Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602870 | XP_003607149.1 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602870 | sp|Q6K508|GLUD1_ORYSJ | 26.330 | 376 | 201 | 9 | 48 | 350 | 85 | 457 | 2.34e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602870 | G7JMA3 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0602870 | 0.829857 | 4.069688e-55 | -8.615850e-47 |
| Msa0003700 | Msa0602870 | 0.831302 | 1.802909e-55 | -8.615850e-47 |
| Msa0011170 | Msa0602870 | 0.804198 | 2.423796e-49 | -8.615850e-47 |
| Msa0015390 | Msa0602870 | 0.812816 | 3.505028e-51 | -8.615850e-47 |
| Msa0017510 | Msa0602870 | 0.827455 | 1.549963e-54 | -8.615850e-47 |
| Msa0020930 | Msa0602870 | 0.806215 | 9.166257e-50 | -8.615850e-47 |
| Msa0031340 | Msa0602870 | 0.824980 | 6.016227e-54 | -8.615850e-47 |
| Msa0044000 | Msa0602870 | 0.821516 | 3.874161e-53 | -8.615850e-47 |
| Msa0046100 | Msa0602870 | 0.803942 | 2.740363e-49 | -8.615850e-47 |
| Msa0051020 | Msa0602870 | 0.810863 | 9.328889e-51 | -8.615850e-47 |
| Msa0053780 | Msa0602870 | 0.812124 | 4.965270e-51 | -8.615850e-47 |
| Msa0058490 | Msa0602870 | 0.807521 | 4.853814e-50 | -8.615850e-47 |
| Msa0058510 | Msa0602870 | 0.806778 | 6.974495e-50 | -8.615850e-47 |
| Msa0064350 | Msa0602870 | 0.806647 | 7.431884e-50 | -8.615850e-47 |
| Msa0068680 | Msa0602870 | 0.824383 | 8.317483e-54 | -8.615850e-47 |
| Msa0069330 | Msa0602870 | 0.813821 | 2.108028e-51 | -8.615850e-47 |
| Msa0074700 | Msa0602870 | 0.818750 | 1.665143e-52 | -8.615850e-47 |
| Msa0090360 | Msa0602870 | 0.814214 | 1.726859e-51 | -8.615850e-47 |
| Msa0091600 | Msa0602870 | 0.814663 | 1.373492e-51 | -8.615850e-47 |
| Msa0095560 | Msa0602870 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0096450 | Msa0602870 | 0.811851 | 5.694108e-51 | -8.615850e-47 |
| Msa0097840 | Msa0602870 | 0.817024 | 4.087076e-52 | -8.615850e-47 |
| Msa0101270 | Msa0602870 | 0.816332 | 5.841753e-52 | -8.615850e-47 |
| Msa0104550 | Msa0602870 | 0.820274 | 7.478529e-53 | -8.615850e-47 |
| Msa0114060 | Msa0602870 | 0.824301 | 8.694413e-54 | -8.615850e-47 |
| Msa0119960 | Msa0602870 | 0.804535 | 2.061402e-49 | -8.615850e-47 |
| Msa0602870 | Msa0608320 | 0.808466 | 3.055407e-50 | -8.615850e-47 |
| Msa0602870 | Msa0615710 | 0.837774 | 4.261279e-57 | -8.615850e-47 |
| Msa0602870 | Msa0616020 | 0.801929 | 7.138851e-49 | -8.615850e-47 |
| Msa0602870 | Msa0626090 | 0.825282 | 5.103830e-54 | -8.615850e-47 |
| Msa0602870 | Msa0643890 | 0.967951 | 5.456370e-128 | -8.615850e-47 |
| Msa0602870 | Msa0657970 | 0.804582 | 2.015903e-49 | -8.615850e-47 |
| Msa0602870 | Msa0663390 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa0602870 | Msa0663810 | 0.817319 | 3.506523e-52 | -8.615850e-47 |
| Msa0602870 | Msa0663920 | 0.805467 | 1.316448e-49 | -8.615850e-47 |
| Msa0602870 | Msa0669520 | 0.814046 | 1.880314e-51 | -8.615850e-47 |
| Msa0602870 | Msa0677410 | 0.802061 | 6.706886e-49 | -8.615850e-47 |
| Msa0602870 | Msa0683730 | 0.914834 | 1.202718e-84 | -8.615850e-47 |
| Msa0602870 | Msa0692980 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0602870 | Msa0702470 | 0.806714 | 7.193336e-50 | -8.615850e-47 |
| Msa0602870 | Msa0706940 | 0.803304 | 3.715523e-49 | -8.615850e-47 |
| Msa0602870 | Msa0709400 | 0.847365 | 1.210928e-59 | -8.615850e-47 |
| Msa0602870 | Msa0710800 | 0.801896 | 7.253899e-49 | -8.615850e-47 |
| Msa0602870 | Msa0713790 | 0.817084 | 3.961225e-52 | -8.615850e-47 |
| Msa0602870 | Msa0716690 | 0.838145 | 3.422184e-57 | -8.615850e-47 |
| Msa0602870 | Msa0720690 | 0.820422 | 6.918744e-53 | -8.615850e-47 |
| Msa0602870 | Msa0728630 | 0.809138 | 2.194141e-50 | -8.615850e-47 |
| Msa0602870 | Msa0729720 | 0.856120 | 3.986990e-62 | -8.615850e-47 |
| Msa0602870 | Msa0740510 | 0.821016 | 5.051100e-53 | -8.615850e-47 |
| Msa0602870 | Msa0741240 | 0.813254 | 2.809370e-51 | -8.615850e-47 |
| Msa0602870 | Msa0770080 | 0.853555 | 2.211130e-61 | -8.615850e-47 |
| Msa0602870 | Msa0772410 | 0.827088 | 1.898050e-54 | -8.615850e-47 |
| Msa0602870 | Msa0803890 | 0.809553 | 1.787353e-50 | -8.615850e-47 |
| Msa0602870 | Msa0806800 | 0.809434 | 1.895827e-50 | -8.615850e-47 |
| Msa0602870 | Msa0820770 | 0.826685 | 2.368759e-54 | -8.615850e-47 |
| Msa0602870 | Msa0828560 | 0.815035 | 1.136308e-51 | -8.615850e-47 |
| Msa0602870 | Msa0832340 | 0.808898 | 2.470411e-50 | -8.615850e-47 |
| Msa0602870 | Msa0837600 | 0.802536 | 5.355667e-49 | -8.615850e-47 |
| Msa0602870 | Msa0838580 | 0.805248 | 1.462756e-49 | -8.615850e-47 |
| Msa0602870 | Msa0841340 | 0.809173 | 2.156235e-50 | -8.615850e-47 |
| Msa0602870 | Msa0847770 | 0.811676 | 6.214867e-51 | -8.615850e-47 |
| Msa0602870 | Msa0849100 | 0.818003 | 2.458272e-52 | -8.615850e-47 |
| Msa0602870 | Msa0861090 | 0.821640 | 3.627074e-53 | -8.615850e-47 |
| Msa0602870 | Msa0861870 | 0.823323 | 1.473258e-53 | -8.615850e-47 |
| Msa0602870 | Msa0866270 | 0.800227 | 1.591032e-48 | -8.615850e-47 |
| Msa0602870 | Msa0866550 | 0.804403 | 2.196900e-49 | -8.615850e-47 |
| Msa0602870 | Msa0876190 | 0.822823 | 1.927453e-53 | -8.615850e-47 |
| Msa0602870 | Msa0880020 | 0.831208 | 1.901939e-55 | -8.615850e-47 |
| Msa0602870 | Msa0880140 | 0.822418 | 2.394369e-53 | -8.615850e-47 |
| Msa0602870 | Msa0880780 | 0.802467 | 5.534626e-49 | -8.615850e-47 |
| Msa0602870 | Msa0881460 | 0.852149 | 5.580466e-61 | -8.615850e-47 |
| Msa0602870 | Msa0909140 | 0.801149 | 1.031848e-48 | -8.615850e-47 |
| Msa0602870 | Msa0924470 | 0.821992 | 3.005423e-53 | -8.615850e-47 |
| Msa0602870 | Msa0947660 | 0.816295 | 5.951448e-52 | -8.615850e-47 |
| Msa0602870 | Msa0958360 | 0.802210 | 6.249964e-49 | -8.615850e-47 |
| Msa0602870 | Msa0963270 | 0.829365 | 5.361546e-55 | -8.615850e-47 |
| Msa0602870 | Msa0969520 | 0.822841 | 1.908720e-53 | -8.615850e-47 |
