AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1012830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012830 MtrunA17_Chr7g0224251 98.000 100 2 0 1 100 1 100 3.48e-69 202
Msa1012830 MtrunA17_Chr7g0224241 98.020 101 2 0 1 101 1 101 7.86e-69 209
Msa1012830 MtrunA17_Chr8g0386041 65.000 100 35 0 1 100 1 100 2.00e-48 150
Msa1012830 MtrunA17_Chr7g0218501 54.808 104 44 2 3 103 4 107 2.89e-34 114
Msa1012830 MtrunA17_Chr6g0454091 55.556 99 43 1 7 104 8 106 6.60e-34 114
Msa1012830 MtrunA17_Chr7g0268701 52.041 98 45 2 4 100 5 101 3.97e-32 109
Msa1012830 MtrunA17_Chr8g0386071 53.704 54 25 0 48 101 20 73 9.39e-15 64.7
Msa1012830 MtrunA17_Chr8g0386061 53.488 43 20 0 1 43 1 43 3.02e-12 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012830 AT3G26980.1 75.758 99 24 0 1 99 1 99 1.67e-53 164
Msa1012830 AT4G24990.2 63.000 100 37 0 1 100 1 100 3.18e-47 147
Msa1012830 AT4G24990.1 63.000 100 37 0 1 100 1 100 3.18e-47 147
Msa1012830 AT1G77870.1 55.446 101 43 1 1 99 1 101 4.78e-34 114
Msa1012830 AT1G22050.1 53.125 96 44 1 3 97 4 99 5.18e-34 114
Msa1012830 AT5G15460.2 54.651 86 39 0 7 92 8 93 4.15e-31 107
Msa1012830 AT5G15460.1 54.651 86 39 0 7 92 8 93 4.15e-31 107
Msa1012830 AT5G15460.4 54.651 86 39 0 7 92 8 93 4.15e-31 107
Msa1012830 AT3G01050.2 50.000 86 43 0 7 92 8 93 4.51e-27 97.1
Msa1012830 AT3G01050.3 50.000 86 43 0 7 92 8 93 4.51e-27 97.1
Msa1012830 AT3G01050.1 50.000 86 43 0 7 92 8 93 4.51e-27 97.1
Msa1012830 AT3G01050.4 50.000 86 43 0 7 92 8 93 4.51e-27 97.1
Msa1012830 AT3G01050.5 50.000 86 43 0 7 92 8 93 4.51e-27 97.1
Msa1012830 AT5G15460.3 50.000 56 28 0 37 92 12 67 1.14e-13 62.0

Find 32 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAAATGCTGGCAAAATTT+TGG 0.148008 7_1:-18331815 Msa1012830:CDS
AAGCTGCTGATCGTGTTTGC+TGG 0.315060 7_1:-18329543 Msa1012830:CDS
TGTTGTCGTTCAGCCATCTT+TGG 0.348360 7_1:-18331722 Msa1012830:CDS
TATCTGATCCATCGTATATA+CGG 0.369078 7_1:+18334789 None:intergenic
ATATACGATGGATCAGATAT+TGG 0.380125 7_1:-18334785 Msa1012830:CDS
GGCCAATGTAGAGTACCTTT+TGG 0.427256 7_1:-18331775 Msa1012830:CDS
TGAAGTTGGTGAATAAGAAA+AGG 0.430837 7_1:+18334760 None:intergenic
AGCTCCACCAATTCATCATC+AGG 0.438663 7_1:+18334818 None:intergenic
CGAGATGCCTGATGATGAAT+TGG 0.447255 7_1:-18334825 Msa1012830:exon
TTAATATCACTTGCTGCCCT+TGG 0.457315 7_1:+18331841 None:intergenic
AGCATAGAAACAGTTGAAGT+TGG 0.470657 7_1:+18334746 None:intergenic
TCTTTGGCAAAAGCGAAAAC+AGG 0.475441 7_1:-18331706 Msa1012830:intron
AGCTGCTGATCGTGTTTGCT+GGG 0.487549 7_1:-18329542 Msa1012830:CDS
TTCAACTGTTTCTATGCTCA+AGG 0.504011 7_1:-18334741 Msa1012830:CDS
GATATTAAACTCATAAATGC+TGG 0.505519 7_1:-18331826 Msa1012830:CDS
GAAGTTGGTGAATAAGAAAA+GGG 0.509171 7_1:+18334761 None:intergenic
TGCTGGGATATCCGAGGTCA+TGG 0.547662 7_1:-18329526 Msa1012830:CDS
CCAGAAGGAAGCTCACCAAA+AGG 0.552790 7_1:+18331760 None:intergenic
CTGTTTCTATGCTCAAGGAA+AGG 0.586323 7_1:-18334736 Msa1012830:CDS
TGCATGGTGATGACCCCAGA+AGG 0.596413 7_1:+18331745 None:intergenic
CACCAAAAGGTACTCTACAT+TGG 0.603291 7_1:+18331773 None:intergenic
TTGGAGAACAACAAGACGGT+GGG 0.608984 7_1:-18331796 Msa1012830:CDS
GATGCCTGATGATGAATTGG+TGG 0.609921 7_1:-18334822 Msa1012830:CDS
AGACAAGAAAATTATACCAA+GGG 0.613126 7_1:-18331857 Msa1012830:CDS
CTGAAGTTCCGTATATACGA+TGG 0.627299 7_1:-18334797 Msa1012830:CDS
GCTACACATTTCCATGACCT+CGG 0.636425 7_1:+18329515 None:intergenic
TTGTTTGTAATAAGCAAACA+TGG 0.646664 7_1:+18334977 None:intergenic
CAGACAAGAAAATTATACCA+AGG 0.653948 7_1:-18331858 Msa1012830:CDS
CGTGTTTGCTGGGATATCCG+AGG 0.660455 7_1:-18329532 Msa1012830:CDS
TTTGGAGAACAACAAGACGG+TGG 0.663548 7_1:-18331797 Msa1012830:CDS
TGGCTGAACGACAACATGCA+TGG 0.679504 7_1:+18331729 None:intergenic
TTTGTAATAAGCAAACATGG+TGG 0.688014 7_1:+18334980 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATTAATTAACCTTT+GGG + chr7_1:18329954-18329973 None:intergenic 10.0%
!! TAATTAAATTAATTAACCTT+TGG + chr7_1:18329955-18329974 None:intergenic 10.0%
!!! CTTTTTTTTTTTTTTTTTTG+AGG - chr7_1:18330104-18330123 Msa1012830:intron 10.0%
!!! TTGTTTGAATTATTTAAAAT+AGG - chr7_1:18332481-18332500 Msa1012830:intron 10.0%
