AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036300 MtrunA17_Chr7g0260601 94.587 702 19 2 1 684 1 701 0.0 1363
Msa1036300 MtrunA17_Chr4g0031821 74.487 682 140 7 2 671 107 766 0.0 992
Msa1036300 MtrunA17_Chr7g0248361 72.526 677 145 10 1 671 1 642 0.0 953
Msa1036300 MtrunA17_Chr6g0476861 73.383 665 136 8 14 671 16 646 0.0 944
Msa1036300 MtrunA17_Chr3g0094871 81.081 444 68 3 223 665 11 439 0.0 728
Msa1036300 MtrunA17_Chr1g0168321 63.366 606 120 6 1 603 1 507 0.0 722
Msa1036300 MtrunA17_Chr3g0143721 50.000 452 210 6 223 662 249 696 2.81e-147 445
Msa1036300 MtrunA17_Chr2g0297281 48.330 449 217 9 223 662 286 728 1.85e-135 416
Msa1036300 MtrunA17_Chr4g0052411 48.222 450 217 9 223 662 229 672 4.24e-134 410
Msa1036300 MtrunA17_Chr7g0217421 53.022 364 163 6 214 574 30 388 1.91e-126 380
Msa1036300 MtrunA17_Chr5g0429571 45.682 440 223 6 223 647 313 751 1.14e-114 363
Msa1036300 MtrunA17_Chr1g0158881 43.043 460 234 8 220 673 326 763 4.72e-112 355
Msa1036300 MtrunA17_Chr3g0135721 43.274 446 233 8 214 653 215 646 1.36e-110 350
Msa1036300 MtrunA17_Chr3g0104211 48.549 379 186 4 223 593 304 681 3.70e-110 351
Msa1036300 MtrunA17_Chr3g0135761 43.807 436 223 9 225 653 224 644 6.04e-109 345
Msa1036300 MtrunA17_Chr8g0362771 40.940 447 243 7 214 653 228 660 2.09e-107 342
Msa1036300 MtrunA17_Chr5g0432631 41.741 448 240 8 213 653 219 652 1.90e-105 340
Msa1036300 MtrunA17_Chr5g0432641 39.588 437 241 9 225 653 193 614 1.94e-91 298
Msa1036300 MtrunA17_Chr6g0456351 50.549 273 131 2 213 485 307 575 1.24e-82 273
Msa1036300 MtrunA17_Chr2g0331161 38.427 445 254 7 223 662 415 844 6.37e-80 272
Msa1036300 MtrunA17_Chr8g0388371 41.257 366 189 6 218 564 399 757 3.88e-76 262
Msa1036300 MtrunA17_Chr3g0129971 30.106 661 385 20 63 682 124 748 2.53e-67 236
Msa1036300 MtrunA17_Chr4g0050561 40.684 263 141 3 228 483 161 415 6.05e-58 201
Msa1036300 MtrunA17_Chr8g0392981 79.832 119 24 0 545 663 1 119 4.22e-57 189
Msa1036300 MtrunA17_Chr8g0345461 40.520 269 152 4 210 475 152 415 6.11e-57 199
Msa1036300 MtrunA17_Chr8g0392971 85.294 102 15 0 435 536 51 152 2.05e-55 186
Msa1036300 MtrunA17_Chr3g0135781 53.488 172 76 2 214 385 46 213 1.05e-54 186
Msa1036300 MtrunA17_Chr1g0200081 40.149 269 152 5 210 475 162 424 1.38e-54 193
Msa1036300 MtrunA17_Chr1g0182711 42.972 249 134 4 225 470 190 433 1.27e-52 188
Msa1036300 MtrunA17_Chr7g0262801 42.972 249 134 4 225 470 189 432 4.47e-52 186
Msa1036300 MtrunA17_Chr3g0145011 41.129 248 142 3 223 469 139 383 1.16e-51 184
Msa1036300 MtrunA17_Chr4g0014731 39.286 252 145 4 218 466 163 409 1.91e-51 184
Msa1036300 MtrunA17_Chr1g0192151 39.286 252 145 4 218 466 162 408 1.96e-51 184
Msa1036300 MtrunA17_Chr3g0141901 40.726 248 143 3 223 469 136 380 4.85e-51 182
Msa1036300 MtrunA17_Chr8g0357301 29.801 453 267 12 240 650 487 930 8.24e-51 191
Msa1036300 MtrunA17_Chr7g0255721 39.114 271 151 6 222 485 684 947 1.82e-49 186
Msa1036300 MtrunA17_Chr7g0255721 41.206 199 110 4 254 451 416 608 2.74e-30 127
Msa1036300 MtrunA17_Chr1g0180791 42.609 230 128 3 223 451 478 704 4.23e-49 184
Msa1036300 MtrunA17_Chr1g0180791 39.716 282 143 7 204 466 187 460 2.72e-48 182
Msa1036300 MtrunA17_Chr2g0327121 42.000 250 135 5 204 451 189 430 5.59e-49 184
Msa1036300 MtrunA17_Chr2g0327121 41.739 230 130 3 223 451 480 706 6.11e-47 178
Msa1036300 MtrunA17_Chr7g0264521 42.544 228 127 3 225 451 481 705 1.62e-48 182
Msa1036300 MtrunA17_Chr7g0264521 41.365 249 138 5 204 451 188 429 7.49e-47 177
Msa1036300 MtrunA17_Chr7g0255641 37.545 277 159 6 222 491 657 926 4.87e-48 182
Msa1036300 MtrunA17_Chr7g0255641 40.000 195 108 6 261 454 432 618 2.98e-28 121
Msa1036300 MtrunA17_Chr5g0432391 33.154 371 217 10 294 653 72 422 4.19e-47 172
Msa1036300 MtrunA17_Chr7g0255651 40.948 232 131 4 222 451 281 508 1.32e-46 174
Msa1036300 MtrunA17_Chr7g0255651 30.317 221 143 4 236 451 27 241 8.65e-19 90.5
Msa1036300 MtrunA17_Chr3g0108321 45.876 194 99 3 220 410 156 346 1.72e-46 169
Msa1036300 MtrunA17_Chr2g0277831 41.991 231 124 3 225 451 245 469 4.66e-43 166
Msa1036300 MtrunA17_Chr2g0277831 39.474 228 133 2 223 449 533 756 2.87e-42 164
Msa1036300 MtrunA17_Chr7g0255691 39.344 244 139 5 222 461 285 523 9.62e-43 162
Msa1036300 MtrunA17_Chr7g0255691 36.100 241 131 8 228 456 22 251 5.03e-26 113
Msa1036300 MtrunA17_Chr7g0255901 35.345 232 145 4 222 451 638 866 1.09e-38 154
Msa1036300 MtrunA17_Chr4g0026631 41.410 227 119 8 220 442 124 340 4.66e-38 147
Msa1036300 MtrunA17_Chr2g0321241 41.850 227 118 8 220 442 129 345 5.29e-38 147
Msa1036300 MtrunA17_Chr3g0086411 35.165 273 147 6 223 469 215 483 1.31e-36 144
Msa1036300 MtrunA17_Chr3g0086411 35.333 150 80 3 310 449 7 149 8.32e-17 84.0
Msa1036300 MtrunA17_Chr8g0387641 36.638 232 137 5 223 451 521 745 3.12e-36 146
Msa1036300 MtrunA17_Chr4g0038101 37.281 228 132 6 223 446 721 941 3.87e-36 146
Msa1036300 MtrunA17_Chr4g0033451 36.719 256 147 6 223 469 380 629 1.16e-35 144
Msa1036300 MtrunA17_Chr2g0327231 43.827 162 89 2 223 383 346 506 1.79e-35 140
Msa1036300 MtrunA17_Chr2g0327231 36.111 108 65 2 204 311 135 238 1.59e-12 70.5
Msa1036300 MtrunA17_Chr1g0190401 40.000 200 116 3 209 406 663 860 3.11e-35 143
Msa1036300 MtrunA17_Chr4g0004121 38.431 255 132 8 223 464 242 484 4.27e-35 140
Msa1036300 MtrunA17_Chr3g0086401 34.564 298 153 7 223 492 385 668 8.78e-35 140
Msa1036300 MtrunA17_Chr3g0086401 37.339 233 129 6 216 438 84 309 1.27e-32 134
Msa1036300 MtrunA17_Chr4g0043381 34.513 226 141 3 225 449 839 1058 1.12e-34 141
Msa1036300 MtrunA17_Chr6g0462581 37.069 232 135 6 223 451 500 723 2.14e-34 140
Msa1036300 MtrunA17_Chr1g0202381 36.245 229 134 6 222 446 467 687 1.44e-33 137
Msa1036300 MtrunA17_Chr3g0127401 37.395 238 127 8 223 451 81 305 1.67e-33 132
Msa1036300 MtrunA17_Chr1g0202371 36.842 228 131 7 223 446 397 615 2.87e-33 136
Msa1036300 MtrunA17_Chr5g0397121 35.345 232 140 6 223 451 513 737 5.55e-33 135
Msa1036300 MtrunA17_Chr1g0204031 36.325 234 137 7 222 451 556 781 6.15e-33 135
Msa1036300 MtrunA17_Chr2g0316851 34.766 256 154 6 204 451 573 823 7.98e-33 136
Msa1036300 MtrunA17_Chr3g0127431 35.565 239 130 8 223 451 84 308 9.49e-33 130
Msa1036300 MtrunA17_Chr4g0052271 38.528 231 133 7 223 451 119 342 1.31e-32 130
Msa1036300 MtrunA17_Chr3g0135791 32.599 227 145 4 430 653 19 240 1.01e-31 125
Msa1036300 MtrunA17_Chr1g0195731 36.481 233 137 6 223 451 934 1159 1.08e-31 132
Msa1036300 MtrunA17_Chr1g0195741 36.481 233 137 6 223 451 938 1163 2.03e-31 131
Msa1036300 MtrunA17_Chr3g0116131 36.404 228 134 6 223 446 902 1122 2.43e-30 128
Msa1036300 MtrunA17_Chr6g0459561 37.238 239 132 10 215 447 376 602 3.99e-29 123
Msa1036300 MtrunA17_Chr7g0246111 35.146 239 140 7 218 451 207 435 4.24e-29 122
Msa1036300 MtrunA17_Chr4g0047411 38.095 210 115 5 248 445 202 408 8.68e-29 122
Msa1036300 MtrunA17_Chr6g0459541 31.429 280 156 9 198 447 14 287 5.60e-27 112
Msa1036300 MtrunA17_Chr2g0289231 32.083 240 136 7 219 445 293 518 9.79e-23 102
Msa1036300 MtrunA17_Chr6g0459551 36.082 194 104 7 218 405 97 276 1.51e-21 97.8
Msa1036300 MtrunA17_Chr3g0135741 35.714 126 79 2 426 550 13 137 1.05e-16 77.8
