AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0005000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005000 MtrunA17_Chr1g0151761 91.975 648 25 4 1 642 1 627 0.0 1052
Msa0005000 MtrunA17_Chr3g0135621 62.593 671 156 19 1 642 1 605 0.0 628
Msa0005000 MtrunA17_Chr3g0135631 66.334 401 102 10 229 612 1 385 8.41e-134 398
Msa0005000 MtrunA17_Chr3g0135641 58.407 226 46 7 1 215 1 189 5.60e-67 218
Msa0005000 MtrunA17_Chr5g0396111 56.213 169 70 2 112 276 185 353 3.98e-57 197
Msa0005000 MtrunA17_Chr5g0396111 45.070 71 38 1 115 184 284 354 8.67e-11 64.3
Msa0005000 MtrunA17_Chr7g0217251 28.906 256 134 12 112 353 169 390 2.11e-14 76.6
Msa0005000 MtrunA17_Chr1g0197441 28.641 206 122 6 115 307 39 232 9.36e-13 70.1
Msa0005000 MtrunA17_Chr4g0049801 29.747 158 87 5 122 267 30 175 5.83e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005000 AT2G25970.1 52.782 665 195 33 1 611 1 600 1.34e-142 429
Msa0005000 AT4G10070.1 44.882 254 125 7 110 353 174 422 3.21e-54 197
Msa0005000 AT1G33680.1 36.464 543 266 25 110 618 230 727 4.86e-52 192
Msa0005000 AT5G04430.2 27.653 311 158 12 69 366 9 265 8.51e-16 79.7
Msa0005000 AT5G04430.1 29.817 218 115 8 69 279 9 195 6.63e-14 73.6

Find 278 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGGCCCACCTTGTTATT+TGG 0.118001 1_1:+7446536 None:intergenic
GTTCGTCGTACTTGCGTTTC+AGG 0.131446 1_1:+7448279 None:intergenic
ACTAATCTATTTGGAGAATT+AGG 0.181216 1_1:+7447226 None:intergenic
GGAAGGGTTGGTGTTATTAT+TGG 0.182914 1_1:-7447328 Msa0005000:CDS
ATGTAAACTTGCTAAATATT+TGG 0.204121 1_1:-7441740 Msa0005000:three_prime_UTR
GTAAGCTCAACTAATCTATT+TGG 0.259507 1_1:+7447217 None:intergenic
AGGAGGACCGTTGTCGAATT+TGG 0.260354 1_1:+7448082 None:intergenic
CTTTCAGTGGATGTGTCGCC+TGG 0.292557 1_1:+7446102 None:intergenic
CTTGTTATTTGGAATCTTCA+TGG 0.296247 1_1:+7446547 None:intergenic
GCTCTTTGAGAGCCTGCTTC+TGG 0.301980 1_1:+7442152 None:intergenic
AATAGATTAGTTGAGCTTAC+TGG 0.304836 1_1:-7447214 Msa0005000:CDS
TCAGCCATTGGAACTGGAAT+TGG 0.310054 1_1:+7448332 None:intergenic
TACAACTGGAGCAAGAATTC+AGG 0.310281 1_1:-7446368 Msa0005000:intron
AAATCAGCGGTGGCGGGAGG+GGG 0.314498 1_1:+7448188 None:intergenic
CCTAATGCTGCTGGAGGTTA+TGG 0.319168 1_1:-7442224 Msa0005000:CDS
GGTGGATAGTTGGCAGCATT+TGG 0.321788 1_1:+7442392 None:intergenic
AATCCAAGTTACCCGTGATA+TGG 0.322309 1_1:-7447257 Msa0005000:CDS
ATCCATAGTTGGTGGTAGTT+TGG 0.325878 1_1:+7442489 None:intergenic
GAAATCAGCGGTGGCGGGAG+GGG 0.335247 1_1:+7448187 None:intergenic
GCCTGCTGAGCTCCCTGTGC+AGG 0.353119 1_1:+7441945 None:intergenic
AAGCTCGGCCACCCTCTAGC+TGG 0.354172 1_1:-7442937 Msa0005000:CDS
GGCCAAACTACCACCAACTA+TGG 0.354270 1_1:-7442491 Msa0005000:CDS
TTGAGAGCCTGCTTCTGGTT+GGG 0.355943 1_1:+7442157 None:intergenic
ATAACACCAACCCTTCCATT+AGG 0.362493 1_1:+7447334 None:intergenic
CATCCATATCACGGGTAACT+TGG 0.363155 1_1:+7447254 None:intergenic
TCTTGAGCTGACCCATAGCT+TGG 0.369291 1_1:+7442515 None:intergenic
TCTCAAAGAGCACCACCTTC+TGG 0.375855 1_1:-7442140 Msa0005000:CDS
CCTCAAACACAGTCTGGTTA+TGG 0.378826 1_1:-7442305 Msa0005000:CDS
TAACACCAACCCTTCCATTA+GGG 0.380545 1_1:+7447335 None:intergenic
CTTGCTGAGGCACATTGTAC+TGG 0.386367 1_1:+7442843 None:intergenic
CTGGTGGATATTCTACCAAT+TGG 0.388293 1_1:-7442793 Msa0005000:CDS
GTCCCATCAGCTGGAGGTGC+AGG 0.392215 1_1:+7442689 None:intergenic
CAGCATTTGGGCTAGGCTGT+TGG 0.392417 1_1:+7442405 None:intergenic
TATGATCAGCAGCAAATCTA+TGG 0.393101 1_1:-7442545 Msa0005000:CDS
CTTGAGCTGACCCATAGCTT+GGG 0.393959 1_1:+7442516 None:intergenic
GGGGCTGCTCAGCCAAGTTA+TGG 0.394510 1_1:-7442365 Msa0005000:CDS
ATCCGCTGGTTATAACCAAC+CGG 0.399371 1_1:-7442642 Msa0005000:CDS
GCTTCTCAACAACCTGGTTA+TGG 0.399715 1_1:-7442902 Msa0005000:CDS
CCATATGCTGCTTGGGAGGT+TGG 0.401024 1_1:+7442335 None:intergenic
TGCGTCTGTGTCACGTGTTT+TGG 0.401283 1_1:+7448415 None:intergenic
CAATCTCAAAGTTGCAAAGC+TGG 0.401440 1_1:+7441821 None:intergenic
AATTGAATCTGCAAAACAAT+TGG 0.402759 1_1:-7446049 Msa0005000:CDS
CCATAACCTCCAGCAGCATT+AGG 0.408998 1_1:+7442224 None:intergenic
AGAGCACCACCTTCTGGTTA+TGG 0.409292 1_1:-7442134 Msa0005000:CDS
ACCTGCACAGGGAGCTCAGC+AGG 0.412517 1_1:-7441946 Msa0005000:CDS
ACCACCAACTATGGATCAAA+AGG 0.413986 1_1:-7442482 Msa0005000:CDS
CAGGCTGAGTCTGGAGGTAA+TGG 0.416113 1_1:-7446617 Msa0005000:CDS
GAAGAAACCCTAGCTGTAGC+TGG 0.416806 1_1:+7448373 None:intergenic
TTGGCTGCCATATGCTGCTT+GGG 0.417515 1_1:+7442328 None:intergenic
AAGAGTATGCAAGCTACAAC+TGG 0.418295 1_1:-7446382 Msa0005000:CDS
GCTGGGCAGTTGCAGTGGAC+TGG 0.419977 1_1:+7442768 None:intergenic
CCAACCTCCCAAGCAGCATA+TGG 0.421508 1_1:-7442335 Msa0005000:CDS
TATCAACAACCACCACAATC+AGG 0.423047 1_1:-7442587 Msa0005000:CDS
AGGAGGTCCGTCGGAGAAAC+CGG 0.425705 1_1:+7448232 None:intergenic
GTTGGTGTTATTATTGGAAA+AGG 0.426073 1_1:-7447322 Msa0005000:CDS
GGGCTGCTCAGCCAAGTTAT+GGG 0.426222 1_1:-7442364 Msa0005000:CDS
AATCAGCGGTGGCGGGAGGG+GGG 0.427004 1_1:+7448189 None:intergenic
GGTCCTGCACCTCCAGCTGA+TGG 0.427874 1_1:-7442692 Msa0005000:CDS
GTCGCCGCTCGTCTCCTCTC+TGG 0.429663 1_1:-7448137 Msa0005000:CDS
GGTTATGGTCCTCCATCATA+TGG 0.431553 1_1:-7442119 Msa0005000:CDS
CTTGTTACTCGACGAATGAC+TGG 0.434663 1_1:-7446593 Msa0005000:CDS
AAGGTTGGACAGGTGGAACT+TGG 0.436476 1_1:+7442450 None:intergenic
GTGGATAGTTGGCAGCATTT+GGG 0.441115 1_1:+7442393 None:intergenic
GCAGGCGGTCAACCTGGTTA+TGG 0.441342 1_1:-7442074 Msa0005000:CDS
GAGTAACCACCGGACATTGA+TGG 0.441729 1_1:+7442974 None:intergenic
TTCGTCGTACTTGCGTTTCA+GGG 0.443304 1_1:+7448280 None:intergenic
AGCTAGAGGGTGGCCGAGCT+TGG 0.443328 1_1:+7442939 None:intergenic
AGCTCGGCCACCCTCTAGCT+GGG 0.447088 1_1:-7442936 Msa0005000:CDS
CCATAACCAGACTGTGTTTG+AGG 0.447473 1_1:+7442305 None:intergenic
GATTCGTCAGCCATTGGAAC+TGG 0.447562 1_1:+7448326 None:intergenic
CTACAGGTTGGTCTTATAAT+CGG 0.447978 1_1:-7446424 Msa0005000:intron
CCGTCATATGGTGCTCCTGC+AGG 0.448573 1_1:-7442092 Msa0005000:CDS
GGTGTTATTATTGGAAAAGG+TGG 0.450115 1_1:-7447319 Msa0005000:CDS
AAGAAGATTGAAATCCCTAA+TGG 0.454062 1_1:-7447349 Msa0005000:CDS
GTTGGCTGCCATATGCTGCT+TGG 0.454556 1_1:+7442327 None:intergenic
GAGTTCGAAATCAGCGGTGG+CGG 0.458495 1_1:+7448181 None:intergenic
CTCCCTCTGATGTCGTCAAA+CGG 0.458508 1_1:-7448106 Msa0005000:CDS
TCGTACTTGCGTTTCAGGGA+AGG 0.461758 1_1:+7448284 None:intergenic
TTTGAGAGCCTGCTTCTGGT+TGG 0.462877 1_1:+7442156 None:intergenic
ATTGGAACTGGAATTGGAAT+CGG 0.465357 1_1:+7448338 None:intergenic
TCATATGGTCCTCCGTCATA+TGG 0.465714 1_1:-7442104 Msa0005000:CDS
AAGTATCTTCAGTTGCAATC+TGG 0.466830 1_1:-7447286 Msa0005000:CDS
CAACCTTCACAACAAGGTTA+TGG 0.467298 1_1:-7442434 Msa0005000:CDS
CTCAGCAAGGTTACCAAGCT+CGG 0.468815 1_1:-7442952 Msa0005000:CDS
CCTTCCCCTTACGATTCATC+AGG 0.470277 1_1:-7448062 Msa0005000:intron
CGAAATCAGCGGTGGCGGGA+GGG 0.470982 1_1:+7448186 None:intergenic
GGTTATCCTCCCCACTCAGC+TGG 0.471437 1_1:-7442812 Msa0005000:CDS
GTCCTGCACCTCCAGCTGAT+GGG 0.471850 1_1:-7442691 Msa0005000:CDS
CTAGCTGTAGCTGGGGATAG+AGG 0.475104 1_1:+7448382 None:intergenic
CAGGCACCACATGGTTCCTA+TGG 0.475333 1_1:-7442050 Msa0005000:CDS
TAGTTGGCAGCATTTGGGCT+AGG 0.476978 1_1:+7442398 None:intergenic
AGCCCCTTGTGGTGGATAGT+TGG 0.478569 1_1:+7442382 None:intergenic
GCTCCTGCAGGCGGTCAACC+TGG 0.480776 1_1:-7442080 Msa0005000:CDS
GCTGGAGGTTATGGTCAACC+TGG 0.480952 1_1:-7442215 Msa0005000:CDS
CCACATGGTTCCTATGGTGC+TGG 0.481020 1_1:-7442044 Msa0005000:CDS
CATAACCTTGTTGTGAAGGT+TGG 0.482142 1_1:+7442435 None:intergenic
TGCAGTGGACTGGTCCCAAT+TGG 0.482391 1_1:+7442778 None:intergenic
TATGGCTCAGCCCCAAGCTA+TGG 0.483146 1_1:-7442527 Msa0005000:CDS
GCCCGTGGTGGTAGCTATGA+TGG 0.484526 1_1:-7441972 Msa0005000:CDS
TGGTTATAACCAACCGGGGC+AGG 0.484946 1_1:-7442636 Msa0005000:CDS
TATTGCGATTCGTCAGCCAT+TGG 0.486803 1_1:+7448320 None:intergenic
TTTCAGTGGATGTGTCGCCT+GGG 0.488134 1_1:+7446103 None:intergenic
TGCTGCTGATCATATGATGT+TGG 0.488312 1_1:+7442554 None:intergenic
AGAATATCCACCAGCTGAGT+GGG 0.492850 1_1:+7442802 None:intergenic
