 16 314 10 316 3.52e-11 65.5
Msa0539750 AT4G21580.2 26.296 270 177 10 365 621 31 291 2.78e-12 68.2
Msa0539750 AT5G61510.2 24.432 352 236 10 289 622 10 349 1.63e-11 66.6
Msa0539750 AT3G56460.1 31.795 195 113 5 16 198 18 204 2.10e-11 66.2

Find 160 sgRNAs with CRISPR-Local

Find 757 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCCTAATTTGTCTGAAAA+TGG 0.102395 4_1:-20958470 Msa0539750:CDS
TCATGTAGAAATGAATAATT+TGG 0.166052 4_1:-20948401 Msa0539750:three_prime_UTR
GATCCTAATTTGAGTGAAAA+AGG 0.192233 4_1:-20948743 Msa0539750:CDS
ATTAAAACTTCATTGGTCTT+TGG 0.254922 4_1:+20960308 None:intergenic
CGTGACGCCCTGACAGAAAT+TGG 0.273115 4_1:-20949040 Msa0539750:CDS
ATGTCCTGATTCTCTCTTGC+TGG 0.278300 4_1:-20948343 Msa0539750:three_prime_UTR
CTTTGAATCTTCCAATCAAC+TGG 0.280800 4_1:+20960260 None:intergenic
CACCAAGCAAACTGAGACTA+TGG 0.285432 4_1:+20948470 None:intergenic
AGTAAAACTTCATTAGTCTT+TGG 0.288694 4_1:+20953158 None:intergenic
ACTTCATTGGTCTTTGGAAT+TGG 0.292552 4_1:+20960314 None:intergenic
GATTCAGGCACTGATATATC+AGG 0.311329 4_1:-20959426 Msa0539750:intron
GACTGAATCTTCCAATCAAC+TGG 0.313131 4_1:+20953110 None:intergenic
AGCAGTTACCAAAATGTTCT+TGG 0.327789 4_1:+20958715 None:intergenic
AAATCCAACGCGCGAGGGCT+TGG 0.330209 4_1:-20958351 Msa0539750:CDS
CACGTGGTTGTTCCCTAGTT+TGG 0.331494 4_1:+20948928 None:intergenic
CTTGGAACATCTTGCTCAAT+TGG 0.332897 4_1:-20958333 Msa0539750:CDS
AGATTCAGTCTGGTGCTCTA+AGG 0.338199 4_1:-20953097 Msa0539750:CDS
CACTTTGATTAAAACTTCAT+TGG 0.342619 4_1:+20960301 None:intergenic
GCAAAAGTCCACATTGATCT+TGG 0.347963 4_1:+20958422 None:intergenic
TGGTGAGCCCAAGAACATTT+TGG 0.349219 4_1:-20958723 Msa0539750:CDS
ATTTAATATCTTACAGCATA+TGG 0.356824 4_1:+20948372 None:intergenic
ACCCTAATTTGTCTGAAAAT+GGG 0.358504 4_1:-20958469 Msa0539750:CDS
GTGATGTGCTCACCCAAGTT+GGG 0.369352 4_1:-20958766 Msa0539750:CDS
AAGTACTGGATTTGTGAGTT+TGG 0.373851 4_1:+20959344 None:intergenic
AACTGTTAAGCGTGAGGGCT+TGG 0.380438 4_1:-20948624 Msa0539750:CDS
CCTTCAGCAGCTGAGACTTC+AGG 0.386418 4_1:+20949094 None:intergenic
TAAACATTTCATTACCATAT+AGG 0.392525 4_1:+20948233 None:intergenic
CAAACCAGCAAGAGAGAATC+AGG 0.392916 4_1:+20948339 None:intergenic
TTGAACTGCATGCATGAGTT+TGG 0.394662 4_1:+20960495 None:intergenic
ATTATGTAGCTGATCCTATA+TGG 0.395569 4_1:-20948247 Msa0539750:three_prime_UTR
TTGGTCTTTGGAATTGGAAC+AGG 0.397448 4_1:+20960320 None:intergenic
ATTGGAGGAATTAAGCTTGA+TGG 0.403108 4_1:-20949022 Msa0539750:CDS
AGCTTTGCTCAAAGGAAACT+TGG 0.403581 4_1:+20958277 None:intergenic
AGCTGAGACTTCAGGTGGTC+TGG 0.404146 4_1:+20949102 None:intergenic
CAAGCATTAACCCAGTTGAT+TGG 0.412999 4_1:-20960271 Msa0539750:CDS
AGCATTGATGGCCATGCTAC+TGG 0.417432 4_1:-20958236 Msa0539750:CDS
TAATTCCTCCAATTTCTGTC+AGG 0.417688 4_1:+20949032 None:intergenic
GTTCTGGTAACTGCTGCTTC+AGG 0.419974 4_1:-20948980 Msa0539750:CDS
AGTATTGATGGCCATGCTAC+TGG 0.420478 4_1:-20948509 Msa0539750:CDS
GCTGTTCAACTTGCCAAACT+AGG 0.421441 4_1:-20948941 Msa0539750:CDS
AGAGATTGGACCACAAGTTA+AGG 0.426820 4_1:-20951955 Msa0539750:CDS
TGAGCAAAGCTGAAGATGCT+TGG 0.430166 4_1:-20948538 Msa0539750:CDS
TGAGCAAAGCTGAAGATGCT+TGG 0.430166 4_1:-20958265 Msa0539750:CDS
GGTGCGAGTTTACCTATTGC+CGG 0.430821 4_1:-20949073 Msa0539750:CDS
CTCTTCAGTGATGTTCCCTC+TGG 0.430862 4_1:+20948830 None:intergenic
ATTGACTTCGTTAAGAGCTT+AGG 0.432964 4_1:-20948881 Msa0539750:CDS
AGCCATAGTCTCAGTTTGCT+TGG 0.434330 4_1:-20948472 Msa0539750:exon
TAGGAGAGATCCGATTGATA+TGG 0.446191 4_1:-20960521 Msa0539750:exon
GCTTGGGCTAAGAGCATTGA+TGG 0.447628 4_1:-20958248 Msa0539750:CDS
GAGCAAAGCTGAAGATGCTT+GGG 0.448420 4_1:-20948537 Msa0539750:CDS
GAGCAAAGCTGAAGATGCTT+GGG 0.448420 4_1:-20958264 Msa0539750:CDS
CGCGTTGGATTTAAAAGAAA+CGG 0.448962 4_1:+20958362 None:intergenic
TCCTATGGTGGAGGTCCCTC+CGG 0.449971 4_1:-20960466 Msa0539750:CDS
GCAAAAGTCAACATTGAACT+TGG 0.454364 4_1:+20948695 None:intergenic
GCTTGGGCTAAGAGTATTGA+TGG 0.455624 4_1:-20948521 Msa0539750:CDS
CTAGCATCAACCCAGTTGAT+TGG 0.458227 4_1:-20953121 Msa0539750:CDS
TGGCGAGCAGAAGAATGTTC+TGG 0.458608 4_1:-20948996 Msa0539750:CDS
TGCTGCGACTTCAGATGGTC+TGG 0.465008 4_1:+20958829 None:intergenic
CGAGCTGTGAGACCGGCAAT+AGG 0.465576 4_1:+20949061 None:intergenic
GCAGGAGAGGTAGTAGAGAT+TGG 0.465867 4_1:-20951969 Msa0539750:CDS
GGTAATCATACAAGGAATGA+AGG 0.466036 4_1:+20960202 None:intergenic
TTAGTCTTTGGAGTTGGTAC+AGG 0.467397 4_1:+20953170 None:intergenic
GTCCACATTGATCTTGGGCC+AGG 0.467894 4_1:+20958428 None:intergenic
GCAGTTACCAAAATGTTCTT+GGG 0.470291 4_1:+20958716 None:intergenic
CGTGATGTGCTCACCCAAGT+TGG 0.471370 4_1:-20958767 Msa0539750:CDS
GGAATTAAGCTTGATGGGAC+TGG 0.474637 4_1:-20949016 Msa0539750:CDS
GCATCTTCAGCTTTGCTCAA+AGG 0.476004 4_1:+20948542 None:intergenic
GCATCTTCAGCTTTGCTCAA+AGG 0.476004 4_1:+20958269 None:intergenic
ATTGACCTTATCAAGAGCTT+AGG 0.477431 4_1:-20958608 Msa0539750:CDS
CACATCACGAGCTGTTTGAC+CGG 0.481715 4_1:+20958781 None:intergenic
TGGAGGTCCCTCCGGATTGA+AGG 0.483196 4_1:-20960458 Msa0539750:intron
CACCCACTGCTTCTTCGAAA+AGG 0.484295 4_1:+20958385 None:intergenic
GTCAACATTGAACTTGGGCC+AGG 0.489320 4_1:+20948701 None:intergenic
TTGGAGGAATTAAGCTTGAT+GGG 0.490626 4_1:-20949021 Msa0539750:CDS
CAAAAGTCCACATTGATCTT+GGG 0.491620 4_1:+20958423 None:intergenic
ACTGCTGCTTCAGGTGGTGT+AGG 0.492958 4_1:-20948971 Msa0539750:CDS
GGCGTCACGAGCTGTGAGAC+CGG 0.496182 4_1:+20949054 None:intergenic
ACTGCTGCTTCAGGTGGTGT+AGG 0.500776 4_1:-20958698 Msa0539750:intron
ACATCACTGAAGAGTCCATC+TGG 0.503456 4_1:-20948821 Msa0539750:CDS
CTGTTCAACTTGCCAAACTA+GGG 0.504458 4_1:-20948940 Msa0539750:CDS
GCAGTAATACATTGCACCAC+TGG 0.505627 4_1:-20948785 Msa0539750:CDS
CGAGCTGTTTGACCGGCTAC+AGG 0.510084 4_1:+20958788 None:intergenic
CGCTTAACAGTTACAACGAA+TGG 0.512764 4_1:+20948635 None:intergenic
GGAGTTAAGTTTGATGGGAC+TGG 0.514717 4_1:-20958743 Msa0539750:CDS
TCAGGAGAGGTTGTAGAGGT+TGG 0.519056 4_1:-20959408 Msa0539750:CDS
TGTTCCAAGCCCTCGCGCGT+TGG 0.522187 4_1:+20958347 None:intergenic
TCAGCTGCTGCGACTTCAGA+TGG 0.522293 4_1:+20958824 None:intergenic
GTTGTCGTGGATTTAACACC+TGG 0.523492 4_1:-20948719 Msa0539750:CDS
TGATGTGCTCACCCAAGTTG+GGG 0.526318 4_1:-20958765 Msa0539750:CDS
ACTTCATTAGTCTTTGGAGT+TGG 0.526413 4_1:+20953164 None:intergenic
GATTCAGGCACTGATGTAGC+AGG 0.527374 4_1:-20951987 Msa0539750:intron
AATTCCTCCAATTTCTGTCA+GGG 0.528728 4_1:+20949033 None:intergenic
CAATCGGATCTCTCCTATGT+TGG 0.530397 4_1:+20960527 None:intergenic
GTTGATTGGAAGATTCAGTC+TGG 0.533264 4_1:-20953107 Msa0539750:CDS
GCTTTAAAATCCTTAACTTG+TGG 0.540127 4_1:+20951945 None:intergenic
GATTCAGTCTGGTGCTCTAA+GGG 0.542295 4_1:-20953096 Msa0539750:CDS
AGTTTGGAAGCCATATCAAT+CGG 0.542778 4_1:+20960511 None:intergenic
GTCTGAAAATGGGGTTGTAG+CGG 0.543105 4_1:-20958459 Msa0539750:CDS
CTTGCTCAATTGGTGAAGGA+TGG 0.543386 4_1:-20958323 Msa0539750:CDS
GTAGTGATACATTGTACTGC+TGG 0.544263 4_1:-20958512 Msa0539750:CDS
CGGCACCTAAGCTCTTGATA+AGG 0.544444 4_1:+20958603 None:intergenic
TGTGATCATAACCTTCAATC+CGG 0.548603 4_1:+20960447 None:intergenic
GCAGTTCAATACGATTCCTA+TGG 0.549712 4_1:-20960481 Msa0539750:CDS
CCCTAATTTGTCTGAAAATG+GGG 0.555302 4_1:-20958468 Msa0539750:CDS
GTTGTAGCGGATATAACACC+TGG 0.555626 4_1:-20958446 Msa0539750:CDS
TTGGTAACTGCTGCTTCAGG+TGG 0.558002 4_1:-20958704 Msa0539750:CDS
TAACAAGTAATAACCAACAT+AGG 0.559412 4_1:-20960540 Msa0539750:five_prime_UTR
CTCGCTCAACTAGTGAAGGA+TGG 0.564162 4_1:-20948596 Msa0539750:CDS
GTTCAATACGATTCCTATGG+TGG 0.568230 4_1:-20960478 Msa0539750:CDS
GTAATCATACAAGGAATGAA+GGG 0.568950 4_1:+20960203 None:intergenic
GTTGTAACTGTTAAGCGTGA+GGG 0.570258 4_1:-20948629 Msa0539750:CDS
AGGTGGACTAGCTGAGTTTG+CGG 0.572988 4_1:-20958876 Msa0539750:CDS
CCTGAAGTCTCAGCTGCTGA+AGG 0.576984 4_1:-20949094 Msa0539750:CDS
CGTTGTAACTGTTAAGCGTG+AGG 0.578759 4_1:-20948630 Msa0539750:CDS
CTGGTAACTGCTGCTTCAGG+TGG 0.581845 4_1:-20948977 Msa0539750:CDS
CACCGCAAGTAGCTGTGACA+TGG 0.581923 4_1:+20958639 None:intergenic
ACTTTAAAATCGTTGACTTG+CGG 0.590534 4_1:+20959384 None:intergenic
GCTGCGAGTTTACCTGTAGC+CGG 0.590801 4_1:-20958800 Msa0539750:CDS
ACATCTCGCTCAACTAGTGA+AGG 0.592170 4_1:-20948600 Msa0539750:CDS
AGGCACTGATGTAGCAGGAG+AGG 0.593122 4_1:-20951982 Msa0539750:CDS
TGTGAATGACAGTATGGAGG+TGG 0.601090 4_1:-20949166 Msa0539750:intron
CGTGTTGAATGACAGTATGC+AGG 0.601722 4_1:-20958896 Msa0539750:intron
CAAAAGTCAACATTGAACTT+GGG 0.607885 4_1:+20948696 None:intergenic
CTTGTAGTCGAGAACCTCAT+CGG 0.608491 4_1:+20958583 None:intergenic
CTCGACTACAAGACTCCAGA+AGG 0.610447 4_1:-20958572 Msa0539750:CDS
GATTTAGAAATGATTTCATG+AGG 0.610493 4_1:-20948273 Msa0539750:three_prime_UTR
CAAGAGCTTAGGTGCCGATG+AGG 0.611847 4_1:-20958597 Msa0539750:CDS
ATCATAACCTTCAATCCGGA+GGG 0.613584 4_1:+20960451 None:intergenic
ACATCATATTTCCTACCAGA+AGG 0.616649 4_1:+20958533 None:intergenic
TAAGAGCTTAGGTGCTGACG+AGG 0.617355 4_1:-20948870 Msa0539750:CDS
TCCGGAGGGACCTCCACCAT+AGG 0.618671 4_1:+20960465 None:intergenic
CAATACGATTCCTATGGTGG+AGG 0.621130 4_1:-20960475 Msa0539750:CDS
AATGTTACGAGCACCACAAG+TGG 0.621983 4_1:+20948901 None:intergenic
AACCATGTCACAGCTACTTG+CGG 0.623077 4_1:-20958641 Msa0539750:CDS
CACCACAAGTGGCTGTCACG+TGG 0.628418 4_1:+20948912 None:intergenic
GACGCCCTGACAGAAATTGG+AGG 0.632009 4_1:-20949037 Msa0539750:CDS
TTTGAATCTTCCAATCAACT+GGG 0.637407 4_1:+20960261 None:intergenic
