Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047870 | KEH21585.1 | 94.286 | 385 | 20 | 1 | 1 | 383 | 535 | 919 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047870 | A0A072U6U7 | 94.286 | 385 | 20 | 1 | 1 | 383 | 535 | 919 | 0.0 | 692 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001780 | Msa1047870 | 0.804718 | 1.888491e-49 | -8.615850e-47 |
| Msa0002490 | Msa1047870 | 0.800383 | 1.479131e-48 | -8.615850e-47 |
| Msa0003700 | Msa1047870 | 0.808469 | 3.049510e-50 | -8.615850e-47 |
| Msa0016670 | Msa1047870 | 0.807083 | 6.011931e-50 | -8.615850e-47 |
| Msa0017510 | Msa1047870 | 0.810663 | 1.030747e-50 | -8.615850e-47 |
| Msa0032090 | Msa1047870 | 0.805055 | 1.605765e-49 | -8.615850e-47 |
| Msa0032430 | Msa1047870 | 0.806514 | 7.929304e-50 | -8.615850e-47 |
| Msa0032920 | Msa1047870 | -0.859874 | 3.057414e-63 | -8.615850e-47 |
| Msa0032960 | Msa1047870 | -0.845492 | 3.926649e-59 | -8.615850e-47 |
| Msa0061340 | Msa1047870 | 0.839280 | 1.741514e-57 | -8.615850e-47 |
| Msa0072900 | Msa1047870 | 0.802366 | 5.804544e-49 | -8.615850e-47 |
| Msa0074240 | Msa1047870 | 0.818938 | 1.509369e-52 | -8.615850e-47 |
| Msa0078650 | Msa1047870 | 0.803284 | 3.751720e-49 | -8.615850e-47 |
| Msa0081520 | Msa1047870 | 0.835147 | 1.987135e-56 | -8.615850e-47 |
| Msa0089630 | Msa1047870 | 0.800433 | 1.444315e-48 | -8.615850e-47 |
| Msa0094120 | Msa1047870 | 0.833059 | 6.629282e-56 | -8.615850e-47 |
| Msa0094850 | Msa1047870 | 0.808183 | 3.510205e-50 | -8.615850e-47 |
| Msa0110970 | Msa1047870 | 0.821813 | 3.306197e-53 | -8.615850e-47 |
| Msa0604540 | Msa1047870 | 0.813121 | 3.004624e-51 | -8.615850e-47 |
| Msa0626450 | Msa1047870 | 0.856262 | 3.624461e-62 | -8.615850e-47 |
| Msa0626490 | Msa1047870 | 0.858003 | 1.109836e-62 | -8.615850e-47 |
| Msa0639430 | Msa1047870 | 0.815233 | 1.026838e-51 | -8.615850e-47 |
| Msa0664600 | Msa1047870 | 0.855177 | 7.514645e-62 | -8.615850e-47 |
| Msa0677410 | Msa1047870 | 0.832118 | 1.134184e-55 | -8.615850e-47 |
| Msa0682330 | Msa1047870 | 0.812411 | 4.297381e-51 | -8.615850e-47 |
| Msa0710800 | Msa1047870 | 0.803050 | 4.193868e-49 | -8.615850e-47 |
| Msa0724910 | Msa1047870 | 0.814282 | 1.667695e-51 | -8.615850e-47 |
| Msa0730430 | Msa1047870 | 0.805741 | 1.153062e-49 | -8.615850e-47 |
| Msa0736960 | Msa1047870 | 0.804957 | 1.683274e-49 | -8.615850e-47 |
| Msa0737570 | Msa1047870 | 0.826312 | 2.906266e-54 | -8.615850e-47 |
| Msa0741240 | Msa1047870 | 0.817973 | 2.497524e-52 | -8.615850e-47 |
| Msa0741840 | Msa1047870 | 0.827841 | 1.252262e-54 | -8.615850e-47 |
| Msa0743730 | Msa1047870 | 0.810207 | 1.293034e-50 | -8.615850e-47 |
| Msa0744000 | Msa1047870 | 0.805855 | 1.091060e-49 | -8.615850e-47 |