| Msa0602870 | Msa0969600 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0602870 | Msa0969730 | 0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0602870 | Msa0980880 | 0.811762 | 5.952570e-51 | -8.615850e-47 |
| Msa0602870 | Msa0992020 | 0.828568 | 8.362518e-55 | -8.615850e-47 |
| Msa0602870 | Msa0993730 | 0.827446 | 1.557764e-54 | -8.615850e-47 |
| Msa0602870 | Msa0993750 | 0.811582 | 6.514993e-51 | -8.615850e-47 |
| Msa0602870 | Msa0997970 | 0.837376 | 5.391398e-57 | -8.615850e-47 |
| Msa0602870 | Msa1002850 | 0.817013 | 4.109987e-52 | -8.615850e-47 |
| Msa0602870 | Msa1019000 | 0.803070 | 4.154298e-49 | -8.615850e-47 |
| Msa0602870 | Msa1039800 | 0.811572 | 6.545547e-51 | -8.615850e-47 |
| Msa0602870 | Msa1046280 | 0.846329 | 2.326354e-59 | -8.615850e-47 |
| Msa0602870 | Msa1075220 | -0.804973 | 1.670241e-49 | -8.615850e-47 |
| Msa0602870 | Msa1075540 | 0.807038 | 6.145074e-50 | -8.615850e-47 |
| Msa0602870 | Msa1078170 | 0.817383 | 3.393723e-52 | -8.615850e-47 |
| Msa0602870 | Msa1079590 | 0.809304 | 2.022024e-50 | -8.615850e-47 |
| Msa0602870 | Msa1079740 | 0.802340 | 5.877067e-49 | -8.615850e-47 |
| Msa0602870 | Msa1082500 | 0.814097 | 1.832426e-51 | -8.615850e-47 |
| Msa0602870 | Msa1083840 | 0.803746 | 3.008565e-49 | -8.615850e-47 |
| Msa0602870 | Msa1085200 | 0.813993 | 1.931517e-51 | -8.615850e-47 |
| Msa0602870 | Msa1100050 | 0.811322 | 7.418858e-51 | -8.615850e-47 |
| Msa0602870 | Msa1124110 | 0.803923 | 2.765393e-49 | -8.615850e-47 |
| Msa0602870 | Msa1124960 | 0.845348 | 4.296839e-59 | -8.615850e-47 |
| Msa0602870 | Msa1134110 | 0.814375 | 1.590882e-51 | -8.615850e-47 |
| Msa0602870 | Msa1137570 | 0.827165 | 1.818846e-54 | -8.615850e-47 |
| Msa0602870 | Msa1140210 | 0.806759 | 7.036922e-50 | -8.615850e-47 |
| Msa0602870 | Msa1147280 | 0.813006 | 3.183532e-51 | -8.615850e-47 |
| Msa0602870 | Msa1167340 | 0.818385 | 2.015040e-52 | -8.615850e-47 |
| Msa0602870 | Msa1174040 | 0.828066 | 1.104911e-54 | -8.615850e-47 |
| Msa0602870 | Msa1189070 | 0.804390 | 2.210381e-49 | -8.615850e-47 |
| Msa0602870 | Msa1190930 | 0.809730 | 1.637446e-50 | -8.615850e-47 |
| Msa0602870 | Msa1199990 | 0.813959 | 1.965366e-51 | -8.615850e-47 |
| Msa0602870 | Msa1201560 | 0.800140 | 1.657572e-48 | -8.615850e-47 |
| Msa0602870 | Msa1218550 | 0.806382 | 8.451936e-50 | -8.615850e-47 |
| Msa0602870 | Msa1225700 | 0.806167 | 9.381448e-50 | -8.615850e-47 |
| Msa0602870 | Msa1244600 | 0.857150 | 1.985710e-62 | -8.615850e-47 |
| Msa0602870 | Msa1244610 | 0.818165 | 2.260364e-52 | -8.615850e-47 |
| Msa0602870 | Msa1246510 | 0.803680 | 3.105387e-49 | -8.615850e-47 |
| Msa0602870 | Msa1250530 | 0.841470 | 4.661456e-58 | -8.615850e-47 |
| Msa0602870 | Msa1253020 | 0.829045 | 6.410670e-55 | -8.615850e-47 |
| Msa0602870 | Msa1271990 | 0.803953 | 2.724908e-49 | -8.615850e-47 |
| Msa0602870 | Msa1279400 | 0.835983 | 1.221430e-56 | -8.615850e-47 |
| Msa0602870 | Msa1283860 | 0.807358 | 5.256179e-50 | -8.615850e-47 |
| Msa0602870 | Msa1284550 | 0.811648 | 6.302727e-51 | -8.615850e-47 |
| Msa0602870 | Msa1284680 | 0.816649 | 4.960858e-52 | -8.615850e-47 |
| Msa0602870 | Msa1286800 | 0.814027 | 1.898607e-51 | -8.615850e-47 |
| Msa0602870 | Msa1287220 | 0.817540 | 3.127548e-52 | -8.615850e-47 |
| Msa0602870 | Msa1294820 | 0.813045 | 3.122569e-51 | -8.615850e-47 |
| Msa0602870 | Msa1327680 | 0.802328 | 5.910605e-49 | -8.615850e-47 |
| Msa0602870 | Msa1336710 | 0.810961 | 8.882587e-51 | -8.615850e-47 |
| Msa0602870 | Msa1346370 | 0.800589 | 1.342914e-48 | -8.615850e-47 |
| Msa0602870 | Msa1353470 | 0.821863 | 3.219971e-53 | -8.615850e-47 |
| Msa0602870 | Msa1353980 | 0.810112 | 1.355449e-50 | -8.615850e-47 |
| Msa0602870 | Msa1356140 | 0.811502 | 6.779090e-51 | -8.615850e-47 |
| Msa0602870 | Msa1360440 | 0.824791 | 6.665922e-54 | -8.615850e-47 |
| Msa0602870 | Msa1367590 | 0.801463 | 8.898439e-49 | -8.615850e-47 |
| Msa0602870 | Msa1370070 | -0.820083 | 8.273069e-53 | -8.615850e-47 |
| Msa0602870 | Msa1372760 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
| Msa0602870 | Msa1375560 | 0.818758 | 1.658354e-52 | -8.615850e-47 |
| Msa0602870 | Msa1382540 | 0.841091 | 5.864651e-58 | -8.615850e-47 |
| Msa0602870 | Msa1403890 | 0.803938 | 2.745731e-49 | -8.615850e-47 |
| Msa0602870 | Msa1411020 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0602870 | Msa1422580 | 0.830279 | 3.210963e-55 | -8.615850e-47 |
| Msa0602870 | Msa1424290 | 0.800127 | 1.667575e-48 | -8.615850e-47 |
| Msa0602870 | Msa1433390 | 0.812359 | 4.412366e-51 | -8.615850e-47 |
| Msa0602870 | Msa1434350 | 0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0602870 | Msa1435270 | 0.825697 | 4.068720e-54 | -8.615850e-47 |
| Msa0602870 | Msa1436570 | 0.809359 | 1.967922e-50 | -8.615850e-47 |
| Msa0602870 | Msa1439320 | 0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0602870 | Msa1451160 | 0.817411 | 3.343990e-52 | -8.615850e-47 |
| Msa0602870 | Msa1451550 | 0.809266 | 2.060146e-50 | -8.615850e-47 |
| Msa0602870 | Msa1451560 | 0.821157 | 4.686365e-53 | -8.615850e-47 |
| Msa0602870 | Msa1452240 | 0.811370 | 7.242571e-51 | -8.615850e-47 |
| Msa0602870 | Msa1458610 | 0.812582 | 3.942134e-51 | -8.615850e-47 |
| Msa0602870 | Msa1460020 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0602870 | Msa1460050 | 0.838070 | 3.576510e-57 | -8.615850e-47 |
| Msa0602870 | Msa1462290 | 0.810437 | 1.153445e-50 | -8.615850e-47 |
| Msa0602870 | Msa1464810 | 0.817035 | 4.063182e-52 | -8.615850e-47 |
| Msa0602870 | Msa1465300 | 0.805895 | 1.070269e-49 | -8.615850e-47 |
| Msa0602870 | Msa1466540 | 0.807166 | 5.771584e-50 | -8.615850e-47 |
| Msa0127800 | Msa0602870 | 0.818926 | 1.519233e-52 | -8.615850e-47 |
| Msa0137840 | Msa0602870 | 0.800074 | 1.709388e-48 | -8.615850e-47 |