TGTGTCATACAAGGTATGTG+AGG 0.642683 4_1:+20953050 None:intergenic
ACATCTTGCTCAATTGGTGA+AGG 0.642706 4_1:-20958327 Msa0539750:CDS
TGTTAAGCTCTCGCTAGCCA+CGG 0.646494 4_1:+20949129 None:intergenic
TGGACTAGCTGAGTTTGCCG+TGG 0.647341 4_1:-20949146 Msa0539750:CDS
AACCACGTGACAGCCACTTG+TGG 0.652023 4_1:-20948914 Msa0539750:CDS
AATCACTCATCAAACAAGAG+AGG 0.654020 4_1:+20948292 None:intergenic
CTTGACTACAAAACTCCAGA+GGG 0.654718 4_1:-20948845 Msa0539750:CDS
GATGTGCTCACCCAAGTTGG+GGG 0.654755 4_1:-20958764 Msa0539750:CDS
TCAGCAGCTGAGACTTCAGG+TGG 0.657763 4_1:+20949097 None:intergenic
AGGCACTGATATATCAGGAG+AGG 0.660451 4_1:-20959421 Msa0539750:CDS
TGGACTAGCTGAGTTTGCGG+TGG 0.662431 4_1:-20958873 Msa0539750:CDS
ATTGTACTGCTGGAATACCA+TGG 0.663736 4_1:-20958502 Msa0539750:CDS
TTATGTGAATGACAGTATGG+AGG 0.672015 4_1:-20949169 Msa0539750:intron
TATATCAGGAGAGGTTGTAG+AGG 0.673713 4_1:-20959412 Msa0539750:CDS
ACTGAATCTTCCAATCAACT+GGG 0.677961 4_1:+20953111 None:intergenic
TCTTGACTACAAAACTCCAG+AGG 0.691725 4_1:-20948846 Msa0539750:CDS
GATCATAACCTTCAATCCGG+AGG 0.692191 4_1:+20960450 None:intergenic
AGTTGACCACGGTATTCCAG+TGG 0.695051 4_1:+20948769 None:intergenic
GTTGAATGACAGTATGCAGG+TGG 0.702738 4_1:-20958893 Msa0539750:intron
TTAGGATCAAAAGTTGACCA+CGG 0.710883 4_1:+20948758 None:intergenic
ATTGCACCACTGGAATACCG+TGG 0.745198 4_1:-20948775 Msa0539750:CDS
GTTGATTGGAAGATTCAAAG+CGG 0.757233 4_1:-20960257 Msa0539750:CDS
CACCTGGCCCAAGATCAATG+TGG 0.784417 4_1:-20958430 Msa0539750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAATTCAATTAAATTAT+TGG - chr4_1:20948395-20948414 Msa0539750:three_prime_UTR 10.0%
!! ATAATATAAATATAATCCTT+CGG + chr4_1:20949225-20949244 None:intergenic 10.0%
!!! ATATAATGATTCTATTTTTA+TGG - chr4_1:20950779-20950798 Msa0539750:intron 10.0%
!!! TATAATGATTCTATTTTTAT+GGG - chr4_1:20950780-20950799 Msa0539750:intron 10.0%
!! CCATATATTAAAAAAAATTA+AGG + chr4_1:20953176-20953195 None:intergenic 10.0%
!!! CCTTAATTTTTTTTAATATA+TGG - chr4_1:20953173-20953192 Msa0539750:CDS 10.0%
!!! TATTTTTTTACATAAAATCT+TGG - chr4_1:20953608-20953627 Msa0539750:intron 10.0%
!!! TTAGATATTATTAGATATTT+TGG - chr4_1:20954852-20954871 Msa0539750:intron 10.0%
!! ATTTAATTAAACTAAATCTT+TGG + chr4_1:20954900-20954919 None:intergenic 10.0%
!! AAATAAATTAAAATGATATG+TGG + chr4_1:20954956-20954975 None:intergenic 10.0%
!! GTTATTATTATTAAATATTG+TGG + chr4_1:20957761-20957780 None:intergenic 10.0%
!! ATAGAAATTAAAATATTGTT+TGG + chr4_1:20958317-20958336 None:intergenic 10.0%
!! TATGAAATAAAAAAAAAAGT+TGG + chr4_1:20959521-20959540 None:intergenic 10.0%
!! TAACATAGATTATAAACTTT+AGG - chr4_1:20948950-20948969 Msa0539750:CDS 15.0%
!! TTATATTGAAATGAATGATT+TGG - chr4_1:20950689-20950708 Msa0539750:intron 15.0%
!! TATATTGAAATGAATGATTT+GGG - chr4_1:20950690-20950709 Msa0539750:intron 15.0%
!!! TGCTTATATTATTACTTTTT+TGG - chr4_1:20951341-20951360 Msa0539750:intron 15.0%
!!! GCTTATATTATTACTTTTTT+GGG - chr4_1:20951342-20951361 Msa0539750:intron 15.0%
!! TAACATTATTGAATTATGAA+TGG + chr4_1:20951702-20951721 None:intergenic 15.0%
!! TTTATATGAATATATGTCTA+TGG + chr4_1:20952306-20952325 None:intergenic 15.0%
!! ACATATATTCATATAAAATG+CGG - chr4_1:20952309-20952328 Msa0539750:intron 15.0%
!!! TTGTCTTTTTATGTTTTATT+TGG + chr4_1:20952373-20952392 None:intergenic 15.0%
!! ATATAATGTTAGTGATATAT+TGG - chr4_1:20952399-20952418 Msa0539750:intron 15.0%
!!! GACTTTTTTTTTTTTTTTTC+AGG + chr4_1:20952845-20952864 None:intergenic 15.0%
!!! TTTTTTTCTAAAAACACTTA+TGG - chr4_1:20954099-20954118 Msa0539750:intron 15.0%
!!! TTTTTTCTAAAAACACTTAT+GGG - chr4_1:20954100-20954119 Msa0539750:intron 15.0%
!!! TATTGAATGAATCTAAAATA+TGG - chr4_1:20955264-20955283 Msa0539750:intron 15.0%
!! CAATCAAAGAAAAAAAATAT+AGG + chr4_1:20956607-20956626 None:intergenic 15.0%
!!! ATTATAAATATAGGTTGAAA+GGG + chr4_1:20957703-20957722 None:intergenic 15.0%
!!! AATTATAAATATAGGTTGAA+AGG + chr4_1:20957704-20957723 None:intergenic 15.0%
!! AATAAAAAAAAAAGTTGGAT+TGG + chr4_1:20959516-20959535 None:intergenic 15.0%
!! CATTTATATATTAATTACAC+TGG - chr4_1:20959543-20959562 Msa0539750:intron 15.0%
!! TAATTGAATTGAAATGCAAT+TGG + chr4_1:20948389-20948408 None:intergenic 20.0%
!!! TTTTTCTCTTAATCTTTGTT+TGG - chr4_1:20948592-20948611 Msa0539750:CDS 20.0%
!! CAATAATATTGAATTAGTTG+CGG + chr4_1:20948712-20948731 None:intergenic 20.0%
!!! TGAGTTTTGTTAACAATATA+AGG - chr4_1:20948869-20948888 Msa0539750:CDS 20.0%
!!! TATAAATTGTTTTCGTAAAC+TGG + chr4_1:20949098-20949117 None:intergenic 20.0%
!!! AATAGTTTGTATCCAATTTT+TGG - chr4_1:20949162-20949181 Msa0539750:intron 20.0%
!! AATTTATATATGAACCATTG+TGG - chr4_1:20950842-20950861 Msa0539750:intron 20.0%
!! ATTTATATATGAACCATTGT+GGG - chr4_1:20950843-20950862 Msa0539750:intron 20.0%
!!! TATACAATGCTATCATTTTT+AGG - chr4_1:20951279-20951298 Msa0539750:intron 20.0%
!!! ATTTTATCCACATAAATTGT+TGG - chr4_1:20952336-20952355 Msa0539750:intron 20.0%
!!! GGTGTTAATTTTTTTTTTGT+TGG + chr4_1:20952477-20952496 None:intergenic 20.0%
!! AAAATTAACACCAATAGAAA+AGG - chr4_1:20952485-20952504 Msa0539750:intron 20.0%
!! TATTATATTGAAGATGAAGA+AGG + chr4_1:20952570-20952589 None:intergenic 20.0%
!! TCTTCATCTTCAATATAATA+CGG - chr4_1:20952570-20952589 Msa0539750:intron 20.0%
!!! ATTTTTGGATAGACAATATT+TGG + chr4_1:20952666-20952685 None:intergenic 20.0%
!!! TACATCAGAATTTGAATTTT+TGG + chr4_1:20952681-20952700 None:intergenic 20.0%
!! ATTGAGAATATTTAGATTTG+AGG + chr4_1:20953031-20953050 None:intergenic 20.0%
!! TTAGAGAATTAGTAATAAGT+TGG - chr4_1:20953570-20953589 Msa0539750:intron 20.0%
!! TAGAGAATTAGTAATAAGTT+GGG - chr4_1:20953571-20953590 Msa0539750:intron 20.0%
!! TATATATAGGTGAACAATTT+GGG + chr4_1:20953985-20954004 None:intergenic 20.0%
!!! TGTAAGTTTAGTTTAATTCA+AGG - chr4_1:20954160-20954179 Msa0539750:intron 20.0%
!! TATCAAACAATCAAGATTTA+AGG - chr4_1:20954255-20954274 Msa0539750:intron 20.0%
!! ATCAAACAATCAAGATTTAA+GGG - chr4_1:20954256-20954275 Msa0539750:intron 20.0%
!! TAATCAAATAAAAGTTCGTT+TGG + chr4_1:20954467-20954486 None:intergenic 20.0%
!! ACAAGATTCCTTAAAAAAAT+GGG + chr4_1:20954826-20954845 None:intergenic 20.0%
!! AACAAGATTCCTTAAAAAAA+TGG + chr4_1:20954827-20954846 None:intergenic 20.0%
!! AATTAAAATGATATGTGGTT+TGG + chr4_1:20954951-20954970 None:intergenic 20.0%
!!! ATTTTAAAATATACATCCTC+CGG - chr4_1:20955156-20955175 Msa0539750:intron 20.0%
!! CATTTAATAAATGATGTATG+TGG - chr4_1:20955214-20955233 Msa0539750:intron 20.0%
!! TAATAATATAATACACCATC+CGG + chr4_1:20955310-20955329 None:intergenic 20.0%
!! ATCTGATTCAATTCAATTAT+TGG - chr4_1:20955543-20955562 Msa0539750:intron 20.0%
!!! TAATGAAGTTTTACTCAAAT+TGG - chr4_1:20955609-20955628 Msa0539750:intron 20.0%
!! AATTGAATTAACACAGATAA+TGG + chr4_1:20956914-20956933 None:intergenic 20.0%
!! TTGCAATATCAATAAAATGA+GGG + chr4_1:20957088-20957107 None:intergenic 20.0%
!! TTTGCAATATCAATAAAATG+AGG + chr4_1:20957089-20957108 None:intergenic 20.0%
!!! ATCAATATTTTGATATGTGA+TGG + chr4_1:20957117-20957136 None:intergenic 20.0%
!! TTTGTAATAAAATTGCATGA+TGG + chr4_1:20957422-20957441 None:intergenic 20.0%
!! GTATAATAATTATTAGTCAC+AGG + chr4_1:20957479-20957498 None:intergenic 20.0%
!!! GAATTTTAAACTCAAACAAA+TGG + chr4_1:20957595-20957614 None:intergenic 20.0%
!! GTAGTCTGAATTATAAATAT+AGG + chr4_1:20957712-20957731 None:intergenic 20.0%
!!! TTTTTGCTTATAAATAGGAA+TGG + chr4_1:20958017-20958036 None:intergenic 20.0%
!!! TTTTTTCTTATAGATAGGAA+CGG - chr4_1:20958104-20958123 Msa0539750:intron 20.0%
!! TTTCATATCTCCATAATTTA+GGG + chr4_1:20958584-20958603 None:intergenic 20.0%
!!! TTTTCATATCTCCATAATTT+AGG + chr4_1:20958585-20958604 None:intergenic 20.0%
!! TTTAAAAACTCGTTTATTTC+TGG + chr4_1:20958632-20958651 None:intergenic 20.0%
!!! TATAGATAGATTACTACTTT+TGG - chr4_1:20958887-20958906 Msa0539750:intron 20.0%
!!! TTTTAAGAATTAGATGGAAA+TGG - chr4_1:20959060-20959079 Msa0539750:intron 20.0%
!! ATTACTGTGTAATTAATAGA+AGG + chr4_1:20959231-20959250 None:intergenic 20.0%
!! AATTAACAGTATAAATCATG+TGG + chr4_1:20959381-20959400 None:intergenic 20.0%
!! TCATGTAGAAATGAATAATT+TGG - chr4_1:20960358-20960377 Msa0539750:intron 20.0%
!! ATTTAATATCTTACAGCATA+TGG + chr4_1:20960390-20960409 None:intergenic 20.0%
!! TAAACATTTCATTACCATAT+AGG + chr4_1:20960529-20960548 None:intergenic 20.0%
! TAACAAGTAATAACCAACAT+AGG - chr4_1:20948219-20948238 Msa0539750:three_prime_UTR 25.0%
!!! ATTAAAACTTCATTGGTCTT+TGG + chr4_1:20948454-20948473 None:intergenic 25.0%
! CACTTTGATTAAAACTTCAT+TGG + chr4_1:20948461-20948480 None:intergenic 25.0%
!!! CAATGAAGTTTTAATCAAAG+TGG - chr4_1:20948459-20948478 Msa0539750:three_prime_UTR 25.0%
! CGCAACTAATTCAATATTAT+TGG - chr4_1:20948710-20948729 Msa0539750:CDS 25.0%
! TTCAATATTATTGGATGCTT+TGG - chr4_1:20948719-20948738 Msa0539750:CDS 25.0%
! TCAATATTATTGGATGCTTT+GGG - chr4_1:20948720-20948739 Msa0539750:CDS 25.0%
! CTGAAAATTTCTTAGAGATA+GGG + chr4_1:20948781-20948800 None:intergenic 25.0%
! ACTGAAAATTTCTTAGAGAT+AGG + chr4_1:20948782-20948801 None:intergenic 25.0%
! AGATTATCCAAACAAACTAT+AGG - chr4_1:20948825-20948844 Msa0539750:CDS 25.0%
!!! CATATAACCTATAGTTTGTT+TGG + chr4_1:20948835-20948854 None:intergenic 25.0%
! AGTATAATCGTACCAAAAAT+TGG + chr4_1:20949177-20949196 None:intergenic 25.0%
! TTACTCTTCGGATATAATAA+AGG - chr4_1:20949289-20949308 Msa0539750:intron 25.0%
! CTTGAAATAACATAGATGAT+AGG + chr4_1:20949483-20949502 None:intergenic 25.0%