Msa1036300 MtrunA17_Chr5g0432671 44.231 104 51 4 426 528 3 100 1.30e-15 73.2
Msa1036300 MtrunA17_Chr6g0459531 26.761 284 157 11 181 447 11 260 2.00e-14 75.1
Msa1036300 MtrunA17_Chr4g0062081 42.308 78 43 2 226 301 10 87 5.54e-13 65.5
Msa1036300 MtrunA17_Chr2g0315911 29.843 191 121 5 225 410 206 388 5.64e-13 71.6
Msa1036300 MtrunA17_Chr8g0372701 34.010 197 112 9 225 414 224 409 6.65e-13 71.6
Msa1036300 MtrunA17_Chr2g0315971 30.994 171 106 5 244 410 217 379 2.04e-12 70.5
Msa1036300 MtrunA17_Chr5g0404651 32.474 194 112 8 225 410 216 398 1.13e-11 67.8
Msa1036300 MtrunA17_Chr2g0315991 27.749 191 125 5 225 410 199 381 1.43e-11 67.4
Msa1036300 MtrunA17_Chr6g0452361 32.121 165 97 6 235 392 6 162 7.30e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036300 AT1G07510.1 75.469 640 136 4 46 672 140 771 0.0 970
Msa1036300 AT2G29080.1 72.182 683 157 6 7 671 99 766 0.0 951
Msa1036300 AT1G50250.1 49.558 452 212 6 223 662 259 706 1.67e-145 441
Msa1036300 AT5G42270.1 49.779 452 211 6 223 662 247 694 1.36e-144 438
Msa1036300 AT5G15250.1 48.626 473 226 11 200 662 199 664 5.64e-137 418
Msa1036300 AT2G30950.1 48.998 449 214 9 223 662 224 666 3.20e-135 414
Msa1036300 AT2G30950.2 48.998 449 214 9 223 662 224 666 3.20e-135 414
Msa1036300 AT2G30950.3 48.998 449 214 9 223 662 224 666 3.20e-135 414
Msa1036300 AT2G30950.4 48.998 449 214 9 223 662 228 670 4.39e-135 413
Msa1036300 AT1G06430.1 48.775 449 215 9 223 662 217 659 1.15e-134 412
Msa1036300 AT1G06430.3 48.775 449 215 9 223 662 217 659 1.15e-134 412
Msa1036300 AT1G06430.2 48.775 449 215 9 223 662 217 659 1.15e-134 412
Msa1036300 AT5G53170.1 44.843 446 226 6 220 662 356 784 9.18e-117 369
Msa1036300 AT2G26140.1 44.931 434 221 7 225 653 226 646 1.24e-116 366
Msa1036300 AT3G47060.1 43.606 477 238 8 168 615 250 724 7.37e-114 361
Msa1036300 AT5G58870.1 48.662 411 195 6 223 620 326 733 8.28e-114 361
Msa1036300 AT5G15250.2 50.779 321 130 5 200 497 199 514 8.64e-100 316
Msa1036300 AT3G02450.1 53.150 254 115 1 223 476 331 580 1.91e-82 273
Msa1036300 AT4G23940.1 35.714 476 257 10 218 652 422 889 1.66e-76 264
Msa1036300 AT3G16290.1 36.364 451 255 9 223 662 407 836 2.01e-75 260
Msa1036300 AT5G64580.1 43.421 304 164 4 206 502 296 598 2.59e-64 229
Msa1036300 AT5G19990.2 40.377 265 143 3 228 485 105 361 9.00e-58 200
Msa1036300 AT5G19990.1 40.684 263 141 3 228 483 163 417 3.74e-57 200
Msa1036300 AT5G19990.3 40.684 263 141 3 228 483 163 417 3.74e-57 200
Msa1036300 AT5G20000.1 40.684 263 141 3 228 483 163 417 4.19e-57 200
Msa1036300 AT1G53750.1 40.520 269 152 4 210 475 152 415 1.29e-56 199
Msa1036300 AT1G53780.3 39.326 267 158 3 210 475 323 586 2.33e-54 196
Msa1036300 AT1G53780.1 39.326 267 158 3 210 475 324 587 2.39e-54 196
Msa1036300 AT1G53780.4 39.326 267 158 3 210 475 324 587 2.39e-54 196
Msa1036300 AT1G53780.2 39.326 267 158 3 210 475 345 608 2.94e-54 197
Msa1036300 AT1G79560.1 28.433 517 305 16 219 683 486 989 1.25e-52 196
Msa1036300 AT4G29040.1 42.570 249 135 4 225 470 187 430 3.83e-52 187
Msa1036300 AT2G20140.1 42.570 249 135 4 225 470 187 430 5.29e-52 186
Msa1036300 AT1G79560.3 31.311 412 242 11 219 598 486 888 7.52e-52 194
Msa1036300 AT1G79560.2 28.210 514 307 15 219 683 486 986 9.66e-52 194
Msa1036300 AT3G05530.1 39.286 252 145 4 218 466 163 409 2.07e-51 184
Msa1036300 AT5G43010.1 40.323 248 144 3 223 469 136 380 3.76e-51 183
Msa1036300 AT1G45000.1 40.323 248 144 3 223 469 136 380 4.56e-51 182
Msa1036300 AT3G56690.1 40.551 254 138 5 222 469 720 966 7.17e-51 191
Msa1036300 AT3G56690.1 42.714 199 107 4 254 451 413 605 2.41e-37 150
Msa1036300 AT5G58290.1 41.200 250 133 5 220 463 149 390 8.27e-51 182
Msa1036300 AT1G09100.1 38.095 252 148 4 218 466 162 408 1.77e-49 179
Msa1036300 AT3G53230.1 41.739 230 130 3 223 451 478 704 1.14e-47 181
Msa1036300 AT3G53230.1 38.078 281 149 6 204 466 187 460 1.88e-46 177
Msa1036300 AT5G03340.1 40.870 230 132 3 223 451 477 703 2.40e-47 179
Msa1036300 AT5G03340.1 39.700 267 149 6 204 466 186 444 5.54e-47 178
Msa1036300 AT3G09840.1 39.700 267 149 6 204 466 186 444 8.89e-47 178
Msa1036300 AT3G09840.1 40.000 230 135 2 223 451 477 704 2.91e-44 170
Msa1036300 AT2G03670.1 36.032 247 153 3 222 465 282 526 6.39e-40 155
Msa1036300 AT2G03670.1 34.940 249 145 7 227 465 23 264 3.20e-30 126
Msa1036300 AT3G01610.2 40.517 232 115 6 225 442 232 454 8.47e-40 157
Msa1036300 AT3G01610.2 35.897 273 151 7 223 478 525 790 5.80e-34 139
Msa1036300 AT3G01610.1 40.517 232 115 6 225 442 232 454 8.64e-40 157
Msa1036300 AT3G01610.1 35.897 273 151 7 223 478 525 790 5.19e-34 139
Msa1036300 AT1G03000.1 35.776 232 142 5 223 451 655 882 1.97e-37 150
Msa1036300 AT1G05910.1 35.985 264 156 5 223 479 378 635 8.77e-37 149
Msa1036300 AT1G64110.5 37.500 232 135 6 223 451 516 740 2.59e-36 146
Msa1036300 AT1G64110.3 37.500 232 135 6 223 451 516 740 2.59e-36 146
Msa1036300 AT1G64110.1 37.500 232 135 5 223 451 513 737 2.59e-36 146
Msa1036300 AT1G64110.2 37.500 232 135 5 223 451 518 742 2.63e-36 146
Msa1036300 AT1G64110.4 37.500 232 135 5 223 451 518 742 2.63e-36 146
Msa1036300 AT2G27600.1 39.474 228 122 9 220 442 126 342 3.00e-35 139
Msa1036300 AT3G04340.1 39.801 201 117 3 209 407 767 965 3.07e-35 144
Msa1036300 AT1G80350.1 37.838 259 136 8 218 463 231 477 7.76e-35 139
Msa1036300 AT4G28000.3 35.776 232 138 5 223 451 517 740 2.10e-34 140
Msa1036300 AT5G08470.3 36.052 233 128 5 225 449 834 1053 2.60e-34 140
Msa1036300 AT4G28000.2 35.776 232 138 5 223 451 517 740 2.68e-34 140
Msa1036300 AT5G08470.1 36.052 233 128 5 225 449 843 1062 2.87e-34 140
Msa1036300 AT4G28000.1 35.776 232 138 5 223 451 515 738 2.97e-34 140
Msa1036300 AT3G15120.2 39.224 232 128 6 225 449 728 953 5.44e-34 140
Msa1036300 AT5G52882.1 36.638 232 136 5 223 451 514 737 5.54e-34 139
Msa1036300 AT3G15120.1 39.224 232 128 6 225 449 718 943 6.31e-34 140
Msa1036300 AT1G50140.3 37.281 228 132 6 223 446 711 931 1.29e-33 138
Msa1036300 AT1G50140.1 37.281 228 132 6 223 446 711 931 1.29e-33 138
Msa1036300 AT1G50140.4 37.281 228 132 6 223 446 711 931 1.29e-33 138
Msa1036300 AT1G50140.2 37.281 228 132 6 223 446 689 909 1.32e-33 138
Msa1036300 AT1G50140.5 37.281 228 132 6 223 446 689 909 1.32e-33 138
Msa1036300 AT4G02480.1 31.457 302 170 7 223 494 960 1254 7.39e-33 136
Msa1036300 AT5G53540.1 36.864 236 131 8 223 451 84 308 1.65e-32 130
Msa1036300 AT3G19740.1 36.842 228 133 6 223 446 701 921 3.40e-32 134
Msa1036300 AT2G45500.4 34.137 249 141 8 218 457 75 309 2.66e-31 125
Msa1036300 AT2G45500.3 34.137 249 141 8 218 457 75 309 2.66e-31 125
Msa1036300 AT4G27680.1 37.712 236 129 8 223 451 81 305 2.76e-31 127
Msa1036300 AT2G34560.1 38.362 232 133 8 223 451 100 324 3.37e-31 126
Msa1036300 AT2G34560.2 38.362 232 133 8 223 451 109 333 4.53e-31 126
Msa1036300 AT2G03670.2 34.940 249 145 7 227 465 23 264 7.55e-31 126
Msa1036300 AT2G03670.2 36.429 140 88 1 222 360 282 421 3.08e-18 88.2
Msa1036300 AT2G45500.1 34.137 249 141 8 218 457 212 446 1.23e-30 126
Msa1036300 AT2G45500.2 34.137 249 141 8 218 457 208 442 1.43e-30 126
Msa1036300 AT2G45500.5 34.137 249 141 8 218 457 218 452 1.53e-30 126