| Msa0140820 | Msa0602870 | 0.801507 | 8.714748e-49 | -8.615850e-47 |
| Msa0145580 | Msa0602870 | 0.821369 | 4.187467e-53 | -8.615850e-47 |
| Msa0157290 | Msa0602870 | 0.827639 | 1.400263e-54 | -8.615850e-47 |
| Msa0159930 | Msa0602870 | 0.823485 | 1.350140e-53 | -8.615850e-47 |
| Msa0168500 | Msa0602870 | 0.810727 | 9.981860e-51 | -8.615850e-47 |
| Msa0184040 | Msa0602870 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
| Msa0194950 | Msa0602870 | -0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0195630 | Msa0602870 | 0.828899 | 6.954405e-55 | -8.615850e-47 |
| Msa0205510 | Msa0602870 | 0.821510 | 3.885233e-53 | -8.615850e-47 |
| Msa0211150 | Msa0602870 | 0.834868 | 2.336962e-56 | -8.615850e-47 |
| Msa0216910 | Msa0602870 | 0.807866 | 4.100672e-50 | -8.615850e-47 |
| Msa0237410 | Msa0602870 | 0.823087 | 1.673172e-53 | -8.615850e-47 |
| Msa0376350 | Msa0602870 | 0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0379640 | Msa0602870 | 0.802983 | 4.329769e-49 | -8.615850e-47 |
| Msa0391690 | Msa0602870 | 0.820385 | 7.053508e-53 | -8.615850e-47 |
| Msa0405570 | Msa0602870 | 0.835853 | 1.317485e-56 | -8.615850e-47 |
| Msa0410650 | Msa0602870 | 0.801953 | 7.059664e-49 | -8.615850e-47 |
| Msa0423520 | Msa0602870 | 0.800869 | 1.176873e-48 | -8.615850e-47 |
| Msa0424790 | Msa0602870 | 0.802481 | 5.497757e-49 | -8.615850e-47 |
| Msa0433360 | Msa0602870 | 0.803010 | 4.275603e-49 | -8.615850e-47 |
| Msa0436050 | Msa0602870 | 0.804974 | 1.669229e-49 | -8.615850e-47 |
| Msa0440750 | Msa0602870 | 0.821122 | 4.775322e-53 | -8.615850e-47 |
| Msa0455040 | Msa0602870 | 0.819341 | 1.221829e-52 | -8.615850e-47 |
| Msa0469990 | Msa0602870 | 0.825886 | 3.669667e-54 | -8.615850e-47 |
| Msa0477080 | Msa0602870 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0479170 | Msa0602870 | 0.819661 | 1.033064e-52 | -8.615850e-47 |
| Msa0479970 | Msa0602870 | 0.804919 | 1.714356e-49 | -8.615850e-47 |
| Msa0249860 | Msa0602870 | 0.809578 | 1.765920e-50 | -8.615850e-47 |
| Msa0257460 | Msa0602870 | 0.804112 | 2.526148e-49 | -8.615850e-47 |
| Msa0259500 | Msa0602870 | 0.811088 | 8.338536e-51 | -8.615850e-47 |
| Msa0264150 | Msa0602870 | 0.802637 | 5.103699e-49 | -8.615850e-47 |
| Msa0266500 | Msa0602870 | 0.810823 | 9.515525e-51 | -8.615850e-47 |
| Msa0273900 | Msa0602870 | 0.831827 | 1.338419e-55 | -8.615850e-47 |
| Msa0280090 | Msa0602870 | 0.807955 | 3.924614e-50 | -8.615850e-47 |
| Msa0287410 | Msa0602870 | 0.807748 | 4.343975e-50 | -8.615850e-47 |
| Msa0287650 | Msa0602870 | 0.811948 | 5.422948e-51 | -8.615850e-47 |
| Msa0305700 | Msa0602870 | 0.800777 | 1.229390e-48 | -8.615850e-47 |
| Msa0311700 | Msa0602870 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0326520 | Msa0602870 | 0.800097 | 1.691093e-48 | -8.615850e-47 |
| Msa0334550 | Msa0602870 | 0.806563 | 7.743025e-50 | -8.615850e-47 |
| Msa0339500 | Msa0602870 | 0.801696 | 7.971443e-49 | -8.615850e-47 |
| Msa0341050 | Msa0602870 | 0.819953 | 8.856420e-53 | -8.615850e-47 |
| Msa0341540 | Msa0602870 | 0.815982 | 6.994493e-52 | -8.615850e-47 |
| Msa0342310 | Msa0602870 | 0.804296 | 2.312425e-49 | -8.615850e-47 |
| Msa0343850 | Msa0602870 | 0.819250 | 1.281520e-52 | -8.615850e-47 |
| Msa0345970 | Msa0602870 | 0.809835 | 1.555035e-50 | -8.615850e-47 |
| Msa0346430 | Msa0602870 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0489790 | Msa0602870 | 0.805772 | 1.136045e-49 | -8.615850e-47 |
| Msa0502880 | Msa0602870 | 0.817483 | 3.221455e-52 | -8.615850e-47 |
| Msa0507680 | Msa0602870 | 0.812683 | 3.746619e-51 | -8.615850e-47 |
| Msa0512750 | Msa0602870 | 0.813868 | 2.058161e-51 | -8.615850e-47 |
| Msa0516170 | Msa0602870 | 0.806634 | 7.477526e-50 | -8.615850e-47 |
| Msa0523460 | Msa0602870 | 0.831855 | 1.317643e-55 | -8.615850e-47 |
| Msa0524500 | Msa0602870 | 0.815403 | 9.413445e-52 | -8.615850e-47 |
| Msa0539750 | Msa0602870 | 0.814478 | 1.509390e-51 | -8.615850e-47 |
| Msa0542520 | Msa0602870 | 0.804349 | 2.253961e-49 | -8.615850e-47 |
| Msa0547890 | Msa0602870 | 0.917052 | 8.481528e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602870 | MtrunA17_Chr4g0030781 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0602870 | MtrunA17_Chr4g0030791 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0602870 | MtrunA17_Chr4g0036721 | 98.315 | 356 | 6 | 0 | 1 | 356 | 1 | 356 | 0.0 | 712 |
| Msa0602870 | MtrunA17_Chr4g0014171 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 708 |
| Msa0602870 | MtrunA17_Chr5g0405881 | 84.038 | 213 | 7 | 1 | 144 | 356 | 71 | 256 | 1.87e-123 | 355 |
| Msa0602870 | MtrunA17_Chr8g0380731 | 41.457 | 357 | 206 | 3 | 1 | 354 | 1 | 357 | 3.00e-101 | 303 |
| Msa0602870 | MtrunA17_Chr8g0380741 | 40.517 | 348 | 205 | 2 | 1 | 346 | 1 | 348 | 1.35e-95 | 288 |
| Msa0602870 | MtrunA17_Chr8g0380751 | 39.867 | 301 | 179 | 2 | 29 | 327 | 1 | 301 | 1.24e-82 | 254 |
| Msa0602870 | MtrunA17_Chr7g0227371 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 6.11e-15 | 69.7 |
| Msa0602870 | MtrunA17_Chr7g0261321 | 28.750 | 160 | 111 | 2 | 196 | 353 | 365 | 523 | 1.34e-13 | 72.0 |
| Msa0602870 | MtrunA17_Chr7g0261321 | 25.389 | 193 | 102 | 5 | 30 | 180 | 61 | 253 | 1.77e-11 | 65.5 |
| Msa0602870 | MtrunA17_Chr2g0326201 | 32.374 | 139 | 86 | 5 | 200 | 333 | 87 | 222 | 4.57e-12 | 65.5 |
| Msa0602870 | MtrunA17_Chr2g0326061 | 27.778 | 180 | 119 | 7 | 181 | 355 | 295 | 468 | 1.10e-11 | 65.9 |
| Msa0602870 | MtrunA17_Chr2g0326171 | 29.012 | 162 | 104 | 7 | 200 | 355 | 295 | 451 | 1.80e-11 | 65.1 |
| Msa0602870 | MtrunA17_Chr2g0326191 | 32.143 | 140 | 87 | 5 | 200 | 334 | 310 | 446 | 2.00e-11 | 65.1 |
| Msa0602870 | MtrunA17_Chr1g0185811 | 28.671 | 143 | 95 | 4 | 196 | 335 | 422 | 560 | 2.47e-11 | 65.1 |
| Msa0602870 | MtrunA17_Chr2g0326071 | 28.395 | 162 | 105 | 7 | 200 | 355 | 295 | 451 | 4.26e-11 | 63.9 |