! ACGCATTTGATTATATTTAC+CGG - chr4_1:20950604-20950623 Msa0539750:intron 25.0%
!!! ATTCTATTTTTATGGGTGAT+GGG - chr4_1:20950787-20950806 Msa0539750:intron 25.0%
! TCAATAAATGCTTCAATTGT+GGG + chr4_1:20951050-20951069 None:intergenic 25.0%
! ATCAATAAATGCTTCAATTG+TGG + chr4_1:20951051-20951070 None:intergenic 25.0%
! TCCAAAAACAACAAATGAAT+TGG - chr4_1:20951070-20951089 Msa0539750:intron 25.0%
!!! TCCAATTCATTTGTTGTTTT+TGG + chr4_1:20951074-20951093 None:intergenic 25.0%
!! ATAAGCAAAACCAATTTTGA+TGG + chr4_1:20951328-20951347 None:intergenic 25.0%
!!! CAACACTTATTTTAGGATTT+AGG - chr4_1:20951565-20951584 Msa0539750:intron 25.0%
! ACAAATTCAACAACAATACT+CGG - chr4_1:20951653-20951672 Msa0539750:intron 25.0%
! TAGTTAATGCAATGTCAAAT+TGG + chr4_1:20951727-20951746 None:intergenic 25.0%
!!! CAGTTTGATTTTCATCAAAA+TGG - chr4_1:20952074-20952093 Msa0539750:intron 25.0%
! ATATATTGGCCAAAAAAATC+CGG - chr4_1:20952413-20952432 Msa0539750:intron 25.0%
!!! ATAATGTATCCGGATTTTTT+TGG + chr4_1:20952425-20952444 None:intergenic 25.0%
!!! ATGCATCAACATATTTTTTG+CGG + chr4_1:20952451-20952470 None:intergenic 25.0%
! GAAGAAACAATTTCACTAAT+AGG + chr4_1:20952519-20952538 None:intergenic 25.0%
! TCTTCAATATAATACGGAAT+TGG - chr4_1:20952576-20952595 Msa0539750:intron 25.0%
!!! GAGTTGATTTGATTCTTTTT+TGG - chr4_1:20952602-20952621 Msa0539750:intron 25.0%
!!! TCTACTTTTTCAATATCCAT+GGG - chr4_1:20952632-20952651 Msa0539750:intron 25.0%
! GAATTTCATTCAAAGATAAC+TGG + chr4_1:20952957-20952976 None:intergenic 25.0%
!! ATGAAATTCCACTACTATTT+TGG - chr4_1:20952968-20952987 Msa0539750:intron 25.0%
!! ATAAGTGTTTTACGAATCAT+AGG - chr4_1:20953080-20953099 Msa0539750:CDS 25.0%
! ATATATGGTTTCATGAACAA+AGG - chr4_1:20953188-20953207 Msa0539750:intron 25.0%
! TTAAGAGATTTAGATCAACA+AGG + chr4_1:20953515-20953534 None:intergenic 25.0%
! AACACAAGAGATTAAAAACA+AGG + chr4_1:20953552-20953571 None:intergenic 25.0%
! GATTCTAATCAAAATATGCA+GGG + chr4_1:20953665-20953684 None:intergenic 25.0%
! TGATTCTAATCAAAATATGC+AGG + chr4_1:20953666-20953685 None:intergenic 25.0%
! ATTTAAATCAGTCTACTTAC+AGG + chr4_1:20953789-20953808 None:intergenic 25.0%
! GATTTGAATCAATCTTCATT+TGG - chr4_1:20953821-20953840 Msa0539750:intron 25.0%
! CTATATATAGGTGAACAATT+TGG + chr4_1:20953986-20954005 None:intergenic 25.0%
! AATTGTTCACCTATATATAG+TGG - chr4_1:20953986-20954005 Msa0539750:intron 25.0%
! TCAATGAATGATAAAAAGAG+AGG + chr4_1:20954015-20954034 None:intergenic 25.0%
! CTCTTTCTACAAACTTATTT+AGG - chr4_1:20954068-20954087 Msa0539750:intron 25.0%
! ATTTGAGAACTAGATTGTTA+GGG - chr4_1:20954123-20954142 Msa0539750:intron 25.0%
! GTTTAATTCAAGGATATTGA+TGG - chr4_1:20954170-20954189 Msa0539750:intron 25.0%
! TCAAACAATCAAGATTTAAG+GGG - chr4_1:20954257-20954276 Msa0539750:intron 25.0%
! TTGAAATTGAATGAATCCTA+AGG + chr4_1:20954359-20954378 None:intergenic 25.0%
! TTAGGATTCATTCAATTTCA+AGG - chr4_1:20954358-20954377 Msa0539750:intron 25.0%
! GAAGACACAACAATTATATT+GGG + chr4_1:20954574-20954593 None:intergenic 25.0%
! AGAAGACACAACAATTATAT+TGG + chr4_1:20954575-20954594 None:intergenic 25.0%
! AACTATTGTATCATTCTAAG+TGG - chr4_1:20954736-20954755 Msa0539750:intron 25.0%
! TTCCTTAAAAAAATGGGAAA+CGG + chr4_1:20954820-20954839 None:intergenic 25.0%
!!! TTTTATTTCCTTCCACAAAT+CGG - chr4_1:20955011-20955030 Msa0539750:intron 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG + chr4_1:20955288-20955307 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - chr4_1:20955288-20955307 Msa0539750:intron 25.0%
!!! TTTTGAAAGAGATGAGAAAT+GGG + chr4_1:20955487-20955506 None:intergenic 25.0%
!!! AGTAAAACTTCATTAGTCTT+TGG + chr4_1:20955604-20955623 None:intergenic 25.0%
! AAACAACTTAAGATATGTTG+TGG - chr4_1:20955806-20955825 Msa0539750:intron 25.0%
! ACATCCAATAATATTTGGTT+TGG + chr4_1:20955991-20956010 None:intergenic 25.0%
! CAGAAACATCCAATAATATT+TGG + chr4_1:20955996-20956015 None:intergenic 25.0%
! CAAATATTATTGGATGTTTC+TGG - chr4_1:20955994-20956013 Msa0539750:intron 25.0%
!!! TTTTTCAAAACCGAATTGAT+CGG - chr4_1:20956059-20956078 Msa0539750:intron 25.0%
! TAAAAATAACTCAGAGATAG+AGG + chr4_1:20956096-20956115 None:intergenic 25.0%
! AATTAAGATTCCTTTGATCT+TGG - chr4_1:20956743-20956762 Msa0539750:intron 25.0%
! ATTAAGATTCCTTTGATCTT+GGG - chr4_1:20956744-20956763 Msa0539750:intron 25.0%
!! GATTTAGTTTCTTTACATAC+TGG + chr4_1:20957327-20957346 None:intergenic 25.0%
! TAAATCACTAATCTATAGCT+TGG - chr4_1:20957341-20957360 Msa0539750:intron 25.0%
!! CATGCAATTTTATTACAAAC+CGG - chr4_1:20957423-20957442 Msa0539750:intron 25.0%
! AATTATTAGTCACAGGAATA+AGG + chr4_1:20957472-20957491 None:intergenic 25.0%
!! TTTAAAATTCCTTTAGCAAG+AGG - chr4_1:20957605-20957624 Msa0539750:intron 25.0%
! TAAGCAGTTTATTAGTAATG+TGG + chr4_1:20957965-20957984 None:intergenic 25.0%
!!! ACTCGTTTTTGCTTATAAAT+AGG + chr4_1:20958022-20958041 None:intergenic 25.0%
! GATGTATTTGGTTAAAAATG+TGG + chr4_1:20958068-20958087 None:intergenic 25.0%
! TATAAGAAAAAACGAGTCAA+AGG + chr4_1:20958096-20958115 None:intergenic 25.0%
!!! ACTCGTTTTTTCTTATAGAT+AGG - chr4_1:20958099-20958118 Msa0539750:intron 25.0%
! TATCACTAGAAATAGAATCT+AGG - chr4_1:20958183-20958202 Msa0539750:intron 25.0%
! ATCACTAGAAATAGAATCTA+GGG - chr4_1:20958184-20958203 Msa0539750:intron 25.0%
! AAACCAAAATGATTCTTCTT+TGG - chr4_1:20958228-20958247 Msa0539750:CDS 25.0%
! AACCAAAATGATTCTTCTTT+GGG - chr4_1:20958229-20958248 Msa0539750:CDS 25.0%
! AAGATGATTGCATTTCAATT+TGG + chr4_1:20958276-20958295 None:intergenic 25.0%
! AAATTGAAATGCAATCATCT+TGG - chr4_1:20958275-20958294 Msa0539750:CDS 25.0%
!! TGTTTCTCCAACAAATTTTT+GGG - chr4_1:20958376-20958395 Msa0539750:CDS 25.0%
!!! CTTTTAGATTTGTTGATAAG+TGG + chr4_1:20958402-20958421 None:intergenic 25.0%
! CACTTATCAACAAATCTAAA+AGG - chr4_1:20958400-20958419 Msa0539750:intron 25.0%
! GGAGATATGAAAATTTCTTA+AGG - chr4_1:20958592-20958611 Msa0539750:CDS 25.0%
! CACTTAACACATGAAATTAA+CGG - chr4_1:20958767-20958786 Msa0539750:CDS 25.0%
!!! TGACAATATTTTGATAAGTC+AGG - chr4_1:20958801-20958820 Msa0539750:CDS 25.0%
!!! GACAATATTTTGATAAGTCA+GGG - chr4_1:20958802-20958821 Msa0539750:CDS 25.0%
! TTATCTATAAGTACCCAATT+TGG + chr4_1:20958860-20958879 None:intergenic 25.0%
!! TTGTTGATTGATTTACCAAT+TGG + chr4_1:20958913-20958932 None:intergenic 25.0%
!!! CTAAGGTTTTAAGAATTAGA+TGG - chr4_1:20959054-20959073 Msa0539750:intron 25.0%
! TAATCAAATCATACCTTTCT+AGG + chr4_1:20959119-20959138 None:intergenic 25.0%
! TGTGTAATTAATAGAAGGTA+AGG + chr4_1:20959226-20959245 None:intergenic 25.0%
! AATAACCTTCTCTTTAGTAA+AGG - chr4_1:20959306-20959325 Msa0539750:intron 25.0%
! TCATTCACATAACACAAAAT+TGG + chr4_1:20959582-20959601 None:intergenic 25.0%
! ATCCTAATTTGAGTGAAAAA+GGG - chr4_1:20960017-20960036 Msa0539750:intron 25.0%
! GATTTAGAAATGATTTCATG+AGG - chr4_1:20960486-20960505 Msa0539750:CDS 25.0%
TTTGAATCTTCCAATCAACT+GGG + chr4_1:20948501-20948520 None:intergenic 30.0%
! GAAATTTTCGTGGCAATAAA+GGG + chr4_1:20948537-20948556 None:intergenic 30.0%
GTAATCATACAAGGAATGAA+GGG + chr4_1:20948559-20948578 None:intergenic 30.0%
AGATTAAGAGAAAAAGAACG+TGG + chr4_1:20948587-20948606 None:intergenic 30.0%
! ATGCTTATGCTTGTTAACAA+AGG + chr4_1:20948643-20948662 None:intergenic 30.0%
!!! TTGAATTAGTTGCGGTTTTT+TGG + chr4_1:20948704-20948723 None:intergenic 30.0%
TTGGTACGATTATACTTATC+AGG - chr4_1:20949181-20949200 Msa0539750:intron 30.0%
TGGTACGATTATACTTATCA+GGG - chr4_1:20949182-20949201 Msa0539750:intron 30.0%
! TAATAAAGGTTCTTTTGCTC+TGG - chr4_1:20949303-20949322 Msa0539750:intron 30.0%
! AATAAAGGTTCTTTTGCTCT+GGG - chr4_1:20949304-20949323 Msa0539750:intron 30.0%
!! ACTTTAAAATCGTTGACTTG+CGG + chr4_1:20949378-20949397 None:intergenic 30.0%
!!! CAAGTCAACGATTTTAAAGT+TGG - chr4_1:20949378-20949397 Msa0539750:intron 30.0%
TGATAGAAAGAGATAAGTAC+TGG + chr4_1:20949432-20949451 None:intergenic 30.0%
TCTCTTTCTATCACTTCTTT+AGG - chr4_1:20949439-20949458 Msa0539750:intron 30.0%
AAATAACATGTACTCTTGCA+CGG - chr4_1:20949567-20949586 Msa0539750:intron 30.0%
ATGCACAGGTATAGAAAAAA+TGG - chr4_1:20949595-20949614 Msa0539750:intron 30.0%
ATTTCCTAATCCACAACTTT+AGG - chr4_1:20949755-20949774 Msa0539750:intron 30.0%
CAATTCAAAAAGAGATGGAT+TGG + chr4_1:20949796-20949815 None:intergenic 30.0%
ACATGCAATTCAAAAAGAGA+TGG + chr4_1:20949801-20949820 None:intergenic 30.0%
ATTCAACACGACAGAAAAAT+TGG + chr4_1:20949853-20949872 None:intergenic 30.0%
TTGTTCAACTTGCAAAACTA+GGG - chr4_1:20950092-20950111 Msa0539750:intron 30.0%
! ACCCTAATTTGTCTGAAAAT+GGG - chr4_1:20950290-20950309 Msa0539750:intron 30.0%
AAAAATCATTGTGGAGCAAT+AGG - chr4_1:20950546-20950565 Msa0539750:intron 30.0%
ATAATCAAATGCGTTAGTGT+CGG + chr4_1:20950598-20950617 None:intergenic 30.0%
! ATTTGGGATACATCATATGA+TGG - chr4_1:20950706-20950725 Msa0539750:intron 30.0%
CTTCTTTGATTCTTTCTTTC+TGG - chr4_1:20950749-20950768 Msa0539750:intron 30.0%
!!! GATTCTATTTTTATGGGTGA+TGG - chr4_1:20950786-20950805 Msa0539750:intron 30.0%
! GATCTTTTTGCTAACTAAAG+TGG - chr4_1:20950865-20950884 Msa0539750:intron 30.0%
ATGTTACATTTCCTTTGTGA+TGG + chr4_1:20950986-20951005 None:intergenic 30.0%
! GGAAACAATTGTTGTTATCA+AGG - chr4_1:20951091-20951110 Msa0539750:intron 30.0%
ATAACTCCAGCAAAAGAAAT+TGG + chr4_1:20951253-20951272 None:intergenic 30.0%
!! TCTTTTGCTGGAGTTATTTT+TGG - chr4_1:20951256-20951275 Msa0539750:intron 30.0%
