Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0554180 | XP_003607452.1 | 96.721 | 305 | 10 | 0 | 21 | 325 | 89 | 393 | 0.0 | 602 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0554180 | sp|Q9FWS3|C3H16_ARATH | 36.639 | 363 | 166 | 10 | 26 | 324 | 73 | 435 | 1.37e-50 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0554180 | G7JSU2 | 96.721 | 305 | 10 | 0 | 21 | 325 | 89 | 393 | 0.0 | 602 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa0554180 | 0.824189 | 9.238033e-54 | -8.615850e-47 |
Msa0005000 | Msa0554180 | 0.827038 | 1.951107e-54 | -8.615850e-47 |
Msa0053050 | Msa0554180 | 0.811338 | 7.358399e-51 | -8.615850e-47 |
Msa0098390 | Msa0554180 | 0.828953 | 6.748537e-55 | -8.615850e-47 |
Msa0120540 | Msa0554180 | -0.800205 | 1.607692e-48 | -8.615850e-47 |
Msa0140520 | Msa0554180 | 0.827671 | 1.375415e-54 | -8.615850e-47 |
Msa0182280 | Msa0554180 | -0.805389 | 1.366849e-49 | -8.615850e-47 |
Msa0212750 | Msa0554180 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
Msa0227310 | Msa0554180 | 0.825436 | 4.693239e-54 | -8.615850e-47 |
Msa0236980 | Msa0554180 | -0.802826 | 4.665935e-49 | -8.615850e-47 |
Msa0370160 | Msa0554180 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
Msa0403190 | Msa0554180 | -0.800826 | 1.201323e-48 | -8.615850e-47 |
Msa0419640 | Msa0554180 | 0.831880 | 1.298781e-55 | -8.615850e-47 |
Msa0436200 | Msa0554180 | -0.814322 | 1.634291e-51 | -8.615850e-47 |
Msa0437690 | Msa0554180 | 0.811404 | 7.121392e-51 | -8.615850e-47 |
Msa0469910 | Msa0554180 | 0.827934 | 1.188933e-54 | -8.615850e-47 |
Msa0328210 | Msa0554180 | -0.806240 | 9.053851e-50 | -8.615850e-47 |
Msa0509950 | Msa0554180 | 0.809687 | 1.672734e-50 | -8.615850e-47 |
Msa0524590 | Msa0554180 | -0.806298 | 8.804035e-50 | -8.615850e-47 |
Msa0554180 | Msa0577200 | 0.808837 | 2.545054e-50 | -8.615850e-47 |
Msa0554180 | Msa0607290 | 0.831391 | 1.713864e-55 | -8.615850e-47 |
Msa0554180 | Msa0609970 | -0.837053 | 6.522394e-57 | -8.615850e-47 |
Msa0554180 | Msa0615660 | -0.802244 | 6.151102e-49 | -8.615850e-47 |
Msa0554180 | Msa0618200 | 0.801716 | 7.895948e-49 | -8.615850e-47 |
Msa0554180 | Msa0648640 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
Msa0554180 | Msa0650620 | -0.820442 | 6.845484e-53 | -8.615850e-47 |
Msa0554180 | Msa0712310 | -0.811077 | 8.383038e-51 | -8.615850e-47 |
Msa0554180 | Msa0747720 | 0.815886 | 7.345367e-52 | -8.615850e-47 |
Msa0554180 | Msa0750330 | 0.801950 | 7.068083e-49 | -8.615850e-47 |
Msa0554180 | Msa0752620 | -0.810179 | 1.310955e-50 | -8.615850e-47 |
Msa0554180 | Msa0798810 | 0.840044 | 1.102040e-57 | -8.615850e-47 |
Msa0554180 | Msa0814630 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
Msa0554180 | Msa0830990 | -0.815917 | 7.229735e-52 | -8.615850e-47 |
Msa0554180 | Msa0836210 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
Msa0554180 | Msa0855160 | 0.804347 | 2.256420e-49 | -8.615850e-47 |
Msa0554180 | Msa0879850 | -0.800331 | 1.515553e-48 | -8.615850e-47 |
Msa0554180 | Msa0947530 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
Msa0554180 | Msa1002600 | 0.807330 | 5.329498e-50 | -8.615850e-47 |
Msa0554180 | Msa1069660 | 0.817366 | 3.422746e-52 | -8.615850e-47 |
Msa0554180 | Msa1098720 | 0.815112 | 1.092460e-51 | -8.615850e-47 |
Msa0554180 | Msa1126120 | 0.843647 | 1.231920e-58 | -8.615850e-47 |
Msa0554180 | Msa1171770 | 0.808583 | 2.884466e-50 | -8.615850e-47 |
Msa0554180 | Msa1173900 | -0.808394 | 3.164236e-50 | -8.615850e-47 |
Msa0554180 | Msa1211050 | 0.801753 | 7.760839e-49 | -8.615850e-47 |
Msa0554180 | Msa1236070 | 0.840240 | 9.793089e-58 | -8.615850e-47 |
Msa0554180 | Msa1310660 | -0.801035 | 1.088806e-48 | -8.615850e-47 |
Msa0554180 | Msa1398860 | -0.830161 | 3.431979e-55 | -8.615850e-47 |
Msa0554180 | Msa1425340 | -0.802583 | 5.237857e-49 | -8.615850e-47 |
Msa0554180 | Msa1438450 | -0.801530 | 8.619924e-49 | -8.615850e-47 |
Msa0554180 | Msa1442220 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0554180 | MtrunA17_Chr4g0040061 | 96.721 | 305 | 10 | 0 | 21 | 325 | 89 | 393 | 0.0 | 602 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0554180 | AT1G75340.3 | 39.692 | 325 | 151 | 9 | 26 | 324 | 73 | 378 | 1.60e-59 | 196 |
Msa0554180 | AT1G75340.2 | 39.692 | 325 | 151 | 9 | 26 | 324 | 93 | 398 | 2.79e-59 | 195 |
Msa0554180 | AT1G75340.1 | 36.639 | 363 | 166 | 10 | 26 | 324 | 73 | 435 | 1.39e-51 | 176 |
Find 118 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGACGTGGAGTGCCGTTC+TGG | 0.197426 | 4_1:+51428935 | None:intergenic |
TTGTCATGTTACAATGAAAA+AGG | 0.214628 | 4_1:+51423881 | None:intergenic |
TAGCTCCACTACAATGTTTC+AGG | 0.285865 | 4_1:-51425310 | Msa0554180:CDS |
CAACGGGTGGTTGTTGGAAC+TGG | 0.317831 | 4_1:+51425346 | None:intergenic |
CTGACGTGGAGTGCCGTTCT+GGG | 0.320651 | 4_1:+51428936 | None:intergenic |
GGATGATAGTATCTGGTTAA+AGG | 0.329999 | 4_1:-51424566 | Msa0554180:CDS |
CTATCTGGAGGAGCTTGTTC+TGG | 0.339340 | 4_1:+51424193 | None:intergenic |
GGCATTTGCATTGGCTCCAT+TGG | 0.343025 | 4_1:+51426890 | None:intergenic |
TGGAGTGCCGTTCTGGGGCT+TGG | 0.345747 | 4_1:+51428942 | None:intergenic |
TGCACTGGAGTACTCATTAA+TGG | 0.355560 | 4_1:+51425596 | None:intergenic |
GTCTACCAAACAAATCTATC+TGG | 0.360641 | 4_1:+51424178 | None:intergenic |
AGTCTCAAGCTTTAGCCAAC+TGG | 0.360859 | 4_1:-51426832 | Msa0554180:CDS |
GGCATTTACATTGGTTCCAT+TGG | 0.361596 | 4_1:+51426941 | None:intergenic |
CAGTATCAATCAAGGACTTT+GGG | 0.374042 | 4_1:+51424020 | None:intergenic |
AACAGGTTTCTTACAATTTG+TGG | 0.374910 | 4_1:+51427345 | None:intergenic |
CCTACACCAGCGGGGTTGAC+AGG | 0.380081 | 4_1:-51425387 | Msa0554180:CDS |
TTTGGTAGACATCTGTGTAT+AGG | 0.382359 | 4_1:-51424165 | Msa0554180:exon |
GCGGGGTTGACAGGGTTTCC+AGG | 0.404696 | 4_1:-51425378 | Msa0554180:CDS |
CATGCTATGGTCACTGTAAA+GGG | 0.409378 | 4_1:-51428183 | Msa0554180:intron |
TCAGTATCAATCAAGGACTT+TGG | 0.409504 | 4_1:+51424019 | None:intergenic |
CTAAAGCTTGAGACTGATAA+AGG | 0.416164 | 4_1:+51426840 | None:intergenic |
GTATCTGGTTAAAGGAGAAA+TGG | 0.421007 | 4_1:-51424558 | Msa0554180:CDS |
ATATTAGCTATGAAGAATTA+CGG | 0.425378 | 4_1:-51427407 | Msa0554180:CDS |
GCTGAAAATCTTCTACAATC+TGG | 0.429867 | 4_1:+51428230 | None:intergenic |
GTCAACACTTCCTGCGAGGC+AGG | 0.433503 | 4_1:-51430509 | Msa0554180:intron |
ACATGCTATGGTCACTGTAA+AGG | 0.440855 | 4_1:-51428184 | Msa0554180:CDS |
CCGAATAGATTTCCTGAGTT+GGG | 0.442288 | 4_1:+51425444 | None:intergenic |
CTCCTCCAGATAGATTTGTT+TGG | 0.444104 | 4_1:-51424183 | Msa0554180:CDS |
ATCTGGTGCTTGCAAGCCTC+AGG | 0.444194 | 4_1:+51428247 | None:intergenic |
TGAACCCAACGGGTGGTTGT+TGG | 0.446347 | 4_1:+51425340 | None:intergenic |
CTATTCGGCAGTGGAATCTC+AGG | 0.451076 | 4_1:-51425429 | Msa0554180:CDS |
TTACATTGGTTCCATTGGAT+TGG | 0.451087 | 4_1:+51426946 | None:intergenic |
AATTACAGAGTTATATCAAC+TGG | 0.452469 | 4_1:-51424096 | Msa0554180:three_prime_UTR |
CAACCAGCCACTCAAAATAA+TGG | 0.452627 | 4_1:-51426864 | Msa0554180:CDS |
CTTTGGATTCTTACATGCTA+TGG | 0.454295 | 4_1:-51428196 | Msa0554180:CDS |
GTGACTTACAACTGAACATC+TGG | 0.457439 | 4_1:+51425282 | None:intergenic |
CATTGTTACCTTTCAAAGCC+AGG | 0.459429 | 4_1:+51426795 | None:intergenic |
CCCAACTCAGGAAATCTATT+CGG | 0.463482 | 4_1:-51425444 | Msa0554180:CDS |
AGCCCCTTGAAAACAACAAA+TGG | 0.465513 | 4_1:-51428978 | Msa0554180:CDS |
TATTAGCTATGAAGAATTAC+GGG | 0.470165 | 4_1:-51427406 | Msa0554180:CDS |
TTGCATTGGCTCCATTGGAT+TGG | 0.473295 | 4_1:+51426895 | None:intergenic |
ATTACGGGCAGCGGCTTATG+AGG | 0.476038 | 4_1:-51427391 | Msa0554180:CDS |
AGTTCCAACAACCACCCGTT+GGG | 0.480716 | 4_1:-51425344 | Msa0554180:CDS |
AACCCCTTTCCTACACCAGC+GGG | 0.481599 | 4_1:-51425396 | Msa0554180:CDS |