| Msa0602870 | MtrunA17_Chr1g0185821 | 28.671 | 143 | 95 | 4 | 196 | 335 | 391 | 529 | 5.98e-11 | 63.5 |
| Msa0602870 | MtrunA17_Chr4g0029921 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 6.23e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602870 | AT1G07750.1 | 80.056 | 356 | 71 | 0 | 1 | 356 | 1 | 356 | 0.0 | 595 |
| Msa0602870 | AT2G28680.1 | 79.494 | 356 | 73 | 0 | 1 | 356 | 1 | 356 | 0.0 | 590 |
| Msa0602870 | AT1G03890.1 | 24.694 | 409 | 244 | 11 | 5 | 354 | 44 | 447 | 1.05e-31 | 124 |
| Msa0602870 | AT1G03880.1 | 23.214 | 392 | 235 | 9 | 12 | 339 | 42 | 431 | 6.50e-28 | 114 |
| Msa0602870 | AT5G44120.3 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 3.99e-24 | 103 |
| Msa0602870 | AT5G44120.2 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.46e-20 | 92.0 |
| Msa0602870 | AT4G28520.1 | 25.581 | 301 | 181 | 7 | 78 | 336 | 193 | 492 | 1.87e-18 | 87.0 |
| Msa0602870 | AT4G28520.3 | 30.714 | 140 | 96 | 1 | 197 | 336 | 283 | 421 | 1.64e-15 | 77.8 |
| Msa0602870 | AT2G28490.1 | 23.514 | 370 | 213 | 12 | 51 | 355 | 131 | 495 | 1.34e-14 | 75.1 |
| Msa0602870 | AT5G44120.1 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 8.51e-14 | 71.2 |
Find 112 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCATTCTACTTTAATT+TGG | 0.176642 | 4_2:+46936108 | None:intergenic |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4_2:+46937039 | None:intergenic |
| AGAAAAGGTTGTTGCAATTA+AGG | 0.194128 | 4_2:-46937343 | Msa0602870:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 4_2:-46936857 | Msa0602870:CDS |
| GTAATTACTGAATAAGTATT+TGG | 0.214848 | 4_2:-46938630 | None:intergenic |
| AAGCCAGACTTATACTTAAA+AGG | 0.221397 | 4_2:+46935811 | None:intergenic |
| CGGAAAAGCTTCTCAACTTC+TGG | 0.246295 | 4_2:+46936168 | None:intergenic |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4_2:-46937183 | Msa0602870:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.269206 | 4_2:-46936840 | Msa0602870:CDS |
| GTGTGTATTTATAAGTATAT+TGG | 0.297298 | 4_2:+46938509 | None:intergenic |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4_2:-46936934 | Msa0602870:CDS |
| AGGCATGGCTTTGAACTGTT+TGG | 0.348039 | 4_2:-46937019 | Msa0602870:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4_2:-46936928 | Msa0602870:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4_2:+46936125 | None:intergenic |
| TAGGGGAAGTGGCCGTGTTC+AGG | 0.353324 | 4_2:-46936821 | Msa0602870:CDS |
| GTTCAGGTTGTTGGTGTTGA+TGG | 0.356237 | 4_2:-46936805 | Msa0602870:CDS |
| TGTGGGAAGGGCTTGGGACT+TGG | 0.357118 | 4_2:-46937145 | Msa0602870:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 4_2:-46936883 | Msa0602870:CDS |
| CTGAGTTTGTGGGAAGGGCT+TGG | 0.373540 | 4_2:-46937152 | Msa0602870:CDS |
| TGAGTTTGTGGGAAGGGCTT+GGG | 0.376069 | 4_2:-46937151 | Msa0602870:CDS |
| GAGGTACTCTGATTCTTCTA+AGG | 0.392927 | 4_2:-46938231 | Msa0602870:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.404646 | 4_2:-46936839 | Msa0602870:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 4_2:-46936904 | Msa0602870:CDS |
| AAGGAATTGATTGCCTCAAT+TGG | 0.408989 | 4_2:-46935977 | Msa0602870:three_prime_UTR |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4_2:-46938212 | Msa0602870:intron |
| AACAATGTGAAGACACTTGT+TGG | 0.410461 | 4_2:-46937117 | Msa0602870:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 4_2:-46937315 | Msa0602870:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4_2:+46936942 | None:intergenic |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.412975 | 4_2:-46937081 | Msa0602870:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4_2:-46936947 | Msa0602870:CDS |
| TCCATTCTACTTTAATTTGG+AGG | 0.417794 | 4_2:+46936111 | None:intergenic |
| CATGCAAGAATTGTATCTAA+TGG | 0.418961 | 4_2:+46935880 | None:intergenic |
| TACACTTTCTTCGCCGATTG+AGG | 0.424668 | 4_2:+46938368 | None:intergenic |
| AGTGGCCGTGTTCAGGTTGT+TGG | 0.428776 | 4_2:-46936814 | Msa0602870:CDS |
| ATCAAGCTTCACAATCCCTT+TGG | 0.429226 | 4_2:+46937083 | None:intergenic |
| TTGTGTTCCTCTTTAGGCTC+AGG | 0.430393 | 4_2:+46937045 | None:intergenic |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4_2:+46937180 | None:intergenic |
| AAGTTAGCTCTTCTGAAGAA+TGG | 0.432091 | 4_2:-46938266 | Msa0602870:CDS |
| ACTTACATTGTTAGGGGAAG+TGG | 0.437332 | 4_2:-46936832 | Msa0602870:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4_2:-46936241 | Msa0602870:CDS |
| CATGGCTTTGAACTGTTTGG+AGG | 0.461927 | 4_2:-46937016 | Msa0602870:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4_2:-46936943 | Msa0602870:CDS |
| TCCTCCAAATTAAAGTAGAA+TGG | 0.462317 | 4_2:-46936112 | Msa0602870:exon |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4_2:+46937300 | None:intergenic |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4_2:-46937302 | Msa0602870:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 4_2:-46937258 | Msa0602870:CDS |
| AGTCTTGGAGACCACTTTGA+AGG | 0.476765 | 4_2:-46936776 | Msa0602870:CDS |
| TTGGAGACCACTTTGAAGGC+TGG | 0.478375 | 4_2:-46936772 | Msa0602870:CDS |
| TTCAACTGAGTTTGTGGGAA+GGG | 0.479133 | 4_2:-46937157 | Msa0602870:CDS |
| AAGCTTCACAATCCCTTTGG+CGG | 0.479301 | 4_2:+46937086 | None:intergenic |
| GATACAGGAAGTGGAGTTGC+TGG | 0.481664 | 4_2:-46937387 | Msa0602870:intron |
| TATCGATCTTTCTCCTCAAT+CGG | 0.484260 | 4_2:-46938381 | Msa0602870:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4_2:-46936938 | Msa0602870:CDS |
| GAACTGTTTGGAGGCACCAT+TGG | 0.492260 | 4_2:-46937007 | Msa0602870:CDS |
| GCTACCTGAATCAGAAGAAA+AGG | 0.493511 | 4_2:-46937358 | Msa0602870:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.499253 | 4_2:-46936715 | Msa0602870:CDS |
| TCAAAGACAGATCAAAATAG+AGG | 0.499442 | 4_2:+46935941 | None:intergenic |
