Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670660 | XP_013455002.1 | 94.667 | 75 | 4 | 0 | 1 | 75 | 1 | 75 | 1.42e-41 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670660 | sp|P20830|MT1_PEA | 90.667 | 75 | 7 | 0 | 1 | 75 | 1 | 75 | 1.05e-42 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670660 | A0A072UT35 | 94.667 | 75 | 4 | 0 | 1 | 75 | 1 | 75 | 6.78e-42 | 140 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa0670660 | -0.806317 | 8.723705e-50 | -8.615850e-47 |
| Msa0004840 | Msa0670660 | 0.815858 | 7.452944e-52 | -8.615850e-47 |
| Msa0011720 | Msa0670660 | 0.804399 | 2.201058e-49 | -8.615850e-47 |
| Msa0014800 | Msa0670660 | 0.812264 | 4.628306e-51 | -8.615850e-47 |
| Msa0029850 | Msa0670660 | 0.816385 | 5.683016e-52 | -8.615850e-47 |
| Msa0042980 | Msa0670660 | -0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0048000 | Msa0670660 | 0.811278 | 7.584083e-51 | -8.615850e-47 |
| Msa0050730 | Msa0670660 | 0.855808 | 4.918982e-62 | -8.615850e-47 |
| Msa0050760 | Msa0670660 | 0.864660 | 1.035997e-64 | -8.615850e-47 |
| Msa0051860 | Msa0670660 | 0.816093 | 6.606556e-52 | -8.615850e-47 |
| Msa0051930 | Msa0670660 | 0.813895 | 2.030732e-51 | -8.615850e-47 |
| Msa0052030 | Msa0670660 | 0.821167 | 4.662137e-53 | -8.615850e-47 |
| Msa0061150 | Msa0670660 | 0.833169 | 6.221473e-56 | -8.615850e-47 |
| Msa0071240 | Msa0670660 | 0.806660 | 7.384526e-50 | -8.615850e-47 |
| Msa0077180 | Msa0670660 | 0.824498 | 7.811439e-54 | -8.615850e-47 |
| Msa0078750 | Msa0670660 | 0.870149 | 1.815148e-66 | -8.615850e-47 |
| Msa0089360 | Msa0670660 | 0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa0092990 | Msa0670660 | 0.850380 | 1.762576e-60 | -8.615850e-47 |
| Msa0096940 | Msa0670660 | -0.827491 | 1.519379e-54 | -8.615850e-47 |
| Msa0096980 | Msa0670660 | 0.812226 | 4.716812e-51 | -8.615850e-47 |
| Msa0105700 | Msa0670660 | 0.852371 | 4.823280e-61 | -8.615850e-47 |
| Msa0108560 | Msa0670660 | 0.807059 | 6.082646e-50 | -8.615850e-47 |
| Msa0120340 | Msa0670660 | 0.843679 | 1.208409e-58 | -8.615850e-47 |
| Msa0608710 | Msa0670660 | 0.832220 | 1.070275e-55 | -8.615850e-47 |
| Msa0610590 | Msa0670660 | 0.833550 | 5.000145e-56 | -8.615850e-47 |
| Msa0615340 | Msa0670660 | 0.806456 | 8.154354e-50 | -8.615850e-47 |
| Msa0617830 | Msa0670660 | 0.818302 | 2.104295e-52 | -8.615850e-47 |
| Msa0621750 | Msa0670660 | -0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0622340 | Msa0670660 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0628740 | Msa0670660 | 0.818715 | 1.695818e-52 | -8.615850e-47 |
| Msa0631980 | Msa0670660 | 0.863656 | 2.130069e-64 | -8.615850e-47 |
| Msa0631990 | Msa0670660 | 0.985293 | 4.048662e-163 | -8.615850e-47 |
| Msa0635380 | Msa0670660 | 0.854928 | 8.875563e-62 | -8.615850e-47 |
| Msa0640380 | Msa0670660 | 0.822818 | 1.932127e-53 | -8.615850e-47 |
| Msa0647450 | Msa0670660 | -0.818010 | 2.450230e-52 | -8.615850e-47 |
| Msa0647830 | Msa0670660 | 0.821579 | 3.746588e-53 | -8.615850e-47 |
| Msa0650190 | Msa0670660 | 0.808071 | 3.707615e-50 | -8.615850e-47 |
| Msa0651190 | Msa0670660 | 0.830005 | 3.746676e-55 | -8.615850e-47 |
| Msa0652810 | Msa0670660 | 0.841491 | 4.601312e-58 | -8.615850e-47 |
| Msa0653490 | Msa0670660 | 0.810170 | 1.316674e-50 | -8.615850e-47 |
| Msa0662650 | Msa0670660 | 0.839420 | 1.601207e-57 | -8.615850e-47 |
| Msa0666140 | Msa0670660 | 0.814773 | 1.298746e-51 | -8.615850e-47 |
| Msa0670660 | Msa0673470 | 0.826381 | 2.799637e-54 | -8.615850e-47 |
| Msa0670660 | Msa0678820 | 0.859969 | 2.863348e-63 | -8.615850e-47 |
| Msa0670660 | Msa0692110 | 0.878100 | 3.690872e-69 | -8.615850e-47 |
| Msa0670660 | Msa0692230 | 0.802055 | 6.726072e-49 | -8.615850e-47 |
| Msa0670660 | Msa0694250 | 0.808033 | 3.777441e-50 | -8.615850e-47 |
| Msa0670660 | Msa0704730 | 0.811447 | 6.969866e-51 | -8.615850e-47 |
| Msa0670660 | Msa0708860 | 0.836263 | 1.036725e-56 | -8.615850e-47 |
| Msa0670660 | Msa0714340 | 0.833539 | 5.032824e-56 | -8.615850e-47 |
| Msa0670660 | Msa0714380 | 0.814350 | 1.611409e-51 | -8.615850e-47 |
| Msa0670660 | Msa0720480 | 0.844097 | 9.335762e-59 | -8.615850e-47 |
| Msa0670660 | Msa0723110 | 0.817550 | 3.110861e-52 | -8.615850e-47 |
| Msa0670660 | Msa0724560 | 0.858992 | 5.625947e-63 | -8.615850e-47 |
| Msa0670660 | Msa0743260 | 0.824702 | 6.994660e-54 | -8.615850e-47 |