Msa1036300 AT1G02890.1 30.132 302 174 7 223 494 941 1235 1.88e-30 129
Msa1036300 AT4G24860.1 35.965 228 135 6 223 446 817 1037 3.10e-30 128
Msa1036300 AT4G24860.3 35.965 228 135 6 223 446 815 1035 3.12e-30 128
Msa1036300 AT4G24860.2 35.965 228 135 6 223 446 813 1033 4.40e-30 127
Msa1036300 AT4G24860.4 35.965 228 135 6 223 446 790 1010 5.02e-30 127
Msa1036300 AT3G27120.1 35.391 243 141 7 211 447 388 620 2.78e-28 121
Msa1036300 AT4G04910.1 38.498 213 110 6 248 445 239 445 4.34e-28 120
Msa1036300 AT4G04180.2 30.952 252 149 8 204 445 296 532 8.61e-26 113
Msa1036300 AT4G04180.1 30.952 252 149 8 204 445 301 537 9.99e-26 112
Msa1036300 AT1G62130.2 33.333 231 125 7 223 446 743 951 4.08e-25 112
Msa1036300 AT1G62130.1 33.333 231 125 7 223 446 750 958 4.24e-25 112
Msa1036300 AT1G45000.2 40.288 139 81 2 223 360 136 273 5.04e-23 101
Msa1036300 AT1G02890.2 26.159 302 158 8 223 494 941 1207 6.90e-19 92.4
Msa1036300 AT5G08470.2 34.211 152 89 3 225 372 843 987 1.27e-18 91.3
Msa1036300 AT3G50930.1 33.696 184 93 8 225 392 264 434 3.94e-12 69.7
Msa1036300 AT3G28610.1 28.467 274 153 12 225 479 202 451 4.50e-12 69.3
Msa1036300 AT5G40000.1 26.966 267 163 9 225 478 206 453 1.14e-11 68.2
Msa1036300 AT3G28600.2 29.461 241 137 11 218 439 157 383 3.55e-11 66.2

Find 200 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATATTATTTCAATAT+TGG 0.141331 7_1:-72660694 Msa1036300:CDS
TTCAAATAAGTCATATATTA+TGG 0.151888 7_1:+72658856 None:intergenic
TAGAGTGAGAAACTTGTTTA+AGG 0.174086 7_1:-72660026 Msa1036300:CDS
GTTACCTATTCTTCTGAAAT+TGG 0.199385 7_1:-72660595 Msa1036300:CDS
GCAGCAGCAGATTAGCTTTC+AGG 0.211301 7_1:-72660899 Msa1036300:CDS
TTGGAATTCTTCTCAAATAT+TGG 0.229345 7_1:-72658711 Msa1036300:three_prime_UTR
CCAAGCTCTTGGTATTTCTT+AGG 0.233058 7_1:+72660199 None:intergenic
ATAAATATTATTTCAATATT+GGG 0.236143 7_1:-72660693 Msa1036300:CDS
ATATTATTCTTCTCAAATAT+TGG 0.237904 7_1:-72658775 Msa1036300:three_prime_UTR
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 7_1:-72659456 Msa1036300:CDS
CAGGTTTATCAATTGTTATT+TGG 0.261861 7_1:+72659771 None:intergenic
GAGAGTTCAAAACATATATC+TGG 0.273733 7_1:+72660809 None:intergenic
TTCCTTCACTTCATAAATTC+AGG 0.281074 7_1:-72662207 Msa1036300:intron
AGATGACTTGCTTCCAATCT+TGG 0.281284 7_1:-72658976 Msa1036300:CDS
ACCTCAGGCTCTATCATAAT+TGG 0.281315 7_1:+72658924 None:intergenic
TTTGGCATTTCTCATCTATA+TGG 0.293080 7_1:-72660530 Msa1036300:CDS
ACCCTTCCTGCGAAGGGATA+TGG 0.294128 7_1:-72660724 Msa1036300:CDS
GGAGTTTATGAATAAGCTTT+TGG 0.304203 7_1:-72660878 Msa1036300:CDS
TGAGGCAAAACAAGAAATTA+TGG 0.336127 7_1:-72660245 Msa1036300:CDS
GCTCTTCTGGTGGGTCCTCC+AGG 0.336675 7_1:-72660157 Msa1036300:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 7_1:-72660170 Msa1036300:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 7_1:-72659300 Msa1036300:CDS
TCCCTTACTCCAGGATTTGC+TGG 0.341796 7_1:-72659659 Msa1036300:CDS
TGATAGGATCATTGGTGGTT+TGG 0.342606 7_1:-72659543 Msa1036300:CDS
GCCGGTGGTAAGGGTCCTTT+TGG 0.346091 7_1:-72660505 Msa1036300:CDS
CCTCGCGGATCATCGGCTCT+TGG 0.353189 7_1:-72659398 Msa1036300:CDS
GATTTCTTAGAACTGTTTGT+TGG 0.356042 7_1:-72660061 Msa1036300:CDS
ATTTGTTTGAGGAAACAGTA+TGG 0.369018 7_1:-72661109 Msa1036300:exon
AAATGCTCTACTAAACATTT+AGG 0.370536 7_1:+72658673 None:intergenic
AACAGTGATGCAAGATTGAT+TGG 0.371102 7_1:+72661139 None:intergenic
GGTTCTCATTCGGAACATAC+TGG 0.373559 7_1:+72659369 None:intergenic
TAGAGCATTTGAATTGGAAT+TGG 0.373744 7_1:-72658660 None:intergenic
CTCGCGGATCATCGGCTCTT+GGG 0.376272 7_1:-72659397 Msa1036300:CDS
TCGCCATCGCCGCCGACAAT+GGG 0.376809 7_1:+72660977 None:intergenic
GATGACTTGCTTCCAATCTT+GGG 0.377308 7_1:-72658975 Msa1036300:CDS
CAACAGCATGACCTGCTTCA+TGG 0.377810 7_1:+72659471 None:intergenic
AAAGCAACTGCAGGGGAATC+TGG 0.378044 7_1:-72660112 Msa1036300:CDS
CTATATGGTTGCCGGTGGTA+AGG 0.395182 7_1:-72660515 Msa1036300:CDS
GTTTAGTAGAGCATTTGAAT+TGG 0.395638 7_1:-72658666 Msa1036300:three_prime_UTR
TTTCTCATCTATATGGTTGC+CGG 0.396422 7_1:-72660523 Msa1036300:CDS
CACCCCATTGTCGGCGGCGA+TGG 0.397410 7_1:-72660980 Msa1036300:CDS
TCAAGTAAATCTGAAATATC+TGG 0.398278 7_1:+72659732 None:intergenic
TTAGAACTGTTTGTTGGTGT+TGG 0.399000 7_1:-72660055 Msa1036300:CDS
ATTTCGAGGCAGCTATTGAT+AGG 0.405057 7_1:-72659559 Msa1036300:CDS
AAAAGGGTCTTCCCTGTGCC+TGG 0.405205 7_1:+72660139 None:intergenic
CATTCAACACCTGTTGACTT+TGG 0.409188 7_1:-72660548 Msa1036300:CDS
CTGGTGGGTCCTCCAGGCAC+AGG 0.412352 7_1:-72660151 Msa1036300:CDS
TTGTATGACCCTTGGTGGTC+GGG 0.412979 7_1:-72659312 Msa1036300:CDS
GTTTAGTAGAGCATTTGAAT+TGG 0.413524 7_1:-72658730 Msa1036300:three_prime_UTR
CCCACCAGAAGAGCACCTTT+TGG 0.413587 7_1:+72660166 None:intergenic
TTCTGAAATTGGCTGGCACC+TGG 0.417740 7_1:-72660584 Msa1036300:CDS
TATGCTCAAGTAGCCGTCTA+TGG 0.420332 7_1:-72659215 Msa1036300:CDS
ATTTCAGAAGAATAGGTAAC+AGG 0.420734 7_1:+72660598 None:intergenic
CGCCTCGCCGTCGCCGTCAC+CGG 0.429111 7_1:+72662360 None:intergenic
GAAGCAGGTCATGCTGTTGC+AGG 0.430567 7_1:-72659467 Msa1036300:CDS
ATTGATGAAATTGATGCAAT+TGG 0.431450 7_1:-72659971 Msa1036300:CDS
GTCATATATTATGGGATGAA+TGG 0.434709 7_1:+72658865 None:intergenic
GATGGCTTTGGAACCACTGC+TGG 0.435918 7_1:-72659869 Msa1036300:CDS
TATTTCAGATTTACTTGAAA+GGG 0.438357 7_1:-72659727 Msa1036300:CDS
TGGTCACGACCTTTGATGTC+AGG 0.443122 7_1:+72659752 None:intergenic
TGGTGATTCAGTACTCTTGA+AGG 0.444257 7_1:+72658944 None:intergenic
CCAGCCAATTTCAGAAGAAT+AGG 0.446134 7_1:+72660591 None:intergenic
AAACCATACAGCAACAAAAC+TGG 0.446545 7_1:-72659131 Msa1036300:CDS
CCTATTCTTCTGAAATTGGC+TGG 0.447841 7_1:-72660591 Msa1036300:CDS
GTGCCATTTCTCTCAATATC+CGG 0.449729 7_1:-72660088 Msa1036300:CDS
CAATAGTTACTTTCAACAAT+GGG 0.453504 7_1:+72659423 None:intergenic
GAACCGGATATTGAGAGAAA+TGG 0.454858 7_1:+72660085 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 7_1:-72659900 Msa1036300:CDS
TCAAATAAGTCATATATTAT+GGG 0.459122 7_1:+72658857 None:intergenic
GTCATGAGAAGGTTCTCATT+CGG 0.459278 7_1:+72659359 None:intergenic
CTCCAGCAAATCCTGGAGTA+AGG 0.460210 7_1:+72659657 None:intergenic
TCGCTCACGCGTCGCCGCAC+CGG 0.460323 7_1:+72662315 None:intergenic
AAGGGTCGCACACCCAAGAT+TGG 0.464532 7_1:+72658963 None:intergenic
TATTGTTCCTCGCGGATCAT+CGG 0.464947 7_1:-72659405 Msa1036300:CDS
AGGGCTTTGTCTAATACATC+AGG 0.465840 7_1:+72659818 None:intergenic
AAATCAATTGTTGGTGGAGA+TGG 0.466589 7_1:-72659891 Msa1036300:CDS
TGAGAAATGCCAAAGTCAAC+AGG 0.467265 7_1:+72660539 None:intergenic
ATCGCCATCGCCGCCGACAA+TGG 0.473751 7_1:+72660976 None:intergenic
TTGGTGGAGATGGATGGCTT+TGG 0.474835 7_1:-72659881 Msa1036300:CDS
CCGATGTTAAAGACTCCAAA+AGG 0.480457 7_1:+72660490 None:intergenic
GTTTATCAATTGTTATTTGG+CGG 0.482713 7_1:+72659774 None:intergenic
AAATGCTCTACTAAACGTTT+AGG 0.483932 7_1:+72658737 None:intergenic
GCTGCCGAGCAGGTTCTCAT+TGG 0.485652 7_1:-72659290 Msa1036300:CDS
AGAATTTCGCACCCCATTGT+CGG 0.486791 7_1:-72660989 Msa1036300:CDS
CACTGCTGGAGTTGTTGTGC+TGG 0.487338 7_1:-72659855 Msa1036300:CDS
ATATCCGCTCCAGCAAATCC+TGG 0.487859 7_1:+72659650 None:intergenic
TACTTGAGCATATGTCATCT+TGG 0.491081 7_1:+72659226 None:intergenic