!! AAATAATAGAGATTTAAATA+AGG - chr7_1:18333069-18333088 Msa1012830:intron 10.0%
!! TATTAATTTATTTGTTTCAA+TGG - chr7_1:18333856-18333875 Msa1012830:intron 10.0%
!! TTAATATGTTTATTCTCAAA+TGG - chr7_1:18330910-18330929 Msa1012830:intron 15.0%
!! TAATATGTTTATTCTCAAAT+GGG - chr7_1:18330911-18330930 Msa1012830:intron 15.0%
!!! TTATTTAAAATAGGATAAGA+TGG - chr7_1:18332490-18332509 Msa1012830:intron 15.0%
!! TATAATTGAATGAAATAGAA+TGG + chr7_1:18332659-18332678 None:intergenic 15.0%
!!! AAAAGACACATTTTTATAAA+TGG + chr7_1:18332766-18332785 None:intergenic 15.0%
!! TTAAATCTCTATTATTTCAA+TGG + chr7_1:18333066-18333085 None:intergenic 15.0%
!! TCAAAATAATCCAATTATAT+TGG - chr7_1:18333114-18333133 Msa1012830:intron 15.0%
!! TTGTTTCAATATTATAAGAT+AGG + chr7_1:18333222-18333241 None:intergenic 15.0%
!!! TTAATATTTTGCAATTCTAT+GGG + chr7_1:18334213-18334232 None:intergenic 15.0%
!!! ATTAATATTTTGCAATTCTA+TGG + chr7_1:18334214-18334233 None:intergenic 15.0%
!! AGAATATAATGACATTAAAT+AGG + chr7_1:18334319-18334338 None:intergenic 15.0%
!!! ATTGATTTTTTAGCTGTTTT+TGG - chr7_1:18330326-18330345 Msa1012830:intron 20.0%
!! AATATGTTTATTCTCAAATG+GGG - chr7_1:18330912-18330931 Msa1012830:intron 20.0%
!!! AAAATGCTTTTGTATTCAAT+TGG - chr7_1:18331015-18331034 Msa1012830:intron 20.0%
!!! AAATGCTTTTGTATTCAATT+GGG - chr7_1:18331016-18331035 Msa1012830:intron 20.0%
!! CAACAAATATTAACGTTTAT+CGG + chr7_1:18331201-18331220 None:intergenic 20.0%
!!! AATATTTGTTGGATTAGTAA+TGG - chr7_1:18331210-18331229 Msa1012830:intron 20.0%
!! ACGTATACTTATTAATTGTT+TGG - chr7_1:18331368-18331387 Msa1012830:intron 20.0%
!! ATACATTACAAGAATTCTAT+TGG - chr7_1:18331476-18331495 Msa1012830:intron 20.0%
!! TATAAATAAGTGGTTAGATT+TGG - chr7_1:18331535-18331554 Msa1012830:intron 20.0%
!! AAAAATATTCCTGTTTAACT+CGG + chr7_1:18332093-18332112 None:intergenic 20.0%
!!! ATATTTTTTTTCCAACTGAT+TGG - chr7_1:18332105-18332124 Msa1012830:intron 20.0%
!!! TACTATTTCTTCTTCAATTT+GGG - chr7_1:18332542-18332561 Msa1012830:intron 20.0%
!! AGTATAAATACATTAACTTC+TGG + chr7_1:18333034-18333053 None:intergenic 20.0%
!! AATAGAGATTTAAATAAGGA+AGG - chr7_1:18333073-18333092 Msa1012830:intron 20.0%
!! CACAATAATACCAATATAAT+TGG + chr7_1:18333127-18333146 None:intergenic 20.0%
!! TATAATATTGAAACAACTGT+TGG - chr7_1:18333226-18333245 Msa1012830:intron 20.0%
!! ACAACCAAAATTAATTAACT+AGG + chr7_1:18333394-18333413 None:intergenic 20.0%
!! TTCCCCTAAAATAAATAATA+TGG + chr7_1:18333467-18333486 None:intergenic 20.0%
!!! ATTGGCTAAAAATTGAATTT+TGG - chr7_1:18333757-18333776 Msa1012830:intron 20.0%
!!! TTGGCTAAAAATTGAATTTT+GGG - chr7_1:18333758-18333777 Msa1012830:intron 20.0%
!! ATTTGTTTCAATGGAAAATT+TGG - chr7_1:18333865-18333884 Msa1012830:intron 20.0%
!!! ATTTTAGAATATTAACAGTG+TGG - chr7_1:18334394-18334413 Msa1012830:intron 20.0%
!!! TTTTAGAATATTAACAGTGT+GGG - chr7_1:18334395-18334414 Msa1012830:intron 20.0%
!!! ACAATTTTAGAGACAAAATT+AGG - chr7_1:18334552-18334571 Msa1012830:intron 20.0%
!! TCAATAATTATAATAAACCG+TGG + chr7_1:18334611-18334630 None:intergenic 20.0%
! TTGTTTGTAATAAGCAAACA+TGG + chr7_1:18329675-18329694 None:intergenic 25.0%
!!! TGTTAATCTGTGTTTTGTTT+TGG - chr7_1:18329998-18330017 Msa1012830:intron 25.0%
!!! GTTTTGTTTTGGTTTTTGTT+TGG - chr7_1:18330009-18330028 Msa1012830:intron 25.0%
!!! GTGGGTGTTTTTTATTTTTT+TGG - chr7_1:18330031-18330050 Msa1012830:intron 25.0%
!! TTTTATCTATGTCTACTTAC+AGG - chr7_1:18330251-18330270 Msa1012830:intron 25.0%
! ATAAGATTCTTTGCTTTATC+TGG - chr7_1:18331059-18331078 Msa1012830:intron 25.0%
!! AAAGAAAGCTTTACTGTTTT+TGG - chr7_1:18331152-18331171 Msa1012830:intron 25.0%
! CGATAAACGTTAATATTTGT+TGG - chr7_1:18331199-18331218 Msa1012830:intron 25.0%
!! GATTAGTAATGGAAACTATT+TGG - chr7_1:18331221-18331240 Msa1012830:intron 25.0%
! ATTCAAATGCTTAAAGATGT+GGG + chr7_1:18331288-18331307 None:intergenic 25.0%
! TATTCAAATGCTTAAAGATG+TGG + chr7_1:18331289-18331308 None:intergenic 25.0%
! AAGCATTTGAATATGAGTTA+TGG - chr7_1:18331296-18331315 Msa1012830:intron 25.0%
! AGCATTTGAATATGAGTTAT+GGG - chr7_1:18331297-18331316 Msa1012830:intron 25.0%