CTATGATGGAGCACCTGCAC+AGG 0.493101 1_1:-7441958 Msa0005000:CDS
CTATGGTGCTGGTTATCCTC+AGG 0.495560 1_1:-7442033 Msa0005000:CDS
TGGTGGATATTCTACCAATT+GGG 0.499810 1_1:-7442792 Msa0005000:CDS
GTTGCAAAGCTGGGTAGGTA+AGG 0.500397 1_1:+7441831 None:intergenic
TCGAAATCAGCGGTGGCGGG+AGG 0.502438 1_1:+7448185 None:intergenic
TACCATCAGCAGAATATGCT+GGG 0.503201 1_1:+7442009 None:intergenic
CCACCAACTATGGATCAAAA+GGG 0.503822 1_1:-7442481 Msa0005000:CDS
CCTCAGCAACAGCAGAATCC+TGG 0.504044 1_1:-7442716 Msa0005000:CDS
AATAATCATAGGTAGACTGC+TGG 0.504119 1_1:+7442750 None:intergenic
GGCACATTGTACTGGGAAGT+TGG 0.504619 1_1:+7442851 None:intergenic
CGGTCAACCTGGTTATGGTC+AGG 0.506940 1_1:-7442069 Msa0005000:CDS
CTGTTGATTATAATAATCAT+AGG 0.509838 1_1:+7442739 None:intergenic
TTGTACTGGGAAGTTGGACC+AGG 0.509939 1_1:+7442857 None:intergenic
AGCCAACCTCAAACACAGTC+TGG 0.515940 1_1:-7442311 Msa0005000:CDS
TAGAATATCCACCAGCTGAG+TGG 0.517553 1_1:+7442801 None:intergenic
TCACAGTCACCTAATGCTGC+TGG 0.518137 1_1:-7442233 Msa0005000:CDS
AGTTCGAAATCAGCGGTGGC+GGG 0.519442 1_1:+7448182 None:intergenic
ACCGGGGCAGGTATATTCTC+AGG 0.519963 1_1:-7442624 Msa0005000:CDS
GACTGTGATTGTCCGTATGC+AGG 0.520554 1_1:+7442248 None:intergenic
CCAGGATTCTGCTGTTGCTG+AGG 0.520990 1_1:+7442716 None:intergenic
TTGTAAGCAGTCCCATCAGC+TGG 0.522053 1_1:+7442680 None:intergenic
TTCAGTGGATGTGTCGCCTG+GGG 0.528218 1_1:+7446104 None:intergenic
AAGAAACCCTAGCTGTAGCT+GGG 0.528278 1_1:+7448374 None:intergenic
TGCAGATTCAATTTGTTCAG+AGG 0.529509 1_1:+7446059 None:intergenic
TCCTGAGAATATACCTGCCC+CGG 0.531982 1_1:+7442623 None:intergenic
CCTCCTCACTCACGAACCAC+CGG 0.532065 1_1:-7448251 Msa0005000:CDS
GTTGGACCAGGGTATGCTCC+AGG 0.533306 1_1:+7442869 None:intergenic
ATGGCTCAGCCCCAAGCTAT+GGG 0.534329 1_1:-7442526 Msa0005000:CDS
CCAGGTTGTTGAGAAGCGGC+AGG 0.535004 1_1:+7442908 None:intergenic
GAATACGAAGGTATACTCAT+AGG 0.536049 1_1:+7447388 None:intergenic
GGATATTCCCAACCAGAAGC+AGG 0.537520 1_1:-7442164 Msa0005000:CDS
AGTGGTACTCCGCCTGCATA+CGG 0.538474 1_1:-7442260 Msa0005000:CDS
CTCTATCCCCAGCTACAGCT+AGG 0.539526 1_1:-7448381 Msa0005000:five_prime_UTR
TTACCATCAGCAGAATATGC+TGG 0.541168 1_1:+7442008 None:intergenic
CTTAGAAATCCATCAATGTC+CGG 0.541667 1_1:-7442983 Msa0005000:CDS
GGCTGAGCAGCCCCTTGTGG+TGG 0.542062 1_1:+7442374 None:intergenic
GGCTGGGAAGGAGGATACCC+AGG 0.542313 1_1:+7442197 None:intergenic
GGTTATGGCTATGCACAGCC+TGG 0.542437 1_1:-7442887 Msa0005000:CDS
ATACCTTCGTATTCGCATCA+AGG 0.542939 1_1:-7447379 Msa0005000:CDS
TAACCAGGTTGACCGCCTGC+AGG 0.543015 1_1:+7442077 None:intergenic
GCTGGAGGTGCAGGACCACC+AGG 0.543305 1_1:+7442698 None:intergenic
GTGCCTCAGCAAGCTTATGC+AGG 0.543329 1_1:-7442833 Msa0005000:CDS
AAGCTATGGGTCAGCTCAAG+AGG 0.543556 1_1:-7442513 Msa0005000:CDS
GTTGGTCTTATAATCGGTAA+AGG 0.545344 1_1:-7446418 Msa0005000:CDS
TATGCTGCTTGGGAGGTTGG+CGG 0.549360 1_1:+7442338 None:intergenic
AGGTTGTTGAGAAGCGGCAG+GGG 0.550505 1_1:+7442910 None:intergenic
AATCTCAAAGTTGCAAAGCT+GGG 0.550828 1_1:+7441822 None:intergenic
CCTTGTTGTGAAGGTTGGAC+AGG 0.552316 1_1:+7442440 None:intergenic
TTGCTGAGGCACATTGTACT+GGG 0.553886 1_1:+7442844 None:intergenic
TACTCGACGAATGACTGGAC+AGG 0.554297 1_1:-7446588 Msa0005000:CDS
AGACTGCTGGGCAGTTGCAG+TGG 0.556554 1_1:+7442763 None:intergenic
CATGAAGATTCCAAATAACA+AGG 0.558461 1_1:-7446546 Msa0005000:intron
GTATATTCTCAGGATGGCTA+TGG 0.559901 1_1:-7442614 Msa0005000:CDS
CTACCATAACCTTGTTGTGA+AGG 0.561165 1_1:+7442431 None:intergenic
CTGAGGATAACCAGCACCAT+AGG 0.562921 1_1:+7442034 None:intergenic
TAGGATCAGCATCCATATCA+CGG 0.563712 1_1:+7447245 None:intergenic
GAAATCCCTAATGGAAGGGT+TGG 0.564633 1_1:-7447340 Msa0005000:CDS
CACTGACCTGATGAATCGTA+AGG 0.565644 1_1:+7448056 None:intergenic
AAACCGGTGGTTCGTGAGTG+AGG 0.566199 1_1:+7448248 None:intergenic
GGGACGTTGTTGTAAGAAGG+AGG 0.568413 1_1:+7448209 None:intergenic
CAGGTTGTTGAGAAGCGGCA+GGG 0.569198 1_1:+7442909 None:intergenic
TCAAAGTTGCAAAGCTGGGT+AGG 0.569258 1_1:+7441826 None:intergenic
GCCCCAGCATATTCTGCTGA+TGG 0.569348 1_1:-7442011 Msa0005000:CDS
TACAATCAACCACCATCCGC+TGG 0.570184 1_1:-7442656 Msa0005000:CDS
AGAAGGAGGAGGAGGTCCGT+CGG 0.571000 1_1:+7448223 None:intergenic
GTGGTTCGTGAGTGAGGAGG+TGG 0.571087 1_1:+7448254 None:intergenic
GTCCGTTTGACGACATCAGA+GGG 0.572785 1_1:+7448104 None:intergenic
GGCTGTGCATAGCCATAACC+AGG 0.572820 1_1:+7442890 None:intergenic
GAACAAATCTGATAGGAGGT+TGG 0.572931 1_1:-7441696 Msa0005000:three_prime_UTR
CCCCGGTTGGTTATAACCAG+CGG 0.574388 1_1:+7442640 None:intergenic
GTTGGCGGTACCCCATAACT+TGG 0.574628 1_1:+7442353 None:intergenic
CGAACCACCGGTTTCTCCGA+CGG 0.574726 1_1:-7448239 Msa0005000:CDS
TATCCTCCCCACTCAGCTGG+TGG 0.575900 1_1:-7442809 Msa0005000:CDS
TCCATCATAGCTACCACCAC+GGG 0.578817 1_1:+7441971 None:intergenic
GATTCCAATTCCAGTTCCAA+TGG 0.580610 1_1:-7448336 Msa0005000:exon
TGGTTATAACCAGCGGATGG+TGG 0.581931 1_1:+7442647 None:intergenic
GCAGAATATGCTGGGGCCTG+AGG 0.582180 1_1:+7442017 None:intergenic
TCCGCTGGTTATAACCAACC+GGG 0.583200 1_1:-7442641 Msa0005000:CDS
TACCTTCGTATTCGCATCAA+GGG 0.584599 1_1:-7447378 Msa0005000:CDS
TACTTGCGTTTCAGGGAAGG+TGG 0.584666 1_1:+7448287 None:intergenic
TTGAGCTGACCCATAGCTTG+GGG 0.586253 1_1:+7442517 None:intergenic
CCTGTCCAACCTTCACAACA+AGG 0.586296 1_1:-7442440 Msa0005000:CDS
AGGTTGGACAGGTGGAACTT+GGG 0.587507 1_1:+7442451 None:intergenic
GCTGCCATATGCTGCTTGGG+AGG 0.588178 1_1:+7442331 None:intergenic
AGGATCAGCATCCATATCAC+GGG 0.589305 1_1:+7447246 None:intergenic
AGATTGAAATCCCTAATGGA+AGG 0.590386 1_1:-7447345 Msa0005000:CDS
CTTGGCTGAGCAGCCCCTTG+TGG 0.595602 1_1:+7442371 None:intergenic
GGCTGAGCATACCCTGATTG+TGG 0.596057 1_1:+7442575 None:intergenic
TGGGAATATCCAGAAGGAGG+GGG 0.597039 1_1:+7442176 None:intergenic
GAAATAAACTAATTTAACAC+AGG 0.597862 1_1:+7441790 None:intergenic
TATGACGGAGGACCATATGA+TGG 0.597938 1_1:+7442107 None:intergenic
GAGAATATACCTGCCCCGGT+TGG 0.599934 1_1:+7442627 None:intergenic
TATGCAGGCGGAGTACCACT+TGG 0.600643 1_1:+7442263 None:intergenic
TCTATCCCCAGCTACAGCTA+GGG 0.602297 1_1:-7448380 Msa0005000:five_prime_UTR
CCTGCAGGAGCACCATATGA+CGG 0.602443 1_1:+7442092 None:intergenic
TTGTTGTAAGAAGGAGGAGG+AGG 0.606553 1_1:+7448215 None:intergenic
AACCAGACTGTGTTTGAGGT+TGG 0.607137 1_1:+7442309 None:intergenic
AATGGAACAAATCTGATAGG+AGG 0.607935 1_1:-7441700 Msa0005000:three_prime_UTR
CCTGATGAATCGTAAGGGGA+AGG 0.609958 1_1:+7448062 None:intergenic
GGTCCGTTTGACGACATCAG+AGG 0.610197 1_1:+7448103 None:intergenic
ATCAACAACCACCACAATCA+GGG 0.610790 1_1:-7442586 Msa0005000:CDS
ATAATCATAGGTAGACTGCT+GGG 0.611439 1_1:+7442751 None:intergenic
GATTGAAATCCCTAATGGAA+GGG 0.612326 1_1:-7447344 Msa0005000:CDS
TTTGATGAGTTCGAAATCAG+CGG 0.613457 1_1:+7448175 None:intergenic
CTGGAGGTTATGGTCAACCT+GGG 0.614290 1_1:-7442214 Msa0005000:CDS
CCTGCCGCTTCTCAACAACC+TGG 0.615048 1_1:-7442908 Msa0005000:CDS
GTTGGGAATATCCAGAAGGA+GGG 0.618770 1_1:+7442174 None:intergenic
AGGGAGCAGCGGCACCAGAG+AGG 0.621571 1_1:+7448123 None:intergenic
TCATATGGTGCTCCTGCAGG+CGG 0.623705 1_1:-7442089 Msa0005000:CDS
TATGATGGAGCACCTGCACA+GGG 0.625096 1_1:-7441957 Msa0005000:CDS
TGTTGTGAAGGTTGGACAGG+TGG 0.625828 1_1:+7442443 None:intergenic
TGCCAACTATCCACCACAAG+GGG 0.627557 1_1:-7442384 Msa0005000:CDS
GGCTGCTCAGCCAAGTTATG+GGG 0.628058 1_1:-7442363 Msa0005000:CDS
ACGTTGTTGTAAGAAGGAGG+AGG 0.630187 1_1:+7448212 None:intergenic
ACTGACCTGATGAATCGTAA+GGG 0.631319 1_1:+7448057 None:intergenic
ATAACCAGGTTGTTGAGAAG+CGG 0.633923 1_1:+7442904 None:intergenic
GCACAGCCTGGAGCATACCC+TGG 0.637236 1_1:-7442875 Msa0005000:CDS
TCTGCTGATGGTAATGCAAG+TGG 0.639056 1_1:-7441999 Msa0005000:CDS
CATCAATGAAGTTCTTGCTG+AGG 0.639266 1_1:-7447158 Msa0005000:intron
GGTTGTTGAGAAGCGGCAGG+GGG 0.640268 1_1:+7442911 None:intergenic
GATGAATCGTAAGGGGAAGG+AGG 0.641309 1_1:+7448065 None:intergenic
CACCAACTATGGATCAAAAG+GGG 0.641638 1_1:-7442480 Msa0005000:CDS
GGTCTTATAATCGGTAAAGG+TGG 0.641992 1_1:-7446415 Msa0005000:CDS