! AGGACTTGTAATGTTTGTTT+TGG - chr4_1:20951299-20951318 Msa0539750:intron 30.0%
!! CAGTCAACAACACTTATTTT+AGG - chr4_1:20951558-20951577 Msa0539750:intron 30.0%
AGAGATTTGATGTCAAGTTA+CGG + chr4_1:20951862-20951881 None:intergenic 30.0%
ATTACAAGTGTCCAAATTGT+CGG + chr4_1:20951886-20951905 None:intergenic 30.0%
CTTGACATTCTTCATAATGA+TGG + chr4_1:20951974-20951993 None:intergenic 30.0%
TACCTATACAAATACATGAG+AGG - chr4_1:20952051-20952070 Msa0539750:intron 30.0%
!! TCTGATACAAAGCTTTAAAG+AGG + chr4_1:20952170-20952189 None:intergenic 30.0%
! AGAGTTTGAAGTAATAGAAG+AGG + chr4_1:20952544-20952563 None:intergenic 30.0%
!!! CTCTACTTTTTCAATATCCA+TGG - chr4_1:20952631-20952650 Msa0539750:intron 30.0%
!!! CTACTTTTTCAATATCCATG+GGG - chr4_1:20952633-20952652 Msa0539750:intron 30.0%
AATGTTTGCAGATTAAGTCA+AGG - chr4_1:20952783-20952802 Msa0539750:intron 30.0%
ATATGGGGTAAATTTGGATT+TGG - chr4_1:20953221-20953240 Msa0539750:intron 30.0%
TATGGGGTAAATTTGGATTT+GGG - chr4_1:20953222-20953241 Msa0539750:intron 30.0%
AGCATTTCAAGAAACGAAAT+TGG + chr4_1:20953390-20953409 None:intergenic 30.0%
!! ATAAGTTGGGTATGTTTTTC+TGG - chr4_1:20953584-20953603 Msa0539750:intron 30.0%
!!! TGGTTTTTTGAAAGCTTGAT+TGG - chr4_1:20953628-20953647 Msa0539750:intron 30.0%
TGAATTAGTGTTCATAGCAA+TGG - chr4_1:20953857-20953876 Msa0539750:intron 30.0%
GATTTGAGAACTAGATTGTT+AGG - chr4_1:20954122-20954141 Msa0539750:intron 30.0%
! TTTTACCTCCAAGAAAATTG+TGG - chr4_1:20954225-20954244 Msa0539750:intron 30.0%
TTTACCTCCAAGAAAATTGT+GGG - chr4_1:20954226-20954245 Msa0539750:intron 30.0%
! TTCTTTTGCAAGAAGTTTGA+AGG - chr4_1:20954308-20954327 Msa0539750:intron 30.0%
! TGAATGAATCCTAAGGTATT+CGG + chr4_1:20954352-20954371 None:intergenic 30.0%
ATTTCAAGGAGCTTGAAAAT+TGG - chr4_1:20954372-20954391 Msa0539750:intron 30.0%
GTTACATAGTGTAGAAGATT+TGG - chr4_1:20954408-20954427 Msa0539750:intron 30.0%
TTCTTGTGTGATTGAGTAAA+AGG - chr4_1:20954508-20954527 Msa0539750:intron 30.0%
TCCTTAAAAAAATGGGAAAC+GGG + chr4_1:20954819-20954838 None:intergenic 30.0%
!! AAATGATATGTGGTTTGGTT+TGG + chr4_1:20954946-20954965 None:intergenic 30.0%
AGATTTGATTGTTGTCTGTT+TGG + chr4_1:20955038-20955057 None:intergenic 30.0%
CAACAAAACAAAGAAGATTC+TGG - chr4_1:20955366-20955385 Msa0539750:intron 30.0%
! ATTCTGGAGAAAGTTAGATA+TGG - chr4_1:20955382-20955401 Msa0539750:intron 30.0%
!! CTTTTGAAAGAGATGAGAAA+TGG + chr4_1:20955488-20955507 None:intergenic 30.0%
AGCAAAAGTAAAAAAGAAGG+TGG + chr4_1:20955740-20955759 None:intergenic 30.0%
AACTTAAGATATGTTGTGGT+TGG - chr4_1:20955810-20955829 Msa0539750:intron 30.0%
CTAAACTAGTACATCCAAAT+TGG + chr4_1:20955898-20955917 None:intergenic 30.0%
! TGTACTAGTTTAGTTTCTTC+AGG - chr4_1:20955905-20955924 Msa0539750:intron 30.0%
CGTTCCAAACCAAATATTAT+TGG - chr4_1:20955984-20956003 Msa0539750:intron 30.0%
TGTGATACTAAGTTTCTGTT+TGG - chr4_1:20956244-20956263 Msa0539750:intron 30.0%
GTGATACTAAGTTTCTGTTT+GGG - chr4_1:20956245-20956264 Msa0539750:intron 30.0%
TTTGGATGTAGTGTTTATGA+GGG + chr4_1:20956446-20956465 None:intergenic 30.0%
TACATCCAAACATACCTTAA+AGG - chr4_1:20956456-20956475 Msa0539750:intron 30.0%
!! CTATTCCTTTAAGGTATGTT+TGG + chr4_1:20956464-20956483 None:intergenic 30.0%
TGTCATAAGCTATTCCTTTA+AGG + chr4_1:20956473-20956492 None:intergenic 30.0%
TATTGCAAGTAAAAGTGAGT+AGG + chr4_1:20956722-20956741 None:intergenic 30.0%
!! GCTTTAAAATCCTTAACTTG+TGG + chr4_1:20956817-20956836 None:intergenic 30.0%
!!! CAAGTTAAGGATTTTAAAGC+TGG - chr4_1:20956817-20956836 Msa0539750:intron 30.0%
TAATGGAAAACAGTAACCTA+AGG + chr4_1:20956897-20956916 None:intergenic 30.0%
TAATAACACATACCCTTTCA+CGG - chr4_1:20956993-20957012 Msa0539750:intron 30.0%
! GTTAGTTTCAGTCAGTTAAA+TGG - chr4_1:20957152-20957171 Msa0539750:intron 30.0%
GATTAAATCGATAAAACGCT+AGG - chr4_1:20957238-20957257 Msa0539750:intron 30.0%
AGACAACTGGAAATAGATAT+TGG + chr4_1:20957281-20957300 None:intergenic 30.0%
CAAATACTGTAATACTACGA+TGG + chr4_1:20957390-20957409 None:intergenic 30.0%
AATAAAGTTTACTGCCATGA+TGG - chr4_1:20957446-20957465 Msa0539750:intron 30.0%
! TCTTTTACCCACAAATGAAT+TGG + chr4_1:20957511-20957530 None:intergenic 30.0%
AAAAGATAAACTCAAAACCG+TGG - chr4_1:20957525-20957544 Msa0539750:intron 30.0%
TTCAACAGGTATAATAACCA+CGG + chr4_1:20957545-20957564 None:intergenic 30.0%
AATGGTAAAACCATGGTAAA+TGG + chr4_1:20957577-20957596 None:intergenic 30.0%
TCAAACAAATGGTAAAACCA+TGG + chr4_1:20957584-20957603 None:intergenic 30.0%
TACTTTAATCCTCTTGCTAA+AGG + chr4_1:20957617-20957636 None:intergenic 30.0%
GCAGTCTGAATTATAAATAC+AGG + chr4_1:20957656-20957675 None:intergenic 30.0%
! ATATAGGTTGAAAGGGAAAA+GGG + chr4_1:20957696-20957715 None:intergenic 30.0%
! AATATAGGTTGAAAGGGAAA+AGG + chr4_1:20957697-20957716 None:intergenic 30.0%
!! GTCAAAGAAGGTTGATATAT+TGG - chr4_1:20957937-20957956 Msa0539750:intron 30.0%
!! TCAAAGGAAGTTGATGTATT+TGG + chr4_1:20958080-20958099 None:intergenic 30.0%
!! GTGCTTAAGCTTTAAAATCT+AGG + chr4_1:20958351-20958370 None:intergenic 30.0%
!! AAAATTTGTTGGAGAAACAC+AGG + chr4_1:20958375-20958394 None:intergenic 30.0%
! GTGTTTCTCCAACAAATTTT+TGG - chr4_1:20958375-20958394 Msa0539750:CDS 30.0%
TAGTACACGTAAGAAAAAGT+CGG + chr4_1:20958686-20958705 None:intergenic 30.0%
CGTTAATTTCATGTGTTAAG+TGG + chr4_1:20958769-20958788 None:intergenic 30.0%
TTAACACATGAAATTAACGG+AGG - chr4_1:20958770-20958789 Msa0539750:CDS 30.0%
TAACACATGAAATTAACGGA+GGG - chr4_1:20958771-20958790 Msa0539750:CDS 30.0%
TGGTAAATCAATCAACAACA+TGG - chr4_1:20958915-20958934 Msa0539750:intron 30.0%
ATGTTAGACAGACAACAAAT+TGG + chr4_1:20958984-20959003 None:intergenic 30.0%
AAATCATACCTTTCTAGGTA+AGG + chr4_1:20959114-20959133 None:intergenic 30.0%
TTAATAGAAGGTAAGGTTAG+AGG + chr4_1:20959219-20959238 None:intergenic 30.0%
ATACACCTTTACTAAAGAGA+AGG + chr4_1:20959314-20959333 None:intergenic 30.0%
! AAAAAAGTTGGATTGGAGAT+AGG + chr4_1:20959509-20959528 None:intergenic 30.0%
GATCCTAATTTGAGTGAAAA+AGG - chr4_1:20960016-20960035 Msa0539750:intron 30.0%
TCCTAATTTGAGTGAAAAAG+GGG - chr4_1:20960018-20960037 Msa0539750:intron 30.0%
CAAAAGTCAACATTGAACTT+GGG + chr4_1:20960066-20960085 None:intergenic 30.0%
!!! AACTTACTTTTTCGAAGAAG+CGG - chr4_1:20960095-20960114 Msa0539750:intron 30.0%
ATTATGTAGCTGATCCTATA+TGG - chr4_1:20960512-20960531 Msa0539750:exon 30.0%
AGTTTGGAAGCCATATCAAT+CGG + chr4_1:20948251-20948270 None:intergenic 35.0%
TGTGATCATAACCTTCAATC+CGG + chr4_1:20948315-20948334 None:intergenic 35.0%
!! ACTTCATTGGTCTTTGGAAT+TGG + chr4_1:20948448-20948467 None:intergenic 35.0%
CTTTGAATCTTCCAATCAAC+TGG + chr4_1:20948502-20948521 None:intergenic 35.0%
GTTGATTGGAAGATTCAAAG+CGG - chr4_1:20948502-20948521 Msa0539750:CDS 35.0%
! GGAAATTTTCGTGGCAATAA+AGG + chr4_1:20948538-20948557 None:intergenic 35.0%
GGTAATCATACAAGGAATGA+AGG + chr4_1:20948560-20948579 None:intergenic 35.0%
!! GTGGATTAGGTAATCATACA+AGG + chr4_1:20948568-20948587 None:intergenic 35.0%
AGAGAAAAAGAACGTGGATT+AGG + chr4_1:20948581-20948600 None:intergenic 35.0%
!!! TTAGTTGCGGTTTTTTGGAT+CGG + chr4_1:20948699-20948718 None:intergenic 35.0%
! TTTCGTGCAATTTTCACCAA+AGG + chr4_1:20948749-20948768 None:intergenic 35.0%
AGAATAACAAAGAGACGACT+AGG - chr4_1:20948899-20948918 Msa0539750:CDS 35.0%
GAATAACAAAGAGACGACTA+GGG - chr4_1:20948900-20948919 Msa0539750:CDS 35.0%
GGGTTTCAATATTGTCTCAA+TGG - chr4_1:20948920-20948939 Msa0539750:CDS 35.0%
TGTTTGTGAGTCGTTGTATT+TGG - chr4_1:20949055-20949074 Msa0539750:CDS 35.0%
! TTATCAGGGTTTCTTTTCTC+TGG - chr4_1:20949196-20949215 Msa0539750:intron 35.0%
TTATATCCGAAGAGTAAGCA+TGG + chr4_1:20949286-20949305 None:intergenic 35.0%
! ATAAAGGTTCTTTTGCTCTG+GGG - chr4_1:20949305-20949324 Msa0539750:intron 35.0%
!! AAGTACTGGATTTGTGAGTT+TGG + chr4_1:20949418-20949437 None:intergenic 35.0%
TTTCAAATTCTGACGAGACA+TGG + chr4_1:20949645-20949664 None:intergenic 35.0%
TAGTCCTAAAGTTGTGGATT+AGG + chr4_1:20949762-20949781 None:intergenic 35.0%
!! AAAAGAGATGGATTGGAGAT+AGG + chr4_1:20949789-20949808 None:intergenic 35.0%
GCAGTTACCAAAATGTTCTT+GGG + chr4_1:20950046-20950065 None:intergenic 35.0%
AGCAGTTACCAAAATGTTCT+TGG + chr4_1:20950047-20950066 None:intergenic 35.0%
GTTGTTCAACTTGCAAAACT+AGG - chr4_1:20950091-20950110 Msa0539750:intron 35.0%
ATTGACCTTATCAAGAGCTT+AGG - chr4_1:20950151-20950170 Msa0539750:intron 35.0%
ACATCATATTTCCTACCAGA+AGG + chr4_1:20950229-20950248 None:intergenic 35.0%
! GACCCTAATTTGTCTGAAAA+TGG - chr4_1:20950289-20950308 Msa0539750:intron 35.0%
! CCCCATTTTCAGACAAATTA+GGG + chr4_1:20950294-20950313 None:intergenic 35.0%
! CCCTAATTTGTCTGAAAATG+GGG - chr4_1:20950291-20950310 Msa0539750:intron 35.0%
! ACCCCATTTTCAGACAAATT+AGG + chr4_1:20950295-20950314 None:intergenic 35.0%
CAAAAGTCCACATTGATCTT+GGG + chr4_1:20950339-20950358 None:intergenic 35.0%
! AAGATCAATGTGGACTTTTG+CGG - chr4_1:20950339-20950358 Msa0539750:intron 35.0%
CGCGTTGGATTTAAAAGAAA+CGG + chr4_1:20950400-20950419 None:intergenic 35.0%
! CAATGATTTTTCCAGTAGCA+TGG + chr4_1:20950537-20950556 None:intergenic 35.0%
TGCTACTGGAAAAATCATTG+TGG - chr4_1:20950537-20950556 Msa0539750:intron 35.0%
TTTCAATGTCTCGTCATAGT+CGG - chr4_1:20950635-20950654 Msa0539750:intron 35.0%
! GAAATAACTGACTTATGCTC+TGG - chr4_1:20950817-20950836 Msa0539750:intron 35.0%
TTAGCAAAAAGATCCCACAA+TGG + chr4_1:20950859-20950878 None:intergenic 35.0%
! CTTTGTGATGGAAGACTAAA+TGG + chr4_1:20950974-20950993 None:intergenic 35.0%