AACCCCGCTGGTGTAGGAAA+GGG | 0.485644 | 4_1:+51425393 | None:intergenic |
AGTGCTCCTTGTGACATTGT+TGG | 0.492049 | 4_1:-51427432 | Msa0554180:CDS |
CCACAGACACATTCTCCACT+TGG | 0.493241 | 4_1:+51424587 | None:intergenic |
GTCTCAAGCTTTAGCCAACT+GGG | 0.494261 | 4_1:-51426831 | Msa0554180:CDS |
CTCTGTAATTCAACCAAGAA+AGG | 0.494457 | 4_1:+51424109 | None:intergenic |
CCAATGGAACTAGGCTGCAC+TGG | 0.496298 | 4_1:+51425581 | None:intergenic |
AAACTGATTTCGTGCAAGCT+AGG | 0.507656 | 4_1:+51423906 | None:intergenic |
CCTCCACCTCCAATGGAACT+AGG | 0.507796 | 4_1:+51425572 | None:intergenic |
CCAGTGCAGCCTAGTTCCAT+TGG | 0.509632 | 4_1:-51425581 | Msa0554180:CDS |
CACTGAACCCTGGCTTTGAA+AGG | 0.511359 | 4_1:-51426803 | Msa0554180:intron |
TTTGTTAAACTCAACCAACT+TGG | 0.511788 | 4_1:+51427025 | None:intergenic |
GAGTTATATCAACTGGTGGA+TGG | 0.513907 | 4_1:-51424089 | Msa0554180:three_prime_UTR |
GCCGAATAGATTTCCTGAGT+TGG | 0.514471 | 4_1:+51425443 | None:intergenic |
AGAGGAATGACCTGCCTCGC+AGG | 0.516229 | 4_1:+51430499 | None:intergenic |
ATACATACCTCCACCTCCAA+TGG | 0.518617 | 4_1:+51425565 | None:intergenic |
AGTTATATCAACTGGTGGAT+GGG | 0.522414 | 4_1:-51424088 | Msa0554180:three_prime_UTR |
TGGTTGAAAGGCATTTGCAT+TGG | 0.523106 | 4_1:+51426881 | None:intergenic |
CTATGAAGAATTACGGGCAG+CGG | 0.524187 | 4_1:-51427400 | Msa0554180:CDS |
TTAAAGGAGAAATGGAATCC+TGG | 0.531099 | 4_1:-51424550 | Msa0554180:CDS |
GTGCAGCCTAGTTCCATTGG+AGG | 0.531680 | 4_1:-51425578 | Msa0554180:CDS |
CCTAGTTCCATTGGAGGTGG+AGG | 0.532586 | 4_1:-51425572 | Msa0554180:intron |
TGTCTGTGGATGATAGTATC+TGG | 0.532717 | 4_1:-51424573 | Msa0554180:CDS |
AAACATATTACAATCCAAGT+TGG | 0.534996 | 4_1:-51427039 | Msa0554180:CDS |
TAGAAGACTATTACCTCTCC+AGG | 0.535337 | 4_1:+51424532 | None:intergenic |
CAGCCTAGTTCCATTGGAGG+TGG | 0.537156 | 4_1:-51425575 | Msa0554180:CDS |
TGGAACTGGGAAGTAGAACC+TGG | 0.538756 | 4_1:+51425360 | None:intergenic |
TTCAGCAAGAGAAACCACTT+TGG | 0.543236 | 4_1:-51428213 | Msa0554180:CDS |
CTAGTGTTATTGAACCCAAC+GGG | 0.544107 | 4_1:+51425330 | None:intergenic |
CAACCCCGCTGGTGTAGGAA+AGG | 0.545368 | 4_1:+51425392 | None:intergenic |
GTTCAAAACTTCCAATCCAA+TGG | 0.547317 | 4_1:-51426957 | Msa0554180:CDS |
TTGATTGTTTACAAGAAGAA+CGG | 0.550402 | 4_1:-51430592 | Msa0554180:five_prime_UTR |
GCTTATGAGGATAATAAGAA+AGG | 0.550923 | 4_1:-51427378 | Msa0554180:CDS |
CCTGTCAACCCCGCTGGTGT+AGG | 0.552858 | 4_1:+51425387 | None:intergenic |
GGAAACCCTGTCAACCCCGC+TGG | 0.553188 | 4_1:+51425381 | None:intergenic |
ATTGTAATCAGTATCAATCA+AGG | 0.559423 | 4_1:+51424012 | None:intergenic |
CTACACCAGCGGGGTTGACA+GGG | 0.559612 | 4_1:-51425386 | Msa0554180:CDS |
AACGGGTGGTTGTTGGAACT+GGG | 0.561218 | 4_1:+51425347 | None:intergenic |
TGACGTGGAGTGCCGTTCTG+GGG | 0.565499 | 4_1:+51428937 | None:intergenic |
ATTGTTACCTTTCAAAGCCA+GGG | 0.569637 | 4_1:+51426796 | None:intergenic |
ACTCAAAACTTCCAATCCAA+TGG | 0.572511 | 4_1:-51426906 | Msa0554180:CDS |
CAGTTCCAACAACCACCCGT+TGG | 0.575425 | 4_1:-51425345 | Msa0554180:CDS |
AACAATCAACTTCTCACACC+AGG | 0.581432 | 4_1:+51430606 | None:intergenic |
ACCCCGCTGGTGTAGGAAAG+GGG | 0.586779 | 4_1:+51425394 | None:intergenic |
CTGGGTGCTTCACTGAACCC+TGG | 0.589919 | 4_1:-51426813 | Msa0554180:CDS |
TCAGGAAATCTATTCGGCAG+TGG | 0.590143 | 4_1:-51425438 | Msa0554180:CDS |
GTACTCATTAATGGTGCAGA+GGG | 0.590273 | 4_1:+51425605 | None:intergenic |
CACAGACACATTCTCCACTT+GGG | 0.605135 | 4_1:+51424588 | None:intergenic |
TACAGAGTTATATCAACTGG+TGG | 0.607159 | 4_1:-51424093 | Msa0554180:three_prime_UTR |
GTTTGAAGTGTGAAGTGAAG+TGG | 0.610923 | 4_1:-51430562 | Msa0554180:five_prime_UTR |
TTGAAGATGTACAGATCCTG+AGG | 0.613427 | 4_1:-51428263 | Msa0554180:intron |
TGGTTGAAAGGCATTTACAT+TGG | 0.615390 | 4_1:+51426932 | None:intergenic |
TTGCAGAAATGCGTCCCAAG+TGG | 0.622726 | 4_1:-51424602 | Msa0554180:intron |
TTACAAGAAGAACGGTGTCG+CGG | 0.629904 | 4_1:-51430584 | Msa0554180:five_prime_UTR |
TTGAAAACAACAAATGGAGT+CGG | 0.631566 | 4_1:-51428972 | Msa0554180:CDS |
GCTAGTGTTATTGAACCCAA+CGG | 0.631795 | 4_1:+51425329 | None:intergenic |
TCTTCATCCAAGCCCCAGAA+CGG | 0.633134 | 4_1:-51428949 | Msa0554180:CDS |
TACCAAACAAATCTATCTGG+AGG | 0.634565 | 4_1:+51424181 | None:intergenic |
TGCTGCCTGAAACATTGTAG+TGG | 0.637731 | 4_1:+51425305 | None:intergenic |
GGTTCAGTGAAGCACCCAGT+TGG | 0.640946 | 4_1:+51426817 | None:intergenic |
GTGTTATTGAACCCAACGGG+TGG | 0.644954 | 4_1:+51425333 | None:intergenic |
TTCGGCAGTGGAATCTCAGG+TGG | 0.654074 | 4_1:-51425426 | Msa0554180:CDS |
TGGATGGGCAACGAGAAATG+AGG | 0.659581 | 4_1:-51424073 | Msa0554180:three_prime_UTR |
AGTACTCATTAATGGTGCAG+AGG | 0.660040 | 4_1:+51425604 | None:intergenic |
GGAGAAATGGAATCCTGGAG+AGG | 0.663151 | 4_1:-51424545 | Msa0554180:intron |
CAACCCCTTTCCTACACCAG+CGG | 0.664582 | 4_1:-51425397 | Msa0554180:CDS |
ATTTGTCAACACTTCCTGCG+AGG | 0.674428 | 4_1:-51430513 | Msa0554180:CDS |
ATATCTCCAACAATGTCACA+AGG | 0.680130 | 4_1:+51427426 | None:intergenic |
CCAAGTGGAGAATGTGTCTG+TGG | 0.682566 | 4_1:-51424587 | Msa0554180:CDS |
TAGCATGTAAGAATCCAAAG+TGG | 0.688033 | 4_1:+51428199 | None:intergenic |
ATGGGCAACGAGAAATGAGG+AGG | 0.688805 | 4_1:-51424070 | Msa0554180:three_prime_UTR |
GATTTGTTATCAGACTGACG+TGG | 0.704707 | 4_1:+51428922 | None:intergenic |
ACCCCTTTCCTACACCAGCG+GGG | 0.708861 | 4_1:-51425395 | Msa0554180:CDS |
ACGTTGAGAGAAGACGTCAG+AGG | 0.742655 | 4_1:+51426978 | None:intergenic |
TGTATAGGCATGTGACACAG+CGG | 0.754121 | 4_1:-51424150 | Msa0554180:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAAATATGTTGTTTT+TGG | - | chr4_1:51425264-51425283 | Msa0554180:intron | 10.0% |
!!! | AAATTGTATAGATTTTTGTT+CGG | - | chr4_1:51423915-51423934 | Msa0554180:three_prime_UTR | 15.0% |
!!! | ATTTTTAACTTTGAAAACAA+AGG | + | chr4_1:51425156-51425175 | None:intergenic | 15.0% |
!! | ATTACGTAATTATATTAACA+AGG | + | chr4_1:51425552-51425571 | None:intergenic | 15.0% |
!! | AATAATATATTGCTTAATCA+TGG | - | chr4_1:51426484-51426503 | Msa0554180:intron | 15.0% |
!! | AATTTACTAAAGAAATAAGT+AGG | + | chr4_1:51427389-51427408 | None:intergenic | 15.0% |
!! | GTAACAATATATATATTTCA+AGG | + | chr4_1:51427513-51427532 | None:intergenic | 15.0% |
!! | TGAAATATATATATTGTTAC+AGG | - | chr4_1:51427513-51427532 | Msa0554180:intron | 15.0% |
!!! | TTTTGTAGTTTTTTTTCTTA+GGG | + | chr4_1:51428828-51428847 | None:intergenic | 15.0% |
!! | AATAATTAAAAAAATACACG+TGG | - | chr4_1:51428728-51428747 | Msa0554180:intron | 15.0% |
!!! | TTTTGTAGTTTTTTTTCTTA+AGG | - | chr4_1:51428828-51428847 | Msa0554180:intron | 15.0% |
!!! | TTTGTAGTTTTTTTTCTTAA+GGG | - | chr4_1:51428829-51428848 | Msa0554180:intron | 15.0% |
!! | CAAATTATAACATTTATAAC+TGG | + | chr4_1:51429669-51429688 | None:intergenic | 15.0% |
!! | CAGTTATAAATGTTATAATT+TGG | - | chr4_1:51429667-51429686 | Msa0554180:intron | 15.0% |
!!! | ATATTTTAAAATTCAAGTGT+TGG | - | chr4_1:51430299-51430318 | Msa0554180:intron | 15.0% |
!!! | TATTTTAAAATTCAAGTGTT+GGG | - | chr4_1:51430300-51430319 | Msa0554180:intron | 15.0% |
!!! | TTGTTATACCTTTTTTTTAC+TGG | - | chr4_1:51423943-51423962 | Msa0554180:three_prime_UTR | 20.0% |
!! | AGAGAACATCTAATAATAAT+GGG | - | chr4_1:51424247-51424266 | Msa0554180:intron | 20.0% |
!!! | ATAATTCTATACTGTCTTTT+AGG | - | chr4_1:51424459-51424478 | Msa0554180:intron | 20.0% |
!!! | TAATTCTATACTGTCTTTTA+GGG | - | chr4_1:51424460-51424479 | Msa0554180:intron | 20.0% |
!!! | TTTTTTTTAAGAAGCTTAAC+TGG | + | chr4_1:51424738-51424757 | None:intergenic | 20.0% |
!! | TTTAATTAGCTATTTGTGTT+TGG | - | chr4_1:51425067-51425086 | Msa0554180:intron | 20.0% |
!! | TCAAAGTTAAAAATAGAACT+TGG | - | chr4_1:51425162-51425181 | Msa0554180:intron | 20.0% |