| Msa0670660 | Msa0747260 | 0.818072 | 2.371907e-52 | -8.615850e-47 |
| Msa0670660 | Msa0751210 | 0.812318 | 4.502690e-51 | -8.615850e-47 |
| Msa0670660 | Msa0756310 | 0.856582 | 2.918867e-62 | -8.615850e-47 |
| Msa0670660 | Msa0767080 | 0.810203 | 1.295118e-50 | -8.615850e-47 |
| Msa0670660 | Msa0785570 | 0.805780 | 1.131309e-49 | -8.615850e-47 |
| Msa0670660 | Msa0791910 | 0.834384 | 3.092379e-56 | -8.615850e-47 |
| Msa0670660 | Msa0792090 | 0.815123 | 1.086147e-51 | -8.615850e-47 |
| Msa0670660 | Msa0793240 | 0.810887 | 9.218051e-51 | -8.615850e-47 |
| Msa0670660 | Msa0794320 | 0.814327 | 1.629772e-51 | -8.615850e-47 |
| Msa0670660 | Msa0831590 | 0.817481 | 3.225261e-52 | -8.615850e-47 |
| Msa0670660 | Msa0835730 | 0.843645 | 1.233833e-58 | -8.615850e-47 |
| Msa0670660 | Msa0836210 | -0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa0670660 | Msa0843250 | 0.826384 | 2.794448e-54 | -8.615850e-47 |
| Msa0670660 | Msa0846810 | 0.852769 | 3.714201e-61 | -8.615850e-47 |
| Msa0670660 | Msa0848900 | 0.855155 | 7.626745e-62 | -8.615850e-47 |
| Msa0670660 | Msa0864470 | -0.805602 | 1.233337e-49 | -8.615850e-47 |
| Msa0670660 | Msa0869120 | 0.824884 | 6.335844e-54 | -8.615850e-47 |
| Msa0670660 | Msa0874500 | 0.829813 | 4.171500e-55 | -8.615850e-47 |
| Msa0670660 | Msa0876850 | -0.805950 | 1.041958e-49 | -8.615850e-47 |
| Msa0670660 | Msa0878880 | 0.805631 | 1.216193e-49 | -8.615850e-47 |
| Msa0670660 | Msa0882510 | 0.808193 | 3.492611e-50 | -8.615850e-47 |
| Msa0670660 | Msa0891600 | -0.802915 | 4.472184e-49 | -8.615850e-47 |
| Msa0670660 | Msa0899230 | 0.821877 | 3.195753e-53 | -8.615850e-47 |
| Msa0670660 | Msa0908170 | 0.835291 | 1.827671e-56 | -8.615850e-47 |
| Msa0670660 | Msa0910980 | -0.825005 | 5.934404e-54 | -8.615850e-47 |
| Msa0670660 | Msa0927670 | 0.833523 | 5.079016e-56 | -8.615850e-47 |
| Msa0670660 | Msa0935850 | 0.801280 | 9.698720e-49 | -8.615850e-47 |
| Msa0670660 | Msa0944550 | 0.827728 | 1.332965e-54 | -8.615850e-47 |
| Msa0670660 | Msa0947590 | 0.815102 | 1.098047e-51 | -8.615850e-47 |
| Msa0670660 | Msa0960160 | 0.820315 | 7.319206e-53 | -8.615850e-47 |
| Msa0670660 | Msa0982240 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0670660 | Msa0982270 | 0.880620 | 4.724019e-70 | -8.615850e-47 |
| Msa0670660 | Msa0992490 | -0.821313 | 4.314178e-53 | -8.615850e-47 |
| Msa0670660 | Msa0999040 | 0.824215 | 9.107630e-54 | -8.615850e-47 |
| Msa0670660 | Msa1005410 | 0.808497 | 3.008496e-50 | -8.615850e-47 |
| Msa0670660 | Msa1006850 | 0.815334 | 9.749423e-52 | -8.615850e-47 |
| Msa0670660 | Msa1012830 | 0.827876 | 1.227851e-54 | -8.615850e-47 |
| Msa0670660 | Msa1023180 | 0.820951 | 5.229716e-53 | -8.615850e-47 |
| Msa0670660 | Msa1026760 | 0.802006 | 6.885145e-49 | -8.615850e-47 |
| Msa0670660 | Msa1026790 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0670660 | Msa1039880 | 0.850742 | 1.394995e-60 | -8.615850e-47 |
| Msa0670660 | Msa1043050 | 0.828014 | 1.137792e-54 | -8.615850e-47 |
| Msa0670660 | Msa1047720 | 0.810245 | 1.268692e-50 | -8.615850e-47 |
| Msa0670660 | Msa1054410 | 0.825407 | 4.768613e-54 | -8.615850e-47 |
| Msa0670660 | Msa1072460 | -0.820425 | 6.904949e-53 | -8.615850e-47 |
| Msa0670660 | Msa1074530 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0670660 | Msa1075080 | -0.817352 | 3.447413e-52 | -8.615850e-47 |
| Msa0670660 | Msa1075220 | -0.815430 | 9.280787e-52 | -8.615850e-47 |
| Msa0670660 | Msa1087470 | 0.826551 | 2.549116e-54 | -8.615850e-47 |
| Msa0670660 | Msa1090260 | 0.809114 | 2.219916e-50 | -8.615850e-47 |
| Msa0670660 | Msa1092090 | 0.864188 | 1.455501e-64 | -8.615850e-47 |
| Msa0670660 | Msa1094430 | 0.808084 | 3.685471e-50 | -8.615850e-47 |
| Msa0670660 | Msa1095480 | 0.802622 | 5.140162e-49 | -8.615850e-47 |
| Msa0670660 | Msa1116130 | -0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0670660 | Msa1116690 | 0.840700 | 7.424569e-58 | -8.615850e-47 |
| Msa0670660 | Msa1119110 | 0.811497 | 6.797065e-51 | -8.615850e-47 |
| Msa0670660 | Msa1119210 | 0.816351 | 5.783457e-52 | -8.615850e-47 |
| Msa0670660 | Msa1143930 | -0.804798 | 1.817039e-49 | -8.615850e-47 |
| Msa0670660 | Msa1150710 | 0.815731 | 7.953475e-52 | -8.615850e-47 |
| Msa0670660 | Msa1151710 | 0.828498 | 8.696462e-55 | -8.615850e-47 |
| Msa0670660 | Msa1158670 | 0.819227 | 1.297518e-52 | -8.615850e-47 |