! CATTTAGTCTTCCATCACAA+AGG - chr4_1:20950972-20950991 Msa0539750:intron 35.0%
! TTGTCATGACCAATTTTGCA+AGG - chr4_1:20951143-20951162 Msa0539750:intron 35.0%
!!! AGAAGAGTTTTAGAAACCCT+GGG - chr4_1:20951177-20951196 Msa0539750:intron 35.0%
GCAAGTGTAGATTCATTCTT+TGG - chr4_1:20951222-20951241 Msa0539750:intron 35.0%
!! GTTTTGGTCACCATCAAAAT+TGG - chr4_1:20951315-20951334 Msa0539750:intron 35.0%
GAGTGACAATTAACTGTCAT+TGG + chr4_1:20951531-20951550 None:intergenic 35.0%
TTTAGGAACCAGACACAAAA+CGG - chr4_1:20951582-20951601 Msa0539750:intron 35.0%
!! GCTTCTAGAATTGAGTGTAT+GGG + chr4_1:20951627-20951646 None:intergenic 35.0%
!! TGCTTCTAGAATTGAGTGTA+TGG + chr4_1:20951628-20951647 None:intergenic 35.0%
TTCATCCGTCTAGAAAAACA+TGG - chr4_1:20951937-20951956 Msa0539750:CDS 35.0%
! AGCATCCATGTTTTTCTAGA+CGG + chr4_1:20951945-20951964 None:intergenic 35.0%
TGCCTCTCATGTATTTGTAT+AGG + chr4_1:20952056-20952075 None:intergenic 35.0%
! AACTCGTCCAACTTTTTGTT+GGG - chr4_1:20952124-20952143 Msa0539750:intron 35.0%
TTTAACCCCCAACAAAAAGT+TGG + chr4_1:20952134-20952153 None:intergenic 35.0%
!! AGCTTTAAAGAGGACGATTA+AGG + chr4_1:20952160-20952179 None:intergenic 35.0%
! CAAAGCACCAACAATTTATG+TGG + chr4_1:20952346-20952365 None:intergenic 35.0%
TTTGCGGTCTATAATGTATC+CGG + chr4_1:20952435-20952454 None:intergenic 35.0%
!! CACCAATAGAAAAGGTGTTA+AGG - chr4_1:20952493-20952512 Msa0539750:intron 35.0%
AAAGCTACACAAGAATGATG+AGG + chr4_1:20952708-20952727 None:intergenic 35.0%
! GTGTGAGTATTTGGGTTAAA+TGG - chr4_1:20952812-20952831 Msa0539750:intron 35.0%
! TGAGTATTTGGGTTAAATGG+TGG - chr4_1:20952815-20952834 Msa0539750:intron 35.0%
GCAACAATGTGACACATATT+CGG - chr4_1:20952922-20952941 Msa0539750:intron 35.0%
!! TTCCACTACTATTTTGGAGA+AGG - chr4_1:20952974-20952993 Msa0539750:intron 35.0%
TTCCTTCTCCAAAATAGTAG+TGG + chr4_1:20952979-20952998 None:intergenic 35.0%
! GCGATGTAATTGCAGATTTT+GGG + chr4_1:20953144-20953163 None:intergenic 35.0%
! TGCGATGTAATTGCAGATTT+TGG + chr4_1:20953145-20953164 None:intergenic 35.0%
TAGTCGAGTTCCAAATTTGT+GGG + chr4_1:20953293-20953312 None:intergenic 35.0%
CCAAAAAAGGTAAGAACCAA+GGG + chr4_1:20953358-20953377 None:intergenic 35.0%
TCCAAAAAAGGTAAGAACCA+AGG + chr4_1:20953359-20953378 None:intergenic 35.0%
!!! TTGGTTCTTACCTTTTTTGG+AGG - chr4_1:20953358-20953377 Msa0539750:intron 35.0%
TGCTAATTGTAGTTGCTTCT+TGG - chr4_1:20953406-20953425 Msa0539750:intron 35.0%
TCTCTCGAGTTTGTCATATA+AGG - chr4_1:20953691-20953710 Msa0539750:intron 35.0%
TTACCTCCAAGAAAATTGTG+GGG - chr4_1:20954227-20954246 Msa0539750:intron 35.0%
! AAACTACCCCACAATTTTCT+TGG + chr4_1:20954236-20954255 None:intergenic 35.0%
GATTTAAGGGGACTAAAATG+AGG - chr4_1:20954269-20954288 Msa0539750:intron 35.0%
AGTGTAGAAGATTTGGATTG+TGG - chr4_1:20954415-20954434 Msa0539750:intron 35.0%
! ATTGAGTAAAAGGAAGTGCA+AGG - chr4_1:20954518-20954537 Msa0539750:intron 35.0%
! TTGAGTAAAAGGAAGTGCAA+GGG - chr4_1:20954519-20954538 Msa0539750:intron 35.0%
!!! ACCCGTTTCCCATTTTTTTA+AGG - chr4_1:20954815-20954834 Msa0539750:intron 35.0%
!! ACTTCATTAGTCTTTGGAGT+TGG + chr4_1:20955598-20955617 None:intergenic 35.0%
ACTGAATCTTCCAATCAACT+GGG + chr4_1:20955651-20955670 None:intergenic 35.0%
GGCAGCAAAAGTAAAAAAGA+AGG + chr4_1:20955743-20955762 None:intergenic 35.0%
CGACAAGTGATTATGCTTAT+AGG + chr4_1:20955764-20955783 None:intergenic 35.0%
TTAAGATATGTTGTGGTTGG+TGG - chr4_1:20955813-20955832 Msa0539750:intron 35.0%
TAGTACATCCAAATTGGCAT+CGG + chr4_1:20955892-20955911 None:intergenic 35.0%
ATACTAAGTTTCTGTTTGGG+AGG - chr4_1:20956248-20956267 Msa0539750:intron 35.0%
TACTAAGTTTCTGTTTGGGA+GGG - chr4_1:20956249-20956268 Msa0539750:intron 35.0%
TGTAGTGTTTATGAGGGTAA+GGG + chr4_1:20956440-20956459 None:intergenic 35.0%
ATGTAGTGTTTATGAGGGTA+AGG + chr4_1:20956441-20956460 None:intergenic 35.0%
GTTTGGATGTAGTGTTTATG+AGG + chr4_1:20956447-20956466 None:intergenic 35.0%
GCTTATGACATGTCTAAGAA+TGG - chr4_1:20956483-20956502 Msa0539750:intron 35.0%
TCTCTTTCTTTCACTTCCTT+AGG - chr4_1:20956878-20956897 Msa0539750:intron 35.0%
AACTGACTGAAACTAACAGA+AGG + chr4_1:20957149-20957168 None:intergenic 35.0%
TGTCACGTTAAGTGATATTC+TGG - chr4_1:20957180-20957199 Msa0539750:intron 35.0%
TAGTACACGTAAGCAAAAGT+CGG - chr4_1:20957214-20957233 Msa0539750:intron 35.0%
TAAAAGAGGAAGAAGACAAC+TGG + chr4_1:20957294-20957313 None:intergenic 35.0%
ATACTACGATGGTACATTTC+TGG + chr4_1:20957379-20957398 None:intergenic 35.0%
CATGGCAGTAAACTTTATTC+CGG + chr4_1:20957445-20957464 None:intergenic 35.0%
CTTACCACCAATTCATTTGT+GGG - chr4_1:20957501-20957520 Msa0539750:intron 35.0%
TTTACCCACAAATGAATTGG+TGG + chr4_1:20957508-20957527 None:intergenic 35.0%
GGTTATTATACCTGTTGAAC+AGG - chr4_1:20957546-20957565 Msa0539750:intron 35.0%
TAACTGCTTGTAATTGCTGT+AGG + chr4_1:20957734-20957753 None:intergenic 35.0%
AATGGAGTATATCCATACCA+TGG + chr4_1:20957999-20958018 None:intergenic 35.0%
AAGCAAAAACGAGTCAAAGA+AGG - chr4_1:20958028-20958047 Msa0539750:intron 35.0%
TTTCTTATAGATAGGAACGG+AGG - chr4_1:20958107-20958126 Msa0539750:intron 35.0%
TTCTTATAGATAGGAACGGA+GGG - chr4_1:20958108-20958127 Msa0539750:intron 35.0%
CTGTTAGCATAGACATTGTA+TGG + chr4_1:20958155-20958174 None:intergenic 35.0%
! GACCCAAAGAAGAATCATTT+TGG + chr4_1:20958234-20958253 None:intergenic 35.0%
TAAGTGGCCCAAAAATTTGT+TGG + chr4_1:20958386-20958405 None:intergenic 35.0%
AAAAGACAAAGACTTGACTC+AGG - chr4_1:20958489-20958508 Msa0539750:CDS 35.0%
AGTACACGTAAGAAAAAGTC+GGG + chr4_1:20958685-20958704 None:intergenic 35.0%
!! GATTACTACTTTTGGCCAAT+TGG - chr4_1:20958895-20958914 Msa0539750:intron 35.0%
AATCAATCAACAACATGGAG+TGG - chr4_1:20958920-20958939 Msa0539750:intron 35.0%
AGACAACAAATTGGAATGGT+TGG + chr4_1:20958975-20958994 None:intergenic 35.0%
AGACAGACAACAAATTGGAA+TGG + chr4_1:20958979-20958998 None:intergenic 35.0%
AGGTAAGGCTAATCAAAACA+AGG + chr4_1:20959099-20959118 None:intergenic 35.0%
!! TTGATTAGCCTTACCTAGAA+AGG - chr4_1:20959103-20959122 Msa0539750:intron 35.0%
ACAAACTACATCTCCAAACA+AGG + chr4_1:20959151-20959170 None:intergenic 35.0%
ATATCTCGTGATCAATCATG+TGG + chr4_1:20959183-20959202 None:intergenic 35.0%
TGAACTTTCACAATCATGAG+GGG + chr4_1:20959266-20959285 None:intergenic 35.0%
CTGAACTTTCACAATCATGA+GGG + chr4_1:20959267-20959286 None:intergenic 35.0%
TCTGAACTTTCACAATCATG+AGG + chr4_1:20959268-20959287 None:intergenic 35.0%
GTGTTATGTGAATGACAGTA+TGG - chr4_1:20959587-20959606 Msa0539750:intron 35.0%
TTATGTGAATGACAGTATGG+AGG - chr4_1:20959590-20959609 Msa0539750:intron 35.0%
AATTCCTCCAATTTCTGTCA+GGG + chr4_1:20959729-20959748 None:intergenic 35.0%
TAATTCCTCCAATTTCTGTC+AGG + chr4_1:20959730-20959749 None:intergenic 35.0%
ATTGGAGGAATTAAGCTTGA+TGG - chr4_1:20959737-20959756 Msa0539750:intron 35.0%
TTGGAGGAATTAAGCTTGAT+GGG - chr4_1:20959738-20959757 Msa0539750:intron 35.0%
! ATTGACTTCGTTAAGAGCTT+AGG - chr4_1:20959878-20959897 Msa0539750:intron 35.0%
!!! GCATCGTATTTTTTACCAGA+TGG + chr4_1:20959956-20959975 None:intergenic 35.0%
TTAGGATCAAAAGTTGACCA+CGG + chr4_1:20960004-20960023 None:intergenic 35.0%
!! ACCCCTTTTTCACTCAAATT+AGG + chr4_1:20960022-20960041 None:intergenic 35.0%
GCAAAAGTCAACATTGAACT+TGG + chr4_1:20960067-20960086 None:intergenic 35.0%
! CAATGATTTTTCCAGTAGCA+TGG + chr4_1:20950537-20950556 None:intergenic 35.0%
AATCACTCATCAAACAAGAG+AGG + chr4_1:20960470-20960489 None:intergenic 35.0%
TAGGAGAGATCCGATTGATA+TGG - chr4_1:20948238-20948257 Msa0539750:three_prime_UTR 40.0%
TTGAACTGCATGCATGAGTT+TGG + chr4_1:20948267-20948286 None:intergenic 40.0%
GCAGTTCAATACGATTCCTA+TGG - chr4_1:20948278-20948297 Msa0539750:three_prime_UTR 40.0%
GTTCAATACGATTCCTATGG+TGG - chr4_1:20948281-20948300 Msa0539750:three_prime_UTR 40.0%
ATCATAACCTTCAATCCGGA+GGG + chr4_1:20948311-20948330 None:intergenic 40.0%
!! TTGGTCTTTGGAATTGGAAC+AGG + chr4_1:20948442-20948461 None:intergenic 40.0%
CAAGCATTAACCCAGTTGAT+TGG - chr4_1:20948488-20948507 Msa0539750:CDS 40.0%
! GGAATGAAGGGAAATTTTCG+TGG + chr4_1:20948547-20948566 None:intergenic 40.0%
!! TTCTTTTCTCTGGAAACCGA+AGG - chr4_1:20949206-20949225 Msa0539750:intron 40.0%
CTCATTCCATGCTTACTCTT+CGG - chr4_1:20949277-20949296 Msa0539750:intron 40.0%
!! GATTCAGGCACTGATATATC+AGG - chr4_1:20949333-20949352 Msa0539750:intron 40.0%
TATATCAGGAGAGGTTGTAG+AGG - chr4_1:20949347-20949366 Msa0539750:intron 40.0%
TATGCAGATGCCACATGATT+CGG - chr4_1:20949684-20949703 Msa0539750:intron 40.0%
GGAAATCTGCACAACAAGTA+GGG + chr4_1:20949741-20949760 None:intergenic 40.0%
AGGAAATCTGCACAACAAGT+AGG + chr4_1:20949742-20949761 None:intergenic 40.0%
GGATCATAGTCCTAAAGTTG+TGG + chr4_1:20949768-20949787 None:intergenic 40.0%
AAACTTAACTCCCCCAACTT+GGG + chr4_1:20950008-20950027 None:intergenic 40.0%
TTGGGGGAGTTAAGTTTGAT+GGG - chr4_1:20950011-20950030 Msa0539750:intron 40.0%
!! ATTTTGGTAACTGCTGCTTC+AGG - chr4_1:20950052-20950071 Msa0539750:intron 40.0%
GTAGTGATACATTGTACTGC+TGG - chr4_1:20950247-20950266 Msa0539750:intron 40.0%
ATTGTACTGCTGGAATACCA+TGG - chr4_1:20950257-20950276 Msa0539750:intron 40.0%
TTAGGGTCAAAAACTGACCA+TGG + chr4_1:20950277-20950296 None:intergenic 40.0%
GCAAAAGTCCACATTGATCT+TGG + chr4_1:20950340-20950359 None:intergenic 40.0%
! TTACCTTTTCGAAGAAGCAG+TGG - chr4_1:20950371-20950390 Msa0539750:intron 40.0%
! TACCTTTTCGAAGAAGCAGT+GGG - chr4_1:20950372-20950391 Msa0539750:intron 40.0%