!!! | ATCATTTGTTTTAGTATTGA+TGG | - | chr4_1:51425570-51425589 | Msa0554180:intron | 20.0% |
!!! | TTTTCTATTCAGAAGTAAAA+GGG | + | chr4_1:51425834-51425853 | None:intergenic | 20.0% |
!! | TAAATATAATTAGATAGGGA+GGG | + | chr4_1:51426137-51426156 | None:intergenic | 20.0% |
!! | ATAAATATAATTAGATAGGG+AGG | + | chr4_1:51426138-51426157 | None:intergenic | 20.0% |
!!! | GGTATTATTTTTATGCATAA+GGG | - | chr4_1:51426426-51426445 | Msa0554180:intron | 20.0% |
!! | ATATTAGCTATGAAGAATTA+CGG | - | chr4_1:51427181-51427200 | Msa0554180:intron | 20.0% |
!! | ATTTGGATATTTCTTGATTT+AGG | + | chr4_1:51427871-51427890 | None:intergenic | 20.0% |
!!! | ATCTACTATTTGTTTTTGTT+TGG | - | chr4_1:51428036-51428055 | Msa0554180:intron | 20.0% |
!!! | TCTACTATTTGTTTTTGTTT+GGG | - | chr4_1:51428037-51428056 | Msa0554180:intron | 20.0% |
!!! | GTGTATTTTGTTTTTTTGAA+TGG | - | chr4_1:51428268-51428287 | Msa0554180:intron | 20.0% |
!!! | TTAATGTTAGTTTTTTGTTG+TGG | - | chr4_1:51428312-51428331 | Msa0554180:intron | 20.0% |
!!! | TAATGTTAGTTTTTTGTTGT+GGG | - | chr4_1:51428313-51428332 | Msa0554180:intron | 20.0% |
!!! | ATCTTGTTCCTTTATTTTAT+AGG | - | chr4_1:51428440-51428459 | Msa0554180:intron | 20.0% |
!! | CTATTAAGCCTATAAAATAA+AGG | + | chr4_1:51428451-51428470 | None:intergenic | 20.0% |
!!! | TTTGTAGTTTTTTTTCTTAG+GGG | + | chr4_1:51428515-51428534 | None:intergenic | 20.0% |
!!! | GTTTTGTAGTTTTTTTTCTT+AGG | + | chr4_1:51428827-51428846 | None:intergenic | 20.0% |
!!! | TTGTAGTTTTTTTTCTTAAG+GGG | - | chr4_1:51428830-51428849 | Msa0554180:intron | 20.0% |
!! | AATCATGAGAATATCAAAAT+AGG | + | chr4_1:51428904-51428923 | None:intergenic | 20.0% |
!! | AATCTTTAAACTGTAACATA+TGG | + | chr4_1:51429738-51429757 | None:intergenic | 20.0% |
!!! | GATTAAGAAGATTTTAATGT+TGG | - | chr4_1:51429754-51429773 | Msa0554180:intron | 20.0% |
!!! | ATACTTTTTCTTGAATCTTA+TGG | - | chr4_1:51429953-51429972 | Msa0554180:intron | 20.0% |
!!! | ATTTTAAAATTCAAGTGTTG+GGG | - | chr4_1:51430301-51430320 | Msa0554180:intron | 20.0% |
!! | AAAAAAAACACATAACTAAG+GGG | + | chr4_1:51430602-51430621 | None:intergenic | 20.0% |
!! | GAAAAAAAACACATAACTAA+GGG | + | chr4_1:51430603-51430622 | None:intergenic | 20.0% |
!! | AGAAAAAAAACACATAACTA+AGG | + | chr4_1:51430604-51430623 | None:intergenic | 20.0% |
!! | TTGTAACATGACAAAAATTA+TGG | - | chr4_1:51430716-51430735 | Msa0554180:five_prime_UTR | 20.0% |
!!! | ACAGAAAAATTTCAGTTTTA+GGG | - | chr4_1:51430746-51430765 | Msa0554180:five_prime_UTR | 20.0% |
!!! | CTTTTTCACCAGTAAAAAAA+AGG | + | chr4_1:51423954-51423973 | None:intergenic | 25.0% |
! | TTGATTGTTTACAAGAAGAA+CGG | - | chr4_1:51423996-51424015 | Msa0554180:three_prime_UTR | 25.0% |
!! | CATAATCGATTATGTGTTTT+CGG | - | chr4_1:51424136-51424155 | Msa0554180:three_prime_UTR | 25.0% |
! | CAGAGAACATCTAATAATAA+TGG | - | chr4_1:51424246-51424265 | Msa0554180:intron | 25.0% |
!!! | ACATCTAATAATAATGGGTT+TGG | - | chr4_1:51424252-51424271 | Msa0554180:intron | 25.0% |
! | TAGTATTCAAGACTATCTAA+TGG | - | chr4_1:51424496-51424515 | Msa0554180:intron | 25.0% |
! | ACTCTCAAGAGTTTATTAAA+TGG | + | chr4_1:51425027-51425046 | None:intergenic | 25.0% |
!!! | AACATTTTTTTTGAAACGCA+CGG | + | chr4_1:51425111-51425130 | None:intergenic | 25.0% |
! | TTAAAAATAGAACTTGGAGA+TGG | - | chr4_1:51425168-51425187 | Msa0554180:intron | 25.0% |
! | ACTGGTTATGTTAATTTCTA+GGG | + | chr4_1:51425323-51425342 | None:intergenic | 25.0% |
!! | TACTGGTTATGTTAATTTCT+AGG | + | chr4_1:51425324-51425343 | None:intergenic | 25.0% |
! | TCACAATCTGTATATACTAT+GGG | + | chr4_1:51425463-51425482 | None:intergenic | 25.0% |
! | TTCACAATCTGTATATACTA+TGG | + | chr4_1:51425464-51425483 | None:intergenic | 25.0% |
! | TAGGCATGTATTATAAACAA+TGG | + | chr4_1:51425514-51425533 | None:intergenic | 25.0% |
!! | GTTTTCTATTCAGAAGTAAA+AGG | + | chr4_1:51425835-51425854 | None:intergenic | 25.0% |
! | AATAGAAAACATAAAAAGCC+AGG | - | chr4_1:51425845-51425864 | Msa0554180:intron | 25.0% |
! | AAAAATGACTACAAATGTGA+AGG | + | chr4_1:51426084-51426103 | None:intergenic | 25.0% |
!!! | TCACATTTGTAGTCATTTTT+CGG | - | chr4_1:51426084-51426103 | Msa0554180:intron | 25.0% |
! | AAATATAATTAGATAGGGAG+GGG | + | chr4_1:51426136-51426155 | None:intergenic | 25.0% |
! | GTGGAAAAAGAAAAAGAAAA+AGG | + | chr4_1:51426241-51426260 | None:intergenic | 25.0% |
! | TTATATACTTCACTAAAGCT+TGG | - | chr4_1:51426293-51426312 | Msa0554180:intron | 25.0% |
!!! | GGGTATTATTTTTATGCATA+AGG | - | chr4_1:51426425-51426444 | Msa0554180:intron | 25.0% |
! | AATATATTGCTTAATCATGG+AGG | - | chr4_1:51426487-51426506 | Msa0554180:intron | 25.0% |
! | TGTTAAATGTGAAGAATAGA+TGG | + | chr4_1:51426622-51426641 | None:intergenic | 25.0% |
! | AGGAAATGTATAATGATTAG+CGG | + | chr4_1:51426654-51426673 | None:intergenic | 25.0% |
!!! | TGATTTTCAAGGATAAGTAA+GGG | + | chr4_1:51426692-51426711 | None:intergenic | 25.0% |
!!! | ATGATTTTCAAGGATAAGTA+AGG | + | chr4_1:51426693-51426712 | None:intergenic | 25.0% |
!!! | AACTTCTGAAATGATTTTCA+AGG | + | chr4_1:51426703-51426722 | None:intergenic | 25.0% |
! | CTTTGTAATGCAAATGAAAA+TGG | + | chr4_1:51426760-51426779 | None:intergenic | 25.0% |
! | TGGAATTTGAATGAAAAATG+TGG | + | chr4_1:51426823-51426842 | None:intergenic | 25.0% |
! | AATGCTCTATTAAAGTTTGT+TGG | + | chr4_1:51426843-51426862 | None:intergenic | 25.0% |
! | ACAAGGAATAAAAAAAGTTC+CGG | - | chr4_1:51426913-51426932 | Msa0554180:CDS | 25.0% |
! | TATTAGCTATGAAGAATTAC+GGG | - | chr4_1:51427182-51427201 | Msa0554180:intron | 25.0% |
! | AATCTCTTAACATCACAAAT+AGG | + | chr4_1:51427296-51427315 | None:intergenic | 25.0% |
! | ACTAAAGAAATAAGTAGGTA+GGG | + | chr4_1:51427384-51427403 | None:intergenic | 25.0% |
! | TACTAAAGAAATAAGTAGGT+AGG | + | chr4_1:51427385-51427404 | None:intergenic | 25.0% |
! | AAACATATTACAATCCAAGT+TGG | - | chr4_1:51427549-51427568 | Msa0554180:intron | 25.0% |
!! | TTTCTTCATTTTCAATTGTG+TGG | - | chr4_1:51427832-51427851 | Msa0554180:intron | 25.0% |
!!! | ATATCCAAATTTTAGCTAAC+AGG | - | chr4_1:51427881-51427900 | Msa0554180:intron | 25.0% |
!!! | TTTGTTTTTGTTTGGGATTA+TGG | - | chr4_1:51428044-51428063 | Msa0554180:intron | 25.0% |
! | CATGTATCTTTCTATTATAG+TGG | - | chr4_1:51428094-51428113 | Msa0554180:intron | 25.0% |
! | CTTTCTATTATAGTGGTTTA+AGG | - | chr4_1:51428101-51428120 | Msa0554180:intron | 25.0% |
!!! | CATCATTTTAGGTATGTAAT+CGG | + | chr4_1:51428212-51428231 | None:intergenic | 25.0% |
!! | CATAAGAAAACCATCATTTT+AGG | + | chr4_1:51428223-51428242 | None:intergenic | 25.0% |
!! | AATGATGGTTTTCTTATGTT+TGG | - | chr4_1:51428225-51428244 | Msa0554180:CDS | 25.0% |
! | ACAAGATATAAACATTGCAT+GGG | + | chr4_1:51428427-51428446 | None:intergenic | 25.0% |
! | AACAAGATATAAACATTGCA+TGG | + | chr4_1:51428428-51428447 | None:intergenic | 25.0% |
!!! | TTGTAGTTTTTTTTCTTAGG+GGG | + | chr4_1:51428514-51428533 | None:intergenic | 25.0% |
!!! | TTTTTTTTTATGTCTGCTCT+TGG | - | chr4_1:51428926-51428945 | Msa0554180:CDS | 25.0% |
!! | GAAAGTTGTACAACTATTTT+TGG | + | chr4_1:51429414-51429433 | None:intergenic | 25.0% |
! | TATGTATGTATGTATCACAA+AGG | + | chr4_1:51430166-51430185 | None:intergenic | 25.0% |
! | GATACATACATACATAGTAT+TGG | - | chr4_1:51430170-51430189 | Msa0554180:intron | 25.0% |
!! | GATATGTTTTCTCAATTTGT+GGG | - | chr4_1:51430323-51430342 | Msa0554180:intron | 25.0% |
! | AATTACAGAGTTATATCAAC+TGG | - | chr4_1:51430492-51430511 | Msa0554180:intron | 25.0% |
! | ATTGTAATCAGTATCAATCA+AGG | + | chr4_1:51430579-51430598 | None:intergenic | 25.0% |
!!! | ACATATGACATGATTTTTTC+AGG | + | chr4_1:51430628-51430647 | None:intergenic | 25.0% |
! | TGAAAAAATCATGTCATATG+TGG | - | chr4_1:51430627-51430646 | Msa0554180:five_prime_UTR | 25.0% |