| Msa0749230 | Msa1047870 | 0.802379 | 5.769140e-49 | -8.615850e-47 |
| Msa0765240 | Msa1047870 | 0.801926 | 7.151276e-49 | -8.615850e-47 |
| Msa0770720 | Msa1047870 | 0.800898 | 1.161062e-48 | -8.615850e-47 |
| Msa0796530 | Msa1047870 | 0.805374 | 1.377071e-49 | -8.615850e-47 |
| Msa0807280 | Msa1047870 | 0.812095 | 5.036748e-51 | -8.615850e-47 |
| Msa0807820 | Msa1047870 | 0.804701 | 1.903998e-49 | -8.615850e-47 |
| Msa0821760 | Msa1047870 | 0.817882 | 2.618811e-52 | -8.615850e-47 |
| Msa0822890 | Msa1047870 | 0.808944 | 2.414868e-50 | -8.615850e-47 |
| Msa0828560 | Msa1047870 | 0.828123 | 1.070589e-54 | -8.615850e-47 |
| Msa0121090 | Msa1047870 | 0.806289 | 8.844765e-50 | -8.615850e-47 |
| Msa0144360 | Msa1047870 | 0.800983 | 1.115907e-48 | -8.615850e-47 |
| Msa0146260 | Msa1047870 | 0.815845 | 7.500880e-52 | -8.615850e-47 |
| Msa0152400 | Msa1047870 | 0.833952 | 3.967932e-56 | -8.615850e-47 |
| Msa0157290 | Msa1047870 | 0.811012 | 8.659761e-51 | -8.615850e-47 |
| Msa0159930 | Msa1047870 | 0.802937 | 4.424991e-49 | -8.615850e-47 |
| Msa0160130 | Msa1047870 | 0.812578 | 3.950138e-51 | -8.615850e-47 |
| Msa0172070 | Msa1047870 | 0.801477 | 8.840346e-49 | -8.615850e-47 |
| Msa0173890 | Msa1047870 | 0.842562 | 2.397040e-58 | -8.615850e-47 |
| Msa0211150 | Msa1047870 | 0.827914 | 1.202275e-54 | -8.615850e-47 |
| Msa0212990 | Msa1047870 | 0.804391 | 2.209229e-49 | -8.615850e-47 |
| Msa0223690 | Msa1047870 | 0.805466 | 1.316767e-49 | -8.615850e-47 |
| Msa0225740 | Msa1047870 | 0.833659 | 4.697031e-56 | -8.615850e-47 |
| Msa0366240 | Msa1047870 | 0.812779 | 3.569839e-51 | -8.615850e-47 |
| Msa0376350 | Msa1047870 | 0.802261 | 6.100581e-49 | -8.615850e-47 |
| Msa0378720 | Msa1047870 | 0.824946 | 6.126951e-54 | -8.615850e-47 |
| Msa0392510 | Msa1047870 | 0.800282 | 1.550378e-48 | -8.615850e-47 |
| Msa0410500 | Msa1047870 | 0.803763 | 2.984494e-49 | -8.615850e-47 |
| Msa0410650 | Msa1047870 | 0.820819 | 5.606740e-53 | -8.615850e-47 |
| Msa0417880 | Msa1047870 | 0.831905 | 1.280385e-55 | -8.615850e-47 |
| Msa0422850 | Msa1047870 | 0.839885 | 1.212143e-57 | -8.615850e-47 |
| Msa0422930 | Msa1047870 | 0.839847 | 1.239963e-57 | -8.615850e-47 |
| Msa0428150 | Msa1047870 | 0.801105 | 1.053472e-48 | -8.615850e-47 |
| Msa0430260 | Msa1047870 | 0.814344 | 1.616491e-51 | -8.615850e-47 |
| Msa0440750 | Msa1047870 | 0.805275 | 1.443943e-49 | -8.615850e-47 |
| Msa0450720 | Msa1047870 | 0.800845 | 1.190510e-48 | -8.615850e-47 |
| Msa0464380 | Msa1047870 | 0.806568 | 7.723194e-50 | -8.615850e-47 |
| Msa0464680 | Msa1047870 | 0.800729 | 1.257149e-48 | -8.615850e-47 |