CTTGGAACATCTTGCTCAAT+TGG - chr4_1:20950426-20950445 Msa0539750:intron 40.0%
ACATCTTGCTCAATTGGTGA+AGG - chr4_1:20950432-20950451 Msa0539750:intron 40.0%
AGCTTTGCTCAAAGGAAACT+TGG + chr4_1:20950485-20950504 None:intergenic 40.0%
!! TTTATGGGTGATGGGTGATT+TGG - chr4_1:20950795-20950814 Msa0539750:intron 40.0%
TTTGCTAACTAAAGTGGTCG+TGG - chr4_1:20950871-20950890 Msa0539750:intron 40.0%
TTGCTAACTAAAGTGGTCGT+GGG - chr4_1:20950872-20950891 Msa0539750:intron 40.0%
CATTTCCAAGGTCATATGGA+AGG + chr4_1:20950917-20950936 None:intergenic 40.0%
GAAGACTAAATGGCGTTTGA+GGG + chr4_1:20950964-20950983 None:intergenic 40.0%
GAGAATCGTTCATCTTGATG+AGG + chr4_1:20951028-20951047 None:intergenic 40.0%
TGTTATCAAGGTCAGAGTTG+CGG - chr4_1:20951103-20951122 Msa0539750:intron 40.0%
ATCGCACATCCTTGCAAAAT+TGG + chr4_1:20951155-20951174 None:intergenic 40.0%
!!! GAGAAGAGTTTTAGAAACCC+TGG - chr4_1:20951176-20951195 Msa0539750:intron 40.0%
! ATGAATCTACACTTGCTGAG+TGG + chr4_1:20951218-20951237 None:intergenic 40.0%
TCCAGCAAAAGAAATTGGTG+AGG + chr4_1:20951248-20951267 None:intergenic 40.0%
AGCGACAGTTTACTATCGTT+TGG - chr4_1:20951476-20951495 Msa0539750:intron 40.0%
! GAATTGAGTGTATGGGTTAC+AGG + chr4_1:20951620-20951639 None:intergenic 40.0%
TCAAATCTCTGCCGACAATT+TGG - chr4_1:20951872-20951891 Msa0539750:intron 40.0%
!!! GATGACAACTAGTTTTCCAG+AGG - chr4_1:20951993-20952012 Msa0539750:intron 40.0%
! CAACTCGTCCAACTTTTTGT+TGG - chr4_1:20952123-20952142 Msa0539750:intron 40.0%
! ACTCGTCCAACTTTTTGTTG+GGG - chr4_1:20952125-20952144 Msa0539750:intron 40.0%
TGTTAAGTGAGTCATGTCGT+AGG + chr4_1:20952214-20952233 None:intergenic 40.0%
! GGCCTTAACACCTTTTCTAT+TGG + chr4_1:20952498-20952517 None:intergenic 40.0%
ATATTTGGTATGAGACCCCA+TGG + chr4_1:20952651-20952670 None:intergenic 40.0%
!! CTTGTGTAGCTTTAACTCTG+CGG - chr4_1:20952715-20952734 Msa0539750:intron 40.0%
! TTTGGATTTGGGACTGAAGT+AGG - chr4_1:20953233-20953252 Msa0539750:intron 40.0%
TCAACATGCTCCCACAAATT+TGG - chr4_1:20953280-20953299 Msa0539750:intron 40.0%
CTAGTCGAGTTCCAAATTTG+TGG + chr4_1:20953294-20953313 None:intergenic 40.0%
AGTGAGATCTACACCAAATG+AGG + chr4_1:20953323-20953342 None:intergenic 40.0%
!!! CACTCTTTTTTTGACACCCT+TGG - chr4_1:20953339-20953358 Msa0539750:intron 40.0%
!!! CCCTTGGTTCTTACCTTTTT+TGG - chr4_1:20953355-20953374 Msa0539750:intron 40.0%
TACTTACAGGATAACCTGAG+GGG + chr4_1:20953776-20953795 None:intergenic 40.0%
CTACTTACAGGATAACCTGA+GGG + chr4_1:20953777-20953796 None:intergenic 40.0%
TCTACTTACAGGATAACCTG+AGG + chr4_1:20953778-20953797 None:intergenic 40.0%
GAGAGGAAGCCACTATATAT+AGG + chr4_1:20953998-20954017 None:intergenic 40.0%
! CTAGATTGTTAGGGTGTTAG+AGG - chr4_1:20954132-20954151 Msa0539750:intron 40.0%
! AATCCTAAGGTATTCGGATC+AGG + chr4_1:20954346-20954365 None:intergenic 40.0%
TCAAGGAGCTTGAAAATTGG+AGG - chr4_1:20954375-20954394 Msa0539750:intron 40.0%
! AGCTTGAAAATTGGAGGCAT+TGG - chr4_1:20954381-20954400 Msa0539750:intron 40.0%
! TGAGTAAAAGGAAGTGCAAG+GGG - chr4_1:20954520-20954539 Msa0539750:intron 40.0%
TTGCTTATATTTGTGACCGG+AGG + chr4_1:20955291-20955310 None:intergenic 40.0%
TGCTTATATTTGTGACCGGA+TGG - chr4_1:20955292-20955311 Msa0539750:intron 40.0%
!! TTAGTCTTTGGAGTTGGTAC+AGG + chr4_1:20955592-20955611 None:intergenic 40.0%
GACTGAATCTTCCAATCAAC+TGG + chr4_1:20955652-20955671 None:intergenic 40.0%
GTTGATTGGAAGATTCAGTC+TGG - chr4_1:20955652-20955671 Msa0539750:intron 40.0%
! GGTATGTGAGGAAATTTTCG+AGG + chr4_1:20955700-20955719 None:intergenic 40.0%
TGTGTCATACAAGGTATGTG+AGG + chr4_1:20955712-20955731 None:intergenic 40.0%
AGTACATCCAAATTGGCATC+GGG + chr4_1:20955891-20955910 None:intergenic 40.0%
TAGTGAAAAACCACGTGAAC+TGG - chr4_1:20956025-20956044 Msa0539750:intron 40.0%
! ATGAGATTGGCCGATCAATT+CGG + chr4_1:20956072-20956091 None:intergenic 40.0%
ACTAAGTTTCTGTTTGGGAG+GGG - chr4_1:20956250-20956269 Msa0539750:intron 40.0%
ATTCCTTTGATCTTGGGACT+TGG - chr4_1:20956750-20956769 Msa0539750:intron 40.0%
AATCCAAGTCCCAAGATCAA+AGG + chr4_1:20956756-20956775 None:intergenic 40.0%
AGAGATTGGACCACAAGTTA+AGG - chr4_1:20956804-20956823 Msa0539750:intron 40.0%
AGTACACGTAAGCAAAAGTC+GGG - chr4_1:20957215-20957234 Msa0539750:intron 40.0%
CTGGTTTCAGCGAATAAAAG+AGG + chr4_1:20957308-20957327 None:intergenic 40.0%
GCTTACCACCAATTCATTTG+TGG - chr4_1:20957500-20957519 Msa0539750:intron 40.0%
GAGAGAGAATGAGTCAAAGA+AGG - chr4_1:20957925-20957944 Msa0539750:intron 40.0%
! ACCATGGGAGTGTAAAGAAT+GGG + chr4_1:20958561-20958580 None:intergenic 40.0%
CTCCATAATTTAGGGACCAT+GGG + chr4_1:20958576-20958595 None:intergenic 40.0%
TCTCCATAATTTAGGGACCA+TGG + chr4_1:20958577-20958596 None:intergenic 40.0%
GTACACGTAAGAAAAAGTCG+GGG + chr4_1:20958684-20958703 None:intergenic 40.0%
ATGTCTGGTAGGGTCAAATA+AGG + chr4_1:20959007-20959026 None:intergenic 40.0%
TTATTTGACCCTACCAGACA+TGG - chr4_1:20959006-20959025 Msa0539750:intron 40.0%
TATTTGACCCTACCAGACAT+GGG - chr4_1:20959007-20959026 Msa0539750:intron 40.0%
ATTAACCTTCCCTCCTTGTT+TGG - chr4_1:20959135-20959154 Msa0539750:intron 40.0%
ACTACATCTCCAAACAAGGA+GGG + chr4_1:20959147-20959166 None:intergenic 40.0%
AACTACATCTCCAAACAAGG+AGG + chr4_1:20959148-20959167 None:intergenic 40.0%
TGCATATGTACCACATGTTG+GGG + chr4_1:20959442-20959461 None:intergenic 40.0%
GTGCATATGTACCACATGTT+GGG + chr4_1:20959443-20959462 None:intergenic 40.0%
AACATGTGGTACATATGCAC+CGG - chr4_1:20959443-20959462 Msa0539750:intron 40.0%
! ATATGCACCGGTAACATTGA+AGG - chr4_1:20959455-20959474 Msa0539750:intron 40.0%
TGGGAAACCTTCAATGTTAC+CGG + chr4_1:20959465-20959484 None:intergenic 40.0%
!! CAGTCATAGAGTAGTGGATT+GGG + chr4_1:20959484-20959503 None:intergenic 40.0%
!! TCAGTCATAGAGTAGTGGAT+TGG + chr4_1:20959485-20959504 None:intergenic 40.0%
TAGGATCAGTCATAGAGTAG+TGG + chr4_1:20959490-20959509 None:intergenic 40.0%
CTGTTCAACTTGCCAAACTA+GGG - chr4_1:20959819-20959838 Msa0539750:intron 40.0%
TCTTGACTACAAAACTCCAG+AGG - chr4_1:20959913-20959932 Msa0539750:intron 40.0%
CTTGACTACAAAACTCCAGA+GGG - chr4_1:20959914-20959933 Msa0539750:intron 40.0%
!!! TACTTTTTCGAAGAAGCGGT+TGG - chr4_1:20960099-20960118 Msa0539750:intron 40.0%
CGCTTAACAGTTACAACGAA+TGG + chr4_1:20960127-20960146 None:intergenic 40.0%
GTTGTAACTGTTAAGCGTGA+GGG - chr4_1:20960130-20960149 Msa0539750:intron 40.0%
CAATCGGATCTCTCCTATGT+TGG + chr4_1:20948235-20948254 None:intergenic 45.0%
CAATACGATTCCTATGGTGG+AGG - chr4_1:20948284-20948303 Msa0539750:three_prime_UTR 45.0%
GATCATAACCTTCAATCCGG+AGG + chr4_1:20948312-20948331 None:intergenic 45.0%
!! AGGCACTGATATATCAGGAG+AGG - chr4_1:20949338-20949357 Msa0539750:intron 45.0%
AACTGCTACACCGAATCATG+TGG + chr4_1:20949697-20949716 None:intergenic 45.0%
CGTGTTGAATGACAGTATGC+AGG - chr4_1:20949863-20949882 Msa0539750:intron 45.0%
GTTGAATGACAGTATGCAGG+TGG - chr4_1:20949866-20949885 Msa0539750:intron 45.0%
CAAACTTAACTCCCCCAACT+TGG + chr4_1:20950009-20950028 None:intergenic 45.0%
GTTGGGGGAGTTAAGTTTGA+TGG - chr4_1:20950010-20950029 Msa0539750:intron 45.0%
GGAGTTAAGTTTGATGGGAC+TGG - chr4_1:20950016-20950035 Msa0539750:intron 45.0%
! TGGTGAGCCCAAGAACATTT+TGG - chr4_1:20950036-20950055 Msa0539750:intron 45.0%
AACCATGTCACAGCTACTTG+CGG - chr4_1:20950118-20950137 Msa0539750:intron 45.0%
CTTGTAGTCGAGAACCTCAT+CGG + chr4_1:20950179-20950198 None:intergenic 45.0%
!! CTTTTTAGCGATGCTCCTTC+TGG + chr4_1:20950205-20950224 None:intergenic 45.0%
GCATCGCTAAAAAGTCCTTC+TGG - chr4_1:20950211-20950230 Msa0539750:intron 45.0%
CGCTAAAAAGTCCTTCTGGT+AGG - chr4_1:20950215-20950234 Msa0539750:intron 45.0%
GTCTGAAAATGGGGTTGTAG+CGG - chr4_1:20950300-20950319 Msa0539750:intron 45.0%
!! GTTGTAGCGGATATAACACC+TGG - chr4_1:20950313-20950332 Msa0539750:intron 45.0%
! TCTTTTAAATCCAACGCGCG+AGG - chr4_1:20950402-20950421 Msa0539750:intron 45.0%
! CTTTTAAATCCAACGCGCGA+GGG - chr4_1:20950403-20950422 Msa0539750:intron 45.0%
CTTGCTCAATTGGTGAAGGA+TGG - chr4_1:20950436-20950455 Msa0539750:intron 45.0%
GCATCTTCAGCTTTGCTCAA+AGG + chr4_1:20950493-20950512 None:intergenic 45.0%
TGAGCAAAGCTGAAGATGCT+TGG - chr4_1:20950494-20950513 Msa0539750:intron 45.0%
GAGCAAAGCTGAAGATGCTT+GGG - chr4_1:20950495-20950514 Msa0539750:intron 45.0%
!! AGCAATAGGCGCTGTTTTCT+TGG - chr4_1:20950560-20950579 Msa0539750:intron 45.0%
AGACATTGAAACATCGACGC+CGG + chr4_1:20950626-20950645 None:intergenic 45.0%
GGAATCCTTCCATATGACCT+TGG - chr4_1:20950909-20950928 Msa0539750:intron 45.0%
CGTGCATTTCCAAGGTCATA+TGG + chr4_1:20950921-20950940 None:intergenic 45.0%
TATGACCTTGGAAATGCACG+AGG - chr4_1:20950921-20950940 Msa0539750:intron 45.0%
GGAAGACTAAATGGCGTTTG+AGG + chr4_1:20950965-20950984 None:intergenic 45.0%
! TACACTTGCTGAGTGGATGA+GGG + chr4_1:20951211-20951230 None:intergenic 45.0%
! GCCTCACCAATTTCTTTTGC+TGG - chr4_1:20951244-20951263 Msa0539750:intron 45.0%
CGATAGTAAACTGTCGCTGA+AGG + chr4_1:20951474-20951493 None:intergenic 45.0%
TTGGAACCAACGACACTTGA+CGG + chr4_1:20951512-20951531 None:intergenic 45.0%
!! TAGACAAGCCGTTTTGTGTC+TGG + chr4_1:20951593-20951612 None:intergenic 45.0%
AGGATGTGGATAAAGACCTC+TGG + chr4_1:20952012-20952031 None:intergenic 45.0%
CGTACAACTAAGTGAGGATG+TGG + chr4_1:20952026-20952045 None:intergenic 45.0%
TCCTCACTTAGTTGTACGCA+TGG - chr4_1:20952028-20952047 Msa0539750:intron 45.0%
ACCATGCGTACAACTAAGTG+AGG + chr4_1:20952032-20952051 None:intergenic 45.0%