! | TTGTCATGTTACAATGAAAA+AGG | + | chr4_1:51430710-51430729 | None:intergenic | 25.0% |
!! | AACTGAAATTTTTCTGTCTT+AGG | + | chr4_1:51430743-51430762 | None:intergenic | 25.0% |
!! | GACAGAAAAATTTCAGTTTT+AGG | - | chr4_1:51430745-51430764 | Msa0554180:five_prime_UTR | 25.0% |
!!! | CAGAAAAATTTCAGTTTTAG+GGG | - | chr4_1:51430747-51430766 | Msa0554180:five_prime_UTR | 25.0% |
!! | TCTAATAATAATGGGTTTGG+TGG | - | chr4_1:51424255-51424274 | Msa0554180:intron | 30.0% |
! | CAACAAAATACAAACCCTTT+TGG | - | chr4_1:51424291-51424310 | Msa0554180:intron | 30.0% |
! | AATACAAACCCTTTTGGATT+TGG | - | chr4_1:51424297-51424316 | Msa0554180:intron | 30.0% |
TTTGTGAACCAAAACCAAAA+GGG | + | chr4_1:51424362-51424381 | None:intergenic | 30.0% | |
! | TTTTGTGAACCAAAACCAAA+AGG | + | chr4_1:51424363-51424382 | None:intergenic | 30.0% |
AAAACACTTCTCACTCAAAT+GGG | - | chr4_1:51424379-51424398 | Msa0554180:intron | 30.0% | |
AGTAAATAAGAACCTGGAAT+TGG | + | chr4_1:51424431-51424450 | None:intergenic | 30.0% | |
GAAAAGAGTAAATAAGAACC+TGG | + | chr4_1:51424437-51424456 | None:intergenic | 30.0% | |
TAGGAAATACTAATACATCG+AGG | - | chr4_1:51424611-51424630 | Msa0554180:intron | 30.0% | |
CTGAATGTAATCACATTTGT+TGG | - | chr4_1:51424786-51424805 | Msa0554180:intron | 30.0% | |
! | ATCAAGTTGTTTATCCAAAC+AGG | - | chr4_1:51424976-51424995 | Msa0554180:intron | 30.0% |
! | TCAAGTTGTTTATCCAAACA+GGG | - | chr4_1:51424977-51424996 | Msa0554180:intron | 30.0% |
AATCTGTATATACTATGGGA+TGG | + | chr4_1:51425459-51425478 | None:intergenic | 30.0% | |
AAGGAACACAACAATGATAT+AGG | + | chr4_1:51425533-51425552 | None:intergenic | 30.0% | |
!!! | ACTCCATTTGTTGTTTTCAA+GGG | + | chr4_1:51425616-51425635 | None:intergenic | 30.0% |
TTGAAAACAACAAATGGAGT+CGG | - | chr4_1:51425616-51425635 | Msa0554180:intron | 30.0% | |
TGTTTATGTTTGATGAGAGA+TGG | + | chr4_1:51425733-51425752 | None:intergenic | 30.0% | |
AAAATAATGCCACCTATTGT+TGG | - | chr4_1:51425801-51425820 | Msa0554180:intron | 30.0% | |
ACATCAAAGACAAAATCCTA+AGG | + | chr4_1:51425916-51425935 | None:intergenic | 30.0% | |
!!! | CACATTTGTAGTCATTTTTC+GGG | - | chr4_1:51426085-51426104 | Msa0554180:intron | 30.0% |
!!! | ACATTTGTAGTCATTTTTCG+GGG | - | chr4_1:51426086-51426105 | Msa0554180:intron | 30.0% |
ACAAACATTGATAAGGAACA+TGG | + | chr4_1:51426210-51426229 | None:intergenic | 30.0% | |
ATGTTCCTTATCAATGTTTG+TGG | - | chr4_1:51426209-51426228 | Msa0554180:intron | 30.0% | |
! | TTTCTTTTTCCACTTTGCAT+TGG | - | chr4_1:51426248-51426267 | Msa0554180:intron | 30.0% |
! | TTCTTTTTCCACTTTGCATT+GGG | - | chr4_1:51426249-51426268 | Msa0554180:intron | 30.0% |
! | TCAAAACCTCTTTCATCTTT+TGG | + | chr4_1:51426731-51426750 | None:intergenic | 30.0% |
!! | AAAGATGAAAGAGGTTTTGA+TGG | - | chr4_1:51426731-51426750 | Msa0554180:intron | 30.0% |
!! | AAGATGAAAGAGGTTTTGAT+GGG | - | chr4_1:51426732-51426751 | Msa0554180:intron | 30.0% |
! | TTCAGGTTCATTTCAATAGA+TGG | + | chr4_1:51426970-51426989 | None:intergenic | 30.0% |
! | TCTCTTTTCAGTATAGAAGT+TGG | + | chr4_1:51427018-51427037 | None:intergenic | 30.0% |
TCAAGAGTGGAAAATTGATT+AGG | + | chr4_1:51427042-51427061 | None:intergenic | 30.0% | |
TCTTAACTAGTGCACTAATA+CGG | - | chr4_1:51427083-51427102 | Msa0554180:intron | 30.0% | |
GCTTATGAGGATAATAAGAA+AGG | - | chr4_1:51427210-51427229 | Msa0554180:intron | 30.0% | |
AACAGGTTTCTTACAATTTG+TGG | + | chr4_1:51427246-51427265 | None:intergenic | 30.0% | |
TTTGTTAAACTCAACCAACT+TGG | + | chr4_1:51427566-51427585 | None:intergenic | 30.0% | |
!!! | TAAAGGACCATTATTTTGAG+TGG | + | chr4_1:51427734-51427753 | None:intergenic | 30.0% |
TTTGCCTGTTAGCTAAAATT+TGG | + | chr4_1:51427888-51427907 | None:intergenic | 30.0% | |
TAGATAGCAGTTGTAGAAAA+AGG | + | chr4_1:51428021-51428040 | None:intergenic | 30.0% | |
ATTATGGTGTGATTGTCAAA+AGG | - | chr4_1:51428060-51428079 | Msa0554180:intron | 30.0% | |
TTATGGTGTGATTGTCAAAA+GGG | - | chr4_1:51428061-51428080 | Msa0554180:intron | 30.0% | |
CGATTACATACCTAAAATGA+TGG | - | chr4_1:51428210-51428229 | Msa0554180:CDS | 30.0% | |
TTGCAACTTCTTGAAACTTA+GGG | + | chr4_1:51428485-51428504 | None:intergenic | 30.0% | |
ATTGCAACTTCTTGAAACTT+AGG | + | chr4_1:51428486-51428505 | None:intergenic | 30.0% | |
! | GTTTCAAGAAGTTGCAATTT+TGG | - | chr4_1:51428488-51428507 | Msa0554180:intron | 30.0% |
CTGTTTGTAACTTTCTTGTT+AGG | - | chr4_1:51428960-51428979 | Msa0554180:CDS | 30.0% | |
TACAGTTTATCACAACATCA+TGG | + | chr4_1:51429109-51429128 | None:intergenic | 30.0% | |
ATGATGTTGTGATAAACTGT+AGG | - | chr4_1:51429108-51429127 | Msa0554180:intron | 30.0% | |
GGATTTGATTAAATTGTCAC+AGG | + | chr4_1:51429372-51429391 | None:intergenic | 30.0% | |
GGTTGACTATTGAATGAAAA+TGG | + | chr4_1:51429393-51429412 | None:intergenic | 30.0% | |
ATTGGGTCATTTACTTTGTA+GGG | + | chr4_1:51429642-51429661 | None:intergenic | 30.0% | |
AATTGGGTCATTTACTTTGT+AGG | + | chr4_1:51429643-51429662 | None:intergenic | 30.0% | |
CATTTATAACTGGTGCAATT+GGG | + | chr4_1:51429659-51429678 | None:intergenic | 30.0% | |
ACATTTATAACTGGTGCAAT+TGG | + | chr4_1:51429660-51429679 | None:intergenic | 30.0% | |
TCAATACTAACAAAAGTTGG+AGG | + | chr4_1:51429842-51429861 | None:intergenic | 30.0% | |
GGTTCAATACTAACAAAAGT+TGG | + | chr4_1:51429845-51429864 | None:intergenic | 30.0% | |
! | TTGTTAGTATTGAACCTACT+TGG | - | chr4_1:51429849-51429868 | Msa0554180:intron | 30.0% |
! | TCACAAAGGAAATTTTGTCA+TGG | + | chr4_1:51430152-51430171 | None:intergenic | 30.0% |
TATTGGATAGAATCTGCAAT+AGG | - | chr4_1:51430187-51430206 | Msa0554180:intron | 30.0% | |
!! | TTCTGCCAAATTTTAATGCT+CGG | + | chr4_1:51430255-51430274 | None:intergenic | 30.0% |
! | GGATATGTTTTCTCAATTTG+TGG | - | chr4_1:51430322-51430341 | Msa0554180:intron | 30.0% |
GGTGAAAAAGAATTGAAACC+TGG | - | chr4_1:51423964-51423983 | Msa0554180:three_prime_UTR | 35.0% | |
CAAGATGTAGTATAGAGAAG+AGG | + | chr4_1:51424110-51424129 | None:intergenic | 35.0% | |
CTCTTCTCTATACTACATCT+TGG | - | chr4_1:51424108-51424127 | Msa0554180:three_prime_UTR | 35.0% | |
! | TCATGTTTCAGGTGTAGATT+TGG | - | chr4_1:51424186-51424205 | Msa0554180:CDS | 35.0% |
!! | AATAATAATGGGTTTGGTGG+TGG | - | chr4_1:51424258-51424277 | Msa0554180:intron | 35.0% |
AGGTAGAACCAAATCCAAAA+GGG | + | chr4_1:51424308-51424327 | None:intergenic | 35.0% | |
CAAAACACTTCTCACTCAAA+TGG | - | chr4_1:51424378-51424397 | Msa0554180:intron | 35.0% | |
AAACACTTCTCACTCAAATG+GGG | - | chr4_1:51424380-51424399 | Msa0554180:intron | 35.0% | |
!! | TTTGGTTTGAAATCAGAACG+AGG | + | chr4_1:51424408-51424427 | None:intergenic | 35.0% |
TTTCAAACCAAACCAATTCC+AGG | - | chr4_1:51424416-51424435 | Msa0554180:intron | 35.0% | |
ATAAGAACCTGGAATTGGTT+TGG | + | chr4_1:51424426-51424445 | None:intergenic | 35.0% | |
!!! | ACTGTCTTTTAGGGTCTATT+TGG | - | chr4_1:51424469-51424488 | Msa0554180:intron | 35.0% |
AATGGCATAAGCAGACTATT+TGG | - | chr4_1:51424514-51424533 | Msa0554180:intron | 35.0% | |
CATAAGCAGACTATTTGGTA+GGG | - | chr4_1:51424519-51424538 | Msa0554180:intron | 35.0% | |
TCAATAAGCTCTTCATGACT+AGG | - | chr4_1:51424592-51424611 | Msa0554180:CDS | 35.0% | |
! | GTAATCACATTTGTTGGTGT+TGG | - | chr4_1:51424792-51424811 | Msa0554180:intron | 35.0% |
!! | ACACTTTTGATTGAAGGTGT+AGG | + | chr4_1:51424830-51424849 | None:intergenic | 35.0% |
! | ACACCTTCAATCAAAAGTGT+TGG | - | chr4_1:51424830-51424849 | Msa0554180:intron | 35.0% |
ACTCTTGAGAGTTTATGTCA+TGG | - | chr4_1:51425035-51425054 | Msa0554180:intron | 35.0% | |
TTGAGAGTTTATGTCATGGA+TGG | - | chr4_1:51425039-51425058 | Msa0554180:intron | 35.0% | |
ATGTTGAATAGCTCTTTGCA+TGG | - | chr4_1:51425126-51425145 | Msa0554180:intron | 35.0% | |
AATAGAACTTGGAGATGGAT+AGG | - | chr4_1:51425173-51425192 | Msa0554180:intron | 35.0% | |