| Msa0670660 | Msa1162550 | -0.816760 | 4.682714e-52 | -8.615850e-47 |
| Msa0670660 | Msa1163590 | -0.818604 | 1.797243e-52 | -8.615850e-47 |
| Msa0670660 | Msa1174310 | 0.818653 | 1.751714e-52 | -8.615850e-47 |
| Msa0670660 | Msa1175330 | 0.805106 | 1.566413e-49 | -8.615850e-47 |
| Msa0670660 | Msa1199560 | 0.809051 | 2.290225e-50 | -8.615850e-47 |
| Msa0670660 | Msa1207380 | 0.826853 | 2.159651e-54 | -8.615850e-47 |
| Msa0670660 | Msa1207420 | 0.805339 | 1.400528e-49 | -8.615850e-47 |
| Msa0670660 | Msa1217430 | -0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0670660 | Msa1217810 | 0.840181 | 1.014912e-57 | -8.615850e-47 |
| Msa0670660 | Msa1218650 | 0.804545 | 2.052118e-49 | -8.615850e-47 |
| Msa0670660 | Msa1219430 | 0.835354 | 1.762344e-56 | -8.615850e-47 |
| Msa0670660 | Msa1225150 | -0.832895 | 7.279455e-56 | -8.615850e-47 |
| Msa0670660 | Msa1233500 | 0.822229 | 2.649307e-53 | -8.615850e-47 |
| Msa0670660 | Msa1233890 | 0.813235 | 2.836580e-51 | -8.615850e-47 |
| Msa0670660 | Msa1235400 | 0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0670660 | Msa1235630 | 0.824135 | 9.508011e-54 | -8.615850e-47 |
| Msa0670660 | Msa1252070 | 0.811990 | 5.309170e-51 | -8.615850e-47 |
| Msa0670660 | Msa1257600 | 0.803472 | 3.429382e-49 | -8.615850e-47 |
| Msa0670660 | Msa1258380 | -0.858854 | 6.189382e-63 | -8.615850e-47 |
| Msa0670660 | Msa1260130 | 0.813219 | 2.859743e-51 | -8.615850e-47 |
| Msa0670660 | Msa1267260 | 0.824519 | 7.726591e-54 | -8.615850e-47 |
| Msa0670660 | Msa1277280 | 0.836070 | 1.160411e-56 | -8.615850e-47 |
| Msa0670660 | Msa1279210 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0670660 | Msa1279650 | 0.851742 | 7.279110e-61 | -8.615850e-47 |
| Msa0670660 | Msa1282920 | 0.818633 | 1.770795e-52 | -8.615850e-47 |
| Msa0670660 | Msa1289010 | 0.804826 | 1.792395e-49 | -8.615850e-47 |
| Msa0670660 | Msa1292730 | 0.841080 | 5.900503e-58 | -8.615850e-47 |
| Msa0670660 | Msa1300050 | 0.816922 | 4.308469e-52 | -8.615850e-47 |
| Msa0670660 | Msa1300350 | -0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0670660 | Msa1302190 | -0.822006 | 2.983705e-53 | -8.615850e-47 |
| Msa0670660 | Msa1303160 | 0.805791 | 1.125570e-49 | -8.615850e-47 |
| Msa0670660 | Msa1307740 | 0.889811 | 1.733812e-73 | -8.615850e-47 |
| Msa0670660 | Msa1314770 | 0.817793 | 2.742418e-52 | -8.615850e-47 |
| Msa0670660 | Msa1316560 | -0.833189 | 6.153155e-56 | -8.615850e-47 |
| Msa0670660 | Msa1322190 | 0.829649 | 4.573667e-55 | -8.615850e-47 |
| Msa0670660 | Msa1328700 | 0.801000 | 1.107026e-48 | -8.615850e-47 |
| Msa0670660 | Msa1340650 | 0.805633 | 1.214862e-49 | -8.615850e-47 |
| Msa0670660 | Msa1348600 | 0.836590 | 8.557330e-57 | -8.615850e-47 |
| Msa0670660 | Msa1359650 | -0.812987 | 3.214865e-51 | -8.615850e-47 |
| Msa0670660 | Msa1362880 | 0.814872 | 1.234621e-51 | -8.615850e-47 |
| Msa0670660 | Msa1370340 | 0.871880 | 4.875516e-67 | -8.615850e-47 |
| Msa0670660 | Msa1371090 | 0.808506 | 2.995488e-50 | -8.615850e-47 |
| Msa0670660 | Msa1376160 | -0.817500 | 3.193807e-52 | -8.615850e-47 |
| Msa0670660 | Msa1380430 | 0.814526 | 1.473038e-51 | -8.615850e-47 |
| Msa0670660 | Msa1386430 | 0.842108 | 3.161982e-58 | -8.615850e-47 |
| Msa0670660 | Msa1404540 | 0.820526 | 6.546943e-53 | -8.615850e-47 |
| Msa0670660 | Msa1408790 | 0.825408 | 4.765340e-54 | -8.615850e-47 |
| Msa0670660 | Msa1412890 | 0.806734 | 7.124367e-50 | -8.615850e-47 |
| Msa0670660 | Msa1417830 | -0.808051 | 3.744420e-50 | -8.615850e-47 |
| Msa0670660 | Msa1419110 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa0670660 | Msa1425010 | 0.803256 | 3.801536e-49 | -8.615850e-47 |
| Msa0670660 | Msa1431060 | 0.817636 | 2.976118e-52 | -8.615850e-47 |
| Msa0670660 | Msa1436040 | 0.822792 | 1.959852e-53 | -8.615850e-47 |
| Msa0670660 | Msa1439230 | 0.808292 | 3.327664e-50 | -8.615850e-47 |
| Msa0670660 | Msa1440600 | 0.863437 | 2.491775e-64 | -8.615850e-47 |
| Msa0670660 | Msa1444250 | -0.861141 | 1.263564e-63 | -8.615850e-47 |
| Msa0670660 | Msa1444740 | 0.834041 | 3.768588e-56 | -8.615850e-47 |
| Msa0670660 | Msa1445400 | -0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0670660 | Msa1445420 | -0.809154 | 2.176490e-50 | -8.615850e-47 |
| Msa0670660 | Msa1447150 | 0.808058 | 3.732880e-50 | -8.615850e-47 |