! AGAATTCTATTGGTCAATAA+AGG - chr7_1:18331486-18331505 Msa1012830:intron 25.0%
! TACATTTCGCTATAAATAAG+TGG - chr7_1:18331525-18331544 Msa1012830:intron 25.0%
! ATTGTATTAAGATGGATGAA+TGG - chr7_1:18331844-18331863 Msa1012830:CDS 25.0%
! TAGTTTCATTATCAAAATGC+TGG - chr7_1:18331927-18331946 Msa1012830:intron 25.0%
!!! TCATCTTTTTGACTTTTTGT+TGG - chr7_1:18332025-18332044 Msa1012830:intron 25.0%
!!! TTTTGACTTTTTGTTGGAAA+AGG - chr7_1:18332031-18332050 Msa1012830:intron 25.0%
! ATATCTGTATCATGATATTC+TGG - chr7_1:18332150-18332169 Msa1012830:intron 25.0%
!!! GTTTTGTTAGTAACATTAAC+TGG - chr7_1:18332172-18332191 Msa1012830:intron 25.0%
! AGAGTTATTACATCATATGT+AGG + chr7_1:18332242-18332261 None:intergenic 25.0%
! AAAGGTAATACATTTAGAAG+AGG + chr7_1:18332271-18332290 None:intergenic 25.0%
! TATCAAATATAGGTCACTAA+AGG + chr7_1:18332289-18332308 None:intergenic 25.0%
!!! TTGTCTGGTTCTTTATATTA+TGG - chr7_1:18332341-18332360 Msa1012830:intron 25.0%
! ATAATCCAAACATATGCTAA+GGG + chr7_1:18332423-18332442 None:intergenic 25.0%
! AATAATCCAAACATATGCTA+AGG + chr7_1:18332424-18332443 None:intergenic 25.0%
! TTAGCATATGTTTGGATTAT+TGG - chr7_1:18332423-18332442 Msa1012830:intron 25.0%
! ATATGTTTGGATTATTGGAA+AGG - chr7_1:18332428-18332447 Msa1012830:intron 25.0%
!! CTACTATTTCTTCTTCAATT+TGG - chr7_1:18332541-18332560 Msa1012830:intron 25.0%
! AGAAAACCGTTAAGAAATAA+GGG + chr7_1:18332740-18332759 None:intergenic 25.0%
! AAGAAAACCGTTAAGAAATA+AGG + chr7_1:18332741-18332760 None:intergenic 25.0%
! AGACAAGAAAATTATACCAA+GGG - chr7_1:18332792-18332811 Msa1012830:intron 25.0%
! GATATTAAACTCATAAATGC+TGG - chr7_1:18332823-18332842 Msa1012830:intron 25.0%
! AATCTCTATTATTTCAATGG+TGG + chr7_1:18333063-18333082 None:intergenic 25.0%
!! TTGGTATTATTGTGATTTTG+AGG - chr7_1:18333133-18333152 Msa1012830:intron 25.0%
!! TGGTATTATTGTGATTTTGA+GGG - chr7_1:18333134-18333153 Msa1012830:intron 25.0%
! CTCATTTATAAGCTGTTATT+TGG + chr7_1:18333370-18333389 None:intergenic 25.0%
! CAAATAACAGCTTATAAATG+AGG - chr7_1:18333368-18333387 Msa1012830:intron 25.0%
!!! AGGGCCATATTATTTATTTT+AGG - chr7_1:18333460-18333479 Msa1012830:intron 25.0%
!!! GGGCCATATTATTTATTTTA+GGG - chr7_1:18333461-18333480 Msa1012830:intron 25.0%
!!! GGCCATATTATTTATTTTAG+GGG - chr7_1:18333462-18333481 Msa1012830:intron 25.0%
! TAACATCTACTAAAACCTTA+TGG - chr7_1:18333610-18333629 Msa1012830:intron 25.0%
! TCATGAAACTAGAATTTCTT+TGG + chr7_1:18333679-18333698 None:intergenic 25.0%
! TTTAGCCAATATAGATTGAA+AGG + chr7_1:18333747-18333766 None:intergenic 25.0%
!! TGGCTAAAAATTGAATTTTG+GGG - chr7_1:18333759-18333778 Msa1012830:intron 25.0%
!!! GGGTATATTATTTTGTTTTG+TGG + chr7_1:18333956-18333975 None:intergenic 25.0%
! TTATGCAATAAGAAAACCTT+GGG + chr7_1:18334118-18334137 None:intergenic 25.0%
! TACAATTTCAAGGATCAAAT+TGG + chr7_1:18334145-18334164 None:intergenic 25.0%
! TGAAACCAAGTGAATAATAT+CGG + chr7_1:18334278-18334297 None:intergenic 25.0%
! ATATTCTTTGCAAATACCAA+TGG - chr7_1:18334332-18334351 Msa1012830:intron 25.0%
!! TTTAGAATATTAACAGTGTG+GGG - chr7_1:18334396-18334415 Msa1012830:intron 25.0%
TTTGTAATAAGCAAACATGG+TGG + chr7_1:18329672-18329691 None:intergenic 30.0%
TATCTGATCCATCGTATATA+CGG + chr7_1:18329863-18329882 None:intergenic 30.0%
ATATACGATGGATCAGATAT+TGG - chr7_1:18329864-18329883 Msa1012830:intron 30.0%
!! GAAGTTGGTGAATAAGAAAA+GGG + chr7_1:18329891-18329910 None:intergenic 30.0%
!! TGAAGTTGGTGAATAAGAAA+AGG + chr7_1:18329892-18329911 None:intergenic 30.0%
!!! TTGTTTTGGTTTTTGTTTGG+TGG - chr7_1:18330012-18330031 Msa1012830:intron 30.0%
!!! TGTTTTGGTTTTTGTTTGGT+GGG - chr7_1:18330013-18330032 Msa1012830:intron 30.0%
!!! TTTTAGCTGTTTTTGGTTGT+TGG - chr7_1:18330333-18330352 Msa1012830:intron 30.0%
!!! TTTAGCTGTTTTTGGTTGTT+GGG - chr7_1:18330334-18330353 Msa1012830:intron 30.0%
CCACTTTCTCAAATTACTAT+TGG + chr7_1:18330443-18330462 None:intergenic 30.0%
CCAATAGTAATTTGAGAAAG+TGG - chr7_1:18330440-18330459 Msa1012830:intron 30.0%
ACTGTTTGCATAAACTATCT+TGG - chr7_1:18330664-18330683 Msa1012830:intron 30.0%
!!! TGTTAATGGATTCTGTTTTG+AGG - chr7_1:18330871-18330890 Msa1012830:intron 30.0%