GACGACATCAGAGGGAGCAG+CGG 0.642009 1_1:+7448112 None:intergenic
GGTTGGGAATATCCAGAAGG+AGG 0.643058 1_1:+7442173 None:intergenic
TCCGGTGGTTACTCTCAGCA+AGG 0.644168 1_1:-7442965 Msa0005000:CDS
CTGACCTGATGAATCGTAAG+GGG 0.646597 1_1:+7448058 None:intergenic
GGTTATGGTCAGGCACCACA+TGG 0.648967 1_1:-7442059 Msa0005000:CDS
AGCTATGGGTCAGCTCAAGA+GGG 0.656317 1_1:-7442512 Msa0005000:CDS
AGGTCCGTCGGAGAAACCGG+TGG 0.656677 1_1:+7448235 None:intergenic
TATCCACCAGCTGAGTGGGG+AGG 0.656693 1_1:+7442806 None:intergenic
AGAAACCCTAGCTGTAGCTG+GGG 0.657419 1_1:+7448375 None:intergenic
GATGAGTTCGAAATCAGCGG+TGG 0.658474 1_1:+7448178 None:intergenic
GGCACCAGAGAGGAGACGAG+CGG 0.659053 1_1:+7448133 None:intergenic
GGTTGGTTATAACCAGCGGA+TGG 0.660203 1_1:+7442644 None:intergenic
TGATTCAATCCTCAGTGGCG+AGG 0.661659 1_1:-7446025 Msa0005000:intron
TCAGTGGATGTGTCGCCTGG+GGG 0.664235 1_1:+7446105 None:intergenic
TAACCTGCATAAGCTTGCTG+AGG 0.668745 1_1:+7442830 None:intergenic
TGAGCATACCCTGATTGTGG+TGG 0.669029 1_1:+7442578 None:intergenic
GATGGAGGACCATAACCAGA+AGG 0.670007 1_1:+7442125 None:intergenic
TAAGCAGTCCCATCAGCTGG+AGG 0.671420 1_1:+7442683 None:intergenic
ACCTTGCTGAGAGTAACCAC+CGG 0.672988 1_1:+7442964 None:intergenic
GGGCAGGTATATTCTCAGGA+TGG 0.673213 1_1:-7442620 Msa0005000:CDS
CTGCCAACTATCCACCACAA+GGG 0.674671 1_1:-7442385 Msa0005000:CDS
CTCCATCATAGCTACCACCA+CGG 0.675902 1_1:+7441970 None:intergenic
GACCCTTGATGCGAATACGA+AGG 0.677168 1_1:+7447376 None:intergenic
GACGGAGGACCATATGATGG+AGG 0.678171 1_1:+7442110 None:intergenic
AAATAAACTAATTTAACACA+GGG 0.678781 1_1:+7441791 None:intergenic
GAATATCCACCAGCTGAGTG+GGG 0.679261 1_1:+7442803 None:intergenic
TCTGGTTGGGAATATCCAGA+AGG 0.680022 1_1:+7442170 None:intergenic
CTGCTGATGGTAATGCAAGT+GGG 0.680991 1_1:-7441998 Msa0005000:CDS
ACTCGACGAATGACTGGACA+GGG 0.681409 1_1:-7446587 Msa0005000:CDS
AGAAATCCATCAATGTCCGG+TGG 0.682404 1_1:-7442980 Msa0005000:CDS
TTGGGAATATCCAGAAGGAG+GGG 0.684340 1_1:+7442175 None:intergenic
TGTGATTGTCCGTATGCAGG+CGG 0.684703 1_1:+7442251 None:intergenic
CAGTCACCTAATGCTGCTGG+AGG 0.687355 1_1:-7442230 Msa0005000:CDS
GGAGGACCATAACCAGAAGG+TGG 0.687831 1_1:+7442128 None:intergenic
TGTGGTGCCTGACCATAACC+AGG 0.688833 1_1:+7442062 None:intergenic
GCTGCCAACTATCCACCACA+AGG 0.689795 1_1:-7442386 Msa0005000:CDS
TTGGTTGATTCAATCCTCAG+TGG 0.689871 1_1:-7446030 Msa0005000:CDS
CCTCAAACTCAAAAGCCAAG+TGG 0.690391 1_1:-7442278 Msa0005000:CDS
ACCATCAGCAGAATATGCTG+GGG 0.694973 1_1:+7442010 None:intergenic
CCGCTGGTTATAACCAACCG+GGG 0.703478 1_1:-7442640 Msa0005000:CDS
CAGCAACAGCAGAATCCTGG+TGG 0.703625 1_1:-7442713 Msa0005000:CDS
ATATTAGTACATCAGCTCTG+AGG 0.707129 1_1:+7441906 None:intergenic
CCGGTGGTTCGTGAGTGAGG+AGG 0.707715 1_1:+7448251 None:intergenic
AAACGGACCAAATTCGACAA+CGG 0.710424 1_1:-7448089 Msa0005000:CDS
AATGCAAGTGGGAATGCCCG+TGG 0.712985 1_1:-7441987 Msa0005000:CDS
TGTACTGGGAAGTTGGACCA+GGG 0.721480 1_1:+7442858 None:intergenic
CGACGAATGACTGGACAGGG+TGG 0.727236 1_1:-7446584 Msa0005000:CDS
GCAGGAGCACCATATGACGG+AGG 0.739248 1_1:+7442095 None:intergenic
CAAAACATACCTCGCCACTG+AGG 0.741645 1_1:+7446016 None:intergenic
GCAAGTGGGAATGCCCGTGG+TGG 0.753231 1_1:-7441984 Msa0005000:CDS
CCAGCACCATAGGAACCATG+TGG 0.763459 1_1:+7442044 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGTTAATCTTATTATT+TGG - chr1_1:7442628-7442647 Msa0005000:CDS 10.0%
!! TATAAATAACACAATATTAA+GGG + chr1_1:7446969-7446988 None:intergenic 10.0%
!! ATATAAATAACACAATATTA+AGG + chr1_1:7446970-7446989 None:intergenic 10.0%
!!! TCCTAATTTTACTTAATTTT+AGG - chr1_1:7442098-7442117 Msa0005000:CDS 15.0%
!! ACCTAAAATTAAGTAAAATT+AGG + chr1_1:7442102-7442121 None:intergenic 15.0%
!!! AATTTCGATTATTTGATAAT+TGG - chr1_1:7442660-7442679 Msa0005000:CDS 15.0%
!!! TAGAAAATTTAAAATCTCTT+AGG - chr1_1:7443034-7443053 Msa0005000:intron 15.0%
!!! AGAAAATTTAAAATCTCTTA+GGG - chr1_1:7443035-7443054 Msa0005000:intron 15.0%
!! TTGTATGTGAATATTTAATT+TGG - chr1_1:7443219-7443238 Msa0005000:intron 15.0%
!! AAAGAACATTAAAAATTGAA+GGG - chr1_1:7444019-7444038 Msa0005000:intron 15.0%
!! TAATCATTATTTATGTTAGA+TGG - chr1_1:7444234-7444253 Msa0005000:intron 15.0%
!! ATTTATGTAAATGTGATTTA+GGG - chr1_1:7444751-7444770 Msa0005000:intron 15.0%
!!! GTATCATAGTTATATTATTT+TGG - chr1_1:7444865-7444884 Msa0005000:intron 15.0%
!!! AAGATAATTTTGATAAACTT+AGG + chr1_1:7444897-7444916 None:intergenic 15.0%
!! TTATTATTGAAACAATTGTA+CGG - chr1_1:7445265-7445284 Msa0005000:intron 15.0%
!! CTTAATAATAATATATGGAA+GGG + chr1_1:7445571-7445590 None:intergenic 15.0%
!! ACTTAATAATAATATATGGA+AGG + chr1_1:7445572-7445591 None:intergenic 15.0%
!! AGGAACTTAATAATAATATA+TGG + chr1_1:7445576-7445595 None:intergenic 15.0%
!! AAATAAACTAATTTAACACA+GGG + chr1_1:7448314-7448333 None:intergenic 15.0%
!! TAATTGAATTGTGATAAAAG+AGG + chr1_1:7442077-7442096 None:intergenic 20.0%
!!! TGATTTTAATAGAGTCTATT+TGG - chr1_1:7442129-7442148 Msa0005000:CDS 20.0%
!!! ATTTTGGAGTGATTTATATT+TGG + chr1_1:7442339-7442358 None:intergenic 20.0%
!! AAGAGTCTATAGATAAAATA+GGG + chr1_1:7442972-7442991 None:intergenic 20.0%
!! AAAGAGTCTATAGATAAAAT+AGG + chr1_1:7442973-7442992 None:intergenic 20.0%
!!! AGTATGGATTTGAAATATAT+AGG - chr1_1:7443332-7443351 Msa0005000:intron 20.0%
!!! TTTAATGAATCAGTTTCTTT+TGG - chr1_1:7443442-7443461 Msa0005000:intron 20.0%
!!! TTAATGAATCAGTTTCTTTT+GGG - chr1_1:7443443-7443462 Msa0005000:intron 20.0%
!!! ACTCAATTTTTCTTCTTTTT+TGG - chr1_1:7443634-7443653 Msa0005000:intron 20.0%
!!! AATTTTTCTTCTTTTTTGGT+TGG - chr1_1:7443638-7443657 Msa0005000:intron 20.0%
!! GTGGTTATTATTAATGTTAT+TGG - chr1_1:7443832-7443851 Msa0005000:intron 20.0%
!! TGTGAACAACAATAATATAA+GGG + chr1_1:7443934-7443953 None:intergenic 20.0%
!! TTGTGAACAACAATAATATA+AGG + chr1_1:7443935-7443954 None:intergenic 20.0%
!!! AATTTTTAATGTTCTTTCAG+TGG + chr1_1:7444016-7444035 None:intergenic 20.0%
!! GAAAGAACATTAAAAATTGA+AGG - chr1_1:7444018-7444037 Msa0005000:intron 20.0%
!!! TTAGTTCTTACTAATTGATT+TGG - chr1_1:7444558-7444577 Msa0005000:intron 20.0%
!!! TAGTTCTTACTAATTGATTT+GGG - chr1_1:7444559-7444578 Msa0005000:intron 20.0%
!! GAAAACAAGTTTGTAATAAA+AGG + chr1_1:7444591-7444610 None:intergenic 20.0%
!! ATCACATTTACATAAATCAA+AGG + chr1_1:7444748-7444767 None:intergenic 20.0%
!! GATTTATGTAAATGTGATTT+AGG - chr1_1:7444750-7444769 Msa0005000:intron 20.0%
!! ATGTATTCATAGAATTGATT+CGG - chr1_1:7445000-7445019 Msa0005000:intron 20.0%
!! ATGTATTCATAGAATTGATT+CGG - chr1_1:7445000-7445019 Msa0005000:intron 20.0%
!! TTCATTGTTGGAAATATTTA+TGG - chr1_1:7446008-7446027 Msa0005000:intron 20.0%
!! ATTTCTGCTGTTAAATTATT+AGG - chr1_1:7446164-7446183 Msa0005000:intron 20.0%
!!! ATTAACTCTAATATTTGTTG+CGG - chr1_1:7446302-7446321 Msa0005000:intron 20.0%
!!! TTTATACGTACTTTTATTTG+AGG - chr1_1:7446404-7446423 Msa0005000:CDS 20.0%
!!! TTATACGTACTTTTATTTGA+GGG - chr1_1:7446405-7446424 Msa0005000:CDS 20.0%
!!! TCTTGACAATTTGTATATTT+TGG - chr1_1:7446599-7446618 Msa0005000:CDS 20.0%
!! ACAATTCTATTGCAAAATAT+GGG + chr1_1:7446718-7446737 None:intergenic 20.0%
!! TACAATTCTATTGCAAAATA+TGG + chr1_1:7446719-7446738 None:intergenic 20.0%
!! ATATTGTATCTCAAAATACT+GGG + chr1_1:7446750-7446769 None:intergenic 20.0%
!! TATATTGTATCTCAAAATAC+TGG + chr1_1:7446751-7446770 None:intergenic 20.0%
!! AGTTCATTTGTATTTATTTG+TGG - chr1_1:7447070-7447089 Msa0005000:intron 20.0%
!!! CTGTTGATTATAATAATCAT+AGG + chr1_1:7447366-7447385 None:intergenic 20.0%
!!! TATGTTAATTTTGTTCTGAA+TGG - chr1_1:7448216-7448235 Msa0005000:CDS 20.0%
!! GAAATAAACTAATTTAACAC+AGG + chr1_1:7448315-7448334 None:intergenic 20.0%
!!! ATGTAAACTTGCTAAATATT+TGG - chr1_1:7448362-7448381 Msa0005000:five_prime_UTR 20.0%
!! TATACCTCTACAATCAATTT+TGG + chr1_1:7442355-7442374 None:intergenic 25.0%
!! ATAATTGACTTTGACATGTT+TGG - chr1_1:7442374-7442393 Msa0005000:CDS 25.0%
!! TGATTCTAGAAAGTAGAAAT+TGG - chr1_1:7442439-7442458 Msa0005000:CDS 25.0%