| Msa0670660 | Msa1448630 | 0.823626 | 1.251945e-53 | -8.615850e-47 |
| Msa0670660 | Msa1449350 | -0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0670660 | Msa1451620 | -0.823676 | 1.218405e-53 | -8.615850e-47 |
| Msa0670660 | Msa1462060 | 0.825662 | 4.148351e-54 | -8.615850e-47 |
| Msa0670660 | Msa1465960 | 0.819995 | 8.665257e-53 | -8.615850e-47 |
| Msa0125050 | Msa0670660 | 0.809862 | 1.534018e-50 | -8.615850e-47 |
| Msa0137570 | Msa0670660 | 0.810767 | 9.787811e-51 | -8.615850e-47 |
| Msa0144970 | Msa0670660 | -0.827988 | 1.153787e-54 | -8.615850e-47 |
| Msa0145010 | Msa0670660 | 0.809927 | 1.485297e-50 | -8.615850e-47 |
| Msa0148120 | Msa0670660 | 0.810625 | 1.050190e-50 | -8.615850e-47 |
| Msa0152170 | Msa0670660 | 0.843448 | 1.392394e-58 | -8.615850e-47 |
| Msa0169820 | Msa0670660 | 0.829514 | 4.934337e-55 | -8.615850e-47 |
| Msa0177340 | Msa0670660 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0178860 | Msa0670660 | -0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0183010 | Msa0670660 | -0.800682 | 1.285172e-48 | -8.615850e-47 |
| Msa0187060 | Msa0670660 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0187220 | Msa0670660 | 0.821989 | 3.010073e-53 | -8.615850e-47 |
| Msa0233610 | Msa0670660 | 0.810180 | 1.310465e-50 | -8.615850e-47 |
| Msa0236630 | Msa0670660 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0375980 | Msa0670660 | 0.802117 | 6.533188e-49 | -8.615850e-47 |
| Msa0379640 | Msa0670660 | 0.812597 | 3.914263e-51 | -8.615850e-47 |
| Msa0380040 | Msa0670660 | 0.841077 | 5.914003e-58 | -8.615850e-47 |
| Msa0388840 | Msa0670660 | 0.839786 | 1.286697e-57 | -8.615850e-47 |
| Msa0389810 | Msa0670660 | 0.884819 | 1.384496e-71 | -8.615850e-47 |
| Msa0391690 | Msa0670660 | 0.829065 | 6.339472e-55 | -8.615850e-47 |
| Msa0394340 | Msa0670660 | 0.857423 | 1.648777e-62 | -8.615850e-47 |
| Msa0427910 | Msa0670660 | 0.803408 | 3.536936e-49 | -8.615850e-47 |
| Msa0429290 | Msa0670660 | 0.827039 | 1.949754e-54 | -8.615850e-47 |
| Msa0433530 | Msa0670660 | 0.829375 | 5.331976e-55 | -8.615850e-47 |
| Msa0437130 | Msa0670660 | -0.800115 | 1.676449e-48 | -8.615850e-47 |
| Msa0442200 | Msa0670660 | 0.859098 | 5.230122e-63 | -8.615850e-47 |
| Msa0449760 | Msa0670660 | 0.866030 | 3.839304e-65 | -8.615850e-47 |
| Msa0449820 | Msa0670660 | 0.813667 | 2.279132e-51 | -8.615850e-47 |
| Msa0449830 | Msa0670660 | 0.842237 | 2.923389e-58 | -8.615850e-47 |
| Msa0464900 | Msa0670660 | 0.807270 | 5.485699e-50 | -8.615850e-47 |
| Msa0468130 | Msa0670660 | 0.883460 | 4.403129e-71 | -8.615850e-47 |
| Msa0472960 | Msa0670660 | -0.807274 | 5.475595e-50 | -8.615850e-47 |
| Msa0473240 | Msa0670660 | 0.809796 | 1.585022e-50 | -8.615850e-47 |
| Msa0475580 | Msa0670660 | 0.829265 | 5.668761e-55 | -8.615850e-47 |
| Msa0477130 | Msa0670660 | -0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0477260 | Msa0670660 | 0.837631 | 4.638654e-57 | -8.615850e-47 |
| Msa0482190 | Msa0670660 | -0.859477 | 4.024998e-63 | -8.615850e-47 |
| Msa0250670 | Msa0670660 | 0.812615 | 3.877199e-51 | -8.615850e-47 |
| Msa0260810 | Msa0670660 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa0269450 | Msa0670660 | 0.841965 | 3.450851e-58 | -8.615850e-47 |
| Msa0282250 | Msa0670660 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0307470 | Msa0670660 | 0.815368 | 9.583758e-52 | -8.615850e-47 |
| Msa0309550 | Msa0670660 | 0.818190 | 2.230137e-52 | -8.615850e-47 |
| Msa0315290 | Msa0670660 | 0.810833 | 9.467667e-51 | -8.615850e-47 |
| Msa0326670 | Msa0670660 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0344830 | Msa0670660 | 0.800506 | 1.395677e-48 | -8.615850e-47 |
| Msa0346430 | Msa0670660 | 0.824798 | 6.639191e-54 | -8.615850e-47 |
| Msa0347610 | Msa0670660 | 0.847140 | 1.396273e-59 | -8.615850e-47 |
| Msa0356960 | Msa0670660 | 0.872641 | 2.719689e-67 | -8.615850e-47 |
| Msa0485500 | Msa0670660 | -0.856208 | 3.758315e-62 | -8.615850e-47 |
| Msa0489610 | Msa0670660 | 0.879976 | 8.022191e-70 | -8.615850e-47 |
| Msa0519220 | Msa0670660 | 0.823158 | 1.609870e-53 | -8.615850e-47 |
| Msa0534410 | Msa0670660 | 0.805007 | 1.643483e-49 | -8.615850e-47 |
| Msa0539750 | Msa0670660 | 0.845312 | 4.392305e-59 | -8.615850e-47 |
| Msa0543900 | Msa0670660 | 0.843468 | 1.375942e-58 | -8.615850e-47 |
| Msa0553220 | Msa0670660 | -0.838234 | 3.245686e-57 | -8.615850e-47 |