TTCAATTGGGTAGTTGAATT+AGG - chr7_1:18331029-18331048 Msa1012830:intron 30.0%
AATGTGATGTCATAAGCTAT+TGG - chr7_1:18331097-18331116 Msa1012830:intron 30.0%
ATGTGATGTCATAAGCTATT+GGG - chr7_1:18331098-18331117 Msa1012830:intron 30.0%
TTTATCGGTATTTCCTGAAA+CGG + chr7_1:18331186-18331205 None:intergenic 30.0%
! AGTAATGGAAACTATTTGGT+AGG - chr7_1:18331225-18331244 Msa1012830:intron 30.0%
TGAATATGAGTTATGGGAAT+TGG - chr7_1:18331303-18331322 Msa1012830:intron 30.0%
! AATAAGTGGTTAGATTTGGT+TGG - chr7_1:18331539-18331558 Msa1012830:intron 30.0%
AAAAATCCGCTACATAAACA+TGG + chr7_1:18331796-18331815 None:intergenic 30.0%
CATCTTAATACAATTACCAG+TGG + chr7_1:18331838-18331857 None:intergenic 30.0%
CACTGGTAATTGTATTAAGA+TGG - chr7_1:18331836-18331855 Msa1012830:CDS 30.0%
AGTCAAAAAGATGAGATTTC+TGG + chr7_1:18332019-18332038 None:intergenic 30.0%
TCTGAAAGAGAGTTTAGTAA+CGG + chr7_1:18332208-18332227 None:intergenic 30.0%
!! GGGAGTATTCTATCAAATAT+AGG + chr7_1:18332299-18332318 None:intergenic 30.0%
! TTTTTCCCTTAGCATATGTT+TGG - chr7_1:18332415-18332434 Msa1012830:intron 30.0%
AAGAAATAGTAGAAAGTGAG+TGG + chr7_1:18332533-18332552 None:intergenic 30.0%
TATTTCTTCTTCAATTTGGG+TGG - chr7_1:18332545-18332564 Msa1012830:intron 30.0%
! TGAGTCTTTTTCTCAAACAA+TGG - chr7_1:18332579-18332598 Msa1012830:intron 30.0%
TTGAACGAAATGAAATGAGA+GGG + chr7_1:18332620-18332639 None:intergenic 30.0%
ATTGAACGAAATGAAATGAG+AGG + chr7_1:18332621-18332640 None:intergenic 30.0%
AGAATATAGCACTAAAGCAA+CGG + chr7_1:18332714-18332733 None:intergenic 30.0%
! TCTTGTCCCTTATTTCTTAA+CGG - chr7_1:18332731-18332750 Msa1012830:intron 30.0%
CAGACAAGAAAATTATACCA+AGG - chr7_1:18332791-18332810 Msa1012830:intron 30.0%
! CATAAATGCTGGCAAAATTT+TGG - chr7_1:18332834-18332853 Msa1012830:intron 30.0%
!! AATTTTGGAGAACAACAAGA+CGG - chr7_1:18332849-18332868 Msa1012830:intron 30.0%
AGAGATTTAAATAAGGAAGG+AGG - chr7_1:18333076-18333095 Msa1012830:intron 30.0%
! GAGGCCTAGTTAATTAATTT+TGG - chr7_1:18333387-18333406 Msa1012830:intron 30.0%
! TAGTTGCTCCTTTTAATCTT+AGG - chr7_1:18333440-18333459 Msa1012830:intron 30.0%
! AGTTGCTCCTTTTAATCTTA+GGG - chr7_1:18333441-18333460 Msa1012830:intron 30.0%
AATATGGCCCTAAGATTAAA+AGG + chr7_1:18333451-18333470 None:intergenic 30.0%
AAGTTTGAACAGTTTCCAAA+CGG + chr7_1:18333574-18333593 None:intergenic 30.0%
!! TGAACTTGTTTAGTGTTTTG+TGG - chr7_1:18333696-18333715 Msa1012830:intron 30.0%
TACCTCCTTTCAATCTATAT+TGG - chr7_1:18333739-18333758 Msa1012830:intron 30.0%
ACAGATTCACTTCTAATTCT+AGG + chr7_1:18333788-18333807 None:intergenic 30.0%
!! TGGATTAGTACTTATTGTTG+TGG - chr7_1:18333885-18333904 Msa1012830:intron 30.0%
!!! TCATGATCACTGTTACTTTT+AGG - chr7_1:18334081-18334100 Msa1012830:intron 30.0%
!!! CATGATCACTGTTACTTTTA+GGG - chr7_1:18334082-18334101 Msa1012830:intron 30.0%
!!! ACTGTTACTTTTAGGGATTA+GGG - chr7_1:18334089-18334108 Msa1012830:intron 30.0%
TATGCAATAAGAAAACCTTG+GGG + chr7_1:18334117-18334136 None:intergenic 30.0%
CTTATGCAATAAGAAAACCT+TGG + chr7_1:18334119-18334138 None:intergenic 30.0%
GATACACTCTTACAATTTCA+AGG + chr7_1:18334155-18334174 None:intergenic 30.0%
TATCTCCGATATTATTCACT+TGG - chr7_1:18334270-18334289 Msa1012830:intron 30.0%
TTAGAATATTAACAGTGTGG+GGG - chr7_1:18334397-18334416 Msa1012830:intron 30.0%
!! TTTGGCAGATTAAGTTGATA+TGG - chr7_1:18334525-18334544 Msa1012830:intron 30.0%
AGAGACAAAATTAGGTATTC+AGG - chr7_1:18334560-18334579 Msa1012830:intron 30.0%
AATTATAATAAACCGTGGCA+AGG + chr7_1:18334606-18334625 None:intergenic 30.0%
! TTCACTGTAGTTACTTTACT+AGG - chr7_1:18334793-18334812 Msa1012830:CDS 30.0%
! GTAGTTACTTTACTAGGTAA+TGG - chr7_1:18334799-18334818 Msa1012830:CDS 30.0%
CTGAATACAATTGTATGTGT+CGG + chr7_1:18334916-18334935 None:intergenic 30.0%
! ACGATACACTGATTGTAATT+AGG + chr7_1:18334951-18334970 None:intergenic 30.0%
AATCACAACTAACACATATC+CGG + chr7_1:18334976-18334995 None:intergenic 30.0%
!!! ATCTACTTTTTTCTCTGTTC+AGG + chr7_1:18335023-18335042 None:intergenic 30.0%
! TACCCAGAAAACATTTTTGT+GGG - chr7_1:18335047-18335066 Msa1012830:five_prime_UTR 30.0%
AGCATAGAAACAGTTGAAGT+TGG + chr7_1:18329906-18329925 None:intergenic 35.0%