| ATTCTACTTTAATTTGGAGG+AGG | 0.504281 | 4_2:+46936114 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4_2:-46936232 | Msa0602870:CDS |
| CAGCCTTCCTGAGCCTAAAG+AGG | 0.511945 | 4_2:-46937052 | Msa0602870:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.513502 | 4_2:-46936256 | Msa0602870:CDS |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4_2:+46936252 | None:intergenic |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4_2:-46936988 | Msa0602870:CDS |
| GCTATCACCTACAGTTCTGC+AGG | 0.538663 | 4_2:-46936208 | Msa0602870:CDS |
| TTGGAAAGCAATCCGCCAAA+GGG | 0.540566 | 4_2:-46937098 | Msa0602870:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 4_2:+46937190 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.543963 | 4_2:-46937039 | Msa0602870:CDS |
| AAAGGTTGTTGCAATTAAGG+AGG | 0.546053 | 4_2:-46937340 | Msa0602870:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.549544 | 4_2:+46936115 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4_2:-46936252 | Msa0602870:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 4_2:-46936912 | Msa0602870:CDS |
| TTGATATTAAGAATGGTGGA+AGG | 0.557402 | 4_2:-46936981 | Msa0602870:CDS |
| GTTCCTCTTTAGGCTCAGGA+AGG | 0.561301 | 4_2:+46937049 | None:intergenic |
| ATGTTACCTTGACGCAACAT+AGG | 0.563061 | 4_2:+46938299 | None:intergenic |
| ATGGTGGATCGTACTACGCT+TGG | 0.563071 | 4_2:-46938337 | Msa0602870:CDS |
| TGTTGATGGTAAGAGAGTCT+TGG | 0.566059 | 4_2:-46936791 | Msa0602870:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 4_2:+46936865 | None:intergenic |
| TAAGCCCTTAAAACCAATTG+AGG | 0.572854 | 4_2:+46935964 | None:intergenic |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 4_2:+46936876 | None:intergenic |
| ACTTCAAAAGCACACAAGGC+TGG | 0.580061 | 4_2:-46937231 | Msa0602870:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4_2:-46936985 | Msa0602870:CDS |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 4_2:+46938311 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4_2:+46936148 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.587151 | 4_2:-46937339 | Msa0602870:CDS |
| AAGAAAGTGTACGGTGGTGA+TGG | 0.591740 | 4_2:-46938356 | Msa0602870:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4_2:+46936991 | None:intergenic |
| GTTGGAAAGCAATCCGCCAA+AGG | 0.593219 | 4_2:-46937099 | Msa0602870:CDS |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 4_2:+46936201 | None:intergenic |
| CGATACTTCAAAAGCACACA+AGG | 0.594218 | 4_2:-46937235 | Msa0602870:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 4_2:-46936710 | Msa0602870:CDS |
| AAAGTGTACGGTGGTGATGG+TGG | 0.599662 | 4_2:-46938353 | Msa0602870:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4_2:+46937299 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 4_2:-46937274 | Msa0602870:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4_2:+46936935 | None:intergenic |
| TTTCAACTGAGTTTGTGGGA+AGG | 0.619355 | 4_2:-46937158 | Msa0602870:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.620675 | 4_2:-46936838 | Msa0602870:CDS |
| CAACACCAACAACCTGAACA+CGG | 0.621513 | 4_2:+46936809 | None:intergenic |
| CAATCGGCGAAGAAAGTGTA+CGG | 0.625964 | 4_2:-46938365 | Msa0602870:CDS |
| CAAATCTCCAGCCTTCAAAG+TGG | 0.631181 | 4_2:+46936765 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4_2:-46937034 | Msa0602870:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4_2:+46936931 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4_2:-46936236 | Msa0602870:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.643057 | 4_2:-46938305 | Msa0602870:CDS |
| GAGATTTGTTCATTGTACCG+AGG | 0.645213 | 4_2:-46936750 | Msa0602870:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4_2:-46937299 | Msa0602870:CDS |
| TGATATTAAGAATGGTGGAA+GGG | 0.666660 | 4_2:-46936980 | Msa0602870:CDS |
| ATGTTGCGTCAAGGTAACAT+TGG | 0.668475 | 4_2:-46938296 | Msa0602870:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4_2:-46937286 | Msa0602870:CDS |
| TTAGAAGAATCAGAGTACCT+CGG | 0.684154 | 4_2:+46938233 | None:intergenic |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4_2:+46937301 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4_2:-46936705 | Msa0602870:CDS |
| TCGGCGAAGAAAGTGTACGG+TGG | 0.763757 | 4_2:-46938362 | Msa0602870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAAAAAGTTGAAA+CGG | - | chr4_2:46936577-46936596 | Msa0602870:intron | 15.0% |
| !!! | TTTTTAACATTTGTATCAAA+CGG | - | chr4_2:46936708-46936727 | Msa0602870:CDS | 15.0% |
| !! | TACTACTATAATATCAATAT+TGG | + | chr4_2:46936936-46936955 | None:intergenic | 15.0% |
| !! | TGTAATCAAATATATTTACT+AGG | - | chr4_2:46938022-46938041 | Msa0602870:intron | 15.0% |
| !!! | ACTTTTATTTTGGATTTATA+AGG | - | chr4_2:46938419-46938438 | Msa0602870:five_prime_UTR | 15.0% |
| !! | AAGAAAAATAACTATATCTA+AGG | + | chr4_2:46938514-46938533 | None:intergenic | 15.0% |
| !! | GTGTGTATTTATAAGTATAT+TGG | + | chr4_2:46935909-46935928 | None:intergenic | 20.0% |
| !!! | GTTTTATTTGTCATTATGTT+TGG | - | chr4_2:46936449-46936468 | Msa0602870:intron | 20.0% |
| !! | TATGTTTGGATGATTATAAA+AGG | - | chr4_2:46936463-46936482 | Msa0602870:intron | 20.0% |
| !! | ATGTTTGGATGATTATAAAA+GGG | - | chr4_2:46936464-46936483 | Msa0602870:intron | 20.0% |
| !! | TTTGTTAGGGATTATAAAAA+AGG | - | chr4_2:46936507-46936526 | Msa0602870:intron | 20.0% |
| !! | CAGAAAAAAATCACTAAAAT+CGG | - | chr4_2:46936616-46936635 | Msa0602870:intron | 20.0% |
| !!! | AAAAAAATGAATTTCTGAGA+AGG | - | chr4_2:46936641-46936660 | Msa0602870:intron | 20.0% |
| !!! | AACTCTATTTTTATACATCA+TGG | - | chr4_2:46936844-46936863 | Msa0602870:CDS | 20.0% |
| !! | TTCTATTATACCATCAATAT+TGG | + | chr4_2:46936977-46936996 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_2:46937802-46937821 | None:intergenic | 20.0% |
| !! | AACAAATATCAAACAACAAA+AGG | + | chr4_2:46937802-46937821 | None:intergenic | 20.0% |