! GTATAGACTAAGTATATGTT+CGG + chr1_1:7442600-7442619 None:intergenic 25.0%
! ACTAATCTATTTGGAGAATT+AGG + chr1_1:7442879-7442898 None:intergenic 25.0%
! AAGACTCATTTGAATTAGTA+TGG - chr1_1:7443316-7443335 Msa0005000:intron 25.0%
!!! ATTTGTGTTGTGTTTTTAAC+AGG - chr1_1:7443466-7443485 Msa0005000:intron 25.0%
! ATAAATCATCATCATTGTTG+TGG - chr1_1:7443813-7443832 Msa0005000:intron 25.0%
! AATTGAATCTGCAAAACAAT+TGG - chr1_1:7444053-7444072 Msa0005000:intron 25.0%
! CTTAAAACTCAATTCTTTCT+TGG - chr1_1:7444372-7444391 Msa0005000:intron 25.0%
! AACAAGCTTAATTATTGTGT+GGG + chr1_1:7444400-7444419 None:intergenic 25.0%
!! TAAGATCACGATTTTTACTT+TGG - chr1_1:7444474-7444493 Msa0005000:intron 25.0%
!!! AGTTCTTACTAATTGATTTG+GGG - chr1_1:7444560-7444579 Msa0005000:intron 25.0%
! TATCTTACCATCTAAACATT+TGG + chr1_1:7444632-7444651 None:intergenic 25.0%
!! TGTATTCATAGAATTGATTC+GGG - chr1_1:7445001-7445020 Msa0005000:intron 25.0%
!! TGTATTCATAGAATTGATTC+GGG - chr1_1:7445001-7445020 Msa0005000:intron 25.0%
! TATAATTCCTATGAGTATCT+AGG + chr1_1:7445208-7445227 None:intergenic 25.0%
!!! ATTGTACGGTTAGTTTATAT+TGG - chr1_1:7445279-7445298 Msa0005000:intron 25.0%
! TTTATGTCTATGTCTATAGA+TGG - chr1_1:7445445-7445464 Msa0005000:intron 25.0%
! TATTATGCCAAATACAAGTT+GGG + chr1_1:7445514-7445533 None:intergenic 25.0%
! TTAAAATTATGCAGTATACG+AGG + chr1_1:7445544-7445563 None:intergenic 25.0%
! AAACAATCATGGTTGAAAAA+AGG + chr1_1:7445596-7445615 None:intergenic 25.0%
!! ATTGTTAGCTTAAACAATCA+TGG + chr1_1:7445607-7445626 None:intergenic 25.0%
! TAGTTTAACAACTACAAAAC+AGG + chr1_1:7446130-7446149 None:intergenic 25.0%
!! TTAGTTGTTAAGCATTTTAG+TGG - chr1_1:7446209-7446228 Msa0005000:intron 25.0%
! ATGATAAAAATTACGAGAAG+AGG + chr1_1:7446284-7446303 None:intergenic 25.0%
!! AGTTTGTTCTCTTAGATTAT+TGG - chr1_1:7446515-7446534 Msa0005000:intron 25.0%
! GTTTGTTCTCTTAGATTATT+GGG - chr1_1:7446516-7446535 Msa0005000:intron 25.0%
! TTTCTATTTACTTGTAGCAA+AGG - chr1_1:7446560-7446579 Msa0005000:CDS 25.0%
!!! ATTTGTATATTTTGGAGTCA+TGG - chr1_1:7446607-7446626 Msa0005000:CDS 25.0%
! AACTAAACAAGCTAAATGTA+GGG + chr1_1:7446664-7446683 None:intergenic 25.0%
! TAACTAAACAAGCTAAATGT+AGG + chr1_1:7446665-7446684 None:intergenic 25.0%
! CAATTCTATTGCAAAATATG+GGG + chr1_1:7446717-7446736 None:intergenic 25.0%
! TACATTATCAGATACCATAT+GGG + chr1_1:7446941-7446960 None:intergenic 25.0%
! TTACATTATCAGATACCATA+TGG + chr1_1:7446942-7446961 None:intergenic 25.0%
! TGTATGTAATACTACATCTT+GGG - chr1_1:7447045-7447064 Msa0005000:intron 25.0%
! GCGTACTTAAATATGAAAAA+TGG - chr1_1:7448384-7448403 Msa0005000:five_prime_UTR 25.0%
! AAAAATGGAACAAATCTGAT+AGG - chr1_1:7448399-7448418 Msa0005000:five_prime_UTR 25.0%
GCAACTAAAATTGAGTATAG+AGG - chr1_1:7442185-7442204 Msa0005000:CDS 30.0%
! AGAATTGATTCTGACATGTT+TGG - chr1_1:7442211-7442230 Msa0005000:CDS 30.0%
AAGAAGATTGAAATCCCTAA+TGG - chr1_1:7442753-7442772 Msa0005000:CDS 30.0%
!! GTTGGTGTTATTATTGGAAA+AGG - chr1_1:7442780-7442799 Msa0005000:CDS 30.0%
GTAAGCTCAACTAATCTATT+TGG + chr1_1:7442888-7442907 None:intergenic 30.0%
! AATAGATTAGTTGAGCTTAC+TGG - chr1_1:7442888-7442907 Msa0005000:CDS 30.0%
! TTGGCGTAAAAGTTTTTGAT+AGG - chr1_1:7443238-7443257 Msa0005000:intron 30.0%
!! CTTGTTATTTGGAATCTTCA+TGG + chr1_1:7443558-7443577 None:intergenic 30.0%
CATGAAGATTCCAAATAACA+AGG - chr1_1:7443556-7443575 Msa0005000:intron 30.0%
AAGATTCCAAATAACAAGGT+GGG - chr1_1:7443560-7443579 Msa0005000:intron 30.0%
!!! TTCTTCTTTTTTGGTTGGAA+TGG - chr1_1:7443643-7443662 Msa0005000:intron 30.0%
AACAAAACAAAATGAAGGCA+TGG + chr1_1:7443774-7443793 None:intergenic 30.0%
AGCACAACAAAACAAAATGA+AGG + chr1_1:7443779-7443798 None:intergenic 30.0%
TTGTACTTGTATGTTCTTTC+AGG - chr1_1:7443957-7443976 Msa0005000:intron 30.0%
AAATCCAACAGTAAAGCATA+GGG + chr1_1:7444114-7444133 None:intergenic 30.0%
AGATACAGACAATAACTACA+AGG + chr1_1:7444211-7444230 None:intergenic 30.0%
GAACAAGCTTAATTATTGTG+TGG + chr1_1:7444401-7444420 None:intergenic 30.0%
! CACAATAATTAAGCTTGTTC+AGG - chr1_1:7444401-7444420 Msa0005000:intron 30.0%
CTATTATGCCAAATACAAGT+TGG + chr1_1:7445515-7445534 None:intergenic 30.0%
!! TTGTGTTGATTAGTTCATTG+TGG - chr1_1:7445666-7445685 Msa0005000:intron 30.0%
!! TGTGTTGATTAGTTCATTGT+GGG - chr1_1:7445667-7445686 Msa0005000:intron 30.0%
GTTAGTTATGAAGTAAATCC+AGG + chr1_1:7445933-7445952 None:intergenic 30.0%
!! TGTACTGATTAGTTCATTGT+TGG - chr1_1:7445996-7446015 Msa0005000:intron 30.0%
! AGTTTGTTCTCCTAGATTAT+TGG - chr1_1:7446437-7446456 Msa0005000:intron 30.0%
GTTTGTTCTCCTAGATTATT+GGG - chr1_1:7446438-7446457 Msa0005000:intron 30.0%
TAGATTATTGGGTGAAGTTT+GGG - chr1_1:7446449-7446468 Msa0005000:intron 30.0%
TTAGATTATTGGGTGATGTT+TGG - chr1_1:7446526-7446545 Msa0005000:intron 30.0%
TAGATTATTGGGTGATGTTT+GGG - chr1_1:7446527-7446546 Msa0005000:intron 30.0%
CAATATAGTGTATTTCCTTG+AGG - chr1_1:7446764-7446783 Msa0005000:intron 30.0%
ATATGATATTCATTGCCTCA+AGG + chr1_1:7446782-7446801 None:intergenic 30.0%
ATACCATATGGGATTAGAAA+GGG + chr1_1:7446930-7446949 None:intergenic 30.0%
CTGTATGTAATACTACATCT+TGG - chr1_1:7447044-7447063 Msa0005000:intron 30.0%
ATTGGAACTGGAATTGGAAT+CGG + chr1_1:7441767-7441786 None:intergenic 35.0%
TTTGATGAGTTCGAAATCAG+CGG + chr1_1:7441930-7441949 None:intergenic 35.0%
CACTCCAAAATTGATTGTAG+AGG - chr1_1:7442348-7442367 Msa0005000:CDS 35.0%
! GAATACGAAGGTATACTCAT+AGG + chr1_1:7442717-7442736 None:intergenic 35.0%
AGATTGAAATCCCTAATGGA+AGG - chr1_1:7442757-7442776 Msa0005000:CDS 35.0%
GATTGAAATCCCTAATGGAA+GGG - chr1_1:7442758-7442777 Msa0005000:CDS 35.0%
!! GGTGTTATTATTGGAAAAGG+TGG - chr1_1:7442783-7442802 Msa0005000:CDS 35.0%
AAGTATCTTCAGTTGCAATC+TGG - chr1_1:7442816-7442835 Msa0005000:CDS 35.0%
GTGTAGATGTGATCATTGTA+TGG - chr1_1:7443406-7443425 Msa0005000:intron 35.0%
GAAGATTCCAAATAACAAGG+TGG - chr1_1:7443559-7443578 Msa0005000:intron 35.0%
! GTGTTTTGTACATTACTCCT+AGG + chr1_1:7443586-7443605 None:intergenic 35.0%
!! CTACAGGTTGGTCTTATAAT+CGG - chr1_1:7443678-7443697 Msa0005000:intron 35.0%
!! GTTGGTCTTATAATCGGTAA+AGG - chr1_1:7443684-7443703 Msa0005000:intron 35.0%
! TGCAGATTCAATTTGTTCAG+AGG + chr1_1:7444046-7444065 None:intergenic 35.0%
CAAATCCAACAGTAAAGCAT+AGG + chr1_1:7444115-7444134 None:intergenic 35.0%
CTATGCTTTACTGTTGGATT+TGG - chr1_1:7444113-7444132 Msa0005000:intron 35.0%
AGCAAAACAAGCTATAACCA+AGG + chr1_1:7444139-7444158 None:intergenic 35.0%
TGCTATTCTCTTATGATTGC+TGG - chr1_1:7444329-7444348 Msa0005000:intron 35.0%
ATTCTCTTATGATTGCTGGA+TGG - chr1_1:7444333-7444352 Msa0005000:intron 35.0%
TTCTCTTATGATTGCTGGAT+GGG - chr1_1:7444334-7444353 Msa0005000:intron 35.0%
TGCTATTGTTCATGCATTGA+AGG - chr1_1:7444446-7444465 Msa0005000:intron 35.0%
AGCTTAGCCAAATGTTTAGA+TGG - chr1_1:7444622-7444641 Msa0005000:intron 35.0%
GATAAGTAGCCATTTCTTCA+TGG - chr1_1:7444648-7444667 Msa0005000:intron 35.0%
!! ATTCATAGAATTGATTCGGG+AGG - chr1_1:7445004-7445023 Msa0005000:intron 35.0%
! ATGTTGCGCTTTAGATTCAT+AGG - chr1_1:7445156-7445175 Msa0005000:intron 35.0%
! TGTTGCGCTTTAGATTCATA+GGG - chr1_1:7445157-7445176 Msa0005000:intron 35.0%
TTTAGATTCATAGGGATGTC+TGG - chr1_1:7445165-7445184 Msa0005000:intron 35.0%
TTAGATTCATAGGGATGTCT+GGG - chr1_1:7445166-7445185 Msa0005000:intron 35.0%
AATTATAGCCTGTTCAACAG+TGG - chr1_1:7445221-7445240 Msa0005000:intron 35.0%
TAATAAGACCACTGTTGAAC+AGG + chr1_1:7445232-7445251 None:intergenic 35.0%
! TTCCATGTTAGTGTCACTAA+TGG + chr1_1:7445306-7445325 None:intergenic 35.0%
GTGTAAGAAACACCAACAAA+GGG + chr1_1:7445330-7445349 None:intergenic 35.0%
TGTGTAAGAAACACCAACAA+AGG + chr1_1:7445331-7445350 None:intergenic 35.0%
! CTGAGCATCAAGTCTTATAT+TGG - chr1_1:7445389-7445408 Msa0005000:intron 35.0%
! GCATCAAGTCTTATATTGGT+CGG - chr1_1:7445393-7445412 Msa0005000:intron 35.0%
CTGAAAAATGGCAGTCAAAA+CGG + chr1_1:7445483-7445502 None:intergenic 35.0%
TCTGATACCCAACTTGTATT+TGG - chr1_1:7445504-7445523 Msa0005000:intron 35.0%
TTATGCAGTATACGAGGTTA+AGG + chr1_1:7445538-7445557 None:intergenic 35.0%