GCAGCTATTGATAGGATCAT+TGG 0.491525 7_1:-72659551 Msa1036300:CDS
TCATCAATAAATACTATACT+AGG 0.493104 7_1:+72659986 None:intergenic
CTAATCTCAGTCTCCGGTGA+CGG 0.493279 7_1:-72662373 Msa1036300:five_prime_UTR
TATATGGTTGCCGGTGGTAA+GGG 0.494089 7_1:-72660514 Msa1036300:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.495286 7_1:-72659313 Msa1036300:CDS
CTCATTGGAACAATCTCTAC+AGG 0.497010 7_1:-72659275 Msa1036300:CDS
CAAAACGCCCTGGTCTAAGT+AGG 0.497564 7_1:+72659798 None:intergenic
GCTGGAGTTGTTGTGCTGGC+AGG 0.497655 7_1:-72659851 Msa1036300:CDS
TTGATAATGAAGTGCGAGAA+TGG 0.499292 7_1:-72659100 Msa1036300:CDS
TTGATGCAATTGGTCGGGCA+AGG 0.500453 7_1:-72659961 Msa1036300:CDS
AGAGAGAGCTCAAATAGCAC+TGG 0.502174 7_1:-72660644 Msa1036300:CDS
GATAGGACTTGTATGACCCT+TGG 0.505375 7_1:-72659320 Msa1036300:CDS
TGCTCTCTAATCTCAGTCTC+CGG 0.511089 7_1:-72662379 Msa1036300:five_prime_UTR
TTTGTTTGAGGAAACAGTAT+GGG 0.515714 7_1:-72661108 Msa1036300:exon
GTTGTTCCTTTGTCATGAGA+AGG 0.516090 7_1:+72659348 None:intergenic
TACAGGAGCACAAGATGACT+TGG 0.518130 7_1:-72659258 Msa1036300:CDS
CAGTTCTAAGAAATCAGAAC+CGG 0.518886 7_1:+72660069 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 7_1:-72660167 Msa1036300:CDS
ACAATATGATCTACCAATCC+TGG 0.522222 7_1:+72660853 None:intergenic
AGATTGGAAGCAAGTCATCT+TGG 0.522810 7_1:+72658979 None:intergenic
CAACTATGTGGAACAACCTC+AGG 0.525515 7_1:+72658909 None:intergenic
TACTTTAAATCAATTGTTGG+TGG 0.526387 7_1:-72659897 Msa1036300:CDS
CACCATATCCCTTCGCAGGA+AGG 0.526594 7_1:+72660722 None:intergenic
AAGCTTGCATCCCTTACTCC+AGG 0.530533 7_1:-72659668 Msa1036300:CDS
TTGTCTACTTTAGTAAAATG+TGG 0.531413 7_1:+72660463 None:intergenic
AGAGTTCAAAACATATATCT+GGG 0.532045 7_1:+72660810 None:intergenic
TGATGCAATTGGTCGGGCAA+GGG 0.533289 7_1:-72659960 Msa1036300:CDS
ACAATAGTTACTTTCAACAA+TGG 0.533587 7_1:+72659422 None:intergenic
TGGTGGGTCCTCCAGGCACA+GGG 0.536261 7_1:-72660150 Msa1036300:CDS
TGAAGTGAAGGAAATCAAGA+AGG 0.536432 7_1:+72662217 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 7_1:+72659304 None:intergenic
TGAAATTGATGCAATTGGTC+GGG 0.538277 7_1:-72659966 Msa1036300:CDS
CTTAAACATACTCAACTATG+TGG 0.539986 7_1:+72658897 None:intergenic
CGTCACACATGATCATTTCG+AGG 0.540747 7_1:-72659573 Msa1036300:CDS
ACCATATCCCTTCGCAGGAA+GGG 0.541666 7_1:+72660723 None:intergenic
TGCCCACCATATCCCTTCGC+AGG 0.542347 7_1:+72660718 None:intergenic
ATATTTCAGATTTACTTGAA+AGG 0.542997 7_1:-72659728 Msa1036300:CDS
CAGGTCATGCTGTTGCAGGT+TGG 0.548618 7_1:-72659463 Msa1036300:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 7_1:-72660181 Msa1036300:CDS
AACCTGAATTTATGAAGTGA+AGG 0.552716 7_1:+72662205 None:intergenic
TCAGTCTCCGGTGACGGCGA+CGG 0.552886 7_1:-72662367 Msa1036300:five_prime_UTR
AGAAGAAACCCTTCCTGCGA+AGG 0.555125 7_1:-72660731 Msa1036300:CDS
GAAACTTGTTTAAGGAAGCA+AGG 0.555548 7_1:-72660018 Msa1036300:CDS
CCTAAGAAATACCAAGAGCT+TGG 0.555551 7_1:-72660199 Msa1036300:CDS
GTTCTCATTCGGAACATACT+GGG 0.557136 7_1:+72659370 None:intergenic
CTCCGGTGACGGCGACGGCG+AGG 0.557585 7_1:-72662362 Msa1036300:five_prime_UTR
TTCATTTCTGTTTGATTACG+AGG 0.559031 7_1:+72660787 None:intergenic
AGCTTACGTGAATAATATGA+AGG 0.560744 7_1:+72659686 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.562002 7_1:-72659482 Msa1036300:CDS
GGTATTTCTTAGGACTCTTG+AGG 0.566392 7_1:+72660209 None:intergenic
GATGCAATTGGTCGGGCAAG+GGG 0.566686 7_1:-72659959 Msa1036300:CDS
GCTATTGATAGGATCATTGG+TGG 0.567101 7_1:-72659548 Msa1036300:CDS
ATTTGGCGGTCAAAACGCCC+TGG 0.570824 7_1:+72659788 None:intergenic
ATGAAATTGATGCAATTGGT+CGG 0.570840 7_1:-72659967 Msa1036300:CDS
GAAGAAACCCTTCCTGCGAA+GGG 0.573228 7_1:-72660730 Msa1036300:CDS
GATGGCGATGATACTGATGA+TGG 0.573875 7_1:-72660962 Msa1036300:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 7_1:+72659303 None:intergenic
AAGTCAAACACAGAAGATGA+AGG 0.576484 7_1:-72661049 Msa1036300:CDS
ACTGAGATTAGAGAGCAGTA+AGG 0.576722 7_1:+72662385 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.577389 7_1:+72659658 None:intergenic
TCTGTTGTCGCGACTGAGAG+AGG 0.577419 7_1:+72662290 None:intergenic
GAAGCTTATAGAGAAAGAGA+AGG 0.580722 7_1:-72659051 Msa1036300:CDS
CAAACACAGAAGATGAAGGA+AGG 0.581136 7_1:-72661045 Msa1036300:CDS
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 7_1:-72660166 Msa1036300:CDS
CGCCATCGCCGCCGACAATG+GGG 0.584073 7_1:+72660978 None:intergenic
AAAACGCCCTGGTCTAAGTA+GGG 0.589323 7_1:+72659799 None:intergenic
GAATGAATGTCATGAACTCC+AGG 0.589650 7_1:+72660566 None:intergenic
ATTGATAAACCTGACATCAA+AGG 0.590486 7_1:-72659761 Msa1036300:CDS
GACAAAGCCCTACTTAGACC+AGG 0.594683 7_1:-72659806 Msa1036300:CDS
ACCAATTATGATAGAGCCTG+AGG 0.595840 7_1:-72658925 Msa1036300:CDS
TGATAATGAAGTGCGAGAAT+GGG 0.597932 7_1:-72659099 Msa1036300:CDS
CTCATCTATATGGTTGCCGG+TGG 0.598370 7_1:-72660520 Msa1036300:CDS
CGGGCAAGGGGTAGTAGAGG+CGG 0.598922 7_1:-72659947 Msa1036300:CDS
GGTGATTCAGTACTCTTGAA+GGG 0.599010 7_1:+72658945 None:intergenic
ACGACATCGCACAGTCTCAC+CGG 0.600088 7_1:-72662334 Msa1036300:five_prime_UTR
CTTCCTGCGAAGGGATATGG+TGG 0.605558 7_1:-72660721 Msa1036300:CDS
TCTGTTTCTGTTTGATTACG+AGG 0.607446 7_1:+72660760 None:intergenic
TACTCCAGGATTTGCTGGAG+CGG 0.607722 7_1:-72659654 Msa1036300:CDS
TTCTGCAGTATCAAGAACAA+TGG 0.609024 7_1:+72661169 None:intergenic
ACCTGCTTCATGGTAAGCAA+CGG 0.609319 7_1:+72659481 None:intergenic
ATGGCGATGATACTGATGAT+GGG 0.613407 7_1:-72660961 Msa1036300:CDS
ATTTCGCACCCCATTGTCGG+CGG 0.615024 7_1:-72660986 Msa1036300:CDS
ACAGTGATGCAAGATTGATT+GGG 0.615868 7_1:+72661140 None:intergenic
TAACAGGTACAAAATCATGA+TGG 0.616641 7_1:+72660614 None:intergenic
GGTCGGGCAAGGGGTAGTAG+AGG 0.619478 7_1:-72659950 Msa1036300:CDS
AGGACTTGTATGACCCTTGG+TGG 0.619993 7_1:-72659317 Msa1036300:CDS
GAAGTGAAGGAAATCAAGAA+GGG 0.620928 7_1:+72662218 None:intergenic
TGTTCCAATGAGAACCTGCT+CGG 0.621791 7_1:+72659286 None:intergenic
CAGCACAACAACTCCAGCAG+TGG 0.631517 7_1:+72659856 None:intergenic
TCCAAAAGGACCCTTACCAC+CGG 0.633292 7_1:+72660504 None:intergenic
ACAAAGCCCTACTTAGACCA+GGG 0.635104 7_1:-72659805 Msa1036300:CDS
GTGAATAATATGAAGGCTCG+TGG 0.635461 7_1:+72659693 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 7_1:-72659610 Msa1036300:CDS
TGAGAACCTTCTCATGACAA+AGG 0.638697 7_1:-72659354 Msa1036300:CDS
CAATTGTTGGTGGAGATGGA+TGG 0.642273 7_1:-72659887 Msa1036300:CDS
GGTGAGACTGTGCGATGTCG+TGG 0.642413 7_1:+72662336 None:intergenic
TAATGAAGTGCGAGAATGGG+TGG 0.649940 7_1:-72659096 Msa1036300:CDS
GGAGAAAGTAGCTCAACTTG+CGG 0.651792 7_1:-72659030 Msa1036300:CDS
GAGAGAGCTCAAATAGCACT+GGG 0.653868 7_1:-72660643 Msa1036300:CDS
CAGTATCAAGAACAATGGAG+TGG 0.659087 7_1:+72661174 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.659558 7_1:-72660119 Msa1036300:CDS
TGGTTTGGAGAAGAAGAACA+AGG 0.659827 7_1:-72659528 Msa1036300:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.664079 7_1:-72659413 Msa1036300:CDS
AGGGTCTTCCCTGTGCCTGG+AGG 0.665486 7_1:+72660142 None:intergenic
CGTAATCAAACAGAAACAGA+CGG 0.675072 7_1:-72660757 Msa1036300:CDS
ATCGCACAGTCTCACCGGTG+CGG 0.681767 7_1:-72662329 Msa1036300:five_prime_UTR