| !! | TTTCAAAGAAACACAAATTT+GGG | + | chr4_2:46937950-46937969 | None:intergenic | 20.0% |
| !! | ATTTCAAAGAAACACAAATT+TGG | + | chr4_2:46937951-46937970 | None:intergenic | 20.0% |
| !! | ATCAAATATATTTACTAGGA+AGG | - | chr4_2:46938026-46938045 | Msa0602870:intron | 20.0% |
| !! | ATTTCCATTCTACTTTAATT+TGG | + | chr4_2:46938310-46938329 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTAGTTTTGTCA+TGG | - | chr4_2:46938330-46938349 | Msa0602870:CDS | 20.0% |
| ! | ACACGAAAAAACAAATGAAA+GGG | + | chr4_2:46935982-46936001 | None:intergenic | 25.0% |
| !! | ACTTTTTATGAATGAAGTGT+TGG | + | chr4_2:46936431-46936450 | None:intergenic | 25.0% |
| !!! | TATAAAAGGGTTAGTTTGTT+AGG | - | chr4_2:46936477-46936496 | Msa0602870:intron | 25.0% |
| !!! | ATAAAAGGGTTAGTTTGTTA+GGG | - | chr4_2:46936478-46936497 | Msa0602870:intron | 25.0% |
| !!! | CGATTTTAGTGATTTTTTTC+TGG | + | chr4_2:46936618-46936637 | None:intergenic | 25.0% |
| ! | TCACAAAAGCAGTATAAAAT+AGG | + | chr4_2:46936910-46936929 | None:intergenic | 25.0% |
| ! | TTTGTGATTACCAATATTGA+TGG | - | chr4_2:46936923-46936942 | Msa0602870:CDS | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | + | chr4_2:46937427-46937446 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | - | chr4_2:46937427-46937446 | Msa0602870:intron | 25.0% |
| ! | AGTTAAGAAAAACTCACTTA+GGG | + | chr4_2:46937753-46937772 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAAAACTCACTT+AGG | + | chr4_2:46937754-46937773 | None:intergenic | 25.0% |
| !! | TCTAGTGTATACATAGATTT+TGG | - | chr4_2:46937912-46937931 | Msa0602870:intron | 25.0% |
| ! | CAATATACCTTGATATTACA+AGG | + | chr4_2:46938076-46938095 | None:intergenic | 25.0% |
| !!! | AAGTTTCTGCACTTTTATTT+TGG | - | chr4_2:46938409-46938428 | Msa0602870:five_prime_UTR | 25.0% |
| !!! | TTTCCTTTTAAGTATAAGTC+TGG | - | chr4_2:46938601-46938620 | Msa0602870:five_prime_UTR | 25.0% |
| CACACGAAAAAACAAATGAA+AGG | + | chr4_2:46935983-46936002 | None:intergenic | 30.0% | |
| ! | TTTTATGTTGATCCCTCAAT+TGG | - | chr4_2:46936313-46936332 | Msa0602870:intron | 30.0% |
| TTTATGTTGATCCCTCAATT+GGG | - | chr4_2:46936314-46936333 | Msa0602870:intron | 30.0% | |
| !!! | TTTTATGAATGAAGTGTTGG+TGG | + | chr4_2:46936428-46936447 | None:intergenic | 30.0% |
| !! | TAAAAGGGTTAGTTTGTTAG+GGG | - | chr4_2:46936479-46936498 | Msa0602870:intron | 30.0% |
| TAACATTTGTATCAAACGGA+TGG | - | chr4_2:46936712-46936731 | Msa0602870:CDS | 30.0% | |
| ATGAGAAAAGCTATACCAAA+GGG | - | chr4_2:46936787-46936806 | Msa0602870:CDS | 30.0% | |
| TGTTGTGATACTTAATAGTG+AGG | - | chr4_2:46936998-46937017 | Msa0602870:CDS | 30.0% | |
| AGAAAAGGTTGTTGCAATTA+AGG | - | chr4_2:46937072-46937091 | Msa0602870:CDS | 30.0% | |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | - | chr4_2:46937211-46937230 | Msa0602870:CDS | 30.0% |
| AATCCAGTAAAGATTCCATT+AGG | + | chr4_2:46937238-46937257 | None:intergenic | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | - | chr4_2:46937430-46937449 | Msa0602870:intron | 30.0% | |
| ! | TTGATATTAAGAATGGTGGA+AGG | - | chr4_2:46937434-46937453 | Msa0602870:intron | 30.0% |
| ! | TGATATTAAGAATGGTGGAA+GGG | - | chr4_2:46937435-46937454 | Msa0602870:intron | 30.0% |
| GTTAAGAAAAACTCACTTAG+GGG | + | chr4_2:46937752-46937771 | None:intergenic | 30.0% | |
| ATACTTATGATTTCTTACCG+TGG | - | chr4_2:46938122-46938141 | Msa0602870:intron | 30.0% | |
| CTGAAAAAACAACAATACCA+CGG | + | chr4_2:46938142-46938161 | None:intergenic | 30.0% | |
| !! | TTCTACTTTAATTTGGAGGA+GGG | + | chr4_2:46938303-46938322 | None:intergenic | 30.0% |
| !! | ATTCTACTTTAATTTGGAGG+AGG | + | chr4_2:46938304-46938323 | None:intergenic | 30.0% |
| TCCTCCAAATTAAAGTAGAA+TGG | - | chr4_2:46938303-46938322 | Msa0602870:CDS | 30.0% | |
| !! | TCCATTCTACTTTAATTTGG+AGG | + | chr4_2:46938307-46938326 | None:intergenic | 30.0% |
| !!! | TTTTAGTTTTGTCATGGCAT+TGG | - | chr4_2:46938336-46938355 | Msa0602870:CDS | 30.0% |
| !!! | ATTGCCTCAATTGGTTTTAA+GGG | - | chr4_2:46938447-46938466 | Msa0602870:five_prime_UTR | 30.0% |
| TCAAAGACAGATCAAAATAG+AGG | + | chr4_2:46938477-46938496 | None:intergenic | 30.0% | |
| CATGCAAGAATTGTATCTAA+TGG | + | chr4_2:46938538-46938557 | None:intergenic | 30.0% | |
| AAGCCAGACTTATACTTAAA+AGG | + | chr4_2:46938607-46938626 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGTGTCGTTGCTA+TGG | - | chr4_2:46936010-46936029 | Msa0602870:three_prime_UTR | 35.0% |
| TATCGATCTTTCTCCTCAAT+CGG | - | chr4_2:46936034-46936053 | Msa0602870:three_prime_UTR | 35.0% | |
| ! | AAGTTAGCTCTTCTGAAGAA+TGG | - | chr4_2:46936149-46936168 | Msa0602870:CDS | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+CGG | + | chr4_2:46936185-46936204 | None:intergenic | 35.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | - | chr4_2:46936203-46936222 | Msa0602870:CDS | 35.0% | |
| TTATGTTGATCCCTCAATTG+GGG | - | chr4_2:46936315-46936334 | Msa0602870:intron | 35.0% | |
| !! | AAAAGGGTTAGTTTGTTAGG+GGG | - | chr4_2:46936480-46936499 | Msa0602870:intron | 35.0% |
| !! | AGTTGAAACGGTTTTGTGTT+TGG | - | chr4_2:46936589-46936608 | Msa0602870:intron | 35.0% |
| CATGAGAAAAGCTATACCAA+AGG | - | chr4_2:46936786-46936805 | Msa0602870:CDS | 35.0% | |
| !! | TAGTGAGGATTTGTTGATAC+AGG | - | chr4_2:46937013-46937032 | Msa0602870:CDS | 35.0% |
| ! | ACAACCTTTTCTTCTGATTC+AGG | + | chr4_2:46937064-46937083 | None:intergenic | 35.0% |
| AAAGGTTGTTGCAATTAAGG+AGG | - | chr4_2:46937075-46937094 | Msa0602870:CDS | 35.0% | |
| AAGGTTGTTGCAATTAAGGA+GGG | - | chr4_2:46937076-46937095 | Msa0602870:CDS | 35.0% | |
| ! | TGGATTTTCAACTGAGTTTG+TGG | - | chr4_2:46937252-46937271 | Msa0602870:CDS | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | - | chr4_2:46937253-46937272 | Msa0602870:CDS | 35.0% |