TCATATGCTGGAGTTATGTT+TGG - chr1_1:7445730-7445749 Msa0005000:intron 35.0%
! CTGAATCTCTTATTTCAACC+TGG - chr1_1:7445912-7445931 Msa0005000:intron 35.0%
! TTTTATGCTGGAGCTATGTT+TGG - chr1_1:7446059-7446078 Msa0005000:CDS 35.0%
GTTTCGGAATAAAAAGCTTC+AGG + chr1_1:7446093-7446112 None:intergenic 35.0%
GGATGTTGGAATAAGAGTTT+CGG + chr1_1:7446109-7446128 None:intergenic 35.0%
ACAACTACAAAACAGGATGT+TGG + chr1_1:7446123-7446142 None:intergenic 35.0%
! AACAAAGCACCATAACAAGA+AGG + chr1_1:7446248-7446267 None:intergenic 35.0%
GCAATATGAGAGGAAATCAA+GGG + chr1_1:7446374-7446393 None:intergenic 35.0%
AGCAATATGAGAGGAAATCA+AGG + chr1_1:7446375-7446394 None:intergenic 35.0%
ATTTCCTCTCATATTGCTGT+TGG - chr1_1:7446377-7446396 Msa0005000:CDS 35.0%
TAAACCAACAGCAATATGAG+AGG + chr1_1:7446384-7446403 None:intergenic 35.0%
!! GTACTTTTATTTGAGGGTTC+CGG - chr1_1:7446411-7446430 Msa0005000:CDS 35.0%
CAAACTTCACCCAATAATCT+AGG + chr1_1:7446450-7446469 None:intergenic 35.0%
CTAGATTATTGGGTGAAGTT+TGG - chr1_1:7446448-7446467 Msa0005000:intron 35.0%
AGATTATTGGGTGAAGTTTG+GGG - chr1_1:7446450-7446469 Msa0005000:intron 35.0%
ATGTACGTACTTCTATCTGA+TGG - chr1_1:7446483-7446502 Msa0005000:intron 35.0%
TCTAAGAGAACAAACTTGAC+TGG + chr1_1:7446511-7446530 None:intergenic 35.0%
AGATTATTGGGTGATGTTTG+GGG - chr1_1:7446528-7446547 Msa0005000:intron 35.0%
TTGCAAAATATGGGGTGATA+TGG + chr1_1:7446709-7446728 None:intergenic 35.0%
TCGAAATGAATGGGTACAAA+AGG + chr1_1:7446833-7446852 None:intergenic 35.0%
TGTACCCATTCATTTCGAAT+AGG - chr1_1:7446835-7446854 Msa0005000:intron 35.0%
GTACCCATTCATTTCGAATA+GGG - chr1_1:7446836-7446855 Msa0005000:intron 35.0%
TCTCCCTATTCGAAATGAAT+GGG + chr1_1:7446842-7446861 None:intergenic 35.0%
ATTCATTTCGAATAGGGAGA+GGG - chr1_1:7446842-7446861 Msa0005000:intron 35.0%
TACCATATGGGATTAGAAAG+GGG + chr1_1:7446929-7446948 None:intergenic 35.0%
GATACCATATGGGATTAGAA+AGG + chr1_1:7446931-7446950 None:intergenic 35.0%
CTTAGAAATCCATCAATGTC+CGG - chr1_1:7447119-7447138 Msa0005000:intron 35.0%
! TGGTGGATATTCTACCAATT+GGG - chr1_1:7447310-7447329 Msa0005000:CDS 35.0%
ATAATCATAGGTAGACTGCT+GGG + chr1_1:7447354-7447373 None:intergenic 35.0%
AATAATCATAGGTAGACTGC+TGG + chr1_1:7447355-7447374 None:intergenic 35.0%
TATGATCAGCAGCAAATCTA+TGG - chr1_1:7447557-7447576 Msa0005000:intron 35.0%
ATATTAGTACATCAGCTCTG+AGG + chr1_1:7448199-7448218 None:intergenic 35.0%
AATCTCAAAGTTGCAAAGCT+GGG + chr1_1:7448283-7448302 None:intergenic 35.0%
AATGGAACAAATCTGATAGG+AGG - chr1_1:7448402-7448421 Msa0005000:five_prime_UTR 35.0%
GATTCCAATTCCAGTTCCAA+TGG - chr1_1:7441766-7441785 Msa0005000:three_prime_UTR 40.0%
AAACGGACCAAATTCGACAA+CGG - chr1_1:7442013-7442032 Msa0005000:CDS 40.0%
ACTGACCTGATGAATCGTAA+GGG + chr1_1:7442048-7442067 None:intergenic 40.0%
ATACCTTCGTATTCGCATCA+AGG - chr1_1:7442723-7442742 Msa0005000:CDS 40.0%
TACCTTCGTATTCGCATCAA+GGG - chr1_1:7442724-7442743 Msa0005000:CDS 40.0%
TAACACCAACCCTTCCATTA+GGG + chr1_1:7442770-7442789 None:intergenic 40.0%
ATAACACCAACCCTTCCATT+AGG + chr1_1:7442771-7442790 None:intergenic 40.0%
!! GGAAGGGTTGGTGTTATTAT+TGG - chr1_1:7442774-7442793 Msa0005000:CDS 40.0%
AATCCAAGTTACCCGTGATA+TGG - chr1_1:7442845-7442864 Msa0005000:CDS 40.0%
TAGGATCAGCATCCATATCA+CGG + chr1_1:7442860-7442879 None:intergenic 40.0%
CATCAATGAAGTTCTTGCTG+AGG - chr1_1:7442944-7442963 Msa0005000:CDS 40.0%
!!! TGTCATTGTGAGCTGGTTTT+TGG - chr1_1:7443058-7443077 Msa0005000:intron 40.0%
!!! ATTGTGAGCTGGTTTTTGGA+GGG - chr1_1:7443062-7443081 Msa0005000:intron 40.0%
!! TGTTTTTAACAGGCTGAGTC+TGG - chr1_1:7443476-7443495 Msa0005000:intron 40.0%
! TGTTGTGCGTTGAGTTCTTT+TGG - chr1_1:7443611-7443630 Msa0005000:intron 40.0%
! ATGGTTTTTCCTGTGTCTAC+AGG - chr1_1:7443662-7443681 Msa0005000:intron 40.0%
! TTTTTCCTGTGTCTACAGGT+TGG - chr1_1:7443666-7443685 Msa0005000:intron 40.0%
! GGTCTTATAATCGGTAAAGG+TGG - chr1_1:7443687-7443706 Msa0005000:intron 40.0%
! AAGAGTATGCAAGCTACAAC+TGG - chr1_1:7443720-7443739 Msa0005000:intron 40.0%
TACAACTGGAGCAAGAATTC+AGG - chr1_1:7443734-7443753 Msa0005000:intron 40.0%
! AATGAAGGCATGGCTTAAGA+AGG + chr1_1:7443764-7443783 None:intergenic 40.0%
! TTGGTTGATTCAATCCTCAG+TGG - chr1_1:7444072-7444091 Msa0005000:intron 40.0%
TGTACCCTATGCTTTACTGT+TGG - chr1_1:7444107-7444126 Msa0005000:intron 40.0%
TTTACTGTTGGATTTGGCCT+TGG - chr1_1:7444119-7444138 Msa0005000:intron 40.0%
CTTCGAAGCAAAACTAGACT+TGG + chr1_1:7444171-7444190 None:intergenic 40.0%
TCTTGACCTATGCAATCTGT+CGG - chr1_1:7444525-7444544 Msa0005000:intron 40.0%
TAGCCATTTCTTCATGGCTA+AGG - chr1_1:7444654-7444673 Msa0005000:intron 40.0%
AAAAAGCCTGCGCAAAAGAT+TGG + chr1_1:7445106-7445125 None:intergenic 40.0%
GTCACAACCTAGATACTCAT+AGG - chr1_1:7445198-7445217 Msa0005000:intron 40.0%
GACCATTAGTGACACTAACA+TGG - chr1_1:7445301-7445320 Msa0005000:intron 40.0%
CTAACATGGAATCCCTTTGT+TGG - chr1_1:7445315-7445334 Msa0005000:intron 40.0%
TGGTGTTTCTTACACATGCA+AGG - chr1_1:7445335-7445354 Msa0005000:intron 40.0%
GGTGTTTCTTACACATGCAA+GGG - chr1_1:7445336-7445355 Msa0005000:intron 40.0%
TTCTTACACATGCAAGGGTA+TGG - chr1_1:7445341-7445360 Msa0005000:intron 40.0%
!!! CGTTTTGACTGCCATTTTTC+AGG - chr1_1:7445481-7445500 Msa0005000:intron 40.0%
TGGGTATCAGACCTGAAAAA+TGG + chr1_1:7445495-7445514 None:intergenic 40.0%
TAACTCCAGCATATGACACA+AGG + chr1_1:7445726-7445745 None:intergenic 40.0%
! AATGACAATGTGTTTGCTGC+AGG + chr1_1:7445764-7445783 None:intergenic 40.0%
TAACTCCAGCATACAACAAG+AGG + chr1_1:7445861-7445880 None:intergenic 40.0%
GATTCAGAATGAAAAGCTGC+TGG + chr1_1:7445899-7445918 None:intergenic 40.0%
TCACTCCTACCTTCTTGTTA+TGG - chr1_1:7446236-7446255 Msa0005000:intron 40.0%
AAGCACCATAACAAGAAGGT+AGG + chr1_1:7446244-7446263 None:intergenic 40.0%
AATCAAGGGATAAAGACGAG+TGG + chr1_1:7446360-7446379 None:intergenic 40.0%
TCTAGGAGAACAAACTTGAC+CGG + chr1_1:7446433-7446452 None:intergenic 40.0%
GATTATTGGGTGAAGTTTGG+GGG - chr1_1:7446451-7446470 Msa0005000:intron 40.0%
CATATAGACTGCATAAGCAG+CGG + chr1_1:7446636-7446655 None:intergenic 40.0%
CATATGCTTGTCTACTTCTG+TGG - chr1_1:7446797-7446816 Msa0005000:intron 40.0%
CTCTCCCTATTCGAAATGAA+TGG + chr1_1:7446843-7446862 None:intergenic 40.0%
CATTCATTTCGAATAGGGAG+AGG - chr1_1:7446841-7446860 Msa0005000:intron 40.0%
!! AACTCAGTTTTGTCTCGATC+TGG - chr1_1:7446882-7446901 Msa0005000:intron 40.0%
!! AGTTTTGTCTCGATCTGGTA+CGG - chr1_1:7446887-7446906 Msa0005000:intron 40.0%
! GGGATTAGAAAGGGGTATAA+AGG + chr1_1:7446921-7446940 None:intergenic 40.0%
TACCCCTTTCTAATCCCATA+TGG - chr1_1:7446924-7446943 Msa0005000:intron 40.0%
ATAACCAGGTTGTTGAGAAG+CGG + chr1_1:7447201-7447220 None:intergenic 40.0%
! CTGGTGGATATTCTACCAAT+TGG - chr1_1:7447309-7447328 Msa0005000:CDS 40.0%
GTATATTCTCAGGATGGCTA+TGG - chr1_1:7447488-7447507 Msa0005000:intron 40.0%
TATCAACAACCACCACAATC+AGG - chr1_1:7447515-7447534 Msa0005000:intron 40.0%
ATCAACAACCACCACAATCA+GGG - chr1_1:7447516-7447535 Msa0005000:intron 40.0%
TGCTGCTGATCATATGATGT+TGG + chr1_1:7447551-7447570 None:intergenic 40.0%
!! ATCCATAGTTGGTGGTAGTT+TGG + chr1_1:7447616-7447635 None:intergenic 40.0%
ACCACCAACTATGGATCAAA+AGG - chr1_1:7447620-7447639 Msa0005000:intron 40.0%
CCACCAACTATGGATCAAAA+GGG - chr1_1:7447621-7447640 Msa0005000:intron 40.0%
CACCAACTATGGATCAAAAG+GGG - chr1_1:7447622-7447641 Msa0005000:intron 40.0%
! ATCCCCTTTTGATCCATAGT+TGG + chr1_1:7447627-7447646 None:intergenic 40.0%
! CATAACCTTGTTGTGAAGGT+TGG + chr1_1:7447670-7447689 None:intergenic 40.0%
CAACCTTCACAACAAGGTTA+TGG - chr1_1:7447668-7447687 Msa0005000:intron 40.0%
! CTACCATAACCTTGTTGTGA+AGG + chr1_1:7447674-7447693 None:intergenic 40.0%
!!! ACTTGGCTTTTGAGTTTGAG+GGG + chr1_1:7447825-7447844 None:intergenic 40.0%
!!! CACTTGGCTTTTGAGTTTGA+GGG + chr1_1:7447826-7447845 None:intergenic 40.0%
TACCATCAGCAGAATATGCT+GGG + chr1_1:7448096-7448115 None:intergenic 40.0%
TTACCATCAGCAGAATATGC+TGG + chr1_1:7448097-7448116 None:intergenic 40.0%