ATAGAACTTGGAGATGGATA+GGG | - | chr4_1:51425174-51425193 | Msa0554180:intron | 35.0% | |
!!! | TTTTGGCAATAGTTTTGAGC+AGG | - | chr4_1:51425281-51425300 | Msa0554180:intron | 35.0% |
ATAGACAGATGTTAAGCTAC+TGG | + | chr4_1:51425341-51425360 | None:intergenic | 35.0% | |
!!! | CTCCATTTGTTGTTTTCAAG+GGG | + | chr4_1:51425615-51425634 | None:intergenic | 35.0% |
!!! | GACTCCATTTGTTGTTTTCA+AGG | + | chr4_1:51425617-51425636 | None:intergenic | 35.0% |
! | AAGGGCATATATCCAACAAT+AGG | + | chr4_1:51425816-51425835 | None:intergenic | 35.0% |
GTTATAGACTCATGATCCTT+AGG | - | chr4_1:51425897-51425916 | Msa0554180:intron | 35.0% | |
AAGAGCCACAAACATTGATA+AGG | + | chr4_1:51426217-51426236 | None:intergenic | 35.0% | |
GCTGAAAATCTTCTACAATC+TGG | + | chr4_1:51426361-51426380 | None:intergenic | 35.0% | |
TAGCATGTAAGAATCCAAAG+TGG | + | chr4_1:51426392-51426411 | None:intergenic | 35.0% | |
CTTTGGATTCTTACATGCTA+TGG | - | chr4_1:51426392-51426411 | Msa0554180:intron | 35.0% | |
!! | TGCACAACTTTTGAGGAATA+TGG | + | chr4_1:51426558-51426577 | None:intergenic | 35.0% |
! | GATAAGTAAGGGATTAGCAA+GGG | + | chr4_1:51426681-51426700 | None:intergenic | 35.0% |
!! | AGATGAAAGAGGTTTTGATG+GGG | - | chr4_1:51426733-51426752 | Msa0554180:intron | 35.0% |
TCAGTTCACAGTTTGTAACA+AGG | - | chr4_1:51426896-51426915 | Msa0554180:CDS | 35.0% | |
!! | AGCTATTTCTCTTTCAAGAG+TGG | + | chr4_1:51427055-51427074 | None:intergenic | 35.0% |
ATATCTCCAACAATGTCACA+AGG | + | chr4_1:51427165-51427184 | None:intergenic | 35.0% | |
AACTGTAGGCATATTAGAAC+AGG | + | chr4_1:51427263-51427282 | None:intergenic | 35.0% | |
CTAATATGCCTACAGTTTCA+CGG | - | chr4_1:51427266-51427285 | Msa0554180:intron | 35.0% | |
AAATAAGTAGGTAGGGCTTA+AGG | + | chr4_1:51427377-51427396 | None:intergenic | 35.0% | |
TACTCATGTTTGCAACTACA+AGG | - | chr4_1:51427452-51427471 | Msa0554180:intron | 35.0% | |
TATGTTCATGCGATTGTCTA+TGG | - | chr4_1:51427482-51427501 | Msa0554180:intron | 35.0% | |
GTTCAAAACTTCCAATCCAA+TGG | - | chr4_1:51427631-51427650 | Msa0554180:intron | 35.0% | |
!! | TTACATTGGTTCCATTGGAT+TGG | + | chr4_1:51427645-51427664 | None:intergenic | 35.0% |
!! | TGGTTGAAAGGCATTTACAT+TGG | + | chr4_1:51427659-51427678 | None:intergenic | 35.0% |
!!! | ATTGGATTGGAAGTTTTGAG+TGG | + | chr4_1:51427683-51427702 | None:intergenic | 35.0% |
ACTCAAAACTTCCAATCCAA+TGG | - | chr4_1:51427682-51427701 | Msa0554180:intron | 35.0% | |
CTAAAGCTTGAGACTGATAA+AGG | + | chr4_1:51427751-51427770 | None:intergenic | 35.0% | |
ATTGTTACCTTTCAAAGCCA+GGG | + | chr4_1:51427795-51427814 | None:intergenic | 35.0% | |
CAAAGAGCTTAACTGCTATA+CGG | - | chr4_1:51427909-51427928 | Msa0554180:intron | 35.0% | |
ATCGTATAGAGATATTGACG+AGG | - | chr4_1:51427938-51427957 | Msa0554180:intron | 35.0% | |
AAAGTAGGTCACAAACAATC+AGG | + | chr4_1:51427964-51427983 | None:intergenic | 35.0% | |
TGTGACCTACTTTCTTTAGT+TGG | - | chr4_1:51427971-51427990 | Msa0554180:intron | 35.0% | |
TGCAACCAACTAAAGAAAGT+AGG | + | chr4_1:51427979-51427998 | None:intergenic | 35.0% | |
!!! | TGTTAGTTTTTTGTTGTGGG+TGG | - | chr4_1:51428316-51428335 | Msa0554180:intron | 35.0% |
!!! | GTTAGTTTTTTGTTGTGGGT+GGG | - | chr4_1:51428317-51428336 | Msa0554180:intron | 35.0% |
!!! | TTAGTTTTTTGTTGTGGGTG+GGG | - | chr4_1:51428318-51428337 | Msa0554180:intron | 35.0% |
TGCAACTTCTTGAAACTTAG+GGG | + | chr4_1:51428484-51428503 | None:intergenic | 35.0% | |
! | GTTTCAAGAAGTTGCGATTT+TGG | + | chr4_1:51428856-51428875 | None:intergenic | 35.0% |
ATCGCAACTTCTTGAAACTT+AGG | - | chr4_1:51428858-51428877 | Msa0554180:intron | 35.0% | |
TCGCAACTTCTTGAAACTTA+GGG | - | chr4_1:51428859-51428878 | Msa0554180:intron | 35.0% | |
TGAAAATGCTCAAGGTCAAT+GGG | + | chr4_1:51429488-51429507 | None:intergenic | 35.0% | |
CAACTATCTGAAAATGCTCA+AGG | + | chr4_1:51429496-51429515 | None:intergenic | 35.0% | |
!! | GTGAATTACATAAGAGTGTC+AGG | + | chr4_1:51429560-51429579 | None:intergenic | 35.0% |
! | TTTAATGTTGGTAGAGATGC+TGG | - | chr4_1:51429766-51429785 | Msa0554180:intron | 35.0% |
GGATGATAGTATCTGGTTAA+AGG | - | chr4_1:51430022-51430041 | Msa0554180:intron | 35.0% | |
GTATCTGGTTAAAGGAGAAA+TGG | - | chr4_1:51430030-51430049 | Msa0554180:intron | 35.0% | |
TTAAAGGAGAAATGGAATCC+TGG | - | chr4_1:51430038-51430057 | Msa0554180:intron | 35.0% | |
TTGGGAATAAGTGTCTATTC+AGG | - | chr4_1:51430095-51430114 | Msa0554180:intron | 35.0% | |
! | GAATCTGCAATAGGATCTTT+TGG | - | chr4_1:51430196-51430215 | Msa0554180:intron | 35.0% |
TACCAAACAAATCTATCTGG+AGG | + | chr4_1:51430410-51430429 | None:intergenic | 35.0% | |
GTCTACCAAACAAATCTATC+TGG | + | chr4_1:51430413-51430432 | None:intergenic | 35.0% | |
TTTGGTAGACATCTGTGTAT+AGG | - | chr4_1:51430423-51430442 | Msa0554180:intron | 35.0% | |
!!! | CGTATTTTTAGGTCCTTTCT+TGG | - | chr4_1:51430466-51430485 | Msa0554180:intron | 35.0% |
CTCTGTAATTCAACCAAGAA+AGG | + | chr4_1:51430482-51430501 | None:intergenic | 35.0% | |
TACAGAGTTATATCAACTGG+TGG | - | chr4_1:51430495-51430514 | Msa0554180:intron | 35.0% | |
! | AGTTATATCAACTGGTGGAT+GGG | - | chr4_1:51430500-51430519 | Msa0554180:intron | 35.0% |
CAGTATCAATCAAGGACTTT+GGG | + | chr4_1:51430571-51430590 | None:intergenic | 35.0% | |
TCAGTATCAATCAAGGACTT+TGG | + | chr4_1:51430572-51430591 | None:intergenic | 35.0% | |
AACAATCAACTTCTCACACC+AGG | + | chr4_1:51423985-51424004 | None:intergenic | 40.0% | |
! | GTTTGAAGTGTGAAGTGAAG+TGG | - | chr4_1:51424026-51424045 | Msa0554180:three_prime_UTR | 40.0% |
!! | GCGTTTGTTGTTCATGTTTC+AGG | - | chr4_1:51424175-51424194 | Msa0554180:exon | 40.0% |
GAGGTAGAACCAAATCCAAA+AGG | + | chr4_1:51424309-51424328 | None:intergenic | 40.0% | |
!! | CTTTTGTTGCTGGTTGTTAG+AGG | + | chr4_1:51424334-51424353 | None:intergenic | 40.0% |
! | CAACAAAAGACCAACCCTTT+TGG | - | chr4_1:51424345-51424364 | Msa0554180:intron | 40.0% |
!!! | AAGACCAACCCTTTTGGTTT+TGG | - | chr4_1:51424351-51424370 | Msa0554180:intron | 40.0% |
TGAACCAAAACCAAAAGGGT+TGG | + | chr4_1:51424358-51424377 | None:intergenic | 40.0% | |
GCATAAGCAGACTATTTGGT+AGG | - | chr4_1:51424518-51424537 | Msa0554180:intron | 40.0% | |
AGACTATTTGGTAGGGCTTA+TGG | - | chr4_1:51424526-51424545 | Msa0554180:intron | 40.0% | |
GAATCAAACCCAAGACCTTA+AGG | + | chr4_1:51424692-51424711 | None:intergenic | 40.0% | |
!! | GCACCAACACTTTTGATTGA+AGG | + | chr4_1:51424836-51424855 | None:intergenic | 40.0% |
GTTTAGACTAAGACCCTGTT+TGG | + | chr4_1:51424993-51425012 | None:intergenic | 40.0% | |
TTACGAATCAAAGAGAGAGC+AGG | - | chr4_1:51425197-51425216 | Msa0554180:intron | 40.0% | |
TACGAATCAAAGAGAGAGCA+GGG | - | chr4_1:51425198-51425217 | Msa0554180:intron | 40.0% | |
AGCCCCTTGAAAACAACAAA+TGG | - | chr4_1:51425610-51425629 | Msa0554180:intron | 40.0% | |
!! | GATTTGTTATCAGACTGACG+TGG | + | chr4_1:51425669-51425688 | None:intergenic | 40.0% |
AGTGTAGTTTCAACTGAGCA+CGG | - | chr4_1:51425766-51425785 | Msa0554180:intron | 40.0% | |
GGCATATATCCAACAATAGG+TGG | + | chr4_1:51425813-51425832 | None:intergenic | 40.0% | |
TATGCACAGTGTAGGTGTTT+AGG | + | chr4_1:51425871-51425890 | None:intergenic | 40.0% | |
ACTCTGTATATGCACAGTGT+AGG | + | chr4_1:51425879-51425898 | None:intergenic | 40.0% | |
ATGCACTTTGGCTGAAACAA+AGG | + | chr4_1:51425976-51425995 | None:intergenic | 40.0% | |
GAAATGAACCCAATGCAAAG+TGG | + | chr4_1:51426260-51426279 | None:intergenic | 40.0% | |
TTGAAGATGTACAGATCCTG+AGG | - | chr4_1:51426325-51426344 | Msa0554180:intron | 40.0% | |
TTCAGCAAGAGAAACCACTT+TGG | - | chr4_1:51426375-51426394 | Msa0554180:intron | 40.0% | |
ACATGCTATGGTCACTGTAA+AGG | - | chr4_1:51426404-51426423 | Msa0554180:intron | 40.0% | |
CATGCTATGGTCACTGTAAA+GGG | - | chr4_1:51426405-51426424 | Msa0554180:intron | 40.0% | |