!! TTCAACTGTTTCTATGCTCA+AGG - chr7_1:18329908-18329927 Msa1012830:intron 35.0%
! AGGAAAGGATTTTTGCTGAA+TGG - chr7_1:18329928-18329947 Msa1012830:intron 35.0%
! AAGCATTCAATCAGAAGTGT+CGG + chr7_1:18330163-18330182 None:intergenic 35.0%
!!! GCTACTGACATGGTTTTATT+TGG - chr7_1:18330547-18330566 Msa1012830:intron 35.0%
AGTGACTATGTCTGTAGATA+AGG - chr7_1:18330767-18330786 Msa1012830:intron 35.0%
AAACCCCTTATATACCTAAG+GGG + chr7_1:18330816-18330835 None:intergenic 35.0%
GAAACCCCTTATATACCTAA+GGG + chr7_1:18330817-18330836 None:intergenic 35.0%
AGAAACCCCTTATATACCTA+AGG + chr7_1:18330818-18330837 None:intergenic 35.0%
! TTGTGTTTGATGCTCTTTTG+TGG - chr7_1:18330845-18330864 Msa1012830:intron 35.0%
!!! TTTGGTTTTTGAACCGTTTC+AGG - chr7_1:18331170-18331189 Msa1012830:intron 35.0%
TTTATCCAGAAAAGGTTCAG+TGG - chr7_1:18331249-18331268 Msa1012830:intron 35.0%
GTGTTCTATGCTACAAGATT+TGG - chr7_1:18331450-18331469 Msa1012830:intron 35.0%
TGGTTGGCAAATGGTTATAA+AGG - chr7_1:18331555-18331574 Msa1012830:intron 35.0%
TGGTTATAAAGGTCACTGAA+AGG - chr7_1:18331566-18331585 Msa1012830:intron 35.0%
GCGGATAAAATAGTTGTTGT+TGG + chr7_1:18331748-18331767 None:intergenic 35.0%
GCAATACCATGTTTATGTAG+CGG - chr7_1:18331787-18331806 Msa1012830:CDS 35.0%
CTTAATACAATTACCAGTGG+AGG + chr7_1:18331835-18331854 None:intergenic 35.0%
CTATCGAAATCTTCTCTCTA+AGG + chr7_1:18331910-18331929 None:intergenic 35.0%
GCTACTTGCAATTATGTTTC+AGG - chr7_1:18332127-18332146 Msa1012830:intron 35.0%
!!! AGTTTTTTACTATCGACGCA+TGG - chr7_1:18332376-18332395 Msa1012830:intron 35.0%
!!! GTTTTTTACTATCGACGCAT+GGG - chr7_1:18332377-18332396 Msa1012830:intron 35.0%
!!! TTTTTTACTATCGACGCATG+GGG - chr7_1:18332378-18332397 Msa1012830:intron 35.0%
TATGCTAAGGGAAAAATCAC+AGG + chr7_1:18332411-18332430 None:intergenic 35.0%
TAGTAGAAAGTGAGTGGAAT+AGG + chr7_1:18332527-18332546 None:intergenic 35.0%
ATTGGATATTATGCGATGAG+TGG + chr7_1:18332689-18332708 None:intergenic 35.0%
TGACATTTGTGTAAACCACA+GGG + chr7_1:18333504-18333523 None:intergenic 35.0%
AGCCAATATAGATTGAAAGG+AGG + chr7_1:18333744-18333763 None:intergenic 35.0%
!!! ATTTTGTTTTGTGGTACCAC+CGG + chr7_1:18333947-18333966 None:intergenic 35.0%
GTCACTGATGTTCTTGAAAA+TGG - chr7_1:18333982-18334001 Msa1012830:intron 35.0%
ACTGATGTTCTTGAAAATGG+TGG - chr7_1:18333985-18334004 Msa1012830:intron 35.0%
CTGATGTTCTTGAAAATGGT+GGG - chr7_1:18333986-18334005 Msa1012830:intron 35.0%
AGTGATCATGACATGTAGTT+GGG + chr7_1:18334072-18334091 None:intergenic 35.0%
!!! CACTGTTACTTTTAGGGATT+AGG - chr7_1:18334088-18334107 Msa1012830:intron 35.0%
ATAATGAACATGTGCAGACT+AGG + chr7_1:18334180-18334199 None:intergenic 35.0%
! TGCAATTCTATGGGTCATTT+TGG + chr7_1:18334204-18334223 None:intergenic 35.0%
ACATTAAATAGGCAGTGTCA+GGG + chr7_1:18334308-18334327 None:intergenic 35.0%
TTCTTTGCAAATACCAATGG+AGG - chr7_1:18334335-18334354 Msa1012830:intron 35.0%
TCTTTGCAAATACCAATGGA+GGG - chr7_1:18334336-18334355 Msa1012830:intron 35.0%
! TCATTTTAGACACCTTCCTT+AGG - chr7_1:18334673-18334692 Msa1012830:intron 35.0%
TAAAATGTCAATGCAGACAG+GGG + chr7_1:18334705-18334724 None:intergenic 35.0%
CTAAAATGTCAATGCAGACA+GGG + chr7_1:18334706-18334725 None:intergenic 35.0%
! TCTAAAATGTCAATGCAGAC+AGG + chr7_1:18334707-18334726 None:intergenic 35.0%
! ATTTTAGACGCGTTCTCAAA+AGG - chr7_1:18334719-18334738 Msa1012830:CDS 35.0%
!! ACTGACTCTTTGAAACATTG+CGG + chr7_1:18334774-18334793 None:intergenic 35.0%
AGGCGTTCAATATAAAGTGT+TGG + chr7_1:18334861-18334880 None:intergenic 35.0%
! GTACCCAGAAAACATTTTTG+TGG - chr7_1:18335046-18335065 Msa1012830:five_prime_UTR 35.0%
! CACCCACAAAAATGTTTTCT+GGG + chr7_1:18335052-18335071 None:intergenic 35.0%
! ACACCCACAAAAATGTTTTC+TGG + chr7_1:18335053-18335072 None:intergenic 35.0%
CTGAAGTTCCGTATATACGA+TGG - chr7_1:18329852-18329871 Msa1012830:intron 40.0%
!! CTGTTTCTATGCTCAAGGAA+AGG - chr7_1:18329913-18329932 Msa1012830:intron 40.0%
! ATTTTTGCTGAATGGCCCAA+AGG - chr7_1:18329936-18329955 Msa1012830:intron 40.0%
! TATTGGTGTCTGACATGTGT+CGG + chr7_1:18330426-18330445 None:intergenic 40.0%