CAATCTCAAAGTTGCAAAGC+TGG + chr1_1:7448284-7448303 None:intergenic 40.0%
GAACAAATCTGATAGGAGGT+TGG - chr1_1:7448406-7448425 Msa0005000:five_prime_UTR 40.0%
AAGAAACCCTAGCTGTAGCT+GGG + chr1_1:7441731-7441750 None:intergenic 45.0%
TCAGCCATTGGAACTGGAAT+TGG + chr1_1:7441773-7441792 None:intergenic 45.0%
TATTGCGATTCGTCAGCCAT+TGG + chr1_1:7441785-7441804 None:intergenic 45.0%
TTCGTCGTACTTGCGTTTCA+GGG + chr1_1:7441825-7441844 None:intergenic 45.0%
TTGTTGTAAGAAGGAGGAGG+AGG + chr1_1:7441890-7441909 None:intergenic 45.0%
ACGTTGTTGTAAGAAGGAGG+AGG + chr1_1:7441893-7441912 None:intergenic 45.0%
CTGACCTGATGAATCGTAAG+GGG + chr1_1:7442047-7442066 None:intergenic 45.0%
CACTGACCTGATGAATCGTA+AGG + chr1_1:7442049-7442068 None:intergenic 45.0%
GAAATCCCTAATGGAAGGGT+TGG - chr1_1:7442762-7442781 Msa0005000:CDS 45.0%
CATCCATATCACGGGTAACT+TGG + chr1_1:7442851-7442870 None:intergenic 45.0%
AGGATCAGCATCCATATCAC+GGG + chr1_1:7442859-7442878 None:intergenic 45.0%
!!! CATTGTGAGCTGGTTTTTGG+AGG - chr1_1:7443061-7443080 Msa0005000:intron 45.0%
!!! AGCTGGTTTTTGGAGGGTTT+TGG - chr1_1:7443068-7443087 Msa0005000:intron 45.0%
! TTTTAACAGGCTGAGTCTGG+AGG - chr1_1:7443479-7443498 Msa0005000:intron 45.0%
CTTGTTACTCGACGAATGAC+TGG - chr1_1:7443509-7443528 Msa0005000:intron 45.0%
TAAGACCAACCTGTAGACAC+AGG + chr1_1:7443674-7443693 None:intergenic 45.0%
GCAAAACTAGACTTGGCACA+TGG + chr1_1:7444164-7444183 None:intergenic 45.0%
!! CTATGCAATCTGTCGGCTTT+CGG - chr1_1:7444532-7444551 Msa0005000:intron 45.0%
ACGCCTTAGCCATGAAGAAA+TGG + chr1_1:7444660-7444679 None:intergenic 45.0%
CTTCTCAGTCCTTGCTAACT+CGG - chr1_1:7444920-7444939 Msa0005000:intron 45.0%
GACACAAAACCGAGTTAGCA+AGG + chr1_1:7444932-7444951 None:intergenic 45.0%
! GTGATACCAATCTTTTGCGC+AGG - chr1_1:7445097-7445116 Msa0005000:intron 45.0%
AGTATCTAGGTTGTGACCAG+AGG + chr1_1:7445195-7445214 None:intergenic 45.0%
GTTGTCCTTGTGTCATATGC+TGG - chr1_1:7445718-7445737 Msa0005000:intron 45.0%
! GTTGTCCTCTTGTTGTATGC+TGG - chr1_1:7445853-7445872 Msa0005000:intron 45.0%
! GTTGTCCTCGTGTTTTATGC+TGG - chr1_1:7446047-7446066 Msa0005000:CDS 45.0%
TAGCTCCAGCATAAAACACG+AGG + chr1_1:7446055-7446074 None:intergenic 45.0%
ACGAGAAGAGGCTATAAGAG+CGG + chr1_1:7446272-7446291 None:intergenic 45.0%
TATTGGGTGATGTTTGGGGA+AGG - chr1_1:7446532-7446551 Msa0005000:intron 45.0%
AGAAATCCATCAATGTCCGG+TGG - chr1_1:7447122-7447141 Msa0005000:intron 45.0%
GCTTCTCAACAACCTGGTTA+TGG - chr1_1:7447200-7447219 Msa0005000:CDS 45.0%
TTGCTGAGGCACATTGTACT+GGG + chr1_1:7447261-7447280 None:intergenic 45.0%
!! TAACCTGCATAAGCTTGCTG+AGG + chr1_1:7447275-7447294 None:intergenic 45.0%
AGAATATCCACCAGCTGAGT+GGG + chr1_1:7447303-7447322 None:intergenic 45.0%
TAGAATATCCACCAGCTGAG+TGG + chr1_1:7447304-7447323 None:intergenic 45.0%
! ATCCGCTGGTTATAACCAAC+CGG - chr1_1:7447460-7447479 Msa0005000:intron 45.0%
! CCCTTTTGATCCATAGTTGG+TGG + chr1_1:7447624-7447643 None:intergenic 45.0%
GTGGATAGTTGGCAGCATTT+GGG + chr1_1:7447712-7447731 None:intergenic 45.0%
! AACCAGACTGTGTTTGAGGT+TGG + chr1_1:7447796-7447815 None:intergenic 45.0%
CCATAACCAGACTGTGTTTG+AGG + chr1_1:7447800-7447819 None:intergenic 45.0%
CCTCAAACACAGTCTGGTTA+TGG - chr1_1:7447797-7447816 Msa0005000:intron 45.0%
!!! CTTGGCTTTTGAGTTTGAGG+GGG + chr1_1:7447824-7447843 None:intergenic 45.0%
!!! CCACTTGGCTTTTGAGTTTG+AGG + chr1_1:7447827-7447846 None:intergenic 45.0%
CCTCAAACTCAAAAGCCAAG+TGG - chr1_1:7447824-7447843 Msa0005000:intron 45.0%
TTGGGAATATCCAGAAGGAG+GGG + chr1_1:7447930-7447949 None:intergenic 45.0%
GTTGGGAATATCCAGAAGGA+GGG + chr1_1:7447931-7447950 None:intergenic 45.0%
TCTGGTTGGGAATATCCAGA+AGG + chr1_1:7447935-7447954 None:intergenic 45.0%
GGTTATGGTCCTCCATCATA+TGG - chr1_1:7447983-7448002 Msa0005000:intron 45.0%
! TATGACGGAGGACCATATGA+TGG + chr1_1:7447998-7448017 None:intergenic 45.0%
TCATATGGTCCTCCGTCATA+TGG - chr1_1:7447998-7448017 Msa0005000:intron 45.0%
ACCATCAGCAGAATATGCTG+GGG + chr1_1:7448095-7448114 None:intergenic 45.0%
! TCTGCTGATGGTAATGCAAG+TGG - chr1_1:7448103-7448122 Msa0005000:CDS 45.0%
! CTGCTGATGGTAATGCAAGT+GGG - chr1_1:7448104-7448123 Msa0005000:CDS 45.0%
TCAAAGTTGCAAAGCTGGGT+AGG + chr1_1:7448279-7448298 None:intergenic 45.0%
!!! TATTTTTTATTTGAAAATAT+AGG - chr1_1:7443365-7443384 Msa0005000:intron 5.0%
! TGCGTCTGTGTCACGTGTTT+TGG + chr1_1:7441690-7441709 None:intergenic 50.0%
TCTATCCCCAGCTACAGCTA+GGG - chr1_1:7441722-7441741 Msa0005000:three_prime_UTR 50.0%
AGAAACCCTAGCTGTAGCTG+GGG + chr1_1:7441730-7441749 None:intergenic 50.0%
GAAGAAACCCTAGCTGTAGC+TGG + chr1_1:7441732-7441751 None:intergenic 50.0%
GATTCGTCAGCCATTGGAAC+TGG + chr1_1:7441779-7441798 None:intergenic 50.0%
TACTTGCGTTTCAGGGAAGG+TGG + chr1_1:7441818-7441837 None:intergenic 50.0%
TCGTACTTGCGTTTCAGGGA+AGG + chr1_1:7441821-7441840 None:intergenic 50.0%
GTTCGTCGTACTTGCGTTTC+AGG + chr1_1:7441826-7441845 None:intergenic 50.0%
GGGACGTTGTTGTAAGAAGG+AGG + chr1_1:7441896-7441915 None:intergenic 50.0%
GATGAGTTCGAAATCAGCGG+TGG + chr1_1:7441927-7441946 None:intergenic 50.0%
CTCCCTCTGATGTCGTCAAA+CGG - chr1_1:7441996-7442015 Msa0005000:CDS 50.0%
GTCCGTTTGACGACATCAGA+GGG + chr1_1:7442001-7442020 None:intergenic 50.0%
AGGAGGACCGTTGTCGAATT+TGG + chr1_1:7442023-7442042 None:intergenic 50.0%
GATGAATCGTAAGGGGAAGG+AGG + chr1_1:7442040-7442059 None:intergenic 50.0%
CCTGATGAATCGTAAGGGGA+AGG + chr1_1:7442043-7442062 None:intergenic 50.0%
CCTTCCCCTTACGATTCATC+AGG - chr1_1:7442040-7442059 Msa0005000:CDS 50.0%
GACCCTTGATGCGAATACGA+AGG + chr1_1:7442729-7442748 None:intergenic 50.0%
!! CTTAGGGTGTCATTGTGAGC+TGG - chr1_1:7443051-7443070 Msa0005000:intron 50.0%
!!! GGTTTTGGAGCCAAGAGCTT+TGG - chr1_1:7443083-7443102 Msa0005000:intron 50.0%
! TTTGGAGCCAAGAGCTTTGG+AGG - chr1_1:7443086-7443105 Msa0005000:intron 50.0%
!! TTGGAGCCAAGAGCTTTGGA+GGG - chr1_1:7443087-7443106 Msa0005000:intron 50.0%
ACTTAGCCCTCCAAAGCTCT+TGG + chr1_1:7443096-7443115 None:intergenic 50.0%
TACTCGACGAATGACTGGAC+AGG - chr1_1:7443514-7443533 Msa0005000:intron 50.0%
ACTCGACGAATGACTGGACA+GGG - chr1_1:7443515-7443534 Msa0005000:intron 50.0%
!! CCTAGGCCCACCTTGTTATT+TGG + chr1_1:7443569-7443588 None:intergenic 50.0%
CCAAATAACAAGGTGGGCCT+AGG - chr1_1:7443566-7443585 Msa0005000:intron 50.0%
ATTCCTCTTCATCTTCCCCC+AGG - chr1_1:7443982-7444001 Msa0005000:intron 50.0%
TTTCAGTGGATGTGTCGCCT+GGG + chr1_1:7444002-7444021 None:intergenic 50.0%
TGATTCAATCCTCAGTGGCG+AGG - chr1_1:7444077-7444096 Msa0005000:intron 50.0%
CAAAACATACCTCGCCACTG+AGG + chr1_1:7444089-7444108 None:intergenic 50.0%
CGAAAGCCGACAGATTGCAT+AGG + chr1_1:7444534-7444553 None:intergenic 50.0%
GGTCGGTATGATGTCATCAC+TGG - chr1_1:7445410-7445429 Msa0005000:intron 50.0%
TATTGGGTGAAGTTTGGGGG+AGG - chr1_1:7446454-7446473 Msa0005000:intron 50.0%
CTCGATCTGGTACGGTATGT+TGG - chr1_1:7446895-7446914 Msa0005000:intron 50.0%
GAGTAACCACCGGACATTGA+TGG + chr1_1:7447131-7447150 None:intergenic 50.0%
ACCTTGCTGAGAGTAACCAC+CGG + chr1_1:7447141-7447160 None:intergenic 50.0%
CTCAGCAAGGTTACCAAGCT+CGG - chr1_1:7447150-7447169 Msa0005000:intron 50.0%
TGTACTGGGAAGTTGGACCA+GGG + chr1_1:7447247-7447266 None:intergenic 50.0%
TTGTACTGGGAAGTTGGACC+AGG + chr1_1:7447248-7447267 None:intergenic 50.0%
GGCACATTGTACTGGGAAGT+TGG + chr1_1:7447254-7447273 None:intergenic 50.0%
CTTGCTGAGGCACATTGTAC+TGG + chr1_1:7447262-7447281 None:intergenic 50.0%
GAATATCCACCAGCTGAGTG+GGG + chr1_1:7447302-7447321 None:intergenic 50.0%
TTGTAAGCAGTCCCATCAGC+TGG + chr1_1:7447425-7447444 None:intergenic 50.0%
TACAATCAACCACCATCCGC+TGG - chr1_1:7447446-7447465 Msa0005000:intron 50.0%
TGGTTATAACCAGCGGATGG+TGG + chr1_1:7447458-7447477 None:intergenic 50.0%
! GGTTGGTTATAACCAGCGGA+TGG + chr1_1:7447461-7447480 None:intergenic 50.0%
! TCCGCTGGTTATAACCAACC+GGG - chr1_1:7447461-7447480 Msa0005000:intron 50.0%
TCCTGAGAATATACCTGCCC+CGG + chr1_1:7447482-7447501 None:intergenic 50.0%
GGGCAGGTATATTCTCAGGA+TGG - chr1_1:7447482-7447501 Msa0005000:intron 50.0%