AGATGTTGCTGGCTGTGATG+AGG 0.687105 7_1:-72660263 Msa1036300:CDS
TGGCGATGATACTGATGATG+GGG 0.688912 7_1:-72660960 Msa1036300:CDS
CGTGAACTGAAACTGTGCGA+GGG 0.714576 7_1:+72662413 None:intergenic
TTCCTGCGAAGGGATATGGT+GGG 0.714800 7_1:-72660720 Msa1036300:CDS
TCGCACAGTTTCAGTTCACG+CGG 0.732567 7_1:-72662410 Msa1036300:five_prime_UTR
GCGTGAACTGAAACTGTGCG+AGG 0.743414 7_1:+72662412 None:intergenic
CCAAGAGCCGATGATCCGCG+AGG 0.755348 7_1:+72659398 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTGTAGTTAATATTTT+AGG - chr7_1:72659836-72659855 Msa1036300:CDS 10.0%
!!! TTTATTCTTTTGTAAATAAA+TGG - chr7_1:72660671-72660690 Msa1036300:CDS 10.0%
!!! TTATATATTTTTCTTAATCT+AGG + chr7_1:72662257-72662276 None:intergenic 10.0%
!! AAATCTAAGTAAAAGAATTT+AGG + chr7_1:72659120-72659139 None:intergenic 15.0%
!!! TTATTTTGAATTCTGTTTAT+TGG - chr7_1:72659224-72659243 Msa1036300:CDS 15.0%
!! TCAAATAAGTCATATATTAT+GGG + chr7_1:72662226-72662245 None:intergenic 15.0%
!! TTCAAATAAGTCATATATTA+TGG + chr7_1:72662227-72662246 None:intergenic 15.0%
!! ATATTATTCTTCTCAAATAT+TGG - chr7_1:72662305-72662324 Msa1036300:five_prime_UTR 15.0%
!! AAATTGAATCAAACAACATA+GGG + chr7_1:72659011-72659030 None:intergenic 20.0%
!! AAAATTGAATCAAACAACAT+AGG + chr7_1:72659012-72659031 None:intergenic 20.0%
!!! ATTCTTTTACTTAGATTTTG+TGG - chr7_1:72659122-72659141 Msa1036300:CDS 20.0%
!!! TTTTTTTAAAGCACATAAAG+AGG - chr7_1:72659149-72659168 Msa1036300:CDS 20.0%
!!! TTTTTTAAAGCACATAAAGA+GGG - chr7_1:72659150-72659169 Msa1036300:CDS 20.0%
!!! TTGTTTATGATTTGGTTAAT+TGG - chr7_1:72659344-72659363 Msa1036300:CDS 20.0%
!! TTGAAATTCTATTTATGACT+TGG - chr7_1:72659474-72659493 Msa1036300:CDS 20.0%
!!! TGTTCAAAAAAATTTGTTTG+AGG - chr7_1:72659960-72659979 Msa1036300:CDS 20.0%
!!! TCTATCTTATATTTTGATAC+TGG - chr7_1:72660152-72660171 Msa1036300:CDS 20.0%
!!! CTATCTTATATTTTGATACT+GGG - chr7_1:72660153-72660172 Msa1036300:CDS 20.0%
!! TCATCAATAAATACTATACT+AGG + chr7_1:72661097-72661116 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG - chr7_1:72661180-72661199 Msa1036300:intron 20.0%
!! ATATTTCAGATTTACTTGAA+AGG - chr7_1:72661352-72661371 Msa1036300:intron 20.0%
!! TATTTCAGATTTACTTGAAA+GGG - chr7_1:72661353-72661372 Msa1036300:intron 20.0%
! AACCCTAGAAATCAAAAATT+GGG - chr7_1:72658965-72658984 Msa1036300:CDS 25.0%
!!! TTTTATCATTGTCGTTTGAT+TGG - chr7_1:72659037-72659056 Msa1036300:CDS 25.0%
! GAGGTATATACAAAGAATTT+AGG + chr7_1:72659087-72659106 None:intergenic 25.0%
! GAATTTAGGAAAACAATTAG+AGG + chr7_1:72659106-72659125 None:intergenic 25.0%
!!! GATGATGAATTATGTTTTGA+TGG - chr7_1:72659272-72659291 Msa1036300:CDS 25.0%
!!! CTGGAATTTTGTTTATGATT+TGG - chr7_1:72659336-72659355 Msa1036300:CDS 25.0%
! AATAGAATTTCAACTGGATT+TGG + chr7_1:72659467-72659486 None:intergenic 25.0%
! GTCATAAATAGAATTTCAAC+TGG + chr7_1:72659473-72659492 None:intergenic 25.0%
!!! CTATTTATGACTTGGTTAAT+TGG - chr7_1:72659482-72659501 Msa1036300:CDS 25.0%
! AATTGGAAAAGTTTATGACT+TGG - chr7_1:72659499-72659518 Msa1036300:CDS 25.0%
! GTTAGTTATAGTTTATGACT+TGG - chr7_1:72659574-72659593 Msa1036300:CDS 25.0%
! TAGCCTAATGTTATTAAAGT+TGG - chr7_1:72659618-72659637 Msa1036300:CDS 25.0%
! AGTCCAACTTTAATAACATT+AGG + chr7_1:72659624-72659643 None:intergenic 25.0%
! GAAGTTGTATATGACATTTA+TGG - chr7_1:72659802-72659821 Msa1036300:CDS 25.0%
! AGAGTTCAAAACATATATCT+GGG + chr7_1:72660273-72660292 None:intergenic 25.0%
! TTGTCTACTTTAGTAAAATG+TGG + chr7_1:72660620-72660639 None:intergenic 25.0%
!!! TGTCTGAATTATTTTTTGTC+AGG - chr7_1:72660784-72660803 Msa1036300:CDS 25.0%
! ATTGATGAAATTGATGCAAT+TGG - chr7_1:72661109-72661128 Msa1036300:exon 25.0%
! TACTTTAAATCAATTGTTGG+TGG - chr7_1:72661183-72661202 Msa1036300:intron 25.0%
!!! GTTTATCAATTGTTATTTGG+CGG + chr7_1:72661309-72661328 None:intergenic 25.0%
!! CAGGTTTATCAATTGTTATT+TGG + chr7_1:72661312-72661331 None:intergenic 25.0%
!! TCAAGTAAATCTGAAATATC+TGG + chr7_1:72661351-72661370 None:intergenic 25.0%
!! CAATAGTTACTTTCAACAAT+GGG + chr7_1:72661660-72661679 None:intergenic 25.0%
!! ACAATAGTTACTTTCAACAA+TGG + chr7_1:72661661-72661680 None:intergenic 25.0%
! TTGGAATTCTTCTCAAATAT+TGG - chr7_1:72662369-72662388 Msa1036300:five_prime_UTR 25.0%
! AAATGCTCTACTAAACATTT+AGG + chr7_1:72662410-72662429 None:intergenic 25.0%
TTCCTTCACTTCATAAATTC+AGG - chr7_1:72658873-72658892 Msa1036300:three_prime_UTR 30.0%
AACCTGAATTTATGAAGTGA+AGG + chr7_1:72658878-72658897 None:intergenic 30.0%
CACTTGATTCAATTCAATGT+CGG - chr7_1:72658918-72658937 Msa1036300:CDS 30.0%
GAACCCTAGAAATCAAAAAT+TGG - chr7_1:72658964-72658983 Msa1036300:CDS 30.0%
ACCCTAGAAATCAAAAATTG+GGG - chr7_1:72658966-72658985 Msa1036300:CDS 30.0%
! TGATTGGAGATTTTCAATTG+AGG - chr7_1:72659053-72659072 Msa1036300:CDS 30.0%
! TTGATGGAGAGAAATTTTGT+TGG - chr7_1:72659288-72659307 Msa1036300:CDS 30.0%
GGAATGAATAGTTTATGACT+TGG - chr7_1:72659309-72659328 Msa1036300:CDS 30.0%
!! TAGTTTATGACTTGGTTAAC+TGG - chr7_1:72659317-72659336 Msa1036300:CDS 30.0%
TCACTCATTGAAATTCTGTA+AGG - chr7_1:72659389-72659408 Msa1036300:CDS 30.0%
!! GATGATGAATTTTGTTGTAG+TGG - chr7_1:72659536-72659555 Msa1036300:CDS 30.0%
!! TTTTGTTGTAGTGGCTTAAT+TGG - chr7_1:72659545-72659564 Msa1036300:CDS 30.0%
!!! GATTTTTTCTATTCTGCAAG+TGG - chr7_1:72659659-72659678 Msa1036300:CDS 30.0%
ATTTGTTTGAGGAAACAGTA+TGG - chr7_1:72659971-72659990 Msa1036300:CDS 30.0%
TTTGTTTGAGGAAACAGTAT+GGG - chr7_1:72659972-72659991 Msa1036300:CDS 30.0%
! GGAGTTTATGAATAAGCTTT+TGG - chr7_1:72660202-72660221 Msa1036300:CDS 30.0%
GAGAGTTCAAAACATATATC+TGG + chr7_1:72660274-72660293 None:intergenic 30.0%
TTCATTTCTGTTTGATTACG+AGG + chr7_1:72660296-72660315 None:intergenic 30.0%
TAACAGGTACAAAATCATGA+TGG + chr7_1:72660469-72660488 None:intergenic 30.0%
ATTTCAGAAGAATAGGTAAC+AGG + chr7_1:72660485-72660504 None:intergenic 30.0%
!! GTTACCTATTCTTCTGAAAT+TGG - chr7_1:72660485-72660504 Msa1036300:CDS 30.0%
TTTGGCATTTCTCATCTATA+TGG - chr7_1:72660550-72660569 Msa1036300:CDS 30.0%
!! ATTTGTATTTTAGGGAGTTG+TGG - chr7_1:72660708-72660727 Msa1036300:CDS 30.0%
!! GTCTATTTTAAAGATGTTGC+TGG - chr7_1:72660806-72660825 Msa1036300:CDS 30.0%
TGAGGCAAAACAAGAAATTA+TGG - chr7_1:72660835-72660854 Msa1036300:CDS 30.0%
GATTTCTTAGAACTGTTTGT+TGG - chr7_1:72661019-72661038 Msa1036300:CDS 30.0%
! TAGAGTGAGAAACTTGTTTA+AGG - chr7_1:72661054-72661073 Msa1036300:CDS 30.0%
ATGAAATTGATGCAATTGGT+CGG - chr7_1:72661113-72661132 Msa1036300:five_prime_UTR 30.0%
ATTGATAAACCTGACATCAA+AGG - chr7_1:72661319-72661338 Msa1036300:intron 30.0%
AGCTTACGTGAATAATATGA+AGG + chr7_1:72661397-72661416 None:intergenic 30.0%
CTTAAACATACTCAACTATG+TGG + chr7_1:72662186-72662205 None:intergenic 30.0%
GTCATATATTATGGGATGAA+TGG + chr7_1:72662218-72662237 None:intergenic 30.0%
AAATGCTCTACTAAACGTTT+AGG + chr7_1:72662346-72662365 None:intergenic 30.0%
! GTTTAGTAGAGCATTTGAAT+TGG - chr7_1:72662350-72662369 Msa1036300:five_prime_UTR 30.0%
! GTTTAGTAGAGCATTTGAAT+TGG - chr7_1:72662350-72662369 Msa1036300:five_prime_UTR 30.0%
GAAGTGAAGGAAATCAAGAA+GGG + chr7_1:72658865-72658884 None:intergenic 35.0%