GGATCTTTGCTAACTGCATT+AGG | + | chr4_1:51426537-51426556 | None:intergenic | 40.0% | |
ATTCCTCAAAAGTTGTGCAG+TGG | - | chr4_1:51426559-51426578 | Msa0554180:intron | 40.0% | |
! | GGATAAGTAAGGGATTAGCA+AGG | + | chr4_1:51426682-51426701 | None:intergenic | 40.0% |
TGCTGTCCAAAAGATGAAAG+AGG | - | chr4_1:51426722-51426741 | Msa0554180:intron | 40.0% | |
GCATTACAAAGCCAAGTGAT+TGG | - | chr4_1:51426769-51426788 | Msa0554180:intron | 40.0% | |
CCAAGCAAATTCCAATCACT+TGG | + | chr4_1:51426783-51426802 | None:intergenic | 40.0% | |
! | CCAAGTGATTGGAATTTGCT+TGG | - | chr4_1:51426780-51426799 | Msa0554180:intron | 40.0% |
GTTACAAACTGTGAACTGAC+TGG | + | chr4_1:51426895-51426914 | None:intergenic | 40.0% | |
TGAATGCTGTATTGCCCATT+GGG | - | chr4_1:51426938-51426957 | Msa0554180:CDS | 40.0% | |
ATAGATGGTGCATTCCCAAT+GGG | + | chr4_1:51426955-51426974 | None:intergenic | 40.0% | |
AATAGATGGTGCATTCCCAA+TGG | + | chr4_1:51426956-51426975 | None:intergenic | 40.0% | |
AACCTGAAAACATCACCTCA+AGG | - | chr4_1:51426982-51427001 | Msa0554180:CDS | 40.0% | |
! | TTCCTTGAGGTGATGTTTTC+AGG | + | chr4_1:51426987-51427006 | None:intergenic | 40.0% |
TAGGAATTCCGTGAAACTGT+AGG | + | chr4_1:51427277-51427296 | None:intergenic | 40.0% | |
!! | GGCATTTACATTGGTTCCAT+TGG | + | chr4_1:51427650-51427669 | None:intergenic | 40.0% |
!! | TGGTTGAAAGGCATTTGCAT+TGG | + | chr4_1:51427710-51427729 | None:intergenic | 40.0% |
!! | ATTTTGAGTGGCTGGTTGAA+AGG | + | chr4_1:51427722-51427741 | None:intergenic | 40.0% |
CAACCAGCCACTCAAAATAA+TGG | - | chr4_1:51427724-51427743 | Msa0554180:intron | 40.0% | |
CATTGTTACCTTTCAAAGCC+AGG | + | chr4_1:51427796-51427815 | None:intergenic | 40.0% | |
AGAAAAAGGAATCCCTGTAG+AGG | + | chr4_1:51428007-51428026 | None:intergenic | 40.0% | |
CAAGTTCTGTTGAATGACCT+AGG | - | chr4_1:51428169-51428188 | Msa0554180:intron | 40.0% | |
!!! | TAGTTTTTTGTTGTGGGTGG+GGG | - | chr4_1:51428319-51428338 | Msa0554180:intron | 40.0% |
ATATAAGGTGGTTGAGGTGT+GGG | + | chr4_1:51428381-51428400 | None:intergenic | 40.0% | |
GCAACTTCTTGAAACTTAGG+GGG | + | chr4_1:51428861-51428880 | None:intergenic | 40.0% | |
! | ACCGAGTCAAAATTGGCTTA+GGG | - | chr4_1:51428768-51428787 | Msa0554180:intron | 40.0% |
CGCAACTTCTTGAAACTTAG+GGG | - | chr4_1:51428860-51428879 | Msa0554180:intron | 40.0% | |
GCAACTTCTTGAAACTTAGG+GGG | - | chr4_1:51428861-51428880 | Msa0554180:intron | 40.0% | |
TTATGTCTGCTCTTGGCATA+TGG | - | chr4_1:51428933-51428952 | Msa0554180:CDS | 40.0% | |
GTACTCATTAATGGTGCAGA+GGG | + | chr4_1:51428986-51429005 | None:intergenic | 40.0% | |
AGTACTCATTAATGGTGCAG+AGG | + | chr4_1:51428987-51429006 | None:intergenic | 40.0% | |
! | TGCACTGGAGTACTCATTAA+TGG | + | chr4_1:51428995-51429014 | None:intergenic | 40.0% |
CACAACATCATGGTCAAACA+AGG | + | chr4_1:51429099-51429118 | None:intergenic | 40.0% | |
!!! | AACTTTTTCACACCCAACTC+AGG | - | chr4_1:51429132-51429151 | Msa0554180:intron | 40.0% |
CCGAATAGATTTCCTGAGTT+GGG | + | chr4_1:51429147-51429166 | None:intergenic | 40.0% | |
CCCAACTCAGGAAATCTATT+CGG | - | chr4_1:51429144-51429163 | Msa0554180:intron | 40.0% | |
! | CTAGTGTTATTGAACCCAAC+GGG | + | chr4_1:51429261-51429280 | None:intergenic | 40.0% |
! | GCTAGTGTTATTGAACCCAA+CGG | + | chr4_1:51429262-51429281 | None:intergenic | 40.0% |
TAGCTCCACTACAATGTTTC+AGG | - | chr4_1:51429278-51429297 | Msa0554180:intron | 40.0% | |
GTGACTTACAACTGAACATC+TGG | + | chr4_1:51429309-51429328 | None:intergenic | 40.0% | |
CTGAAAATGCTCAAGGTCAA+TGG | + | chr4_1:51429489-51429508 | None:intergenic | 40.0% | |
GAAAGTTAGTGCTGCAACAA+CGG | + | chr4_1:51429883-51429902 | None:intergenic | 40.0% | |
TTGTTGCAGCACTAACTTTC+TGG | - | chr4_1:51429883-51429902 | Msa0554180:intron | 40.0% | |
TGTTGCAGCACTAACTTTCT+GGG | - | chr4_1:51429884-51429903 | Msa0554180:intron | 40.0% | |
TGTCTGTGGATGATAGTATC+TGG | - | chr4_1:51430015-51430034 | Msa0554180:intron | 40.0% | |
TAGAAGACTATTACCTCTCC+AGG | + | chr4_1:51430059-51430078 | None:intergenic | 40.0% | |
GAGAGGTAATAGTCTTCTAC+TGG | - | chr4_1:51430060-51430079 | Msa0554180:intron | 40.0% | |
ACTTATTCCCAACCTCAACA+AGG | + | chr4_1:51430087-51430106 | None:intergenic | 40.0% | |
CGTCTCCGAGCATTAAAATT+TGG | - | chr4_1:51430247-51430266 | Msa0554180:intron | 40.0% | |
! | CTCCTCCAGATAGATTTGTT+TGG | - | chr4_1:51430405-51430424 | Msa0554180:intron | 40.0% |
! | CAGCGGTTAAGCGTATTTTT+AGG | - | chr4_1:51430455-51430474 | Msa0554180:intron | 40.0% |
GAGTTATATCAACTGGTGGA+TGG | - | chr4_1:51430499-51430518 | Msa0554180:intron | 40.0% | |
! | AAACTGATTTCGTGCAAGCT+AGG | + | chr4_1:51430685-51430704 | None:intergenic | 40.0% |
! | TTACAAGAAGAACGGTGTCG+CGG | - | chr4_1:51424004-51424023 | Msa0554180:three_prime_UTR | 45.0% |
ATTTGTCAACACTTCCTGCG+AGG | - | chr4_1:51424075-51424094 | Msa0554180:three_prime_UTR | 45.0% | |
!! | AATAATGGGTTTGGTGGTGG+AGG | - | chr4_1:51424261-51424280 | Msa0554180:intron | 45.0% |
!!! | AAGGGTTGGTCTTTTGTTGC+TGG | + | chr4_1:51424344-51424363 | None:intergenic | 45.0% |
TTGTAGTGTGCTCCTCCTTA+AGG | - | chr4_1:51424674-51424693 | Msa0554180:intron | 45.0% | |
TCAAACCCAAGACCTTAAGG+AGG | + | chr4_1:51424689-51424708 | None:intergenic | 45.0% | |
GATTCTCCCAGATGCGAATT+TGG | - | chr4_1:51424707-51424726 | Msa0554180:intron | 45.0% | |
TCCCAGATGCGAATTTGGAT+GGG | - | chr4_1:51424712-51424731 | Msa0554180:intron | 45.0% | |
! | ATTGAAGGTGTAGGTGTGTC+TGG | + | chr4_1:51424821-51424840 | None:intergenic | 45.0% |
!!! | TGGCAATAGTTTTGAGCAGG+AGG | - | chr4_1:51425284-51425303 | Msa0554180:intron | 45.0% |
!!! | TAGTTTTGAGCAGGAGGTCT+AGG | - | chr4_1:51425290-51425309 | Msa0554180:intron | 45.0% |
!!! | AGTTTTGAGCAGGAGGTCTA+GGG | - | chr4_1:51425291-51425310 | Msa0554180:CDS | 45.0% |
GTGTAGTTTCAACTGAGCAC+GGG | - | chr4_1:51425767-51425786 | Msa0554180:intron | 45.0% | |
TGTAGTTTCAACTGAGCACG+GGG | - | chr4_1:51425768-51425787 | Msa0554180:intron | 45.0% | |
ACACTCATCAGCATGCACTT+TGG | + | chr4_1:51425988-51426007 | None:intergenic | 45.0% | |
! | AGTCCACTGCACAACTTTTG+AGG | + | chr4_1:51426565-51426584 | None:intergenic | 45.0% |
TTACTTGTGAGTTCTGCCAC+TGG | - | chr4_1:51426869-51426888 | Msa0554180:CDS | 45.0% | |
GTGAATGCTGTATTGCCCAT+TGG | - | chr4_1:51426937-51426956 | Msa0554180:CDS | 45.0% | |
GTTGGTGCATGAATTCCTTG+AGG | + | chr4_1:51427000-51427019 | None:intergenic | 45.0% | |
! | AACAATGTCACAAGGAGCAC+TGG | + | chr4_1:51427157-51427176 | None:intergenic | 45.0% |
AGTGCTCCTTGTGACATTGT+TGG | - | chr4_1:51427156-51427175 | Msa0554180:intron | 45.0% | |
CTATGAAGAATTACGGGCAG+CGG | - | chr4_1:51427188-51427207 | Msa0554180:intron | 45.0% | |
CGGGGGATGGAAAAACAAAA+GGG | + | chr4_1:51427343-51427362 | None:intergenic | 45.0% | |
ACGGGGGATGGAAAAACAAA+AGG | + | chr4_1:51427344-51427363 | None:intergenic | 45.0% | |
!!! | GACGTCAGAGGCATTTTGTA+GGG | + | chr4_1:51427601-51427620 | None:intergenic | 45.0% |
!!! | AGACGTCAGAGGCATTTTGT+AGG | + | chr4_1:51427602-51427621 | None:intergenic | 45.0% |
!! | GTTTTGAGTGGCTGGTTGAA+AGG | + | chr4_1:51427671-51427690 | None:intergenic | 45.0% |
!!! | GATTGGAAGTTTTGAGTGGC+TGG | + | chr4_1:51427679-51427698 | None:intergenic | 45.0% |
!! | TTGCATTGGCTCCATTGGAT+TGG | + | chr4_1:51427696-51427715 | None:intergenic | 45.0% |
!!! | GGACCATTATTTTGAGTGGC+TGG | + | chr4_1:51427730-51427749 | None:intergenic | 45.0% |
! | AGTCTCAAGCTTTAGCCAAC+TGG | - | chr4_1:51427756-51427775 | Msa0554180:intron | 45.0% |
! | GTCTCAAGCTTTAGCCAACT+GGG | - | chr4_1:51427757-51427776 | Msa0554180:intron | 45.0% |
TGGTGTGATTGTCAAAAGGG+TGG | - | chr4_1:51428064-51428083 | Msa0554180:intron | 45.0% | |
GGTGTGATTGTCAAAAGGGT+GGG | - | chr4_1:51428065-51428084 | Msa0554180:intron | 45.0% | |