| Msa0553460 | Msa0670660 | 0.820334 | 7.244524e-53 | -8.615850e-47 |
| Msa0562440 | Msa0670660 | 0.804380 | 2.221119e-49 | -8.615850e-47 |
| Msa0568240 | Msa0670660 | 0.805285 | 1.437202e-49 | -8.615850e-47 |
| Msa0570330 | Msa0670660 | 0.807121 | 5.899001e-50 | -8.615850e-47 |
| Msa0577120 | Msa0670660 | 0.808968 | 2.385689e-50 | -8.615850e-47 |
| Msa0578970 | Msa0670660 | 0.830349 | 3.088232e-55 | -8.615850e-47 |
| Msa0585900 | Msa0670660 | 0.817893 | 2.604171e-52 | -8.615850e-47 |
| Msa0587690 | Msa0670660 | 0.824866 | 6.398443e-54 | -8.615850e-47 |
| Msa0591710 | Msa0670660 | 0.920405 | 1.334468e-87 | -8.615850e-47 |
| Msa0594910 | Msa0670660 | 0.815797 | 7.691495e-52 | -8.615850e-47 |
| Msa0595850 | Msa0670660 | 0.851729 | 7.340475e-61 | -8.615850e-47 |
| Msa0599580 | Msa0670660 | 0.842837 | 2.025537e-58 | -8.615850e-47 |
| Msa0599770 | Msa0670660 | 0.853930 | 1.725524e-61 | -8.615850e-47 |
| Msa0599890 | Msa0670660 | 0.800394 | 1.471439e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670660 | MtrunA17_Chr4g0009821 | 94.667 | 75 | 4 | 0 | 1 | 75 | 1 | 75 | 1.31e-45 | 140 |
| Msa0670660 | MtrunA17_Chr4g0009811 | 82.667 | 75 | 13 | 0 | 1 | 75 | 1 | 75 | 1.70e-39 | 124 |
| Msa0670660 | MtrunA17_Chr7g0238571 | 56.522 | 69 | 27 | 2 | 8 | 75 | 12 | 78 | 1.71e-13 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 35 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAAATGTTCTTAGATTT+TGG | 0.126318 | 4_4:+13254517 | Msa0670660:three_prime_UTR |
| AACCACAGAAACCGTGATTT+TGG | 0.184588 | 4_4:+13254232 | Msa0670660:CDS |
| CCATTTCAGCACCTTCAAAT+TGG | 0.222108 | 4_4:-13254274 | None:intergenic |
| TAAATCTCTGCGTTTATAAA+TGG | 0.225060 | 4_4:+13254619 | Msa0670660:three_prime_UTR |
| TGCAAAGAACAAATTTATAT+TGG | 0.266509 | 4_4:-13253416 | None:intergenic |
| GGTTTCTGTGGTTTCGGCCT+CGG | 0.316189 | 4_4:-13254222 | None:intergenic |
| AATCACGGTTTCTGTGGTTT+CGG | 0.340586 | 4_4:-13254228 | None:intergenic |
| ATACACACAATTACACATAT+TGG | 0.348552 | 4_4:-13254413 | None:intergenic |
| AGCACCTTCAAATTGGATCT+TGG | 0.377145 | 4_4:-13254267 | None:intergenic |
| GCACTTCATTTGCAGTTGCA+AGG | 0.406733 | 4_4:-13254350 | None:intergenic |
| CCAATTTGAAGGTGCTGAAA+TGG | 0.415709 | 4_4:+13254274 | Msa0670660:CDS |
| AGCTATGATCGCTTTGTGTT+TGG | 0.422847 | 4_4:+13254555 | Msa0670660:three_prime_UTR |
| GCCTCTTGAAGCAGAGATAG+TGG | 0.443076 | 4_4:+13254388 | Msa0670660:three_prime_UTR |
| AAGAACAAATTTATATTGGT+TGG | 0.448696 | 4_4:-13253412 | None:intergenic |
| AGAACATTTGAATTTGATGA+AGG | 0.454645 | 4_4:-13254507 | None:intergenic |
| CACTTCATTTGCAGTTGCAA+GGG | 0.477731 | 4_4:-13254349 | None:intergenic |
| CGGCATTTATCGACATAAGT+TGG | 0.494265 | 4_4:+13254697 | Msa0670660:three_prime_UTR |
| AGAATAATATGAAGTGGTCA+TGG | 0.503092 | 4_4:+13254478 | Msa0670660:three_prime_UTR |
| CAATTTGAAGGTGCTGAAAT+GGG | 0.519160 | 4_4:+13254275 | Msa0670660:CDS |
| CCTTCAAATTGGATCTTGGC+CGG | 0.520393 | 4_4:-13254263 | None:intergenic |
| TCCACTATCTCTGCTTCAAG+AGG | 0.522381 | 4_4:-13254389 | None:intergenic |
| AATATGTCTAGCTGTGGTTG+TGG | 0.535056 | 4_4:+13253464 | Msa0670660:exon |
| CCGGCCAAGATCCAATTTGA+AGG | 0.537483 | 4_4:+13254263 | Msa0670660:CDS |
| TACTTTGCAGATGCAGCAAG+AGG | 0.554610 | 4_4:+13254180 | Msa0670660:intron |
| GCCCAAAATCACGGTTTCTG+TGG | 0.561475 | 4_4:-13254234 | None:intergenic |
| GAGGATGGTGGCTGCAAGTG+TGG | 0.564753 | 4_4:+13254308 | Msa0670660:CDS |
| CGGACCAACGCCCAAAATCA+CGG | 0.579536 | 4_4:-13254243 | None:intergenic |
| TGAAATGGGTGTTGCAGCTG+AGG | 0.589074 | 4_4:+13254289 | Msa0670660:CDS |
| TTGATTCATCAACATCAAGT+CGG | 0.591842 | 4_4:+13254677 | Msa0670660:three_prime_UTR |
| ATGGGTGTTGCAGCTGAGGA+TGG | 0.598628 | 4_4:+13254293 | Msa0670660:CDS |
| AGATGCAGCAAGAGGTCTAG+TGG | 0.623429 | 4_4:+13254188 | Msa0670660:intron |
| GGTGTTGCAGCTGAGGATGG+TGG | 0.628303 | 4_4:+13254296 | Msa0670660:CDS |
| TGTGGAAGCAGTTGCAACTG+TGG | 0.645986 | 4_4:+13253482 | Msa0670660:CDS |
| TAGTGGATTGAGCTATGCCG+AGG | 0.657350 | 4_4:+13254205 | Msa0670660:CDS |
| TCTGAAAATATGTCTAGCTG+TGG | 0.682059 | 4_4:+13253458 | Msa0670660:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATATTTCTTTTATGA+GGG | + | chr4_4:13253817-13253836 | Msa0670660:intron | 10.0% |
| !!! | TATTTATATTTCTTTTATGA+GGG | + | chr4_4:13253817-13253836 | Msa0670660:intron | 10.0% |