TGAAGTGAAGGAAATCAAGA+AGG + chr7_1:72658866-72658885 None:intergenic 35.0%
!!! CCCCCAATTTTTGATTTCTA+GGG + chr7_1:72658970-72658989 None:intergenic 35.0%
CCCTAGAAATCAAAAATTGG+GGG - chr7_1:72658967-72658986 Msa1036300:CDS 35.0%
!!! TCCCCCAATTTTTGATTTCT+AGG + chr7_1:72658971-72658990 None:intergenic 35.0%
CAAACAACATAGGGAATCAA+TGG + chr7_1:72659002-72659021 None:intergenic 35.0%
! CTGGATTTGGAACAATTCTT+GGG + chr7_1:72659454-72659473 None:intergenic 35.0%
! ACTGGATTTGGAACAATTCT+TGG + chr7_1:72659455-72659474 None:intergenic 35.0%
!! TAGTTGGTAGCTGGTATATT+TGG - chr7_1:72659734-72659753 Msa1036300:CDS 35.0%
!! TTGGAGCTTTAGATTTGTGT+TGG - chr7_1:72659753-72659772 Msa1036300:CDS 35.0%
TTCTGCAGTATCAAGAACAA+TGG + chr7_1:72659914-72659933 None:intergenic 35.0%
ACAGTGATGCAAGATTGATT+GGG + chr7_1:72659943-72659962 None:intergenic 35.0%
AACAGTGATGCAAGATTGAT+TGG + chr7_1:72659944-72659963 None:intergenic 35.0%
AAGTCAAACACAGAAGATGA+AGG - chr7_1:72660031-72660050 Msa1036300:CDS 35.0%
!!! ATGAATAAGCTTTTGGAACC+AGG - chr7_1:72660209-72660228 Msa1036300:CDS 35.0%
ACAATATGATCTACCAATCC+TGG + chr7_1:72660230-72660249 None:intergenic 35.0%
! TATCTGGGCAACATTTTTGT+CGG + chr7_1:72660258-72660277 None:intergenic 35.0%
!! TCTGTTTCTGTTTGATTACG+AGG + chr7_1:72660323-72660342 None:intergenic 35.0%
CGTAATCAAACAGAAACAGA+CGG - chr7_1:72660323-72660342 Msa1036300:intron 35.0%
!! TGGGAATGTCTTTACTTTTG+AGG - chr7_1:72660406-72660425 Msa1036300:intron 35.0%
TTTCTCATCTATATGGTTGC+CGG - chr7_1:72660557-72660576 Msa1036300:CDS 35.0%
!!! CCTTTTGGAGTCTTTAACAT+CGG - chr7_1:72660590-72660609 Msa1036300:CDS 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG + chr7_1:72660909-72660928 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG + chr7_1:72660960-72660979 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG - chr7_1:72660960-72660979 Msa1036300:CDS 35.0%
!! CAGTTCTAAGAAATCAGAAC+CGG + chr7_1:72661014-72661033 None:intergenic 35.0%
! TTAGAACTGTTTGTTGGTGT+TGG - chr7_1:72661025-72661044 Msa1036300:CDS 35.0%
! GAAACTTGTTTAAGGAAGCA+AGG - chr7_1:72661062-72661081 Msa1036300:CDS 35.0%
TGAAATTGATGCAATTGGTC+GGG - chr7_1:72661114-72661133 Msa1036300:five_prime_UTR 35.0%
! AAATCAATTGTTGGTGGAGA+TGG - chr7_1:72661189-72661208 Msa1036300:intron 35.0%
AAAGTAACTATTGTTCCTCG+CGG - chr7_1:72661667-72661686 Msa1036300:intron 35.0%
! CAAAGGAACAACTTTTCGAT+AGG - chr7_1:72661743-72661762 Msa1036300:intron 35.0%
TACTTGAGCATATGTCATCT+TGG + chr7_1:72661857-72661876 None:intergenic 35.0%
! TTTTTCGCTGAAACCATAGA+CGG + chr7_1:72661881-72661900 None:intergenic 35.0%
TATGGTTTCAGCGAAAAAGT+GGG - chr7_1:72661883-72661902 Msa1036300:intron 35.0%
AAACCATACAGCAACAAAAC+TGG - chr7_1:72661949-72661968 Msa1036300:intron 35.0%
!! TTGATAATGAAGTGCGAGAA+TGG - chr7_1:72661980-72661999 Msa1036300:intron 35.0%
! TGATAATGAAGTGCGAGAAT+GGG - chr7_1:72661981-72662000 Msa1036300:intron 35.0%
GAAGCTTATAGAGAAAGAGA+AGG - chr7_1:72662029-72662048 Msa1036300:intron 35.0%
ACTGAGATTAGAGAGCAGTA+AGG + chr7_1:72658698-72658717 None:intergenic 40.0%
! TTGGGCAGACTTTATTTACC+CGG + chr7_1:72659436-72659455 None:intergenic 40.0%
GTAGTGGCTTAATTGGAATG+AGG - chr7_1:72659552-72659571 Msa1036300:CDS 40.0%
!! TGGCAAGCATTTTAGTAAGC+TGG - chr7_1:72659679-72659698 Msa1036300:CDS 40.0%
! AAGCTGGTTTCGATTCTCTA+AGG - chr7_1:72659695-72659714 Msa1036300:CDS 40.0%
!! GATTCTCTAAGGCTAGGATA+GGG - chr7_1:72659706-72659725 Msa1036300:CDS 40.0%
GATTTGTGTTGGAGTTGTTG+CGG - chr7_1:72659764-72659783 Msa1036300:CDS 40.0%
CAGTATCAAGAACAATGGAG+TGG + chr7_1:72659909-72659928 None:intergenic 40.0%
CAAACACAGAAGATGAAGGA+AGG - chr7_1:72660035-72660054 Msa1036300:CDS 40.0%
ATGGCGATGATACTGATGAT+GGG - chr7_1:72660119-72660138 Msa1036300:CDS 40.0%
!!! TAAGCTTTTGGAACCAGGAT+TGG - chr7_1:72660214-72660233 Msa1036300:CDS 40.0%
CCAGCCAATTTCAGAAGAAT+AGG + chr7_1:72660492-72660511 None:intergenic 40.0%
!! CCTATTCTTCTGAAATTGGC+TGG - chr7_1:72660489-72660508 Msa1036300:CDS 40.0%
GAATGAATGTCATGAACTCC+AGG + chr7_1:72660517-72660536 None:intergenic 40.0%
!! CATTCAACACCTGTTGACTT+TGG - chr7_1:72660532-72660551 Msa1036300:CDS 40.0%
TGAGAAATGCCAAAGTCAAC+AGG + chr7_1:72660544-72660563 None:intergenic 40.0%
CCGATGTTAAAGACTCCAAA+AGG + chr7_1:72660593-72660612 None:intergenic 40.0%
AGACAAAGACGCCAAAAACA+AGG - chr7_1:72660634-72660653 Msa1036300:CDS 40.0%
!! TATTTTAGGGAGTTGTGGTG+TGG - chr7_1:72660713-72660732 Msa1036300:CDS 40.0%
GGTATTTCTTAGGACTCTTG+AGG + chr7_1:72660874-72660893 None:intergenic 40.0%
CCAAGCTCTTGGTATTTCTT+AGG + chr7_1:72660884-72660903 None:intergenic 40.0%
CCTAAGAAATACCAAGAGCT+TGG - chr7_1:72660881-72660900 Msa1036300:CDS 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG - chr7_1:72660899-72660918 Msa1036300:CDS 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG - chr7_1:72660910-72660929 Msa1036300:CDS 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG + chr7_1:72660961-72660980 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG - chr7_1:72660959-72660978 Msa1036300:CDS 40.0%
TTTAGCAAAAGCAACTGCAG+GGG - chr7_1:72660961-72660980 Msa1036300:CDS 40.0%
!! GTGCCATTTCTCTCAATATC+CGG - chr7_1:72660992-72661011 Msa1036300:CDS 40.0%
GAACCGGATATTGAGAGAAA+TGG + chr7_1:72660998-72661017 None:intergenic 40.0%
! AGGGCTTTGTCTAATACATC+AGG + chr7_1:72661265-72661284 None:intergenic 40.0%
GTGAATAATATGAAGGCTCG+TGG + chr7_1:72661390-72661409 None:intergenic 40.0%
ATTTCGAGGCAGCTATTGAT+AGG - chr7_1:72661521-72661540 Msa1036300:intron 40.0%
GCAGCTATTGATAGGATCAT+TGG - chr7_1:72661529-72661548 Msa1036300:intron 40.0%
GCTATTGATAGGATCATTGG+TGG - chr7_1:72661532-72661551 Msa1036300:intron 40.0%
! TGATAGGATCATTGGTGGTT+TGG - chr7_1:72661537-72661556 Msa1036300:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+AGG - chr7_1:72661552-72661571 Msa1036300:intron 40.0%
GTTCTCATTCGGAACATACT+GGG + chr7_1:72661713-72661732 None:intergenic 40.0%
GTCATGAGAAGGTTCTCATT+CGG + chr7_1:72661724-72661743 None:intergenic 40.0%
TGAGAACCTTCTCATGACAA+AGG - chr7_1:72661726-72661745 Msa1036300:intron 40.0%
GTTGTTCCTTTGTCATGAGA+AGG + chr7_1:72661735-72661754 None:intergenic 40.0%
CTCATTGGAACAATCTCTAC+AGG - chr7_1:72661805-72661824 Msa1036300:intron 40.0%
CTATGGTTTCAGCGAAAAAG+TGG - chr7_1:72661882-72661901 Msa1036300:intron 40.0%
! CTAACGAGTCCTCTTTTTGA+GGG + chr7_1:72661921-72661940 None:intergenic 40.0%
! TCTAACGAGTCCTCTTTTTG+AGG + chr7_1:72661922-72661941 None:intergenic 40.0%
AGATTGGAAGCAAGTCATCT+TGG + chr7_1:72662104-72662123 None:intergenic 40.0%
!! AGATGACTTGCTTCCAATCT+TGG - chr7_1:72662104-72662123 Msa1036300:intron 40.0%
!! GATGACTTGCTTCCAATCTT+GGG - chr7_1:72662105-72662124 Msa1036300:intron 40.0%
GGTGATTCAGTACTCTTGAA+GGG + chr7_1:72662138-72662157 None:intergenic 40.0%
TGGTGATTCAGTACTCTTGA+AGG + chr7_1:72662139-72662158 None:intergenic 40.0%
ACCAATTATGATAGAGCCTG+AGG - chr7_1:72662155-72662174 Msa1036300:intron 40.0%
ACCTCAGGCTCTATCATAAT+TGG + chr7_1:72662159-72662178 None:intergenic 40.0%
TGCTCTCTAATCTCAGTCTC+CGG - chr7_1:72658701-72658720 Msa1036300:three_prime_UTR 45.0%