TGAGCATACCCTGATTGTGG+TGG + chr1_1:7447527-7447546 None:intergenic 50.0%
TTGAGCTGACCCATAGCTTG+GGG + chr1_1:7447588-7447607 None:intergenic 50.0%
CTTGAGCTGACCCATAGCTT+GGG + chr1_1:7447589-7447608 None:intergenic 50.0%
TCTTGAGCTGACCCATAGCT+TGG + chr1_1:7447590-7447609 None:intergenic 50.0%
AAGCTATGGGTCAGCTCAAG+AGG - chr1_1:7447589-7447608 Msa0005000:intron 50.0%
AGCTATGGGTCAGCTCAAGA+GGG - chr1_1:7447590-7447609 Msa0005000:intron 50.0%
GGCCAAACTACCACCAACTA+TGG - chr1_1:7447611-7447630 Msa0005000:intron 50.0%
AGGTTGGACAGGTGGAACTT+GGG + chr1_1:7447654-7447673 None:intergenic 50.0%
AAGGTTGGACAGGTGGAACT+TGG + chr1_1:7447655-7447674 None:intergenic 50.0%
TGTTGTGAAGGTTGGACAGG+TGG + chr1_1:7447662-7447681 None:intergenic 50.0%
! CCTTGTTGTGAAGGTTGGAC+AGG + chr1_1:7447665-7447684 None:intergenic 50.0%
CCTGTCCAACCTTCACAACA+AGG - chr1_1:7447662-7447681 Msa0005000:intron 50.0%
TAGTTGGCAGCATTTGGGCT+AGG + chr1_1:7447707-7447726 None:intergenic 50.0%
GGTGGATAGTTGGCAGCATT+TGG + chr1_1:7447713-7447732 None:intergenic 50.0%
CTGCCAACTATCCACCACAA+GGG - chr1_1:7447717-7447736 Msa0005000:intron 50.0%
TGCCAACTATCCACCACAAG+GGG - chr1_1:7447718-7447737 Msa0005000:intron 50.0%
! TTGGCTGCCATATGCTGCTT+GGG + chr1_1:7447777-7447796 None:intergenic 50.0%
AGCCAACCTCAAACACAGTC+TGG - chr1_1:7447791-7447810 Msa0005000:intron 50.0%
TGTGATTGTCCGTATGCAGG+CGG + chr1_1:7447854-7447873 None:intergenic 50.0%
GACTGTGATTGTCCGTATGC+AGG + chr1_1:7447857-7447876 None:intergenic 50.0%
TCACAGTCACCTAATGCTGC+TGG - chr1_1:7447869-7447888 Msa0005000:intron 50.0%
CCATAACCTCCAGCAGCATT+AGG + chr1_1:7447881-7447900 None:intergenic 50.0%
CCTAATGCTGCTGGAGGTTA+TGG - chr1_1:7447878-7447897 Msa0005000:intron 50.0%
CTGGAGGTTATGGTCAACCT+GGG - chr1_1:7447888-7447907 Msa0005000:intron 50.0%
TGGGAATATCCAGAAGGAGG+GGG + chr1_1:7447929-7447948 None:intergenic 50.0%
GGTTGGGAATATCCAGAAGG+AGG + chr1_1:7447932-7447951 None:intergenic 50.0%
GGATATTCCCAACCAGAAGC+AGG - chr1_1:7447938-7447957 Msa0005000:intron 50.0%
! TTGAGAGCCTGCTTCTGGTT+GGG + chr1_1:7447948-7447967 None:intergenic 50.0%
TTTGAGAGCCTGCTTCTGGT+TGG + chr1_1:7447949-7447968 None:intergenic 50.0%
!! TCTCAAAGAGCACCACCTTC+TGG - chr1_1:7447962-7447981 Msa0005000:intron 50.0%
! AGAGCACCACCTTCTGGTTA+TGG - chr1_1:7447968-7447987 Msa0005000:intron 50.0%
GATGGAGGACCATAACCAGA+AGG + chr1_1:7447980-7447999 None:intergenic 50.0%
CTGAGGATAACCAGCACCAT+AGG + chr1_1:7448071-7448090 None:intergenic 50.0%
!! CTATGGTGCTGGTTATCCTC+AGG - chr1_1:7448069-7448088 Msa0005000:CDS 50.0%
TCCATCATAGCTACCACCAC+GGG + chr1_1:7448134-7448153 None:intergenic 50.0%
CTCCATCATAGCTACCACCA+CGG + chr1_1:7448135-7448154 None:intergenic 50.0%
! TATGATGGAGCACCTGCACA+GGG - chr1_1:7448145-7448164 Msa0005000:CDS 50.0%
GTTGCAAAGCTGGGTAGGTA+AGG + chr1_1:7448274-7448293 None:intergenic 50.0%
CTAGCTGTAGCTGGGGATAG+AGG + chr1_1:7441723-7441742 None:intergenic 55.0%
CTCTATCCCCAGCTACAGCT+AGG - chr1_1:7441721-7441740 Msa0005000:three_prime_UTR 55.0%
AAACCGGTGGTTCGTGAGTG+AGG + chr1_1:7441857-7441876 None:intergenic 55.0%
GGGGGGACGTTGTTGTAAGA+AGG + chr1_1:7441899-7441918 None:intergenic 55.0%
AGTTCGAAATCAGCGGTGGC+GGG + chr1_1:7441923-7441942 None:intergenic 55.0%
GAGTTCGAAATCAGCGGTGG+CGG + chr1_1:7441924-7441943 None:intergenic 55.0%
GGTCCGTTTGACGACATCAG+AGG + chr1_1:7442002-7442021 None:intergenic 55.0%
CAGGCTGAGTCTGGAGGTAA+TGG - chr1_1:7443485-7443504 Msa0005000:intron 55.0%
TTCAGTGGATGTGTCGCCTG+GGG + chr1_1:7444001-7444020 None:intergenic 55.0%
CTTTCAGTGGATGTGTCGCC+TGG + chr1_1:7444003-7444022 None:intergenic 55.0%
AGGGATGTCTGGGTTTCCTC+TGG - chr1_1:7445176-7445195 Msa0005000:intron 55.0%
TCCGGTGGTTACTCTCAGCA+AGG - chr1_1:7447137-7447156 Msa0005000:intron 55.0%
AGGTTGTTGAGAAGCGGCAG+GGG + chr1_1:7447195-7447214 None:intergenic 55.0%
CAGGTTGTTGAGAAGCGGCA+GGG + chr1_1:7447196-7447215 None:intergenic 55.0%
GGCTGTGCATAGCCATAACC+AGG + chr1_1:7447215-7447234 None:intergenic 55.0%
GGTTATGGCTATGCACAGCC+TGG - chr1_1:7447215-7447234 Msa0005000:CDS 55.0%
GTGCCTCAGCAAGCTTATGC+AGG - chr1_1:7447269-7447288 Msa0005000:CDS 55.0%
!! TGCAGTGGACTGGTCCCAAT+TGG + chr1_1:7447327-7447346 None:intergenic 55.0%
CCAGGATTCTGCTGTTGCTG+AGG + chr1_1:7447389-7447408 None:intergenic 55.0%
CCTCAGCAACAGCAGAATCC+TGG - chr1_1:7447386-7447405 Msa0005000:CDS 55.0%
CAGCAACAGCAGAATCCTGG+TGG - chr1_1:7447389-7447408 Msa0005000:CDS 55.0%
TAAGCAGTCCCATCAGCTGG+AGG + chr1_1:7447422-7447441 None:intergenic 55.0%
! CCCCGGTTGGTTATAACCAG+CGG + chr1_1:7447465-7447484 None:intergenic 55.0%
! CCGCTGGTTATAACCAACCG+GGG - chr1_1:7447462-7447481 Msa0005000:intron 55.0%
TGGTTATAACCAACCGGGGC+AGG - chr1_1:7447466-7447485 Msa0005000:intron 55.0%
GAGAATATACCTGCCCCGGT+TGG + chr1_1:7447478-7447497 None:intergenic 55.0%
ACCGGGGCAGGTATATTCTC+AGG - chr1_1:7447478-7447497 Msa0005000:intron 55.0%
GGCTGAGCATACCCTGATTG+TGG + chr1_1:7447530-7447549 None:intergenic 55.0%
TATGGCTCAGCCCCAAGCTA+TGG - chr1_1:7447575-7447594 Msa0005000:intron 55.0%
ATGGCTCAGCCCCAAGCTAT+GGG - chr1_1:7447576-7447595 Msa0005000:intron 55.0%
! CAGCATTTGGGCTAGGCTGT+TGG + chr1_1:7447700-7447719 None:intergenic 55.0%
GCTGCCAACTATCCACCACA+AGG - chr1_1:7447716-7447735 Msa0005000:intron 55.0%
!! AGCCCCTTGTGGTGGATAGT+TGG + chr1_1:7447723-7447742 None:intergenic 55.0%
GGGCTGCTCAGCCAAGTTAT+GGG - chr1_1:7447738-7447757 Msa0005000:intron 55.0%
GGCTGCTCAGCCAAGTTATG+GGG - chr1_1:7447739-7447758 Msa0005000:intron 55.0%
GTTGGCGGTACCCCATAACT+TGG + chr1_1:7447752-7447771 None:intergenic 55.0%
! TATGCTGCTTGGGAGGTTGG+CGG + chr1_1:7447767-7447786 None:intergenic 55.0%
! CCATATGCTGCTTGGGAGGT+TGG + chr1_1:7447770-7447789 None:intergenic 55.0%
CCAACCTCCCAAGCAGCATA+TGG - chr1_1:7447767-7447786 Msa0005000:intron 55.0%
GTTGGCTGCCATATGCTGCT+TGG + chr1_1:7447778-7447797 None:intergenic 55.0%
! TATGCAGGCGGAGTACCACT+TGG + chr1_1:7447842-7447861 None:intergenic 55.0%
AGTGGTACTCCGCCTGCATA+CGG - chr1_1:7447842-7447861 Msa0005000:intron 55.0%
CAGTCACCTAATGCTGCTGG+AGG - chr1_1:7447872-7447891 Msa0005000:intron 55.0%
GCTGGAGGTTATGGTCAACC+TGG - chr1_1:7447887-7447906 Msa0005000:intron 55.0%
ATATCCAGAAGGAGGGGGCT+GGG + chr1_1:7447924-7447943 None:intergenic 55.0%
AATATCCAGAAGGAGGGGGC+TGG + chr1_1:7447925-7447944 None:intergenic 55.0%
! GCTCTTTGAGAGCCTGCTTC+TGG + chr1_1:7447953-7447972 None:intergenic 55.0%
GGAGGACCATAACCAGAAGG+TGG + chr1_1:7447977-7447996 None:intergenic 55.0%
GACGGAGGACCATATGATGG+AGG + chr1_1:7447995-7448014 None:intergenic 55.0%
!! CCTGCAGGAGCACCATATGA+CGG + chr1_1:7448013-7448032 None:intergenic 55.0%
TCATATGGTGCTCCTGCAGG+CGG - chr1_1:7448013-7448032 Msa0005000:intron 55.0%
CGGTCAACCTGGTTATGGTC+AGG - chr1_1:7448033-7448052 Msa0005000:intron 55.0%
TGTGGTGCCTGACCATAACC+AGG + chr1_1:7448043-7448062 None:intergenic 55.0%
GGTTATGGTCAGGCACCACA+TGG - chr1_1:7448043-7448062 Msa0005000:intron 55.0%
CAGGCACCACATGGTTCCTA+TGG - chr1_1:7448052-7448071 Msa0005000:intron 55.0%
CCAGCACCATAGGAACCATG+TGG + chr1_1:7448061-7448080 None:intergenic 55.0%
CCACATGGTTCCTATGGTGC+TGG - chr1_1:7448058-7448077 Msa0005000:intron 55.0%
GCCCCAGCATATTCTGCTGA+TGG - chr1_1:7448091-7448110 Msa0005000:CDS 55.0%
AATGCAAGTGGGAATGCCCG+TGG - chr1_1:7448115-7448134 Msa0005000:CDS 55.0%
! CTATGATGGAGCACCTGCAC+AGG - chr1_1:7448144-7448163 Msa0005000:CDS 55.0%
GTGGTTCGTGAGTGAGGAGG+TGG + chr1_1:7441851-7441870 None:intergenic 60.0%
CCTCCTCACTCACGAACCAC+CGG - chr1_1:7441851-7441870 Msa0005000:three_prime_UTR 60.0%
!! CGAACCACCGGTTTCTCCGA+CGG - chr1_1:7441863-7441882 Msa0005000:three_prime_UTR 60.0%
AGGAGGTCCGTCGGAGAAAC+CGG + chr1_1:7441873-7441892 None:intergenic 60.0%
AGAAGGAGGAGGAGGTCCGT+CGG + chr1_1:7441882-7441901 None:intergenic 60.0%
GACGACATCAGAGGGAGCAG+CGG + chr1_1:7441993-7442012 None:intergenic 60.0%
CGACGAATGACTGGACAGGG+TGG - chr1_1:7443518-7443537 Msa0005000:intron 60.0%
TCGCCTGGGGGAAGATGAAG+AGG + chr1_1:7443988-7444007 None:intergenic 60.0%