| !!! | AATAGTCATATAATTTTGTT+TGG | - | chr4_4:13253554-13253573 | None:intergenic | 15.0% |
| !!! | TTTTAATTTATGATGATTCT+TGG | + | chr4_4:13253591-13253610 | Msa0670660:intron | 15.0% |
| !! | GATCATTAAATTAATATACT+TGG | + | chr4_4:13253746-13253765 | Msa0670660:intron | 15.0% |
| !!! | GTATTTATATTTCTTTTATG+AGG | + | chr4_4:13253816-13253835 | Msa0670660:intron | 15.0% |
| !!! | ACTTCATATTATTCTAAAAA+AGG | - | chr4_4:13254473-13254492 | None:intergenic | 15.0% |
| !!! | TTTTTTAGAATAATATGAAG+TGG | + | chr4_4:13254472-13254491 | Msa0670660:three_prime_UTR | 15.0% |
| !!! | AATAGTCATATAATTTTGTT+TGG | - | chr4_4:13253554-13253573 | None:intergenic | 15.0% |
| !!! | TTTTAATTTATGATGATTCT+TGG | + | chr4_4:13253591-13253610 | Msa0670660:intron | 15.0% |
| !! | GATCATTAAATTAATATACT+TGG | + | chr4_4:13253746-13253765 | Msa0670660:intron | 15.0% |
| !!! | GTATTTATATTTCTTTTATG+AGG | + | chr4_4:13253816-13253835 | Msa0670660:intron | 15.0% |
| !!! | ACTTCATATTATTCTAAAAA+AGG | - | chr4_4:13254473-13254492 | None:intergenic | 15.0% |
| !!! | TTTTTTAGAATAATATGAAG+TGG | + | chr4_4:13254472-13254491 | Msa0670660:three_prime_UTR | 15.0% |
| !! | AAGAACAAATTTATATTGGT+TGG | - | chr4_4:13253415-13253434 | None:intergenic | 20.0% |
| !! | TGCAAAGAACAAATTTATAT+TGG | - | chr4_4:13253419-13253438 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTCTATCTTCAT+AGG | + | chr4_4:13253670-13253689 | Msa0670660:intron | 20.0% |
| !!! | AAATTTGATTTGTGTTTAGA+AGG | + | chr4_4:13253791-13253810 | Msa0670660:intron | 20.0% |
| !!! | AATTTGATTTGTGTTTAGAA+GGG | + | chr4_4:13253792-13253811 | Msa0670660:intron | 20.0% |
| !! | AGTGTACAATAATAATTCAT+CGG | + | chr4_4:13254087-13254106 | Msa0670660:intron | 20.0% |
| !!! | ATTCAAATGTTCTTAGATTT+TGG | + | chr4_4:13254517-13254536 | Msa0670660:three_prime_UTR | 20.0% |
| !! | AAGAACAAATTTATATTGGT+TGG | - | chr4_4:13253415-13253434 | None:intergenic | 20.0% |
| !! | TGCAAAGAACAAATTTATAT+TGG | - | chr4_4:13253419-13253438 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTCTATCTTCAT+AGG | + | chr4_4:13253670-13253689 | Msa0670660:intron | 20.0% |
| !!! | AAATTTGATTTGTGTTTAGA+AGG | + | chr4_4:13253791-13253810 | Msa0670660:intron | 20.0% |
| !!! | AATTTGATTTGTGTTTAGAA+GGG | + | chr4_4:13253792-13253811 | Msa0670660:intron | 20.0% |
| !! | AGTGTACAATAATAATTCAT+CGG | + | chr4_4:13254087-13254106 | Msa0670660:intron | 20.0% |
| !!! | ATTCAAATGTTCTTAGATTT+TGG | + | chr4_4:13254517-13254536 | Msa0670660:three_prime_UTR | 20.0% |
| !!! | TGTTTTTTCCATGATTCTTT+TGG | + | chr4_4:13253624-13253643 | Msa0670660:intron | 25.0% |
| !!! | ATTTGATTTGTGTTTAGAAG+GGG | + | chr4_4:13253793-13253812 | Msa0670660:intron | 25.0% |
| !! | TAATTCATCGGTATCAATTT+TGG | + | chr4_4:13254099-13254118 | Msa0670660:intron | 25.0% |
| ! | ATACACACAATTACACATAT+TGG | - | chr4_4:13254416-13254435 | None:intergenic | 25.0% |
| ! | AGAACATTTGAATTTGATGA+AGG | - | chr4_4:13254510-13254529 | None:intergenic | 25.0% |
| ! | TAAATCTCTGCGTTTATAAA+TGG | + | chr4_4:13254619-13254638 | Msa0670660:three_prime_UTR | 25.0% |
| !!! | TGTTTTTTCCATGATTCTTT+TGG | + | chr4_4:13253624-13253643 | Msa0670660:intron | 25.0% |
| !!! | ATTTGATTTGTGTTTAGAAG+GGG | + | chr4_4:13253793-13253812 | Msa0670660:intron | 25.0% |
| !! | TAATTCATCGGTATCAATTT+TGG | + | chr4_4:13254099-13254118 | Msa0670660:intron | 25.0% |
| ! | ATACACACAATTACACATAT+TGG | - | chr4_4:13254416-13254435 | None:intergenic | 25.0% |
| ! | AGAACATTTGAATTTGATGA+AGG | - | chr4_4:13254510-13254529 | None:intergenic | 25.0% |
| ! | TAAATCTCTGCGTTTATAAA+TGG | + | chr4_4:13254619-13254638 | Msa0670660:three_prime_UTR | 25.0% |
| AAAGCAACAAAAAGTTAAGG+TGG | - | chr4_4:13253531-13253550 | None:intergenic | 30.0% | |
| TGGAAAGCAACAAAAAGTTA+AGG | - | chr4_4:13253534-13253553 | None:intergenic | 30.0% | |
| ! | TTTTCCATGATTCTTTTGGT+TGG | + | chr4_4:13253628-13253647 | Msa0670660:intron | 30.0% |
| !! | TTTCCATGATTCTTTTGGTT+GGG | + | chr4_4:13253629-13253648 | Msa0670660:intron | 30.0% |
| !! | TTTGATTTGTGTTTAGAAGG+GGG | + | chr4_4:13253794-13253813 | Msa0670660:intron | 30.0% |
| TGTCAATGCAATTAAGTAAG+AGG | + | chr4_4:13253926-13253945 | Msa0670660:intron | 30.0% | |
| AGAATAATATGAAGTGGTCA+TGG | + | chr4_4:13254478-13254497 | Msa0670660:three_prime_UTR | 30.0% | |
| !! | ATGTTCTTAGATTTTGGTGA+AGG | + | chr4_4:13254523-13254542 | Msa0670660:three_prime_UTR | 30.0% |