GTGTGATTGTCAAAAGGGTG+GGG | - | chr4_1:51428066-51428085 | Msa0554180:intron | 45.0% | |
TGACCTAGGTCATGAGAGTT+TGG | - | chr4_1:51428183-51428202 | Msa0554180:intron | 45.0% | |
ACACCAAACTCTCATGACCT+AGG | + | chr4_1:51428189-51428208 | None:intergenic | 45.0% | |
GATATAAGGTGGTTGAGGTG+TGG | + | chr4_1:51428382-51428401 | None:intergenic | 45.0% | |
TGCCACAGGAGCAAAACTTA+GGG | + | chr4_1:51428544-51428563 | None:intergenic | 45.0% | |
! | TTTTGCTCCTGTGGCAGTTT+TGG | - | chr4_1:51428548-51428567 | Msa0554180:intron | 45.0% |
! | TGCGTTGACCGAGTCAAAAT+TGG | - | chr4_1:51428761-51428780 | Msa0554180:intron | 45.0% |
! | GACCGAGTCAAAATTGGCTT+AGG | - | chr4_1:51428767-51428786 | Msa0554180:intron | 45.0% |
!!! | CCCCTAAGCCAATTTTGACT+CGG | + | chr4_1:51428772-51428791 | None:intergenic | 45.0% |
! | CCGAGTCAAAATTGGCTTAG+GGG | - | chr4_1:51428769-51428788 | Msa0554180:intron | 45.0% |
! | CGAGTCAAAATTGGCTTAGG+GGG | - | chr4_1:51428770-51428789 | Msa0554180:intron | 45.0% |
ATACATACCTCCACCTCCAA+TGG | + | chr4_1:51429026-51429045 | None:intergenic | 45.0% | |
GCCGAATAGATTTCCTGAGT+TGG | + | chr4_1:51429148-51429167 | None:intergenic | 45.0% | |
TCAGGAAATCTATTCGGCAG+TGG | - | chr4_1:51429150-51429169 | Msa0554180:intron | 45.0% | |
TGCTGCCTGAAACATTGTAG+TGG | + | chr4_1:51429286-51429305 | None:intergenic | 45.0% | |
CAACGGTGAAGTTTCCAAGT+AGG | + | chr4_1:51429866-51429885 | None:intergenic | 45.0% | |
GTTGCAGCACTAACTTTCTG+GGG | - | chr4_1:51429885-51429904 | Msa0554180:intron | 45.0% | |
GGACGCATTTCTGCAAGAAT+AGG | + | chr4_1:51429982-51430001 | None:intergenic | 45.0% | |
CACAGACACATTCTCCACTT+GGG | + | chr4_1:51430003-51430022 | None:intergenic | 45.0% | |
TCTTCTACTGGTCCTTGTTG+AGG | - | chr4_1:51430072-51430091 | Msa0554180:intron | 45.0% | |
TACTGGTCCTTGTTGAGGTT+GGG | - | chr4_1:51430077-51430096 | Msa0554180:intron | 45.0% | |
TGTATAGGCATGTGACACAG+CGG | - | chr4_1:51430438-51430457 | Msa0554180:intron | 45.0% | |
!!! | TTTTTTTTTTTTTTAATTGT+TGG | - | chr4_1:51425488-51425507 | Msa0554180:intron | 5.0% |
!! | ATAATAAATATAATTAGATA+GGG | + | chr4_1:51426141-51426160 | None:intergenic | 5.0% |
!! | AATAATAAATATAATTAGAT+AGG | + | chr4_1:51426142-51426161 | None:intergenic | 5.0% |
! | TTGCTGGTTGTTAGAGGCAG+AGG | + | chr4_1:51424328-51424347 | None:intergenic | 50.0% |
ATACATCGAGGCAACCCACT+TGG | - | chr4_1:51424623-51424642 | Msa0554180:intron | 50.0% | |
TACATCGAGGCAACCCACTT+GGG | - | chr4_1:51424624-51424643 | Msa0554180:intron | 50.0% | |
TGTGCTCCTCCTTAAGGTCT+TGG | - | chr4_1:51424680-51424699 | Msa0554180:intron | 50.0% | |
GTGCTCCTCCTTAAGGTCTT+GGG | - | chr4_1:51424681-51424700 | Msa0554180:intron | 50.0% | |
CTCCCAGATGCGAATTTGGA+TGG | - | chr4_1:51424711-51424730 | Msa0554180:intron | 50.0% | |
GCCCATCCAAATTCGCATCT+GGG | + | chr4_1:51424716-51424735 | None:intergenic | 50.0% | |
TCTTCATCCAAGCCCCAGAA+CGG | - | chr4_1:51425639-51425658 | Msa0554180:intron | 50.0% | |
ACAGTGTAGGTGTTTAGGCC+TGG | + | chr4_1:51425866-51425885 | None:intergenic | 50.0% | |
! | AAGGGATTAGCAAGGGCTTG+AGG | + | chr4_1:51426674-51426693 | None:intergenic | 50.0% |
GGGCAATACAGCATTCACTC+CGG | + | chr4_1:51426935-51426954 | None:intergenic | 50.0% | |
!! | TTGTTTTTCCATCCCCCGTC+TGG | - | chr4_1:51427345-51427364 | Msa0554180:intron | 50.0% |
! | TTAAGGTATCCTCCAGACGG+GGG | + | chr4_1:51427360-51427379 | None:intergenic | 50.0% |
! | CTTAAGGTATCCTCCAGACG+GGG | + | chr4_1:51427361-51427380 | None:intergenic | 50.0% |
! | GCTTAAGGTATCCTCCAGAC+GGG | + | chr4_1:51427362-51427381 | None:intergenic | 50.0% |
! | GGCTTAAGGTATCCTCCAGA+CGG | + | chr4_1:51427363-51427382 | None:intergenic | 50.0% |
ACGTTGAGAGAAGACGTCAG+AGG | + | chr4_1:51427613-51427632 | None:intergenic | 50.0% | |
!! | GGCATTTGCATTGGCTCCAT+TGG | + | chr4_1:51427701-51427720 | None:intergenic | 50.0% |
!! | CACTGAACCCTGGCTTTGAA+AGG | - | chr4_1:51427785-51427804 | Msa0554180:intron | 50.0% |
TGGTTGCATCACACCTCTAC+AGG | - | chr4_1:51427991-51428010 | Msa0554180:intron | 50.0% | |
GGTTGCATCACACCTCTACA+GGG | - | chr4_1:51427992-51428011 | Msa0554180:intron | 50.0% | |
TGGAGGGATAAGGAGGTTGT+GGG | + | chr4_1:51428350-51428369 | None:intergenic | 50.0% | |
GTATGAGTGGAGGGATAAGG+AGG | + | chr4_1:51428357-51428376 | None:intergenic | 50.0% | |
GGAGTATGAGTGGAGGGATA+AGG | + | chr4_1:51428360-51428379 | None:intergenic | 50.0% | |
! | TTGAGGTGTGGGAGTATGAG+TGG | + | chr4_1:51428370-51428389 | None:intergenic | 50.0% |
GGGGAGATATAAGGTGGTTG+AGG | + | chr4_1:51428387-51428406 | None:intergenic | 50.0% | |
CAACCACCTTATATCTCCCC+AGG | - | chr4_1:51428387-51428406 | Msa0554180:intron | 50.0% | |
AGACCTGGGGAGATATAAGG+TGG | + | chr4_1:51428393-51428412 | None:intergenic | 50.0% | |
TCGAGACCTGGGGAGATATA+AGG | + | chr4_1:51428396-51428415 | None:intergenic | 50.0% | |
CCACAGGAGCAAAACTTAGG+GGG | + | chr4_1:51428542-51428561 | None:intergenic | 50.0% | |
GCCACAGGAGCAAAACTTAG+GGG | + | chr4_1:51428543-51428562 | None:intergenic | 50.0% | |
CTGCCACAGGAGCAAAACTT+AGG | + | chr4_1:51428545-51428564 | None:intergenic | 50.0% | |
TGACCGAGTCAATTGCCCTA+GGG | + | chr4_1:51428576-51428595 | None:intergenic | 50.0% | |
TTGACCGAGTCAATTGCCCT+AGG | + | chr4_1:51428577-51428596 | None:intergenic | 50.0% | |
! | TTTTGCCCCTGTGGCAGTTT+TGG | + | chr4_1:51428796-51428815 | None:intergenic | 50.0% |
TGCCACAGGGGCAAAACTTA+GGG | - | chr4_1:51428800-51428819 | Msa0554180:intron | 50.0% | |
CTATTCGGCAGTGGAATCTC+AGG | - | chr4_1:51429159-51429178 | Msa0554180:intron | 50.0% | |
TGGAACTGGGAAGTAGAACC+TGG | + | chr4_1:51429231-51429250 | None:intergenic | 50.0% | |
AACGGGTGGTTGTTGGAACT+GGG | + | chr4_1:51429244-51429263 | None:intergenic | 50.0% | |
AGTTCCAACAACCACCCGTT+GGG | - | chr4_1:51429244-51429263 | Msa0554180:intron | 50.0% | |
! | GTGTTATTGAACCCAACGGG+TGG | + | chr4_1:51429258-51429277 | None:intergenic | 50.0% |
! | ATGCTCAAGGTCAATGGGCT+GGG | + | chr4_1:51429483-51429502 | None:intergenic | 50.0% |
AATGCTCAAGGTCAATGGGC+TGG | + | chr4_1:51429484-51429503 | None:intergenic | 50.0% | |
TTGGTAGAGATGCTGGAAGC+AGG | - | chr4_1:51429773-51429792 | Msa0554180:intron | 50.0% | |
TTGCAGAAATGCGTCCCAAG+TGG | - | chr4_1:51429986-51430005 | Msa0554180:intron | 50.0% | |
CCACAGACACATTCTCCACT+TGG | + | chr4_1:51430004-51430023 | None:intergenic | 50.0% | |
CCAAGTGGAGAATGTGTCTG+TGG | - | chr4_1:51430001-51430020 | Msa0554180:intron | 50.0% | |
GGAGAAATGGAATCCTGGAG+AGG | - | chr4_1:51430043-51430062 | Msa0554180:intron | 50.0% | |
CTACTGGTCCTTGTTGAGGT+TGG | - | chr4_1:51430076-51430095 | Msa0554180:intron | 50.0% | |
! | CTATCTGGAGGAGCTTGTTC+TGG | + | chr4_1:51430398-51430417 | None:intergenic | 50.0% |
TGGATGGGCAACGAGAAATG+AGG | - | chr4_1:51430515-51430534 | Msa0554180:CDS | 50.0% | |
ATGGGCAACGAGAAATGAGG+AGG | - | chr4_1:51430518-51430537 | Msa0554180:CDS | 50.0% | |
!! | AATGGGTTTGGTGGTGGAGG+AGG | - | chr4_1:51424264-51424283 | Msa0554180:intron | 55.0% |
ACCACGAAGCCAACCCAAGT+GGG | + | chr4_1:51424640-51424659 | None:intergenic | 55.0% | |
!! | TTGGGTTGGCTTCGTGGTGT+TGG | - | chr4_1:51424642-51424661 | Msa0554180:intron | 55.0% |
GGCCCATCCAAATTCGCATC+TGG | + | chr4_1:51424717-51424736 | None:intergenic | 55.0% | |
TCAACTGAGCACGGGGAACA+TGG | - | chr4_1:51425775-51425794 | Msa0554180:intron | 55.0% | |
GGGAGGGGAAACACAAGAGA+TGG | + | chr4_1:51426121-51426140 | None:intergenic | 55.0% | |
ATCTGGTGCTTGCAAGCCTC+AGG | + | chr4_1:51426344-51426363 | None:intergenic | 55.0% | |
! | ACTGTGAACTGACTGGCCAG+TGG | + | chr4_1:51426888-51426907 | None:intergenic | 55.0% |
ATTACGGGCAGCGGCTTATG+AGG | - | chr4_1:51427197-51427216 | Msa0554180:intron | 55.0% | |