| AACAATGTGAAGACACTTGT+TGG | - | chr4_2:46937298-46937317 | Msa0602870:CDS | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | - | chr4_2:46937575-46937594 | Msa0602870:intron | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | - | chr4_2:46937576-46937595 | Msa0602870:intron | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | - | chr4_2:46937577-46937596 | Msa0602870:intron | 35.0% | |
| TTCGAAACAACGAAAAACCT+CGG | + | chr4_2:46937685-46937704 | None:intergenic | 35.0% | |
| TAGACAGATAATGAGTGCAT+CGG | + | chr4_2:46937896-46937915 | None:intergenic | 35.0% | |
| AAGGAATTGATTGCCTCAAT+TGG | - | chr4_2:46938438-46938457 | Msa0602870:five_prime_UTR | 35.0% | |
| !!! | GATTGCCTCAATTGGTTTTA+AGG | - | chr4_2:46938446-46938465 | Msa0602870:five_prime_UTR | 35.0% |
| TAAGCCCTTAAAACCAATTG+AGG | + | chr4_2:46938454-46938473 | None:intergenic | 35.0% | |
| !!! | GTTTTTGAGTGCATGTGGTT+AGG | + | chr4_2:46935931-46935950 | None:intergenic | 40.0% |
| !!! | GATGTGTTTTTGAGTGCATG+TGG | + | chr4_2:46935936-46935955 | None:intergenic | 40.0% |
| ATGTTACCTTGACGCAACAT+AGG | + | chr4_2:46936119-46936138 | None:intergenic | 40.0% | |
| ATGTTGCGTCAAGGTAACAT+TGG | - | chr4_2:46936119-46936138 | Msa0602870:exon | 40.0% | |
| ! | GAGGTACTCTGATTCTTCTA+AGG | - | chr4_2:46936184-46936203 | Msa0602870:CDS | 40.0% |
| GCTATCATAACCCCAATTGA+GGG | + | chr4_2:46936328-46936347 | None:intergenic | 40.0% | |
| TGCTATCATAACCCCAATTG+AGG | + | chr4_2:46936329-46936348 | None:intergenic | 40.0% | |
| ! | ACGTCGTCAATCAAAAGTGT+CGG | + | chr4_2:46936393-46936412 | None:intergenic | 40.0% |
| !! | TGTTAGGGGGTTAGTTTGTT+AGG | - | chr4_2:46936493-46936512 | Msa0602870:intron | 40.0% |
| !! | GTTAGGGGGTTAGTTTGTTA+GGG | - | chr4_2:46936494-46936513 | Msa0602870:intron | 40.0% |
| AACGAAATCAAAGAGCCCTT+TGG | + | chr4_2:46936805-46936824 | None:intergenic | 40.0% | |
| !! | GGATTTGTTGATACAGGAAG+TGG | - | chr4_2:46937019-46937038 | Msa0602870:CDS | 40.0% |
| GCTACCTGAATCAGAAGAAA+AGG | - | chr4_2:46937057-46937076 | Msa0602870:CDS | 40.0% | |
| ! | CGATACTTCAAAAGCACACA+AGG | - | chr4_2:46937180-46937199 | Msa0602870:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | - | chr4_2:46937220-46937239 | Msa0602870:CDS | 40.0% |
| GGTCCTAATGGAATCTTTAC+TGG | - | chr4_2:46937232-46937251 | Msa0602870:CDS | 40.0% | |
| TTTCAACTGAGTTTGTGGGA+AGG | - | chr4_2:46937257-46937276 | Msa0602870:CDS | 40.0% | |
| TTCAACTGAGTTTGTGGGAA+GGG | - | chr4_2:46937258-46937277 | Msa0602870:CDS | 40.0% | |
| ATCAAGCTTCACAATCCCTT+TGG | + | chr4_2:46937335-46937354 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+TGG | - | chr4_2:46937334-46937353 | Msa0602870:CDS | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | + | chr4_2:46937379-46937398 | None:intergenic | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | - | chr4_2:46937376-46937395 | Msa0602870:CDS | 40.0% | |
| ACTTACATTGTTAGGGGAAG+TGG | - | chr4_2:46937583-46937602 | Msa0602870:intron | 40.0% | |
| !! | TGTTGATGGTAAGAGAGTCT+TGG | - | chr4_2:46937624-46937643 | Msa0602870:intron | 40.0% |
| ! | GAGATTTGTTCATTGTACCG+AGG | - | chr4_2:46937665-46937684 | Msa0602870:intron | 40.0% |
| TCGAAGATTGCTGACAATGA+TGG | - | chr4_2:46937700-46937719 | Msa0602870:intron | 40.0% | |
| ! | GATTGCTGACAATGATGGAA+TGG | - | chr4_2:46937705-46937724 | Msa0602870:intron | 40.0% |
| CCTTGATATTACAAGGCTAG+TGG | + | chr4_2:46938069-46938088 | None:intergenic | 40.0% | |
| !! | CCACTAGCCTTGTAATATCA+AGG | - | chr4_2:46938066-46938085 | Msa0602870:intron | 40.0% |
| CAGTCCTGTATTTACACACA+TGG | - | chr4_2:46938159-46938178 | Msa0602870:intron | 40.0% | |
| ! | AGAAGCTTTTCCGTTCAAAG+AGG | - | chr4_2:46938257-46938276 | Msa0602870:CDS | 40.0% |
| ATTTGGAGGAGGGAAGAAAA+TGG | + | chr4_2:46938293-46938312 | None:intergenic | 40.0% | |
| ! | TACACTTTCTTCGCCGATTG+AGG | + | chr4_2:46936050-46936069 | None:intergenic | 45.0% |
| ! | CAATCGGCGAAGAAAGTGTA+CGG | - | chr4_2:46936050-46936069 | Msa0602870:three_prime_UTR | 45.0% |
| ! | AAGAAAGTGTACGGTGGTGA+TGG | - | chr4_2:46936059-46936078 | Msa0602870:three_prime_UTR | 45.0% |
| !!! | AGAATGGTTTTGCTGTTCCG+AGG | - | chr4_2:46936165-46936184 | Msa0602870:CDS | 45.0% |
| GCCATAAATCCTATTCTCCG+TGG | - | chr4_2:46936365-46936384 | Msa0602870:intron | 45.0% | |
| GCCACGGAGAATAGGATTTA+TGG | + | chr4_2:46936369-46936388 | None:intergenic | 45.0% | |
| !! | AATCAAAAGTGTCGGTGCCA+CGG | + | chr4_2:46936385-46936404 | None:intergenic | 45.0% |
| ACCATGTCACAACACCAAAG+GGG | + | chr4_2:46937117-46937136 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | + | chr4_2:46937118-46937137 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | - | chr4_2:46937129-46937148 | Msa0602870:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | - | chr4_2:46937141-46937160 | Msa0602870:CDS | 45.0% | |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | - | chr4_2:46937157-46937176 | Msa0602870:CDS | 45.0% |
| ! | ACTTCAAAAGCACACAAGGC+TGG | - | chr4_2:46937184-46937203 | Msa0602870:CDS | 45.0% |
| AGATTCCATTAGGACCAGTC+AGG | + | chr4_2:46937228-46937247 | None:intergenic | 45.0% | |
| TTGGAAAGCAATCCGCCAAA+GGG | - | chr4_2:46937317-46937336 | Msa0602870:CDS | 45.0% | |
| AAGCTTCACAATCCCTTTGG+CGG | + | chr4_2:46937332-46937351 | None:intergenic | 45.0% | |
| TTGTGTTCCTCTTTAGGCTC+AGG | + | chr4_2:46937373-46937392 | None:intergenic | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | - | chr4_2:46937381-46937400 | Msa0602870:CDS | 45.0% | |
| !! | AGGCATGGCTTTGAACTGTT+TGG | - | chr4_2:46937396-46937415 | Msa0602870:intron | 45.0% |