!! TATATACCTAAGGGGGTGTT+TGG + chr7_1:18330808-18330827 None:intergenic 40.0%
AACACCCCCTTAGGTATATA+AGG - chr7_1:18330808-18330827 Msa1012830:intron 40.0%
ACACCCCCTTAGGTATATAA+GGG - chr7_1:18330809-18330828 Msa1012830:intron 40.0%
AACCCCTTATATACCTAAGG+GGG + chr7_1:18330815-18330834 None:intergenic 40.0%
! TGTTTGATGCTCTTTTGTGG+AGG - chr7_1:18330848-18330867 Msa1012830:intron 40.0%
!!! CTCTTTTGTGGAGGTGTTAA+TGG - chr7_1:18330857-18330876 Msa1012830:intron 40.0%
! TGGTAGGCTTTATCCAGAAA+AGG - chr7_1:18331241-18331260 Msa1012830:intron 40.0%
! TATCACCACTGAACCTTTTC+TGG + chr7_1:18331257-18331276 None:intergenic 40.0%
! GGTTAGATTTGGTTGGCAAA+TGG - chr7_1:18331546-18331565 Msa1012830:intron 40.0%
GCTATGTCATCACTTTCTTG+TGG - chr7_1:18331615-18331634 Msa1012830:intron 40.0%
GTATTGTCAAATTGCCTCCA+TGG - chr7_1:18331694-18331713 Msa1012830:intron 40.0%
AAATTGCCTCCATGGCATTA+TGG - chr7_1:18331702-18331721 Msa1012830:intron 40.0%
TTCAACATGCCATAATGCCA+TGG + chr7_1:18331714-18331733 None:intergenic 40.0%
AAACATGGTATTGCAGCCTA+TGG + chr7_1:18331781-18331800 None:intergenic 40.0%
CAATTACCAGTGGAGGATTA+TGG + chr7_1:18331828-18331847 None:intergenic 40.0%
TAGGCATTTAGAAGACCTGT+AGG - chr7_1:18331972-18331991 Msa1012830:intron 40.0%
AGGCATTTAGAAGACCTGTA+GGG - chr7_1:18331973-18331992 Msa1012830:intron 40.0%
ATTGCAAGTAGCCAATCAGT+TGG + chr7_1:18332119-18332138 None:intergenic 40.0%
TTGTAGACGGCAACATCAAA+GGG + chr7_1:18332319-18332338 None:intergenic 40.0%
TCTTCTTCAATTTGGGTGGA+TGG - chr7_1:18332549-18332568 Msa1012830:intron 40.0%
TTCAATTTGGGTGGATGGTA+TGG - chr7_1:18332554-18332573 Msa1012830:intron 40.0%
AGCACTAAAGCAACGGTAAT+TGG + chr7_1:18332707-18332726 None:intergenic 40.0%
! TTAATATCACTTGCTGCCCT+TGG + chr7_1:18332811-18332830 None:intergenic 40.0%
!! CACCAAAAGGTACTCTACAT+TGG + chr7_1:18332879-18332898 None:intergenic 40.0%
!! GTTTTCGCTTTTGCCAAAGA+TGG + chr7_1:18332943-18332962 None:intergenic 40.0%
TCTTTGGCAAAAGCGAAAAC+AGG - chr7_1:18332943-18332962 Msa1012830:intron 40.0%
GACATTTGTGTAAACCACAG+GGG + chr7_1:18333503-18333522 None:intergenic 40.0%
GTGACATTTGTGTAAACCAC+AGG + chr7_1:18333505-18333524 None:intergenic 40.0%
AGTATGTGCTTGGGAATAGA+GGG + chr7_1:18333535-18333554 None:intergenic 40.0%
TAGGAAACGTTCAAGCCATA+AGG + chr7_1:18333628-18333647 None:intergenic 40.0%
TTATGGCTTGAACGTTTCCT+AGG - chr7_1:18333627-18333646 Msa1012830:intron 40.0%
!! TGGGACATAGCTTGTGATTT+TGG - chr7_1:18334005-18334024 Msa1012830:intron 40.0%
!! GCTTGTGATTTTGGTATACC+TGG - chr7_1:18334014-18334033 Msa1012830:intron 40.0%
CATACCTATGATTCTCTGCT+GGG - chr7_1:18334037-18334056 Msa1012830:intron 40.0%
AAAACCCAGCAGAGAATCAT+AGG + chr7_1:18334044-18334063 None:intergenic 40.0%
CAGTGATCATGACATGTAGT+TGG + chr7_1:18334073-18334092 None:intergenic 40.0%
TGATAACAGAGCAAGACTGA+GGG + chr7_1:18334246-18334265 None:intergenic 40.0%
! TTGATAACAGAGCAAGACTG+AGG + chr7_1:18334247-18334266 None:intergenic 40.0%
GACATTAAATAGGCAGTGTC+AGG + chr7_1:18334309-18334328 None:intergenic 40.0%
GGGGGATTAATTAATGACGT+AGG - chr7_1:18334415-18334434 Msa1012830:intron 40.0%
ATTATAAGCACTCCTTGCCA+CGG - chr7_1:18334591-18334610 Msa1012830:intron 40.0%
! TTTTAGACACCTTCCTTAGG+TGG - chr7_1:18334676-18334695 Msa1012830:intron 40.0%
AAAATGTCAATGCAGACAGG+GGG + chr7_1:18334704-18334723 None:intergenic 40.0%
! GGTAATGGTTGTTGCTAACT+AGG - chr7_1:18334814-18334833 Msa1012830:CDS 40.0%
TACAATCAGTGTATCGTGTC+CGG - chr7_1:18334954-18334973 Msa1012830:five_prime_UTR 40.0%
ATTGTGAAAAGCCAGTCACA+TGG - chr7_1:18335078-18335097 Msa1012830:five_prime_UTR 40.0%
! CGAGATGCCTGATGATGAAT+TGG - chr7_1:18329824-18329843 Msa1012830:intron 45.0%
! GATGCCTGATGATGAATTGG+TGG - chr7_1:18329827-18329846 Msa1012830:intron 45.0%
AGCTCCACCAATTCATCATC+AGG + chr7_1:18329834-18329853 None:intergenic 45.0%
TCACATGTGTTGTGTCGTGT+CGG + chr7_1:18330202-18330221 None:intergenic 45.0%
GCTATGTAGCACTAACATGC+AGG - chr7_1:18330363-18330382 Msa1012830:intron 45.0%
! AAGTGTCAGTGCTACTGACA+TGG - chr7_1:18330537-18330556 Msa1012830:intron 45.0%
CACCCCCTTAGGTATATAAG+GGG - chr7_1:18330810-18330829 Msa1012830:intron 45.0%