! CTCGTCCAACTTTTTGTTGG+GGG - chr4_1:20952126-20952145 Msa0539750:intron 45.0%
AGTCATGTCGTAGGATGAGA+TGG + chr4_1:20952205-20952224 None:intergenic 45.0%
! AGCTTTAACTCTGCGGACAA+TGG - chr4_1:20952722-20952741 Msa0539750:intron 45.0%
TTTAACTCTGCGGACAATGG+TGG - chr4_1:20952725-20952744 Msa0539750:intron 45.0%
ACTGAAGTAGGCCTTAGAAC+TGG - chr4_1:20953245-20953264 Msa0539750:intron 45.0%
CTACACCTTCTCCAGTTCTA+AGG + chr4_1:20953259-20953278 None:intergenic 45.0%
TTGGACTCGACCTCCAAAAA+AGG + chr4_1:20953371-20953390 None:intergenic 45.0%
TTCGAATCATTCATCCCCTC+AGG - chr4_1:20953759-20953778 Msa0539750:intron 45.0%
! CTACCCCACAATTTTCTTGG+AGG + chr4_1:20954233-20954252 None:intergenic 45.0%
TAGCCTGATCCGAATACCTT+AGG - chr4_1:20954340-20954359 Msa0539750:intron 45.0%
! GACTACTCTCGATTTGTGAG+AGG - chr4_1:20954547-20954566 Msa0539750:intron 45.0%
!! TGTTTGGACCGATTTGTGGA+AGG + chr4_1:20955022-20955041 None:intergenic 45.0%
!! TGTCTGTTTGGACCGATTTG+TGG + chr4_1:20955026-20955045 None:intergenic 45.0%
GCTCTTCAGTACAGTTCCTA+TGG - chr4_1:20955422-20955441 Msa0539750:intron 45.0%
CTTCAGTACAGTTCCTATGG+CGG - chr4_1:20955425-20955444 Msa0539750:intron 45.0%
CTAGCATCAACCCAGTTGAT+TGG - chr4_1:20955638-20955657 Msa0539750:intron 45.0%
AGATTCAGTCTGGTGCTCTA+AGG - chr4_1:20955662-20955681 Msa0539750:intron 45.0%
GATTCAGTCTGGTGCTCTAA+GGG - chr4_1:20955663-20955682 Msa0539750:intron 45.0%
GTGGATCAGTGTGTCATACA+AGG + chr4_1:20955721-20955740 None:intergenic 45.0%
! TCCAAATTGGCATCGGGAAA+CGG + chr4_1:20955885-20955904 None:intergenic 45.0%
AAACCACGTGAACTGGATTC+AGG - chr4_1:20956032-20956051 Msa0539750:intron 45.0%
! CAGAGATAGAGGCATGAGAT+TGG + chr4_1:20956085-20956104 None:intergenic 45.0%
CTAAGTTTCTGTTTGGGAGG+GGG - chr4_1:20956251-20956270 Msa0539750:intron 45.0%
TAAGTTTCTGTTTGGGAGGG+GGG - chr4_1:20956252-20956271 Msa0539750:intron 45.0%
TGTTTATGAGGGTAAGGGAC+GGG + chr4_1:20956435-20956454 None:intergenic 45.0%
GTGTTTATGAGGGTAAGGGA+CGG + chr4_1:20956436-20956455 None:intergenic 45.0%
TGATCTTGGGACTTGGATTC+AGG - chr4_1:20956757-20956776 Msa0539750:intron 45.0%
GTACACGTAAGCAAAAGTCG+GGG - chr4_1:20957216-20957235 Msa0539750:intron 45.0%
TCACAGGAATAAGGCCATCA+TGG + chr4_1:20957463-20957482 None:intergenic 45.0%
AATGGTGAGACCTGTTCAAC+AGG + chr4_1:20957559-20957578 None:intergenic 45.0%
ACAGGTCTCACCATTTACCA+TGG - chr4_1:20957564-20957583 Msa0539750:intron 45.0%
AGGTTGAAAGGGAAAAGGGA+GGG + chr4_1:20957692-20957711 None:intergenic 45.0%
! TAGGTTGAAAGGGAAAAGGG+AGG + chr4_1:20957693-20957712 None:intergenic 45.0%
TGCTTATCATAGACCAGCCA+TGG - chr4_1:20957979-20957998 Msa0539750:intron 45.0%
ATCATAGACCAGCCATGGTA+TGG - chr4_1:20957984-20958003 Msa0539750:intron 45.0%
GAGTATATCCATACCATGGC+TGG + chr4_1:20957995-20958014 None:intergenic 45.0%
! ATGGGAGTGTAAAGAATGGG+TGG + chr4_1:20958558-20958577 None:intergenic 45.0%
ACCCATTCTTTACACTCCCA+TGG - chr4_1:20958557-20958576 Msa0539750:CDS 45.0%
! GACCATGGGAGTGTAAAGAA+TGG + chr4_1:20958562-20958581 None:intergenic 45.0%
CTCCCATGGTCCCTAAATTA+TGG - chr4_1:20958571-20958590 Msa0539750:CDS 45.0%
! TCTGATTCGAGCGACCAAAT+TGG - chr4_1:20958843-20958862 Msa0539750:CDS 45.0%
! CTGATTCGAGCGACCAAATT+GGG - chr4_1:20958844-20958863 Msa0539750:CDS 45.0%
ATTTGACCCTACCAGACATG+GGG - chr4_1:20959008-20959027 Msa0539750:intron 45.0%
TTGTATCCCCATGTCTGGTA+GGG + chr4_1:20959017-20959036 None:intergenic 45.0%
TATGCTTGTATCCCCATGTC+TGG + chr4_1:20959022-20959041 None:intergenic 45.0%
GCATACACAGTGGTTGTCTA+AGG - chr4_1:20959037-20959056 Msa0539750:intron 45.0%
GGTGCATATGTACCACATGT+TGG + chr4_1:20959444-20959463 None:intergenic 45.0%
TGTGAATGACAGTATGGAGG+TGG - chr4_1:20959593-20959612 Msa0539750:intron 45.0%
GGAATTAAGCTTGATGGGAC+TGG - chr4_1:20959743-20959762 Msa0539750:intron 45.0%
GCTGTTCAACTTGCCAAACT+AGG - chr4_1:20959818-20959837 Msa0539750:intron 45.0%
AATGTTACGAGCACCACAAG+TGG + chr4_1:20959861-20959880 None:intergenic 45.0%
ACATCACTGAAGAGTCCATC+TGG - chr4_1:20959938-20959957 Msa0539750:intron 45.0%
GCAGTAATACATTGCACCAC+TGG - chr4_1:20959974-20959993 Msa0539750:intron 45.0%
GTTGTCGTGGATTTAACACC+TGG - chr4_1:20960040-20960059 Msa0539750:intron 45.0%
CGTTGTAACTGTTAAGCGTG+AGG - chr4_1:20960129-20960148 Msa0539750:intron 45.0%
ACATCTCGCTCAACTAGTGA+AGG - chr4_1:20960159-20960178 Msa0539750:intron 45.0%
GCATCTTCAGCTTTGCTCAA+AGG + chr4_1:20950493-20950512 None:intergenic 45.0%
TGAGCAAAGCTGAAGATGCT+TGG - chr4_1:20950494-20950513 Msa0539750:intron 45.0%
GAGCAAAGCTGAAGATGCTT+GGG - chr4_1:20950495-20950514 Msa0539750:intron 45.0%
!! GCTTGGGCTAAGAGTATTGA+TGG - chr4_1:20960238-20960257 Msa0539750:CDS 45.0%
!! AGTATTGATGGCCATGCTAC+TGG - chr4_1:20960250-20960269 Msa0539750:CDS 45.0%
! AGCCATAGTCTCAGTTTGCT+TGG - chr4_1:20960287-20960306 Msa0539750:CDS 45.0%
CACCAAGCAAACTGAGACTA+TGG + chr4_1:20960292-20960311 None:intergenic 45.0%
ATGTCCTGATTCTCTCTTGC+TGG - chr4_1:20960416-20960435 Msa0539750:intron 45.0%
CAAACCAGCAAGAGAGAATC+AGG + chr4_1:20960423-20960442 None:intergenic 45.0%
!!! TTTTATTTTATTCTTATATT+TGG + chr4_1:20952252-20952271 None:intergenic 5.0%
!!! TATTTTAAATATATCATTAA+TGG + chr4_1:20953006-20953025 None:intergenic 5.0%
!!! TCAAATTTTATATTTATAAA+AGG - chr4_1:20953727-20953746 Msa0539750:intron 5.0%
!!! CAAATTTTATATTTATAAAA+GGG - chr4_1:20953728-20953747 Msa0539750:intron 5.0%
!!! TATTAAATGAATTTAAAATA+TGG + chr4_1:20955203-20955222 None:intergenic 5.0%
!! TTATTATTATTAAATATTGT+GGG + chr4_1:20957760-20957779 None:intergenic 5.0%
! TGGATGCTTTGGGTCTCCTT+TGG - chr4_1:20948730-20948749 Msa0539750:CDS 50.0%
!! TGCTCTGGGGACTTTGATTC+AGG - chr4_1:20949318-20949337 Msa0539750:intron 50.0%
TCAGGAGAGGTTGTAGAGGT+TGG - chr4_1:20949351-20949370 Msa0539750:intron 50.0%
!! AGGTGGACTAGCTGAGTTTG+CGG - chr4_1:20949883-20949902 Msa0539750:intron 50.0%
CACATCACGAGCTGTTTGAC+CGG + chr4_1:20949981-20950000 None:intergenic 50.0%
GTGATGTGCTCACCCAAGTT+GGG - chr4_1:20949993-20950012 Msa0539750:intron 50.0%
TGATGTGCTCACCCAAGTTG+GGG - chr4_1:20949994-20950013 Msa0539750:intron 50.0%
! TTGGTAACTGCTGCTTCAGG+TGG - chr4_1:20950055-20950074 Msa0539750:intron 50.0%
CGGCACCTAAGCTCTTGATA+AGG + chr4_1:20950159-20950178 None:intergenic 50.0%
CTCGACTACAAGACTCCAGA+AGG - chr4_1:20950187-20950206 Msa0539750:intron 50.0%
CACCCACTGCTTCTTCGAAA+AGG + chr4_1:20950377-20950396 None:intergenic 50.0%
!! GCTTGGGCTAAGAGCATTGA+TGG - chr4_1:20950511-20950530 Msa0539750:intron 50.0%
!! AGCATTGATGGCCATGCTAC+TGG - chr4_1:20950523-20950542 Msa0539750:intron 50.0%
ATGGAAGGATTCCGTGGTGA+AGG + chr4_1:20950902-20950921 None:intergenic 50.0%
GGTCATATGGAAGGATTCCG+TGG + chr4_1:20950908-20950927 None:intergenic 50.0%
AGTTGCGGTTGTGGTCATTG+TGG - chr4_1:20951118-20951137 Msa0539750:intron 50.0%
! GATGAGGGATTGACTTCCCA+GGG + chr4_1:20951196-20951215 None:intergenic 50.0%
! CTACACTTGCTGAGTGGATG+AGG + chr4_1:20951212-20951231 None:intergenic 50.0%
CTGCGGACAATGGTGGTATT+TGG - chr4_1:20952732-20952751 Msa0539750:intron 50.0%
GCAGATTAAGTCAAGGCACG+TGG - chr4_1:20952790-20952809 Msa0539750:intron 50.0%
AGGCACGTGGTGTGAGTATT+TGG - chr4_1:20952803-20952822 Msa0539750:intron 50.0%
GGCACGTGGTGTGAGTATTT+GGG - chr4_1:20952804-20952823 Msa0539750:intron 50.0%
GTAGGCCTTAGAACTGGAGA+AGG - chr4_1:20953251-20953270 Msa0539750:intron 50.0%
! CGACTAGTCGAAGCCTCATT+TGG - chr4_1:20953307-20953326 Msa0539750:intron 50.0%
! TTGAGAAGGAGCACACTCGA+AGG + chr4_1:20955842-20955861 None:intergenic 50.0%
TTCGAGTGTGCTCCTTCTCA+AGG - chr4_1:20955841-20955860 Msa0539750:intron 50.0%
TCGAACCTGAGACCTTGAGA+AGG + chr4_1:20955856-20955875 None:intergenic 50.0%
! CCAAATTGGCATCGGGAAAC+GGG + chr4_1:20955884-20955903 None:intergenic 50.0%
GAACCTGAATCCAGTTCACG+TGG + chr4_1:20956038-20956057 None:intergenic 50.0%
!! GATTCAGGCACTGATGTAGC+AGG - chr4_1:20956772-20956791 Msa0539750:intron 50.0%
GCAGGAGAGGTAGTAGAGAT+TGG - chr4_1:20956790-20956809 Msa0539750:intron 50.0%
! TGCACATGAGCACCGTGAAA+GGG + chr4_1:20957008-20957027 None:intergenic 50.0%
! TTGCACATGAGCACCGTGAA+AGG + chr4_1:20957009-20957028 None:intergenic 50.0%
! AAAGGGAAAAGGGAGGGCAT+TGG + chr4_1:20957686-20957705 None:intergenic 50.0%
! TTGGGTCCATTTTGCGCATC+TGG - chr4_1:20958247-20958266 Msa0539750:CDS 50.0%
! TGGGTCCATTTTGCGCATCT+GGG - chr4_1:20958248-20958267 Msa0539750:CDS 50.0%
TGGTTCCCAGATGCGCAAAA+TGG + chr4_1:20958256-20958275 None:intergenic 50.0%
GGAGTGTAAAGAATGGGTGG+TGG + chr4_1:20958555-20958574 None:intergenic 50.0%
AACAACATGGAGTGGAGCTG+TGG - chr4_1:20958928-20958947 Msa0539750:intron 50.0%
CTTGTATCCCCATGTCTGGT+AGG + chr4_1:20959018-20959037 None:intergenic 50.0%
GGGGATACAAGCATACACAG+TGG - chr4_1:20959027-20959046 Msa0539750:intron 50.0%
CATCTCCAAACAAGGAGGGA+AGG + chr4_1:20959143-20959162 None:intergenic 50.0%
GTAAGGTTAGAGGCAGAGGA+AGG + chr4_1:20959209-20959228 None:intergenic 50.0%
GAAGGTAAGGTTAGAGGCAG+AGG + chr4_1:20959213-20959232 None:intergenic 50.0%
ATGCTCTTTGCCCCAACATG+TGG - chr4_1:20959429-20959448 Msa0539750:intron 50.0%
TGTTAAGCTCTCGCTAGCCA+CGG + chr4_1:20959633-20959652 None:intergenic 50.0%
GGTGCGAGTTTACCTATTGC+CGG - chr4_1:20959686-20959705 Msa0539750:intron 50.0%
TGGCGAGCAGAAGAATGTTC+TGG - chr4_1:20959763-20959782 Msa0539750:intron 50.0%
! GTTCTGGTAACTGCTGCTTC+AGG - chr4_1:20959779-20959798 Msa0539750:intron 50.0%
CACGTGGTTGTTCCCTAGTT+TGG + chr4_1:20959834-20959853 None:intergenic 50.0%