| !! | CATGGCTTTGAACTGTTTGG+AGG | - | chr4_2:46937399-46937418 | Msa0602870:intron | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | - | chr4_2:46937468-46937487 | Msa0602870:intron | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | - | chr4_2:46937472-46937491 | Msa0602870:intron | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | + | chr4_2:46937476-46937495 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | + | chr4_2:46937487-46937506 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | - | chr4_2:46937487-46937506 | Msa0602870:intron | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | - | chr4_2:46937503-46937522 | Msa0602870:intron | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | - | chr4_2:46937511-46937530 | Msa0602870:intron | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | + | chr4_2:46937553-46937572 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | - | chr4_2:46937558-46937577 | Msa0602870:intron | 45.0% | |
| CAACACCAACAACCTGAACA+CGG | + | chr4_2:46937609-46937628 | None:intergenic | 45.0% | |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | - | chr4_2:46937610-46937629 | Msa0602870:intron | 45.0% |
| AGTCTTGGAGACCACTTTGA+AGG | - | chr4_2:46937639-46937658 | Msa0602870:intron | 45.0% | |
| CAAATCTCCAGCCTTCAAAG+TGG | + | chr4_2:46937653-46937672 | None:intergenic | 45.0% | |
| ! | CTGACAATGATGGAATGGAG+TGG | - | chr4_2:46937710-46937729 | Msa0602870:intron | 45.0% |
| CCAGCCATGTGTGTAAATAC+AGG | + | chr4_2:46938166-46938185 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | - | chr4_2:46938163-46938182 | Msa0602870:intron | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | - | chr4_2:46938174-46938193 | Msa0602870:intron | 45.0% | |
| CGGAAAAGCTTCTCAACTTC+TGG | + | chr4_2:46938250-46938269 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | + | chr4_2:46938270-46938289 | None:intergenic | 45.0% | |
| !! | AAAGTGTACGGTGGTGATGG+TGG | - | chr4_2:46936062-46936081 | Msa0602870:three_prime_UTR | 50.0% |
| !! | ATGGTGGATCGTACTACGCT+TGG | - | chr4_2:46936078-46936097 | Msa0602870:three_prime_UTR | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | + | chr4_2:46936107-46936126 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | - | chr4_2:46936110-46936129 | Msa0602870:exon | 50.0% | |
| GATACAGGAAGTGGAGTTGC+TGG | - | chr4_2:46937028-46937047 | Msa0602870:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | - | chr4_2:46937100-46937119 | Msa0602870:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | - | chr4_2:46937113-46937132 | Msa0602870:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | + | chr4_2:46937119-46937138 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | - | chr4_2:46937116-46937135 | Msa0602870:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | + | chr4_2:46937177-46937196 | None:intergenic | 50.0% |
| TGAGTTTGTGGGAAGGGCTT+GGG | - | chr4_2:46937264-46937283 | Msa0602870:CDS | 50.0% | |
| GTTGGAAAGCAATCCGCCAA+AGG | - | chr4_2:46937316-46937335 | Msa0602870:CDS | 50.0% | |
| GTTCCTCTTTAGGCTCAGGA+AGG | + | chr4_2:46937369-46937388 | None:intergenic | 50.0% | |
| !! | GAACTGTTTGGAGGCACCAT+TGG | - | chr4_2:46937408-46937427 | Msa0602870:intron | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | - | chr4_2:46937477-46937496 | Msa0602870:intron | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | + | chr4_2:46937483-46937502 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | - | chr4_2:46937481-46937500 | Msa0602870:intron | 50.0% |
| ! | AGAGAATCCAGGAGAGCACA+TGG | + | chr4_2:46937542-46937561 | None:intergenic | 50.0% |
| ! | TTGGAGACCACTTTGAAGGC+TGG | - | chr4_2:46937643-46937662 | Msa0602870:intron | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | - | chr4_2:46938183-46938202 | Msa0602870:intron | 50.0% |
| GCTATCACCTACAGTTCTGC+AGG | - | chr4_2:46938207-46938226 | Msa0602870:intron | 50.0% | |
| AAAGCAGCCTGCAGAACTGT+AGG | + | chr4_2:46938217-46938236 | None:intergenic | 50.0% | |
| ! | TCGGCGAAGAAAGTGTACGG+TGG | - | chr4_2:46936053-46936072 | Msa0602870:three_prime_UTR | 55.0% |
| CTGAGTTTGTGGGAAGGGCT+TGG | - | chr4_2:46937263-46937282 | Msa0602870:CDS | 55.0% | |
| CAGCCTTCCTGAGCCTAAAG+AGG | - | chr4_2:46937363-46937382 | Msa0602870:CDS | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | - | chr4_2:46937532-46937551 | Msa0602870:intron | 55.0% | |
| !! | AGTGGCCGTGTTCAGGTTGT+TGG | - | chr4_2:46937601-46937620 | Msa0602870:intron | 55.0% |
| TGGCTGGAAGTTCTTCGGTG+TGG | - | chr4_2:46938179-46938198 | Msa0602870:intron | 55.0% | |
| !! | GTGTCGGTGCCACGGAGAAT+AGG | + | chr4_2:46936377-46936396 | None:intergenic | 60.0% |
| TGTGGGAAGGGCTTGGGACT+TGG | - | chr4_2:46937270-46937289 | Msa0602870:CDS | 60.0% | |
| TAGGGGAAGTGGCCGTGTTC+AGG | - | chr4_2:46937594-46937613 | Msa0602870:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 46935795 | 46938642 | 46935795 | ID=Msa0602870;Name=Msa0602870 |
| chr4_2 | mRNA | 46935795 | 46938642 | 46935795 | ID=Msa0602870-mRNA-1;Parent=Msa0602870;Name=Msa0602870-mRNA-1;_AED=0.03;_eAED=0.03;_QI=234|1|1|1|1|1|3|327|356 |
| chr4_2 | exon | 46935795 | 46936275 | 46935795 | ID=Msa0602870-mRNA-1:exon:10715;Parent=Msa0602870-mRNA-1 |
| chr4_2 | exon | 46936682 | 46937402 | 46936682 | ID=Msa0602870-mRNA-1:exon:10714;Parent=Msa0602870-mRNA-1 |
| chr4_2 | exon | 46938213 | 46938642 | 46938213 | ID=Msa0602870-mRNA-1:exon:10713;Parent=Msa0602870-mRNA-1 |
| chr4_2 | five_prime_UTR | 46938409 | 46938642 | 46938409 | ID=Msa0602870-mRNA-1:five_prime_utr;Parent=Msa0602870-mRNA-1 |
| chr4_2 | CDS | 46938213 | 46938408 | 46938213 | ID=Msa0602870-mRNA-1:cds;Parent=Msa0602870-mRNA-1 |
| chr4_2 | CDS | 46936682 | 46937402 | 46936682 | ID=Msa0602870-mRNA-1:cds;Parent=Msa0602870-mRNA-1 |
| chr4_2 | CDS | 46936122 | 46936275 | 46936122 | ID=Msa0602870-mRNA-1:cds;Parent=Msa0602870-mRNA-1 |
| chr4_2 | three_prime_UTR | 46935795 | 46936121 | 46935795 | ID=Msa0602870-mRNA-1:three_prime_utr;Parent=Msa0602870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