GGGTGAAAACAGCAGAATTG+AGG - chr7_1:72659170-72659189 Msa1036300:CDS 45.0%
GGCCAAACTCAGGATTAAGA+GGG + chr7_1:72659415-72659434 None:intergenic 45.0%
CTCTTAATCCTGAGTTTGGC+CGG - chr7_1:72659414-72659433 Msa1036300:CDS 45.0%
TCTTAATCCTGAGTTTGGCC+GGG - chr7_1:72659415-72659434 Msa1036300:CDS 45.0%
TTATTTACCCGGCCAAACTC+AGG + chr7_1:72659425-72659444 None:intergenic 45.0%
!! GGTTTCGATTCTCTAAGGCT+AGG - chr7_1:72659700-72659719 Msa1036300:CDS 45.0%
!! CGATTCTCTAAGGCTAGGAT+AGG - chr7_1:72659705-72659724 Msa1036300:CDS 45.0%
CTAGGATAGGGCTATCTAGT+TGG - chr7_1:72659718-72659737 Msa1036300:CDS 45.0%
GAAGAAAGGGAGATTAGCAG+TGG + chr7_1:72659871-72659890 None:intergenic 45.0%
CTGTGGAAGGAAGGAAGAAA+GGG + chr7_1:72659884-72659903 None:intergenic 45.0%
ACTGTGGAAGGAAGGAAGAA+AGG + chr7_1:72659885-72659904 None:intergenic 45.0%
AGAACAATGGAGTGGAACTG+TGG + chr7_1:72659901-72659920 None:intergenic 45.0%
AGAATTTCGCACCCCATTGT+CGG - chr7_1:72660091-72660110 Msa1036300:CDS 45.0%
GATGGCGATGATACTGATGA+TGG - chr7_1:72660118-72660137 Msa1036300:CDS 45.0%
! TGGCGATGATACTGATGATG+GGG - chr7_1:72660120-72660139 Msa1036300:CDS 45.0%
AGAGAGAGCTCAAATAGCAC+TGG - chr7_1:72660436-72660455 Msa1036300:intron 45.0%
GAGAGAGCTCAAATAGCACT+GGG - chr7_1:72660437-72660456 Msa1036300:intron 45.0%
TATATGGTTGCCGGTGGTAA+GGG - chr7_1:72660566-72660585 Msa1036300:CDS 45.0%
ACGCCAAAAACAAGGTTCGT+TGG - chr7_1:72660642-72660661 Msa1036300:CDS 45.0%
CGCCAAAAACAAGGTTCGTT+GGG - chr7_1:72660643-72660662 Msa1036300:CDS 45.0%
GCCAAAAACAAGGTTCGTTG+GGG - chr7_1:72660644-72660663 Msa1036300:CDS 45.0%
!! GAATTTTGGCACCAAGCTCT+TGG + chr7_1:72660895-72660914 None:intergenic 45.0%
! CAATTGTTGGTGGAGATGGA+TGG - chr7_1:72661193-72661212 Msa1036300:intron 45.0%
ACAAAGCCCTACTTAGACCA+GGG - chr7_1:72661275-72661294 Msa1036300:intron 45.0%
AAAACGCCCTGGTCTAAGTA+GGG + chr7_1:72661284-72661303 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG + chr7_1:72661425-72661444 None:intergenic 45.0%
CGTCACACATGATCATTTCG+AGG - chr7_1:72661507-72661526 Msa1036300:intron 45.0%
ACCTGCTTCATGGTAAGCAA+CGG + chr7_1:72661602-72661621 None:intergenic 45.0%
TATTGTTCCTCGCGGATCAT+CGG - chr7_1:72661675-72661694 Msa1036300:intron 45.0%
GGTTCTCATTCGGAACATAC+TGG + chr7_1:72661714-72661733 None:intergenic 45.0%
GATAGGACTTGTATGACCCT+TGG - chr7_1:72661760-72661779 Msa1036300:intron 45.0%
TGTTCCAATGAGAACCTGCT+CGG + chr7_1:72661797-72661816 None:intergenic 45.0%
! TACAGGAGCACAAGATGACT+TGG - chr7_1:72661822-72661841 Msa1036300:intron 45.0%
TATGCTCAAGTAGCCGTCTA+TGG - chr7_1:72661865-72661884 Msa1036300:intron 45.0%
!! CTTTTTGAGGGAAAGAGAGG+AGG + chr7_1:72661909-72661928 None:intergenic 45.0%
!! CCTCTTTTTGAGGGAAAGAG+AGG + chr7_1:72661912-72661931 None:intergenic 45.0%
CCTCTCTTTCCCTCAAAAAG+AGG - chr7_1:72661909-72661928 Msa1036300:intron 45.0%
!!! GCACCAGTTTTGTTGCTGTA+TGG + chr7_1:72661955-72661974 None:intergenic 45.0%
TAATGAAGTGCGAGAATGGG+TGG - chr7_1:72661984-72662003 Msa1036300:intron 45.0%
GGAGAAAGTAGCTCAACTTG+CGG - chr7_1:72662050-72662069 Msa1036300:intron 45.0%
CAACTATGTGGAACAACCTC+AGG + chr7_1:72662174-72662193 None:intergenic 45.0%
!! TATAAATATTATTTCAATAT+TGG - chr7_1:72660386-72660405 Msa1036300:intron 5.0%
!! ATAAATATTATTTCAATATT+GGG - chr7_1:72660387-72660406 Msa1036300:intron 5.0%
!!! ATTTTTTATATTTGTATTTT+AGG - chr7_1:72660699-72660718 Msa1036300:CDS 5.0%
!!! TTTTTTATATTTGTATTTTA+GGG - chr7_1:72660700-72660719 Msa1036300:CDS 5.0%
CGTGAACTGAAACTGTGCGA+GGG + chr7_1:72658670-72658689 None:intergenic 50.0%
TCGCACAGTTTCAGTTCACG+CGG - chr7_1:72658670-72658689 Msa1036300:three_prime_UTR 50.0%
CTAATCTCAGTCTCCGGTGA+CGG - chr7_1:72658707-72658726 Msa1036300:three_prime_UTR 50.0%
GGCCCTCTTAATCCTGAGTT+TGG - chr7_1:72659410-72659429 Msa1036300:CDS 50.0%
CGGCCAAACTCAGGATTAAG+AGG + chr7_1:72659416-72659435 None:intergenic 50.0%
!! AGGGCTATCTAGTTGGTAGC+TGG - chr7_1:72659725-72659744 Msa1036300:CDS 50.0%
GAAAGGGAGATTAGCAGTGG+CGG + chr7_1:72659868-72659887 None:intergenic 50.0%
CAATGGAGTGGAACTGTGGA+AGG + chr7_1:72659897-72659916 None:intergenic 50.0%
!! GCAGCAGCAGATTAGCTTTC+AGG - chr7_1:72660181-72660200 Msa1036300:CDS 50.0%
AGAAGAAACCCTTCCTGCGA+AGG - chr7_1:72660349-72660368 Msa1036300:intron 50.0%
GAAGAAACCCTTCCTGCGAA+GGG - chr7_1:72660350-72660369 Msa1036300:intron 50.0%
ACCATATCCCTTCGCAGGAA+GGG + chr7_1:72660360-72660379 None:intergenic 50.0%
TTCCTGCGAAGGGATATGGT+GGG - chr7_1:72660360-72660379 Msa1036300:intron 50.0%
!! TTCTGAAATTGGCTGGCACC+TGG - chr7_1:72660496-72660515 Msa1036300:CDS 50.0%
CTCATCTATATGGTTGCCGG+TGG - chr7_1:72660560-72660579 Msa1036300:CDS 50.0%
CTATATGGTTGCCGGTGGTA+AGG - chr7_1:72660565-72660584 Msa1036300:CDS 50.0%
TCCAAAAGGACCCTTACCAC+CGG + chr7_1:72660579-72660598 None:intergenic 50.0%
!!! GCCCCAACGAACCTTGTTTT+TGG + chr7_1:72660648-72660667 None:intergenic 50.0%
! AGATGTTGCTGGCTGTGATG+AGG - chr7_1:72660817-72660836 Msa1036300:CDS 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG - chr7_1:72660913-72660932 Msa1036300:CDS 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG - chr7_1:72660914-72660933 Msa1036300:CDS 50.0%
AAAGCAACTGCAGGGGAATC+TGG - chr7_1:72660968-72660987 Msa1036300:CDS 50.0%
TTGATGCAATTGGTCGGGCA+AGG - chr7_1:72661119-72661138 Msa1036300:five_prime_UTR 50.0%
TGATGCAATTGGTCGGGCAA+GGG - chr7_1:72661120-72661139 Msa1036300:five_prime_UTR 50.0%
TTGGTGGAGATGGATGGCTT+TGG - chr7_1:72661199-72661218 Msa1036300:intron 50.0%
GACAAAGCCCTACTTAGACC+AGG - chr7_1:72661274-72661293 Msa1036300:intron 50.0%
CAAAACGCCCTGGTCTAAGT+AGG + chr7_1:72661285-72661304 None:intergenic 50.0%
TGGTCACGACCTTTGATGTC+AGG + chr7_1:72661331-72661350 None:intergenic 50.0%
AAGCTTGCATCCCTTACTCC+AGG - chr7_1:72661412-72661431 Msa1036300:intron 50.0%
TCCCTTACTCCAGGATTTGC+TGG - chr7_1:72661421-72661440 Msa1036300:intron 50.0%
CTCCAGCAAATCCTGGAGTA+AGG + chr7_1:72661426-72661445 None:intergenic 50.0%
!! TACTCCAGGATTTGCTGGAG+CGG - chr7_1:72661426-72661445 Msa1036300:intron 50.0%
ATATCCGCTCCAGCAAATCC+TGG + chr7_1:72661433-72661452 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG - chr7_1:72661470-72661489 Msa1036300:intron 50.0%
ACCGTTGCTTACCATGAAGC+AGG - chr7_1:72661598-72661617 Msa1036300:intron 50.0%
CAACAGCATGACCTGCTTCA+TGG + chr7_1:72661612-72661631 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG - chr7_1:72661624-72661643 Msa1036300:intron 50.0%
AGGACTTGTATGACCCTTGG+TGG - chr7_1:72661763-72661782 Msa1036300:intron 50.0%
! CTTGTATGACCCTTGGTGGT+CGG - chr7_1:72661767-72661786 Msa1036300:intron 50.0%
! TTGTATGACCCTTGGTGGTC+GGG - chr7_1:72661768-72661787 Msa1036300:intron 50.0%
GCGTGAACTGAAACTGTGCG+AGG + chr7_1:72658671-72658690 None:intergenic 55.0%
ACGACATCGCACAGTCTCAC+CGG - chr7_1:72658746-72658765 Msa1036300:three_prime_UTR 55.0%
TCTGTTGTCGCGACTGAGAG+AGG + chr7_1:72658793-72658812 None:intergenic 55.0%
GGAGTGGAACTGTGGAAGGA+AGG + chr7_1:72659893-72659912 None:intergenic 55.0%
ATTTCGCACCCCATTGTCGG+CGG - chr7_1:72660094-72660113 Msa1036300:CDS 55.0%
ACCCTTCCTGCGAAGGGATA+TGG - chr7_1:72660356-72660375 Msa1036300:intron 55.0%