TCAGTGGATGTGTCGCCTGG+GGG + chr1_1:7444000-7444019 None:intergenic 60.0%
GGTTGTTGAGAAGCGGCAGG+GGG + chr1_1:7447194-7447213 None:intergenic 60.0%
CCAGGTTGTTGAGAAGCGGC+AGG + chr1_1:7447197-7447216 None:intergenic 60.0%
! CCTGCCGCTTCTCAACAACC+TGG - chr1_1:7447194-7447213 Msa0005000:CDS 60.0%
GTTGGACCAGGGTATGCTCC+AGG + chr1_1:7447236-7447255 None:intergenic 60.0%
GGTTATCCTCCCCACTCAGC+TGG - chr1_1:7447290-7447309 Msa0005000:CDS 60.0%
TATCCTCCCCACTCAGCTGG+TGG - chr1_1:7447293-7447312 Msa0005000:CDS 60.0%
TATCCACCAGCTGAGTGGGG+AGG + chr1_1:7447299-7447318 None:intergenic 60.0%
AGACTGCTGGGCAGTTGCAG+TGG + chr1_1:7447342-7447361 None:intergenic 60.0%
GTCCTGCACCTCCAGCTGAT+GGG - chr1_1:7447411-7447430 Msa0005000:CDS 60.0%
GGGGCTGCTCAGCCAAGTTA+TGG - chr1_1:7447737-7447756 Msa0005000:intron 60.0%
! GCTGCCATATGCTGCTTGGG+AGG + chr1_1:7447774-7447793 None:intergenic 60.0%
!! GCAGGAGCACCATATGACGG+AGG + chr1_1:7448010-7448029 None:intergenic 60.0%
CCGTCATATGGTGCTCCTGC+AGG - chr1_1:7448010-7448029 Msa0005000:intron 60.0%
! TAACCAGGTTGACCGCCTGC+AGG + chr1_1:7448028-7448047 None:intergenic 60.0%
GCAGGCGGTCAACCTGGTTA+TGG - chr1_1:7448028-7448047 Msa0005000:intron 60.0%
GCAGAATATGCTGGGGCCTG+AGG + chr1_1:7448088-7448107 None:intergenic 60.0%
GCCCGTGGTGGTAGCTATGA+TGG - chr1_1:7448130-7448149 Msa0005000:CDS 60.0%
CCGGTGGTTCGTGAGTGAGG+AGG + chr1_1:7441854-7441873 None:intergenic 65.0%
AGGTCCGTCGGAGAAACCGG+TGG + chr1_1:7441870-7441889 None:intergenic 65.0%
!! AAATCAGCGGTGGCGGGAGG+GGG + chr1_1:7441917-7441936 None:intergenic 65.0%
!! GAAATCAGCGGTGGCGGGAG+GGG + chr1_1:7441918-7441937 None:intergenic 65.0%
!! CGAAATCAGCGGTGGCGGGA+GGG + chr1_1:7441919-7441938 None:intergenic 65.0%
!! TCGAAATCAGCGGTGGCGGG+AGG + chr1_1:7441920-7441939 None:intergenic 65.0%
GGCACCAGAGAGGAGACGAG+CGG + chr1_1:7441972-7441991 None:intergenic 65.0%
! GGGAGAGGGTGTGCTTCTGC+TGG - chr1_1:7446856-7446875 Msa0005000:intron 65.0%
AGCTAGAGGGTGGCCGAGCT+TGG + chr1_1:7447166-7447185 None:intergenic 65.0%
AAGCTCGGCCACCCTCTAGC+TGG - chr1_1:7447165-7447184 Msa0005000:CDS 65.0%
AGCTCGGCCACCCTCTAGCT+GGG - chr1_1:7447166-7447185 Msa0005000:CDS 65.0%
GCACAGCCTGGAGCATACCC+TGG - chr1_1:7447227-7447246 Msa0005000:CDS 65.0%
GCTGGGCAGTTGCAGTGGAC+TGG + chr1_1:7447337-7447356 None:intergenic 65.0%
GGTCCTGCACCTCCAGCTGA+TGG - chr1_1:7447410-7447429 Msa0005000:CDS 65.0%
! GTCCCATCAGCTGGAGGTGC+AGG + chr1_1:7447416-7447435 None:intergenic 65.0%
CTTGGCTGAGCAGCCCCTTG+TGG + chr1_1:7447734-7447753 None:intergenic 65.0%
GGCTGGGAAGGAGGATACCC+AGG + chr1_1:7447908-7447927 None:intergenic 65.0%
GCAAGTGGGAATGCCCGTGG+TGG - chr1_1:7448118-7448137 Msa0005000:CDS 65.0%
ACCTGCACAGGGAGCTCAGC+AGG - chr1_1:7448156-7448175 Msa0005000:CDS 65.0%
!! AATCAGCGGTGGCGGGAGGG+GGG + chr1_1:7441916-7441935 None:intergenic 70.0%
GTCGCCGCTCGTCTCCTCTC+TGG - chr1_1:7441965-7441984 Msa0005000:CDS 70.0%
AGGGAGCAGCGGCACCAGAG+AGG + chr1_1:7441982-7442001 None:intergenic 70.0%
GCAGGGGGAGCCCAGCTAGA+GGG + chr1_1:7447179-7447198 None:intergenic 70.0%
! GCTGGAGGTGCAGGACCACC+AGG + chr1_1:7447407-7447426 None:intergenic 70.0%
GGCTGAGCAGCCCCTTGTGG+TGG + chr1_1:7447731-7447750 None:intergenic 70.0%
GAAGGAGGGGGCTGGGAAGG+AGG + chr1_1:7447917-7447936 None:intergenic 70.0%
CCAGAAGGAGGGGGCTGGGA+AGG + chr1_1:7447920-7447939 None:intergenic 70.0%
CCTTCCCAGCCCCCTCCTTC+TGG - chr1_1:7447917-7447936 Msa0005000:intron 70.0%
GCTCCTGCAGGCGGTCAACC+TGG - chr1_1:7448022-7448041 Msa0005000:intron 70.0%
GCCTGCTGAGCTCCCTGTGC+AGG + chr1_1:7448160-7448179 None:intergenic 70.0%
GGGGGAGCCCAGCTAGAGGG+TGG + chr1_1:7447176-7447195 None:intergenic 75.0%
GGCAGGGGGAGCCCAGCTAG+AGG + chr1_1:7447180-7447199 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 7441686 7448438 7441686 ID=Msa0005000;Name=Msa0005000
chr1_1 mRNA 7441686 7448438 7441686 ID=Msa0005000-mRNA-1;Parent=Msa0005000;Name=Msa0005000-mRNA-1;_AED=0.29;_eAED=0.29;_QI=99|1|1|1|1|1|6|231|642
chr1_1 exon 7441686 7443011 7441686 ID=Msa0005000-mRNA-1:exon:2649;Parent=Msa0005000-mRNA-1
chr1_1 exon 7446026 7446145 7446026 ID=Msa0005000-mRNA-1:exon:2648;Parent=Msa0005000-mRNA-1
chr1_1 exon 7446369 7446440 7446369 ID=Msa0005000-mRNA-1:exon:2647;Parent=Msa0005000-mRNA-1
chr1_1 exon 7446547 7446636 7446547 ID=Msa0005000-mRNA-1:exon:2646;Parent=Msa0005000-mRNA-1
chr1_1 exon 7447159 7447433 7447159 ID=Msa0005000-mRNA-1:exon:2645;Parent=Msa0005000-mRNA-1
chr1_1 exon 7448063 7448438 7448063 ID=Msa0005000-mRNA-1:exon:2644;Parent=Msa0005000-mRNA-1
chr1_1 five_prime_UTR 7448340 7448438 7448340 ID=Msa0005000-mRNA-1:five_prime_utr;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7448063 7448339 7448063 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7447159 7447433 7447159 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7446547 7446636 7446547 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7446369 7446440 7446369 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7446026 7446145 7446026 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 CDS 7441917 7443011 7441917 ID=Msa0005000-mRNA-1:cds;Parent=Msa0005000-mRNA-1
chr1_1 three_prime_UTR 7441686 7441916 7441686 ID=Msa0005000-mRNA-1:three_prime_utr;Parent=Msa0005000-mRNA-1
Gene Sequence

>Msa0005000

ATGGCTGACGAATCGCAATACGACTCAACTCCACCTTCCCTGAAACGCAAGTACGACGAACAGCCACCTCCTCACTCACGAACCACCGGTTTCTCCGACGGACCTCCTCCTCCTTCTTACAACAACGTCCCCCCTCCCGCCACCGCTGATTTCGAACTCATCAAACAACGCGCTCAACAAGTCGCCGCTCGTCTCCTCTCTGGTGCCGCTGCTCCCTCTGATGTCGTCAAACGGACCAAATTCGACAACGGTCCTCCTTCCCCTTACGATTCATCAGATTTGAAGAGTCAATATGCAGCTCCTATGAGTATACCTTCGTATTCGCATCAAGGGTCAAGCAAGAAGATTGAAATCCCTAATGGAAGGGTTGGTGTTATTATTGGAAAAGGTGGAGAAACTATCAAGTATCTTCAGTTGCAATCTGGTGCAAAAATCCAAGTTACCCGTGATATGGATGCTGATCCTAATTCTCCAAATAGATTAGTTGAGCTTACTGGTACTTCTGATGCTATTGCTACTGCTGAGAAACTCATCAATGAAGTTCTTGCTGAGGCTGAGTCTGGAGGTAATGGACTTGTTACTCGACGAATGACTGGACAGGGTGGCGCTGATGAGTTTTCCATGAAGATTCCAAATAACAAGGTTGGTCTTATAATCGGTAAAGGTGGAGAAACGATAAAGAGTATGCAAGCTACAACTGGAGCAAGAATTCAGGTGATTCCTCTTCATCTTCCCCCAGGCGACACATCCACTGAAAGAACATTAAAAATTGAAGGGACCTCTGAACAAATTGAATCTGCAAAACAATTGGTTGATTCAATCCTCAGTGGCGAGAATCGTCTTAGAAATCCATCAATGTCCGGTGGTTACTCTCAGCAAGGTTACCAAGCTCGGCCACCCTCTAGCTGGGCTCCCCCTGCCGCTTCTCAACAACCTGGTTATGGCTATGCACAGCCTGGAGCATACCCTGGTCCAACTTCCCAGTACAATGTGCCTCAGCAAGCTTATGCAGGTTATCCTCCCCACTCAGCTGGTGGATATTCTACCAATTGGGACCAGTCCACTGCAACTGCCCAGCAGTCTACCTATGATTATTATAATCAACAGCCTCAGCAACAGCAGAATCCTGGTGGTCCTGCACCTCCAGCTGATGGGACTGCTTACAATTACAATCAACCACCATCCGCTGGTTATAACCAACCGGGGCAGGTATATTCTCAGGATGGCTATGGTGCATATCAACAACCACCACAATCAGGGTATGCTCAGCCAACATCATATGATCAGCAGCAAATCTATGGCTCAGCCCCAAGCTATGGGTCAGCTCAAGAGGGCCAAACTACCACCAACTATGGATCAAAAGGGGATTCAACCCAAGTTCCACCTGTCCAACCTTCACAACAAGGTTATGGTAGCAGCCAACAGCCTAGCCCAAATGCTGCCAACTATCCACCACAAGGGGCTGCTCAGCCAAGTTATGGGGTACCGCCAACCTCCCAAGCAGCATATGGCAGCCAACCTCAAACACAGTCTGGTTATGGACCCCCTCAAACTCAAAAGCCAAGTGGTACTCCGCCTGCATACGGACAATCACAGTCACCTAATGCTGCTGGAGGTTATGGTCAACCTGGGTATCCTCCTTCCCAGCCCCCTCCTTCTGGATATTCCCAACCAGAAGCAGGCTCTCAAAGAGCACCACCTTCTGGTTATGGTCCTCCATCATATGGTCCTCCGTCATATGGTGCTCCTGCAGGCGGTCAACCTGGTTATGGTCAGGCACCACATGGTTCCTATGGTGCTGGTTATCCTCAGGCCCCAGCATATTCTGCTGATGGTAATGCAAGTGGGAATGCCCGTGGTGGTAGCTATGATGGAGCACCTGCACAGGGAGCTCAGCAGGCTAGTGTTGCTAAGTCACCTCAGAGCTGA
Protein sequence

>Msa0005000

MADESQYDSTPPSLKRKYDEQPPPHSRTTGFSDGPPPPSYNNVPPPATADFELIKQRAQQVAARLLSGAAAPSDVVKRTKFDNGPPSPYDSSDLKSQYAAPMSIPSYSHQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATAEKLINEVLAEAESGGNGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESAKQLVDSILSGENRLRNPSMSGGYSQQGYQARPPSSWAPPAASQQPGYGYAQPGAYPGPTSQYNVPQQAYAGYPPHSAGGYSTNWDQSTATAQQSTYDYYNQQPQQQQNPGGPAPPADGTAYNYNQPPSAGYNQPGQVYSQDGYGAYQQPPQSGYAQPTSYDQQQIYGSAPSYGSAQEGQTTTNYGSKGDSTQVPPVQPSQQGYGSSQQPSPNAANYPPQGAAQPSYGVPPTSQAAYGSQPQTQSGYGPPQTQKPSGTPPAYGQSQSPNAAGGYGQPGYPPSQPPPSGYSQPEAGSQRAPPSGYGPPSYGPPSYGAPAGGQPGYGQAPHGSYGAGYPQAPAYSADGNASGNARGGSYDGAPAQGAQQASVAKSPQS*