| TTGATTCATCAACATCAAGT+CGG | + | chr4_4:13254677-13254696 | Msa0670660:three_prime_UTR | 30.0% | |
| AAAGCAACAAAAAGTTAAGG+TGG | - | chr4_4:13253531-13253550 | None:intergenic | 30.0% | |
| TGGAAAGCAACAAAAAGTTA+AGG | - | chr4_4:13253534-13253553 | None:intergenic | 30.0% | |
| ! | TTTTCCATGATTCTTTTGGT+TGG | + | chr4_4:13253628-13253647 | Msa0670660:intron | 30.0% |
| !! | TTTCCATGATTCTTTTGGTT+GGG | + | chr4_4:13253629-13253648 | Msa0670660:intron | 30.0% |
| !! | TTTGATTTGTGTTTAGAAGG+GGG | + | chr4_4:13253794-13253813 | Msa0670660:intron | 30.0% |
| TGTCAATGCAATTAAGTAAG+AGG | + | chr4_4:13253926-13253945 | Msa0670660:intron | 30.0% | |
| AGAATAATATGAAGTGGTCA+TGG | + | chr4_4:13254478-13254497 | Msa0670660:three_prime_UTR | 30.0% | |
| !! | ATGTTCTTAGATTTTGGTGA+AGG | + | chr4_4:13254523-13254542 | Msa0670660:three_prime_UTR | 30.0% |
| TTGATTCATCAACATCAAGT+CGG | + | chr4_4:13254677-13254696 | Msa0670660:three_prime_UTR | 30.0% | |
| TCTGAAAATATGTCTAGCTG+TGG | + | chr4_4:13253458-13253477 | Msa0670660:exon | 35.0% | |
| ATAAGATATGCACAACGACT+TGG | + | chr4_4:13254001-13254020 | Msa0670660:intron | 35.0% | |
| !! | AACTCTTTACCATTGACTTG+AGG | - | chr4_4:13254035-13254054 | None:intergenic | 35.0% |
| !! | CAATTTGAAGGTGCTGAAAT+GGG | + | chr4_4:13254275-13254294 | Msa0670660:CDS | 35.0% |
| TCTGAAAATATGTCTAGCTG+TGG | + | chr4_4:13253458-13253477 | Msa0670660:exon | 35.0% | |
| ATAAGATATGCACAACGACT+TGG | + | chr4_4:13254001-13254020 | Msa0670660:intron | 35.0% | |
| !! | AACTCTTTACCATTGACTTG+AGG | - | chr4_4:13254035-13254054 | None:intergenic | 35.0% |
| !! | CAATTTGAAGGTGCTGAAAT+GGG | + | chr4_4:13254275-13254294 | Msa0670660:CDS | 35.0% |
| AATATGTCTAGCTGTGGTTG+TGG | + | chr4_4:13253464-13253483 | Msa0670660:exon | 40.0% | |
| GAACCCAACCAAAAGAATCA+TGG | - | chr4_4:13253635-13253654 | None:intergenic | 40.0% | |
| AATCACGGTTTCTGTGGTTT+CGG | - | chr4_4:13254231-13254250 | None:intergenic | 40.0% | |
| ! | AACCACAGAAACCGTGATTT+TGG | + | chr4_4:13254232-13254251 | Msa0670660:CDS | 40.0% |
| ! | ACCACAGAAACCGTGATTTT+GGG | + | chr4_4:13254233-13254252 | Msa0670660:CDS | 40.0% |
| AGCACCTTCAAATTGGATCT+TGG | - | chr4_4:13254270-13254289 | None:intergenic | 40.0% | |
| CCATTTCAGCACCTTCAAAT+TGG | - | chr4_4:13254277-13254296 | None:intergenic | 40.0% | |
| !! | CCAATTTGAAGGTGCTGAAA+TGG | + | chr4_4:13254274-13254293 | Msa0670660:CDS | 40.0% |
| CACTTCATTTGCAGTTGCAA+GGG | - | chr4_4:13254352-13254371 | None:intergenic | 40.0% | |
| AGCTATGATCGCTTTGTGTT+TGG | + | chr4_4:13254555-13254574 | Msa0670660:three_prime_UTR | 40.0% | |
| CGGCATTTATCGACATAAGT+TGG | + | chr4_4:13254697-13254716 | Msa0670660:three_prime_UTR | 40.0% | |
| AATATGTCTAGCTGTGGTTG+TGG | + | chr4_4:13253464-13253483 | Msa0670660:exon | 40.0% | |
| GAACCCAACCAAAAGAATCA+TGG | - | chr4_4:13253635-13253654 | None:intergenic | 40.0% | |
| AATCACGGTTTCTGTGGTTT+CGG | - | chr4_4:13254231-13254250 | None:intergenic | 40.0% | |
| ! | AACCACAGAAACCGTGATTT+TGG | + | chr4_4:13254232-13254251 | Msa0670660:CDS | 40.0% |
| ! | ACCACAGAAACCGTGATTTT+GGG | + | chr4_4:13254233-13254252 | Msa0670660:CDS | 40.0% |
| AGCACCTTCAAATTGGATCT+TGG | - | chr4_4:13254270-13254289 | None:intergenic | 40.0% | |
| CCATTTCAGCACCTTCAAAT+TGG | - | chr4_4:13254277-13254296 | None:intergenic | 40.0% | |
| !! | CCAATTTGAAGGTGCTGAAA+TGG | + | chr4_4:13254274-13254293 | Msa0670660:CDS | 40.0% |
| CACTTCATTTGCAGTTGCAA+GGG | - | chr4_4:13254352-13254371 | None:intergenic | 40.0% | |
| AGCTATGATCGCTTTGTGTT+TGG | + | chr4_4:13254555-13254574 | Msa0670660:three_prime_UTR | 40.0% | |
| CGGCATTTATCGACATAAGT+TGG | + | chr4_4:13254697-13254716 | Msa0670660:three_prime_UTR | 40.0% | |
| TGTGGTGATAGCTGCAAGTA+AGG | + | chr4_4:13253500-13253519 | Msa0670660:intron | 45.0% | |
| ! | AGATATGCACAACGACTTGG+TGG | + | chr4_4:13254004-13254023 | Msa0670660:intron | 45.0% |
| !! | GATATGCACAACGACTTGGT+GGG | + | chr4_4:13254005-13254024 | Msa0670660:intron | 45.0% |
| TACTTTGCAGATGCAGCAAG+AGG | + | chr4_4:13254180-13254199 | Msa0670660:intron | 45.0% | |
| CCTTCAAATTGGATCTTGGC+CGG | - | chr4_4:13254266-13254285 | None:intergenic | 45.0% | |
| GCACTTCATTTGCAGTTGCA+AGG | - | chr4_4:13254353-13254372 | None:intergenic | 45.0% | |
| TCCACTATCTCTGCTTCAAG+AGG | - | chr4_4:13254392-13254411 | None:intergenic | 45.0% | |