CACCATATCCCTTCGCAGGA+AGG + chr7_1:72660361-72660380 None:intergenic 55.0%
CTTCCTGCGAAGGGATATGG+TGG - chr7_1:72660359-72660378 Msa1036300:intron 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG + chr7_1:72660917-72660936 None:intergenic 55.0%
AAAAGGGTCTTCCCTGTGCC+TGG + chr7_1:72660944-72660963 None:intergenic 55.0%
GATGCAATTGGTCGGGCAAG+GGG - chr7_1:72661121-72661140 Msa1036300:five_prime_UTR 55.0%
!! GATGGCTTTGGAACCACTGC+TGG - chr7_1:72661211-72661230 Msa1036300:intron 55.0%
CAGCACAACAACTCCAGCAG+TGG + chr7_1:72661227-72661246 None:intergenic 55.0%
CACTGCTGGAGTTGTTGTGC+TGG - chr7_1:72661225-72661244 Msa1036300:intron 55.0%
ATTTGGCGGTCAAAACGCCC+TGG + chr7_1:72661295-72661314 None:intergenic 55.0%
GAAGCAGGTCATGCTGTTGC+AGG - chr7_1:72661613-72661632 Msa1036300:intron 55.0%
CAGGTCATGCTGTTGCAGGT+TGG - chr7_1:72661617-72661636 Msa1036300:intron 55.0%
AAGGGTCGCACACCCAAGAT+TGG + chr7_1:72662120-72662139 None:intergenic 55.0%
GGTGAGACTGTGCGATGTCG+TGG + chr7_1:72658747-72658766 None:intergenic 60.0%
ATCGCACAGTCTCACCGGTG+CGG - chr7_1:72658751-72658770 Msa1036300:three_prime_UTR 60.0%
TGCCCACCATATCCCTTCGC+AGG + chr7_1:72660365-72660384 None:intergenic 60.0%
! GCCGGTGGTAAGGGTCCTTT+TGG - chr7_1:72660575-72660594 Msa1036300:CDS 60.0%
! GCTGGAGTTGTTGTGCTGGC+AGG - chr7_1:72661229-72661248 Msa1036300:intron 60.0%
!! CTCGCGGATCATCGGCTCTT+GGG - chr7_1:72661683-72661702 Msa1036300:intron 60.0%
GCTGCCGAGCAGGTTCTCAT+TGG - chr7_1:72661790-72661809 Msa1036300:intron 60.0%
! TCAGTCTCCGGTGACGGCGA+CGG - chr7_1:72658713-72658732 Msa1036300:three_prime_UTR 65.0%
TCGCCATCGCCGCCGACAAT+GGG + chr7_1:72660106-72660125 None:intergenic 65.0%
ATCGCCATCGCCGCCGACAA+TGG + chr7_1:72660107-72660126 None:intergenic 65.0%
! GCTCTTCTGGTGGGTCCTCC+AGG - chr7_1:72660923-72660942 Msa1036300:CDS 65.0%
! TGGTGGGTCCTCCAGGCACA+GGG - chr7_1:72660930-72660949 Msa1036300:CDS 65.0%
AGGGTCTTCCCTGTGCCTGG+AGG + chr7_1:72660941-72660960 None:intergenic 65.0%
GGTCGGGCAAGGGGTAGTAG+AGG - chr7_1:72661130-72661149 Msa1036300:five_prime_UTR 65.0%
CGGGCAAGGGGTAGTAGAGG+CGG - chr7_1:72661133-72661152 Msa1036300:five_prime_UTR 65.0%
CCAAGAGCCGATGATCCGCG+AGG + chr7_1:72661685-72661704 None:intergenic 65.0%
!! CCTCGCGGATCATCGGCTCT+TGG - chr7_1:72661682-72661701 Msa1036300:intron 65.0%
CACCCCATTGTCGGCGGCGA+TGG - chr7_1:72660100-72660119 Msa1036300:CDS 70.0%
CGCCATCGCCGCCGACAATG+GGG + chr7_1:72660105-72660124 None:intergenic 70.0%
! CTGGTGGGTCCTCCAGGCAC+AGG - chr7_1:72660929-72660948 Msa1036300:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG + chr7_1:72661779-72661798 None:intergenic 70.0%
TCGCTCACGCGTCGCCGCAC+CGG + chr7_1:72658768-72658787 None:intergenic 75.0%
GCTCGGCAGCCCGACCACCA+AGG + chr7_1:72661780-72661799 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG - chr7_1:72661780-72661799 Msa1036300:intron 75.0%
!! CTCCGGTGACGGCGACGGCG+AGG - chr7_1:72658718-72658737 Msa1036300:three_prime_UTR 80.0%
! CGCCTCGCCGTCGCCGTCAC+CGG + chr7_1:72658723-72658742 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72658662 72662440 72658662 ID=Msa1036300;Name=Msa1036300
chr7_1 mRNA 72658662 72662440 72658662 ID=Msa1036300-mRNA-1;Parent=Msa1036300;Name=Msa1036300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=319|1|1|1|0.5|0.33|3|246|684
chr7_1 exon 72658662 72660296 72658662 ID=Msa1036300-mRNA-1:exon:17728;Parent=Msa1036300-mRNA-1
chr7_1 exon 72660447 72661198 72660447 ID=Msa1036300-mRNA-1:exon:17727;Parent=Msa1036300-mRNA-1
chr7_1 exon 72662208 72662440 72662208 ID=Msa1036300-mRNA-1:exon:17726;Parent=Msa1036300-mRNA-1
chr7_1 five_prime_UTR 72662208 72662440 72662208 ID=Msa1036300-mRNA-1:five_prime_utr;Parent=Msa1036300-mRNA-1
chr7_1 five_prime_UTR 72661113 72661198 72661113 ID=Msa1036300-mRNA-1:five_prime_utr;Parent=Msa1036300-mRNA-1
chr7_1 CDS 72660447 72661112 72660447 ID=Msa1036300-mRNA-1:cds;Parent=Msa1036300-mRNA-1
chr7_1 CDS 72658908 72660296 72658908 ID=Msa1036300-mRNA-1:cds;Parent=Msa1036300-mRNA-1
chr7_1 three_prime_UTR 72658662 72658907 72658662 ID=Msa1036300-mRNA-1:three_prime_utr;Parent=Msa1036300-mRNA-1
Gene Sequence

>Msa1036300

ATGGGAAACGATAAGAAAAAAACGAATCGAAAGAAGAAACAAAGTCAAACACAGAAGATGAAGGAAGGAAGCTTTCAAGAAGCATTGATGAAACAAATTCAAGAATTTCGCACCCCATTGTCGGCGGCGATGGCGATGATACTGATGATGGGGATAACTCTTTCTATCTTATATTTTGATACTGGGAAGCAGCAGCAGCAGATTAGCTTTCAGGAGTTTATGAATAAGCTTTTGGAACCAGGATTGGTAGATCATATTGTTGTCTCCGACAAAAATGTTGCCCAGATATATGTTTTGAACTCTCCTCGTAATCAAACAGAAATGAACTCTCCTCGTAATCAAACAGAAACAGACGGTGAAGAAGAAACCCTTCCTGCGAAGGGATATGGTGGGCAATATAAATATTATTTCAATATTGGGAATGTCTTTACTTTTGAGGAGAAATTAGAGAGAGCTCAAATAGCACTGGGTGTTGACCATCATGATTTTGTACCTGTTACCTATTCTTCTGAAATTGGCTGGCACCTGGAGTTCATGACATTCATTCAACACCTGTTGACTTTGGCATTTCTCATCTATATGGTTGCCGGTGGTAAGGGTCCTTTTGGAGTCTTTAACATCGGAAAACCACATTTTACTAAAGTAGACAAAGACGCCAAAAACAAGGTCTATTTTAAAGATGTTGCTGGCTGTGATGAGGCAAAACAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAGTCCTAAGAAATACCAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCTCCAGGCACAGGGAAGACCCTTTTAGCAAAAGCAACTGCAGGGGAATCTGGTGTGCCATTTCTCTCAATATCCGGTTCTGATTTCTTAGAACTGTTTGTTGGTGTTGGATCATCTAGAGTGAGAAACTTGTTTAAGGAAGCAAGGAAGTGTGCTCCTAGTATAGTATTTATTGATGAAATTGATGCAATTGGTCGGGCAAGGGGTAGTAGAGGCGGAGATCGTGCAAATGATGAACGTGAAAGTACTTTAAATCAATTGTTGGTGGAGATGGATGGCTTTGGAACCACTGCTGGAGTTGTTGTGCTGGCAGGTACAAATAGACCTGATGTATTAGACAAAGCCCTACTTAGACCAGGGCGTTTTGACCGCCAAATAACAATTGATAAACCTGACATCAAAGGTCGTGACCAGATATTTCAGATTTACTTGAAAGGGATCAAACTTGACCACGAGCCTTCATATTATTCACGTAAGCTTGCATCCCTTACTCCAGGATTTGCTGGAGCGGATATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAAGCACACGTCACACATGATCATTTCGAGGCAGCTATTGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGTAAGCTGCAAAGACGCACCGTTGCTTACCATGAAGCAGGTCATGCTGTTGCAGGTTGGTTCTTGGAACATACTGACCCATTGTTGAAAGTAACTATTGTTCCTCGCGGATCATCGGCTCTTGGGTTTGCCCAGTATGTTCCGAATGAGAACCTTCTCATGACAAAGGAACAACTTTTCGATAGGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAACAATCTCTACAGGAGCACAAGATGACTTGGAGAAAGTTACCAAGATGACATATGCTCAAGTAGCCGTCTATGGTTTCAGCGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAAAGAGGACTCGTTAGAGATGTCTAAACCATACAGCAACAAAACTGGTGCAATCATTGATAATGAAGTGCGAGAATGGGTGGACAAAGCATATGAACGTACTGTGAAGCTTATAGAGAAAGAGAAGGAGAAAGTAGCTCAACTTGCGGAGTTGCTGCTTGAAAAAGAAGTTCTTCACCAAGATGACTTGCTTCCAATCTTGGGTGTGCGACCCTTCAAGAGTACTGAATCACCAATTATGATAGAGCCTGAGGTTGTTCCACATAGTTGA
Protein sequence

>Msa1036300

MGNDKKKTNRKKKQSQTQKMKEGSFQEALMKQIQEFRTPLSAAMAMILMMGITLSILYFDTGKQQQQISFQEFMNKLLEPGLVDHIVVSDKNVAQIYVLNSPRNQTEMNSPRNQTETDGEEETLPAKGYGGQYKYYFNIGNVFTFEEKLERAQIALGVDHHDFVPVTYSSEIGWHLEFMTFIQHLLTLAFLIYMVAGGKGPFGVFNIGKPHFTKVDKDAKNKVYFKDVAGCDEAKQEIMEFVHFLKSPKKYQELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFLELFVGVGSSRVRNLFKEARKCAPSIVFIDEIDAIGRARGSRGGDRANDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDVLDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKGIKLDHEPSYYSRKLASLTPGFAGADIANVCNEAALIAARTDEAHVTHDHFEAAIDRIIGGLEKKNKVISKLQRRTVAYHEAGHAVAGWFLEHTDPLLKVTIVPRGSSALGFAQYVPNENLLMTKEQLFDRTCMTLGGRAAEQVLIGTISTGAQDDLEKVTKMTYAQVAVYGFSEKVGLLSFPQKEDSLEMSKPYSNKTGAIIDNEVREWVDKAYERTVKLIEKEKEKVAQLAELLLEKEVLHQDDLLPILGVRPFKSTESPIMIEPEVVPHS*