AACATGCCATAATGCCATGG+AGG + chr7_1:18331711-18331730 None:intergenic 45.0%
GGCATTTAGAAGACCTGTAG+GGG - chr7_1:18331974-18331993 Msa1012830:intron 45.0%
ACACTGCATCCGAGTTAAAC+AGG - chr7_1:18332081-18332100 Msa1012830:intron 45.0%
CTTGTAGACGGCAACATCAA+AGG + chr7_1:18332320-18332339 None:intergenic 45.0%
CTTTGATGTTGCCGTCTACA+AGG - chr7_1:18332318-18332337 Msa1012830:intron 45.0%
GAACCAGACAACCTTGTAGA+CGG + chr7_1:18332332-18332351 None:intergenic 45.0%
TTTGGAGAACAACAAGACGG+TGG - chr7_1:18332852-18332871 Msa1012830:intron 45.0%
TTGGAGAACAACAAGACGGT+GGG - chr7_1:18332853-18332872 Msa1012830:intron 45.0%
!! GGCCAATGTAGAGTACCTTT+TGG - chr7_1:18332874-18332893 Msa1012830:intron 45.0%
! CTTTTGGTGAGCTTCCTTCT+GGG - chr7_1:18332890-18332909 Msa1012830:intron 45.0%
! TTTTGGTGAGCTTCCTTCTG+GGG - chr7_1:18332891-18332910 Msa1012830:intron 45.0%
TGTTGTCGTTCAGCCATCTT+TGG - chr7_1:18332927-18332946 Msa1012830:intron 45.0%
ATTTGTGTAAACCACAGGGG+AGG + chr7_1:18333500-18333519 None:intergenic 45.0%
TATGTGCTTGGGAATAGAGG+GGG + chr7_1:18333533-18333552 None:intergenic 45.0%
GTATGTGCTTGGGAATAGAG+GGG + chr7_1:18333534-18333553 None:intergenic 45.0%
GAGTATGTGCTTGGGAATAG+AGG + chr7_1:18333536-18333555 None:intergenic 45.0%
AGAACATCAGTGACTCGTGT+GGG + chr7_1:18333976-18333995 None:intergenic 45.0%
AAGAACATCAGTGACTCGTG+TGG + chr7_1:18333977-18333996 None:intergenic 45.0%
CAGAGAATCATAGGTATGCC+AGG + chr7_1:18334035-18334054 None:intergenic 45.0%
GCATACCTATGATTCTCTGC+TGG - chr7_1:18334036-18334055 Msa1012830:intron 45.0%
TGCAAATACCAATGGAGGGA+TGG - chr7_1:18334340-18334359 Msa1012830:intron 45.0%
AATCATGTCCATCCCTCCAT+TGG + chr7_1:18334351-18334370 None:intergenic 45.0%
!! ATAAAGTGTTGGTGCTGCGT+AGG + chr7_1:18334850-18334869 None:intergenic 45.0%
CAGCTTAACATCCATGTGAC+TGG + chr7_1:18335092-18335111 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - chr7_1:18330105-18330124 Msa1012830:intron 5.0%
ACCTCAAACCCTGTGAAGCA+CGG + chr7_1:18330297-18330316 None:intergenic 50.0%
AACATGCAGGTGCAAACACC+TGG - chr7_1:18330376-18330395 Msa1012830:intron 50.0%
AGGTGCAAACACCTGGACAT+TGG - chr7_1:18330383-18330402 Msa1012830:intron 50.0%
ACACATCGTGTCCAATGTCC+AGG + chr7_1:18330397-18330416 None:intergenic 50.0%
!! ACCTAAGGGGGTGTTTGGAT+TGG + chr7_1:18330803-18330822 None:intergenic 50.0%
ATCCGCCATGTTTCCACCAT+AGG - chr7_1:18331762-18331781 Msa1012830:CDS 50.0%
! AGCCTATGGTGGAAACATGG+CGG + chr7_1:18331767-18331786 None:intergenic 50.0%
! TGCAGCCTATGGTGGAAACA+TGG + chr7_1:18331770-18331789 None:intergenic 50.0%
CATGGTATTGCAGCCTATGG+TGG + chr7_1:18331778-18331797 None:intergenic 50.0%
TTGCTGCCATAATCCTCCAC+TGG - chr7_1:18331819-18331838 Msa1012830:CDS 50.0%
! AGTCTCGTCTAAGGTGGTCT+AGG - chr7_1:18331953-18331972 Msa1012830:intron 50.0%
GTACTAACTAGTGCCCCTAC+AGG + chr7_1:18331990-18332009 None:intergenic 50.0%
TTGCCGTCTACAAGGTTGTC+TGG - chr7_1:18332326-18332345 Msa1012830:intron 50.0%
CCAGAAGGAAGCTCACCAAA+AGG + chr7_1:18332892-18332911 None:intergenic 50.0%
! CCTTTTGGTGAGCTTCCTTC+TGG - chr7_1:18332889-18332908 Msa1012830:intron 50.0%
TGGCTGAACGACAACATGCA+TGG + chr7_1:18332923-18332942 None:intergenic 50.0%
! CTGTAGGGGAGTATGTGCTT+GGG + chr7_1:18333544-18333563 None:intergenic 50.0%
! ACTGTAGGGGAGTATGTGCT+TGG + chr7_1:18333545-18333564 None:intergenic 50.0%
CAAACGGTGCAAGACTGTAG+GGG + chr7_1:18333558-18333577 None:intergenic 50.0%
CCAAACGGTGCAAGACTGTA+GGG + chr7_1:18333559-18333578 None:intergenic 50.0%
TCCAAACGGTGCAAGACTGT+AGG + chr7_1:18333560-18333579 None:intergenic 50.0%
! TTGGTGTCTCTATCGCTGCA+GGG + chr7_1:18333660-18333679 None:intergenic 50.0%
!! TTTGGTGTCTCTATCGCTGC+AGG + chr7_1:18333661-18333680 None:intergenic 50.0%
! AAACCTTGTGTCACTCCCAC+CGG - chr7_1:18333925-18333944 Msa1012830:intron 50.0%
! TGTTTTGTGGTACCACCGGT+GGG + chr7_1:18333943-18333962 None:intergenic 50.0%
!! TTGTTTTGTGGTACCACCGG+TGG + chr7_1:18333944-18333963 None:intergenic 50.0%
! TTAGGGATTAGGGTACCCCA+AGG - chr7_1:18334099-18334118 Msa1012830:intron 50.0%
ATGACGTAGGATCTGCCACT+TGG - chr7_1:18334428-18334447 Msa1012830:intron 50.0%