| TGTGGTGATAGCTGCAAGTA+AGG | + | chr4_4:13253500-13253519 | Msa0670660:intron | 45.0% | |
| ! | AGATATGCACAACGACTTGG+TGG | + | chr4_4:13254004-13254023 | Msa0670660:intron | 45.0% |
| !! | GATATGCACAACGACTTGGT+GGG | + | chr4_4:13254005-13254024 | Msa0670660:intron | 45.0% |
| TACTTTGCAGATGCAGCAAG+AGG | + | chr4_4:13254180-13254199 | Msa0670660:intron | 45.0% | |
| CCTTCAAATTGGATCTTGGC+CGG | - | chr4_4:13254266-13254285 | None:intergenic | 45.0% | |
| GCACTTCATTTGCAGTTGCA+AGG | - | chr4_4:13254353-13254372 | None:intergenic | 45.0% | |
| TCCACTATCTCTGCTTCAAG+AGG | - | chr4_4:13254392-13254411 | None:intergenic | 45.0% | |
| TGTGGAAGCAGTTGCAACTG+TGG | + | chr4_4:13253482-13253501 | Msa0670660:CDS | 50.0% | |
| GTGGGTACTCCTCAAGTCAA+TGG | + | chr4_4:13254023-13254042 | Msa0670660:intron | 50.0% | |
| AGATGCAGCAAGAGGTCTAG+TGG | + | chr4_4:13254188-13254207 | Msa0670660:intron | 50.0% | |
| !! | TAGTGGATTGAGCTATGCCG+AGG | + | chr4_4:13254205-13254224 | Msa0670660:CDS | 50.0% |
| GCCCAAAATCACGGTTTCTG+TGG | - | chr4_4:13254237-13254256 | None:intergenic | 50.0% | |
| ! | GAAACCGTGATTTTGGGCGT+TGG | + | chr4_4:13254239-13254258 | Msa0670660:CDS | 50.0% |
| CCGGCCAAGATCCAATTTGA+AGG | + | chr4_4:13254263-13254282 | Msa0670660:CDS | 50.0% | |
| ! | TGAAATGGGTGTTGCAGCTG+AGG | + | chr4_4:13254289-13254308 | Msa0670660:CDS | 50.0% |
| GCCTCTTGAAGCAGAGATAG+TGG | + | chr4_4:13254388-13254407 | Msa0670660:three_prime_UTR | 50.0% | |
| TGTGGAAGCAGTTGCAACTG+TGG | + | chr4_4:13253482-13253501 | Msa0670660:CDS | 50.0% | |
| GTGGGTACTCCTCAAGTCAA+TGG | + | chr4_4:13254023-13254042 | Msa0670660:intron | 50.0% | |
| AGATGCAGCAAGAGGTCTAG+TGG | + | chr4_4:13254188-13254207 | Msa0670660:intron | 50.0% | |
| !! | TAGTGGATTGAGCTATGCCG+AGG | + | chr4_4:13254205-13254224 | Msa0670660:CDS | 50.0% |
| GCCCAAAATCACGGTTTCTG+TGG | - | chr4_4:13254237-13254256 | None:intergenic | 50.0% | |
| ! | GAAACCGTGATTTTGGGCGT+TGG | + | chr4_4:13254239-13254258 | Msa0670660:CDS | 50.0% |
| CCGGCCAAGATCCAATTTGA+AGG | + | chr4_4:13254263-13254282 | Msa0670660:CDS | 50.0% | |
| ! | TGAAATGGGTGTTGCAGCTG+AGG | + | chr4_4:13254289-13254308 | Msa0670660:CDS | 50.0% |
| GCCTCTTGAAGCAGAGATAG+TGG | + | chr4_4:13254388-13254407 | Msa0670660:three_prime_UTR | 50.0% | |
| GGTTTCTGTGGTTTCGGCCT+CGG | - | chr4_4:13254225-13254244 | None:intergenic | 55.0% | |
| CGGACCAACGCCCAAAATCA+CGG | - | chr4_4:13254246-13254265 | None:intergenic | 55.0% | |
| !!! | CGTGATTTTGGGCGTTGGTC+CGG | + | chr4_4:13254244-13254263 | Msa0670660:CDS | 55.0% |
| ! | ATGGGTGTTGCAGCTGAGGA+TGG | + | chr4_4:13254293-13254312 | Msa0670660:CDS | 55.0% |
| GGTTTCTGTGGTTTCGGCCT+CGG | - | chr4_4:13254225-13254244 | None:intergenic | 55.0% | |
| CGGACCAACGCCCAAAATCA+CGG | - | chr4_4:13254246-13254265 | None:intergenic | 55.0% | |
| !!! | CGTGATTTTGGGCGTTGGTC+CGG | + | chr4_4:13254244-13254263 | Msa0670660:CDS | 55.0% |
| ! | ATGGGTGTTGCAGCTGAGGA+TGG | + | chr4_4:13254293-13254312 | Msa0670660:CDS | 55.0% |
| ! | GGTGTTGCAGCTGAGGATGG+TGG | + | chr4_4:13254296-13254315 | Msa0670660:CDS | 60.0% |
| ! | GAGGATGGTGGCTGCAAGTG+TGG | + | chr4_4:13254308-13254327 | Msa0670660:CDS | 60.0% |
| ! | GGTGTTGCAGCTGAGGATGG+TGG | + | chr4_4:13254296-13254315 | Msa0670660:CDS | 60.0% |
| ! | GAGGATGGTGGCTGCAAGTG+TGG | + | chr4_4:13254308-13254327 | Msa0670660:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 13253382 | 13254721 | 13253382 | ID=Msa0670660;Name=Msa0670660 |
| chr4_4 | mRNA | 13253382 | 13254721 | 13253382 | ID=Msa0670660-mRNA-1;Parent=Msa0670660;Name=Msa0670660-mRNA-1;_AED=0.23;_eAED=0.23;_QI=85|1|1|1|1|1|2|354|75 |
| chr4_4 | exon | 13253382 | 13253516 | 13253382 | ID=Msa0670660-mRNA-1:exon:4034;Parent=Msa0670660-mRNA-1 |
| chr4_4 | exon | 13254190 | 13254721 | 13254190 | ID=Msa0670660-mRNA-1:exon:4035;Parent=Msa0670660-mRNA-1 |
| chr4_4 | five_prime_UTR | 13253382 | 13253466 | 13253382 | ID=Msa0670660-mRNA-1:five_prime_utr;Parent=Msa0670660-mRNA-1 |
| chr4_4 | CDS | 13253467 | 13253516 | 13253467 | ID=Msa0670660-mRNA-1:cds;Parent=Msa0670660-mRNA-1 |
| chr4_4 | CDS | 13254190 | 13254367 | 13254190 | ID=Msa0670660-mRNA-1:cds;Parent=Msa0670660-mRNA-1 |
| chr4_4 | three_prime_UTR | 13254368 | 13254721 | 13254368 | ID=Msa0670660-mRNA-1:three_prime_utr;Parent=Msa0670660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