!! TAAGAGCTTAGGTGCTGACG+AGG - chr4_1:20959889-20959908 Msa0539750:intron 50.0%
CTCTTCAGTGATGTTCCCTC+TGG + chr4_1:20959932-20959951 None:intergenic 50.0%
ATTGCACCACTGGAATACCG+TGG - chr4_1:20959984-20960003 Msa0539750:intron 50.0%
AGTTGACCACGGTATTCCAG+TGG + chr4_1:20959993-20960012 None:intergenic 50.0%
GAGTGAAAAAGGGGTTGTCG+TGG - chr4_1:20960027-20960046 Msa0539750:intron 50.0%
GTCAACATTGAACTTGGGCC+AGG + chr4_1:20960061-20960080 None:intergenic 50.0%
AACTGTTAAGCGTGAGGGCT+TGG - chr4_1:20960135-20960154 Msa0539750:intron 50.0%
CTCGCTCAACTAGTGAAGGA+TGG - chr4_1:20960163-20960182 Msa0539750:intron 50.0%
!! TGGACTAGCTGAGTTTGCGG+TGG - chr4_1:20949886-20949905 Msa0539750:intron 55.0%
TGCTGCGACTTCAGATGGTC+TGG + chr4_1:20949933-20949952 None:intergenic 55.0%
TCAGCTGCTGCGACTTCAGA+TGG + chr4_1:20949938-20949957 None:intergenic 55.0%
GCTGCGAGTTTACCTGTAGC+CGG - chr4_1:20949959-20949978 Msa0539750:intron 55.0%
CGTGATGTGCTCACCCAAGT+TGG - chr4_1:20949992-20950011 Msa0539750:intron 55.0%
! GATGTGCTCACCCAAGTTGG+GGG - chr4_1:20949995-20950014 Msa0539750:intron 55.0%
! ACTGCTGCTTCAGGTGGTGT+AGG - chr4_1:20950061-20950080 Msa0539750:intron 55.0%
CACCGCAAGTAGCTGTGACA+TGG + chr4_1:20950123-20950142 None:intergenic 55.0%
!! CAAGAGCTTAGGTGCCGATG+AGG - chr4_1:20950162-20950181 Msa0539750:intron 55.0%
CACCTGGCCCAAGATCAATG+TGG - chr4_1:20950329-20950348 Msa0539750:intron 55.0%
GTCCACATTGATCTTGGGCC+AGG + chr4_1:20950334-20950353 None:intergenic 55.0%
TCGTGGGATCTCCTTCACCA+CGG - chr4_1:20950888-20950907 Msa0539750:intron 55.0%
GACCTTGGAAATGCACGAGG+AGG - chr4_1:20950924-20950943 Msa0539750:intron 55.0%
TGCCTCCTCGTGCATTTCCA+AGG + chr4_1:20950929-20950948 None:intergenic 55.0%
CAAGGTCAGAGTTGCGGTTG+TGG - chr4_1:20951109-20951128 Msa0539750:intron 55.0%
! GGATGAGGGATTGACTTCCC+AGG + chr4_1:20951197-20951216 None:intergenic 55.0%
CAACGACACTTGACGGTCGT+TGG + chr4_1:20951505-20951524 None:intergenic 55.0%
! CAACGACCGTCAAGTGTCGT+TGG - chr4_1:20951503-20951522 Msa0539750:intron 55.0%
CAGTACAGTTCCTATGGCGG+AGG - chr4_1:20955428-20955447 Msa0539750:intron 55.0%
CGGAGGAGTCTCTGGATTGA+AGG - chr4_1:20955445-20955464 Msa0539750:intron 55.0%
GTGCTCCTTCTCAAGGTCTC+AGG - chr4_1:20955848-20955867 Msa0539750:intron 55.0%
CCCGTTTCCCGATGCCAATT+TGG - chr4_1:20955881-20955900 Msa0539750:intron 55.0%
! TCTGTTTGGGAGGGGGGTTT+TGG - chr4_1:20956258-20956277 Msa0539750:intron 55.0%
!!! TTTGGGAGGGGGGTTTTGGA+GGG - chr4_1:20956262-20956281 Msa0539750:intron 55.0%
TATGAGGGTAAGGGACGGGA+GGG + chr4_1:20956431-20956450 None:intergenic 55.0%
TTATGAGGGTAAGGGACGGG+AGG + chr4_1:20956432-20956451 None:intergenic 55.0%
!! AGGCACTGATGTAGCAGGAG+AGG - chr4_1:20956777-20956796 Msa0539750:intron 55.0%
AACATGGAGTGGAGCTGTGG+AGG - chr4_1:20958931-20958950 Msa0539750:intron 55.0%
!! TGGACTAGCTGAGTTTGCCG+TGG - chr4_1:20959613-20959632 Msa0539750:intron 55.0%
AGCTGAGACTTCAGGTGGTC+TGG + chr4_1:20959660-20959679 None:intergenic 55.0%
TCAGCAGCTGAGACTTCAGG+TGG + chr4_1:20959665-20959684 None:intergenic 55.0%
CCTTCAGCAGCTGAGACTTC+AGG + chr4_1:20959668-20959687 None:intergenic 55.0%
CCTGAAGTCTCAGCTGCTGA+AGG - chr4_1:20959665-20959684 Msa0539750:intron 55.0%
CGTGACGCCCTGACAGAAAT+TGG - chr4_1:20959719-20959738 Msa0539750:intron 55.0%
GACGCCCTGACAGAAATTGG+AGG - chr4_1:20959722-20959741 Msa0539750:intron 55.0%
! CTGGTAACTGCTGCTTCAGG+TGG - chr4_1:20959782-20959801 Msa0539750:intron 55.0%
! ACTGCTGCTTCAGGTGGTGT+AGG - chr4_1:20950061-20950080 Msa0539750:intron 55.0%
AACCACGTGACAGCCACTTG+TGG - chr4_1:20959845-20959864 Msa0539750:intron 55.0%
! TCCTATGGTGGAGGTCCCTC+CGG - chr4_1:20948293-20948312 Msa0539750:three_prime_UTR 60.0%
TGGAGGTCCCTCCGGATTGA+AGG - chr4_1:20948301-20948320 Msa0539750:three_prime_UTR 60.0%
CTTGCACGGTGCTCATGCAC+AGG - chr4_1:20949581-20949600 Msa0539750:intron 60.0%
CGAGCTGTTTGACCGGCTAC+AGG + chr4_1:20949974-20949993 None:intergenic 60.0%
AAATCCAACGCGCGAGGGCT+TGG - chr4_1:20950408-20950427 Msa0539750:intron 60.0%
! TCCTATGGCGGAGGAGTCTC+TGG - chr4_1:20955437-20955456 Msa0539750:intron 60.0%
TCCAGAGACTCCTCCGCCAT+AGG + chr4_1:20955441-20955460 None:intergenic 60.0%
!! GTTTGGGAGGGGGGTTTTGG+AGG - chr4_1:20956261-20956280 Msa0539750:intron 60.0%
CGAGCTGTGAGACCGGCAAT+AGG + chr4_1:20959701-20959720 None:intergenic 60.0%
CACCACAAGTGGCTGTCACG+TGG + chr4_1:20959850-20959869 None:intergenic 60.0%
TCCGGAGGGACCTCCACCAT+AGG + chr4_1:20948297-20948316 None:intergenic 65.0%
TGTTCCAAGCCCTCGCGCGT+TGG + chr4_1:20950415-20950434 None:intergenic 65.0%
GGCGTCACGAGCTGTGAGAC+CGG + chr4_1:20959708-20959727 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 20948219 20960562 20948219 ID=Msa0539750;Name=Msa0539750
chr4_1 mRNA 20948219 20960562 20948219 ID=Msa0539750-mRNA-1;Parent=Msa0539750;Name=Msa0539750-mRNA-1;_AED=0.25;_eAED=0.25;_QI=38|0.25|0.33|1|0.62|0.66|9|268|622
chr4_1 exon 20948219 20949176 20948219 ID=Msa0539750-mRNA-1:exon:5995;Parent=Msa0539750-mRNA-1
chr4_1 exon 20951911 20952002 20951911 ID=Msa0539750-mRNA-1:exon:5994;Parent=Msa0539750-mRNA-1
chr4_1 exon 20953060 20953204 20953060 ID=Msa0539750-mRNA-1:exon:5993;Parent=Msa0539750-mRNA-1
chr4_1 exon 20958226 20958414 20958226 ID=Msa0539750-mRNA-1:exon:5992;Parent=Msa0539750-mRNA-1
chr4_1 exon 20958421 20958668 20958421 ID=Msa0539750-mRNA-1:exon:5991;Parent=Msa0539750-mRNA-1
chr4_1 exon 20958699 20958903 20958699 ID=Msa0539750-mRNA-1:exon:5990;Parent=Msa0539750-mRNA-1
chr4_1 exon 20959350 20959441 20959350 ID=Msa0539750-mRNA-1:exon:5989;Parent=Msa0539750-mRNA-1
chr4_1 exon 20960213 20960354 20960213 ID=Msa0539750-mRNA-1:exon:5988;Parent=Msa0539750-mRNA-1
chr4_1 exon 20960459 20960562 20960459 ID=Msa0539750-mRNA-1:exon:5987;Parent=Msa0539750-mRNA-1
chr4_1 five_prime_UTR 20960525 20960562 20960525 ID=Msa0539750-mRNA-1:five_prime_utr;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20960459 20960524 20960459 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20960213 20960354 20960213 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20959350 20959441 20959350 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20958699 20958903 20958699 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20958421 20958668 20958421 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20958226 20958414 20958226 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20953060 20953204 20953060 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20951911 20952002 20951911 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 CDS 20948487 20949176 20948487 ID=Msa0539750-mRNA-1:cds;Parent=Msa0539750-mRNA-1
chr4_1 three_prime_UTR 20948219 20948486 20948219 ID=Msa0539750-mRNA-1:three_prime_utr;Parent=Msa0539750-mRNA-1
Gene Sequence

>Msa0539750

ATGGCTTCCAAACTCATGCATGCAGTTCAATACGATTCCTATGGTGGAGGTCCCTCCGGATTGAAGCATGTTGAAGTTCCTGTTCCAATTCCAAAGACCAATGAAGTTTTAATCAAAGTGGAAGCAACAAGCATTAACCCAGTTGATTGGAAGATTCAAAGCGGTCTTCTTCGCCCTTTATTGCCACGAAAATTTCCCTTCATTCCTTGCACTGATATATCAGGAGAGGTTGTAGAGGTTGGACCGCAAGTCAACGATTTTAAAGTTGGAGACAAAGTTATTACCAAACTCACAAATCCATATGCAGGTGGACTAGCTGAGTTTGCGGTGGCTGCTGAGAGCTCAACAGCTGCCAGACCATCTGAAGTCGCAGCAGCTGAAGCTGCGAGTTTACCTGTAGCCGGTCAAACAGCTCGTGATGTGCTCACCCAAGTTGGGGGAGTTAAGTTTGATGGGACTGGTGAGCCCAAGAACATTTTGGTAACTGCTGCTTCAGGTGGTGTAGGGAACAACCATGTCACAGCTACTTGCGGTGCTCGTAACATTGACCTTATCAAGAGCTTAGGTGCCGATGAGGTTCTCGACTACAAGACTCCAGAAGGAGCATCGCTAAAAAGTCCTTCTGGTAGGAAATATGATGTAGTGATACATTGTACTGCTGGAATACCATGGTCAGTTTTTGACCCTAATTTGTCTGAAAATGGGGTTGTAGCGGATATAACACCTGGCCCAAGATCAATGTGGACTTTTGCGAAACTTACCTTTTCGAAGAAGCAGTGGGTGCCGTTTCTTTTAAATCCAACGCGCGAGGGCTTGGAACATCTTGCTCAATTGGTGAAGGATGGAAAACTCAAAACAATTATTGACTCCAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCTACTGGAAAAATCATTCATGTTGAAGTTCCTGTACCAACTCCAAAGACTAATGAAGTTTTACTCAAATTGGAAGCAACTAGCATCAACCCAGTTGATTGGAAGATTCAGTCTGGTGCTCTAAGGGCTATCTTTTTGCCTCGAAAATTTCCTCACATACCTTGCACTGATGTAGCAGGAGAGGTAGTAGAGATTGGACCACAAGTTAAGGATTTTAAAGCTGGCGACAAAGTTATTGCTAAACTCACACATCAATATGGAGGTGGACTAGCTGAGTTTGCCGTGGCTAGCGAGAGCTTAACAGCTGCCAGACCACCTGAAGTCTCAGCTGCTGAAGGTGCGAGTTTACCTATTGCCGGTCTCACAGCTCGTGACGCCCTGACAGAAATTGGAGGAATTAAGCTTGATGGGACTGGCGAGCAGAAGAATGTTCTGGTAACTGCTGCTTCAGGTGGTGTAGGTTCATTTGCTGTTCAACTTGCCAAACTAGGGAACAACCACGTGACAGCCACTTGTGGTGCTCGTAACATTGACTTCGTTAAGAGCTTAGGTGCTGACGAGGTTCTTGACTACAAAACTCCAGAGGGAACATCACTGAAGAGTCCATCTGGTAAAAAATACGATGCAGTAATACATTGCACCACTGGAATACCGTGGTCAACTTTTGATCCTAATTTGAGTGAAAAAGGGGTTGTCGTGGATTTAACACCTGGCCCAAGTTCAATGTTGACTTTTGCACTGAAGAAACTTACTTTTTCGAAGAAGCGGTTGGTGCCATTCGTTGTAACTGTTAAGCGTGAGGGCTTGGAACATCTCGCTCAACTAGTGAAGGATGGAAAACTCAAGACAATTATCGACTCAAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGTATTGATGGCCATGCTACTGGAAAAATCATTGTTGAGCCATAG
Protein sequence

>Msa0539750

MASKLMHAVQYDSYGGGPSGLKHVEVPVPIPKTNEVLIKVEATSINPVDWKIQSGLLRPLLPRKFPFIPCTDISGEVVEVGPQVNDFKVGDKVITKLTNPYAGGLAEFAVAAESSTAARPSEVAAAEAASLPVAGQTARDVLTQVGGVKFDGTGEPKNILVTAASGGVGNNHVTATCGARNIDLIKSLGADEVLDYKTPEGASLKSPSGRKYDVVIHCTAGIPWSVFDPNLSENGVVADITPGPRSMWTFAKLTFSKKQWVPFLLNPTREGLEHLAQLVKDGKLKTIIDSKFPLSKAEDAWAKSIDGHATGKIIHVEVPVPTPKTNEVLLKLEATSINPVDWKIQSGALRAIFLPRKFPHIPCTDVAGEVVEIGPQVKDFKAGDKVIAKLTHQYGGGLAEFAVASESLTAARPPEVSAAEGASLPIAGLTARDALTEIGGIKLDGTGEQKNVLVTAASGGVGSFAVQLAKLGNNHVTATCGARNIDFVKSLGADEVLDYKTPEGTSLKSPSGKKYDAVIHCTTGIPWSTFDPNLSEKGVVVDLTPGPSSMLTFALKKLTFSKKRLVPFVVTVKREGLEHLAQLVKDGKLKTIIDSKFPLSKAEDAWAKSIDGHATGKIIVEP*