! TGACGTAGGATCTGCCACTT+GGG - chr7_1:18334429-18334448 Msa1012830:intron 50.0%
!! ATAGGAGGGGTGCTAGACTA+CGG + chr7_1:18334459-18334478 None:intergenic 50.0%
ACCTCCATTGCACATAGGAG+GGG + chr7_1:18334472-18334491 None:intergenic 50.0%
GACCTCCATTGCACATAGGA+GGG + chr7_1:18334473-18334492 None:intergenic 50.0%
TGACCTCCATTGCACATAGG+AGG + chr7_1:18334474-18334493 None:intergenic 50.0%
GAGTGACCTCCATTGCACAT+AGG + chr7_1:18334477-18334496 None:intergenic 50.0%
AAGCTGCTGATCGTGTTTGC+TGG - chr7_1:18335106-18335125 Msa1012830:five_prime_UTR 50.0%
AGCTGCTGATCGTGTTTGCT+GGG - chr7_1:18335107-18335126 Msa1012830:five_prime_UTR 50.0%
GTGAAGCACGGACACAGACA+CGG + chr7_1:18330285-18330304 None:intergenic 55.0%
TGTCTGTGTCCGTGCTTCAC+AGG - chr7_1:18330285-18330304 Msa1012830:intron 55.0%
GTCTGTGTCCGTGCTTCACA+GGG - chr7_1:18330286-18330305 Msa1012830:intron 55.0%
TCCGTGCTTCACAGGGTTTG+AGG - chr7_1:18330293-18330312 Msa1012830:intron 55.0%
GCCAATCCAAACACCCCCTT+AGG - chr7_1:18330799-18330818 Msa1012830:intron 55.0%
! TGCTGGCTGAGTCTCGTCTA+AGG - chr7_1:18331944-18331963 Msa1012830:intron 55.0%
TGGCTGAGTCTCGTCTAAGG+TGG - chr7_1:18331947-18331966 Msa1012830:intron 55.0%
! TGCATGGTGATGACCCCAGA+AGG + chr7_1:18332907-18332926 None:intergenic 55.0%
AATTACACGCACCTCCCCTG+TGG - chr7_1:18333486-18333505 Msa1012830:intron 55.0%
CCCTACAGTCTTGCACCGTT+TGG - chr7_1:18333556-18333575 Msa1012830:intron 55.0%
TAGACTACGGTCTGCCCAAG+TGG + chr7_1:18334446-18334465 None:intergenic 55.0%
AGCACCCCTCCTATGTGCAA+TGG - chr7_1:18334465-18334484 Msa1012830:intron 55.0%
ACCCCTCCTATGTGCAATGG+AGG - chr7_1:18334468-18334487 Msa1012830:intron 55.0%
!! TGGTGCTGCGTAGGTCACAA+TGG + chr7_1:18334841-18334860 None:intergenic 55.0%
GCATGTGTCGGACAGCAAAC+AGG + chr7_1:18334881-18334900 None:intergenic 55.0%
!! GTTTGCTGTCCGACACATGC+CGG - chr7_1:18334881-18334900 Msa1012830:five_prime_UTR 55.0%
! TATGTGTCGGTGTCCGACAC+CGG + chr7_1:18334903-18334922 None:intergenic 55.0%
! CGTGTTTGCTGGGATATCCG+AGG - chr7_1:18335117-18335136 Msa1012830:five_prime_UTR 55.0%
TGCTGGGATATCCGAGGTCA+TGG - chr7_1:18335123-18335142 Msa1012830:five_prime_UTR 55.0%
CGCTGCAGGGATGACAACCT+AGG + chr7_1:18333647-18333666 None:intergenic 60.0%
TGTCCGACACATGCCGGTGT+CGG - chr7_1:18334887-18334906 Msa1012830:five_prime_UTR 60.0%
TGTCCGACACCGGCATGTGT+CGG + chr7_1:18334893-18334912 None:intergenic 60.0%
CCACCGGTGGGAGTGACACA+AGG + chr7_1:18333931-18333950 None:intergenic 65.0%
! CCTTGTGTCACTCCCACCGG+TGG - chr7_1:18333928-18333947 Msa1012830:intron 65.0%
!! CAGGGGGTGCCACCTAAGGA+AGG + chr7_1:18334688-18334707 None:intergenic 65.0%
!! CAGACAGGGGGTGCCACCTA+AGG + chr7_1:18334692-18334711 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 18329516 18335155 18329516 ID=Msa1012830;Name=Msa1012830
chr7_1 mRNA 18329516 18335155 18329516 ID=Msa1012830-mRNA-1;Parent=Msa1012830;Name=Msa1012830-mRNA-1;_AED=0.19;_eAED=0.24;_QI=312|0.5|0.66|1|0.5|0.66|3|0|115
chr7_1 exon 18329516 18329562 18329516 ID=Msa1012830-mRNA-1:exon:4594;Parent=Msa1012830-mRNA-1
chr7_1 exon 18331707 18331877 18331707 ID=Msa1012830-mRNA-1:exon:4593;Parent=Msa1012830-mRNA-1
chr7_1 exon 18334714 18335155 18334714 ID=Msa1012830-mRNA-1:exon:4592;Parent=Msa1012830-mRNA-1
chr7_1 five_prime_UTR 18334844 18335155 18334844 ID=Msa1012830-mRNA-1:five_prime_utr;Parent=Msa1012830-mRNA-1
chr7_1 CDS 18334714 18334843 18334714 ID=Msa1012830-mRNA-1:cds;Parent=Msa1012830-mRNA-1
chr7_1 CDS 18331707 18331877 18331707 ID=Msa1012830-mRNA-1:cds;Parent=Msa1012830-mRNA-1
chr7_1 CDS 18329516 18329562 18329516 ID=Msa1012830-mRNA-1:cds;Parent=Msa1012830-mRNA-1
Gene Sequence

>Msa1012830

ATGCCTGATGATGAATTGGTGGAGCTGAAGTTCCGTATATACGATGGATCAGATATTGGACCCTTTTCTTATTCACCAACTTCAACTGTTTCTATGCTCAAGGAAAGGATTTTTGCTGAATGGCCCAAAGACAAGAAAATTATACCAAGGGCAGCAAGTGATATTAAACTCATAAATGCTGGCAAAATTTTGGAGAACAACAAGACGGTGGGCCAATGTAGAGTACCTTTTGGTGAGCTTCCTTCTGGGGTCATCACCATGCATGTTGTCGTTCAGCCATCTTTGGCAAAAGCGAAAACAGCTGCTGATCGTGTTTGCTGGGATATCCGAGGTCATGGAAATGTGTAG

Protein sequence

>Msa1012830

MPDDELVELKFRIYDGSDIGPFSYSPTSTVSMLKERIFAEWPKDKKIIPRAASDIKLINAGKILENNKTVGQCRVPFGELPSGVITMHVVVQPSLAKAKTAADRVCWDIRGHGNV*