! | TTTTTCCATCCCCCGTCTGG+AGG | - | chr4_1:51427348-51427367 | Msa0554180:intron | 55.0% |
! | GGTTCAGTGAAGCACCCAGT+TGG | + | chr4_1:51427774-51427793 | None:intergenic | 55.0% |
GTGGAGGGATAAGGAGGTTG+TGG | + | chr4_1:51428351-51428370 | None:intergenic | 55.0% | |
! | GGTGTGGGAGTATGAGTGGA+GGG | + | chr4_1:51428366-51428385 | None:intergenic | 55.0% |
! | AGGTGTGGGAGTATGAGTGG+AGG | + | chr4_1:51428367-51428386 | None:intergenic | 55.0% |
GGAAGCAAGTTCGAGACCTG+GGG | + | chr4_1:51428406-51428425 | None:intergenic | 55.0% | |
GGGAAGCAAGTTCGAGACCT+GGG | + | chr4_1:51428407-51428426 | None:intergenic | 55.0% | |
TGGGAAGCAAGTTCGAGACC+TGG | + | chr4_1:51428408-51428427 | None:intergenic | 55.0% | |
CAGGAGCAAAACTTAGGGGG+CGG | + | chr4_1:51428539-51428558 | None:intergenic | 55.0% | |
! | CCCCCTAAGTTTTGCTCCTG+TGG | - | chr4_1:51428539-51428558 | Msa0554180:intron | 55.0% |
ACCGAGTCAATTGCCCTAGG+GGG | + | chr4_1:51428574-51428593 | None:intergenic | 55.0% | |
GACCGAGTCAATTGCCCTAG+GGG | + | chr4_1:51428575-51428594 | None:intergenic | 55.0% | |
CTGCCACAGGGGCAAAACTT+AGG | - | chr4_1:51428799-51428818 | Msa0554180:intron | 55.0% | |
GCCACAGGGGCAAAACTTAG+GGG | - | chr4_1:51428801-51428820 | Msa0554180:intron | 55.0% | |
CCACAGGGGCAAAACTTAGG+GGG | - | chr4_1:51428802-51428821 | Msa0554180:intron | 55.0% | |
CCAATGGAACTAGGCTGCAC+TGG | + | chr4_1:51429010-51429029 | None:intergenic | 55.0% | |
CCAGTGCAGCCTAGTTCCAT+TGG | - | chr4_1:51429007-51429026 | Msa0554180:CDS | 55.0% | |
GTGCAGCCTAGTTCCATTGG+AGG | - | chr4_1:51429010-51429029 | Msa0554180:intron | 55.0% | |
CAGCCTAGTTCCATTGGAGG+TGG | - | chr4_1:51429013-51429032 | Msa0554180:intron | 55.0% | |
CCTCCACCTCCAATGGAACT+AGG | + | chr4_1:51429019-51429038 | None:intergenic | 55.0% | |
CCTAGTTCCATTGGAGGTGG+AGG | - | chr4_1:51429016-51429035 | Msa0554180:intron | 55.0% | |
TTCGGCAGTGGAATCTCAGG+TGG | - | chr4_1:51429162-51429181 | Msa0554180:intron | 55.0% | |
CAACCCCTTTCCTACACCAG+CGG | - | chr4_1:51429191-51429210 | Msa0554180:intron | 55.0% | |
AACCCCTTTCCTACACCAGC+GGG | - | chr4_1:51429192-51429211 | Msa0554180:intron | 55.0% | |
AACCCCGCTGGTGTAGGAAA+GGG | + | chr4_1:51429198-51429217 | None:intergenic | 55.0% | |
CAACGGGTGGTTGTTGGAAC+TGG | + | chr4_1:51429245-51429264 | None:intergenic | 55.0% | |
CAGTTCCAACAACCACCCGT+TGG | - | chr4_1:51429243-51429262 | Msa0554180:intron | 55.0% | |
TGAACCCAACGGGTGGTTGT+TGG | + | chr4_1:51429251-51429270 | None:intergenic | 55.0% | |
TAGAGATGCTGGAAGCAGGC+AGG | - | chr4_1:51429777-51429796 | Msa0554180:intron | 55.0% | |
GTCAACACTTCCTGCGAGGC+AGG | - | chr4_1:51424079-51424098 | Msa0554180:three_prime_UTR | 60.0% | |
AGAGGAATGACCTGCCTCGC+AGG | + | chr4_1:51424092-51424111 | None:intergenic | 60.0% | |
TCGAGGCAACCCACTTGGGT+TGG | - | chr4_1:51424628-51424647 | Msa0554180:intron | 60.0% | |
!! | ACCCACTTGGGTTGGCTTCG+TGG | - | chr4_1:51424636-51424655 | Msa0554180:intron | 60.0% |
CACCACGAAGCCAACCCAAG+TGG | + | chr4_1:51424641-51424660 | None:intergenic | 60.0% | |
!! | TGACGTGGAGTGCCGTTCTG+GGG | + | chr4_1:51425654-51425673 | None:intergenic | 60.0% |
!! | CTGACGTGGAGTGCCGTTCT+GGG | + | chr4_1:51425655-51425674 | None:intergenic | 60.0% |
!! | ACTGACGTGGAGTGCCGTTC+TGG | + | chr4_1:51425656-51425675 | None:intergenic | 60.0% |
CTGGGTGCTTCACTGAACCC+TGG | - | chr4_1:51427775-51427794 | Msa0554180:intron | 60.0% | |
TAGGGGGCCAAAACTGCCAC+AGG | + | chr4_1:51428786-51428805 | None:intergenic | 60.0% | |
!! | TGTGGCAGTTTTGGCCCCCT+AGG | - | chr4_1:51428557-51428576 | Msa0554180:intron | 60.0% |
!! | GTGGCAGTTTTGGCCCCCTA+GGG | - | chr4_1:51428558-51428577 | Msa0554180:intron | 60.0% |
GCCCCCTAGGGCAATTGACT+CGG | - | chr4_1:51428570-51428589 | Msa0554180:intron | 60.0% | |
!! | TGACTCGGTCAACGCACACG+TGG | + | chr4_1:51428585-51428604 | None:intergenic | 60.0% |
TAGGGGGCCAAAACTGCCAC+AGG | - | chr4_1:51428786-51428805 | Msa0554180:intron | 60.0% | |
AGGGGGCCAAAACTGCCACA+GGG | - | chr4_1:51428787-51428806 | Msa0554180:intron | 60.0% | |
! | CCCCCTAAGTTTTGCCCCTG+TGG | + | chr4_1:51428805-51428824 | None:intergenic | 60.0% |
CAGGGGCAAAACTTAGGGGG+CGG | - | chr4_1:51428805-51428824 | Msa0554180:intron | 60.0% | |
ACCCCTTTCCTACACCAGCG+GGG | - | chr4_1:51429193-51429212 | Msa0554180:intron | 60.0% | |
ACCCCGCTGGTGTAGGAAAG+GGG | + | chr4_1:51429197-51429216 | None:intergenic | 60.0% | |
CAACCCCGCTGGTGTAGGAA+AGG | + | chr4_1:51429199-51429218 | None:intergenic | 60.0% | |
CTACACCAGCGGGGTTGACA+GGG | - | chr4_1:51429202-51429221 | Msa0554180:intron | 60.0% | |
!! | GGGTTTGGTGGTGGAGGAGG+AGG | - | chr4_1:51424267-51424286 | Msa0554180:intron | 65.0% |
!! | TGGAGTGCCGTTCTGGGGCT+TGG | + | chr4_1:51425649-51425668 | None:intergenic | 65.0% |
GGTATCCTCCAGACGGGGGA+TGG | + | chr4_1:51427356-51427375 | None:intergenic | 65.0% | |
GGGGGCCAAAACTGCCACAG+GGG | - | chr4_1:51428788-51428807 | Msa0554180:intron | 65.0% | |
CCTGTCAACCCCGCTGGTGT+AGG | + | chr4_1:51429204-51429223 | None:intergenic | 65.0% | |
CCTACACCAGCGGGGTTGAC+AGG | - | chr4_1:51429201-51429220 | Msa0554180:intron | 65.0% | |
GGAAACCCTGTCAACCCCGC+TGG | + | chr4_1:51429210-51429229 | None:intergenic | 65.0% | |
GCGGGGTTGACAGGGTTTCC+AGG | - | chr4_1:51429210-51429229 | Msa0554180:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 51423830 | 51430780 | 51423830 | ID=Msa0554180;Name=Msa0554180 |
chr4_1 | mRNA | 51423830 | 51430780 | 51423830 | ID=Msa0554180-mRNA-1;Parent=Msa0554180;Name=Msa0554180-mRNA-1;_AED=0.10;_eAED=0.10;_QI=236|0.87|0.77|1|0.87|0.77|9|350|325 |
chr4_1 | exon | 51423830 | 51424218 | 51423830 | ID=Msa0554180-mRNA-1:exon:14718;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51424546 | 51424618 | 51424546 | ID=Msa0554180-mRNA-1:exon:14717;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51425291 | 51425480 | 51425291 | ID=Msa0554180-mRNA-1:exon:14716;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51425573 | 51425628 | 51425573 | ID=Msa0554180-mRNA-1:exon:14715;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51426804 | 51427075 | 51426804 | ID=Msa0554180-mRNA-1:exon:14714;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51427359 | 51427452 | 51427359 | ID=Msa0554180-mRNA-1:exon:14713;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51428184 | 51428279 | 51428184 | ID=Msa0554180-mRNA-1:exon:14712;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51428904 | 51429026 | 51428904 | ID=Msa0554180-mRNA-1:exon:14711;Parent=Msa0554180-mRNA-1 |
chr4_1 | exon | 51430510 | 51430780 | 51430510 | ID=Msa0554180-mRNA-1:exon:14710;Parent=Msa0554180-mRNA-1 |
chr4_1 | five_prime_UTR | 51430545 | 51430780 | 51430545 | ID=Msa0554180-mRNA-1:five_prime_utr;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51430510 | 51430544 | 51430510 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51428904 | 51429026 | 51428904 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51428184 | 51428279 | 51428184 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51427359 | 51427452 | 51427359 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51426804 | 51427075 | 51426804 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51425573 | 51425628 | 51425573 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51425291 | 51425480 | 51425291 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51424546 | 51424618 | 51424546 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | CDS | 51424180 | 51424218 | 51424180 | ID=Msa0554180-mRNA-1:cds;Parent=Msa0554180-mRNA-1 |
chr4_1 | three_prime_UTR | 51423830 | 51424179 | 51423830 | ID=Msa0554180-mRNA-1:three_prime_utr;Parent=Msa0554180-mRNA-1 |
Gene Sequence |
Protein sequence |