| Msa0467430 | Msa1047870 | 0.811358 | 7.287720e-51 | -8.615850e-47 |
| Msa0467490 | Msa1047870 | 0.813870 | 2.056177e-51 | -8.615850e-47 |
| Msa0469030 | Msa1047870 | 0.812416 | 4.286580e-51 | -8.615850e-47 |
| Msa0474730 | Msa1047870 | 0.810173 | 1.314753e-50 | -8.615850e-47 |
| Msa0475790 | Msa1047870 | 0.810522 | 1.105345e-50 | -8.615850e-47 |
| Msa0479170 | Msa1047870 | 0.848216 | 7.059987e-60 | -8.615850e-47 |
| Msa0479200 | Msa1047870 | 0.802246 | 6.144493e-49 | -8.615850e-47 |
| Msa1002000 | Msa1047870 | 0.800264 | 1.563652e-48 | -8.615850e-47 |
| Msa1020510 | Msa1047870 | 0.811921 | 5.498052e-51 | -8.615850e-47 |
| Msa1020670 | Msa1047870 | 0.820936 | 5.269764e-53 | -8.615850e-47 |
| Msa1045140 | Msa1047870 | 0.811695 | 6.155137e-51 | -8.615850e-47 |
| Msa1045200 | Msa1047870 | 0.802911 | 4.481624e-49 | -8.615850e-47 |
| Msa1047870 | Msa1050910 | 0.800454 | 1.430339e-48 | -8.615850e-47 |
| Msa1047870 | Msa1051830 | 0.802786 | 4.754931e-49 | -8.615850e-47 |
| Msa1047870 | Msa1059960 | 0.805502 | 1.294136e-49 | -8.615850e-47 |
| Msa1047870 | Msa1079230 | 0.822716 | 2.041066e-53 | -8.615850e-47 |
| Msa1047870 | Msa1085200 | 0.817820 | 2.703881e-52 | -8.615850e-47 |
| Msa1047870 | Msa1102770 | 0.811873 | 5.631860e-51 | -8.615850e-47 |
| Msa1047870 | Msa1121440 | 0.804564 | 2.033084e-49 | -8.615850e-47 |
| Msa1047870 | Msa1123380 | 0.805541 | 1.270208e-49 | -8.615850e-47 |
| Msa1047870 | Msa1124110 | 0.830961 | 2.186799e-55 | -8.615850e-47 |
| Msa1047870 | Msa1127890 | 0.812719 | 3.680438e-51 | -8.615850e-47 |
| Msa1047870 | Msa1135270 | 0.919576 | 3.785889e-87 | -8.615850e-47 |
| Msa1047870 | Msa1139890 | 0.805449 | 1.327659e-49 | -8.615850e-47 |
| Msa1047870 | Msa1140210 | 0.839517 | 1.511699e-57 | -8.615850e-47 |
| Msa1047870 | Msa1143650 | 0.809835 | 1.554542e-50 | -8.615850e-47 |
| Msa1047870 | Msa1145810 | 0.805585 | 1.243140e-49 | -8.615850e-47 |
| Msa1047870 | Msa1151910 | 0.809944 | 1.473207e-50 | -8.615850e-47 |
| Msa1047870 | Msa1168950 | 0.823565 | 1.293476e-53 | -8.615850e-47 |
| Msa1047870 | Msa1169040 | 0.811101 | 8.284630e-51 | -8.615850e-47 |
| Msa1047870 | Msa1182860 | 0.808024 | 3.794174e-50 | -8.615850e-47 |
| Msa1047870 | Msa1196440 | 0.803988 | 2.680456e-49 | -8.615850e-47 |
| Msa1047870 | Msa1199570 | 0.809453 | 1.878068e-50 | -8.615850e-47 |
| Msa1047870 | Msa1209460 | 0.805527 | 1.278996e-49 | -8.615850e-47 |
| Msa1047870 | Msa1236240 | 0.816237 | 6.134556e-52 | -8.615850e-47 |
| Msa1047870 | Msa1252190 | 0.817072 | 3.986635e-52 | -8.615850e-47 |
| Msa1047870 | Msa1274060 | 0.803614 | 3.204453e-49 | -8.615850e-47 |
| Msa1047870 | Msa1276660 | 0.835308 | 1.810258e-56 | -8.615850e-47 |
| Msa1047870 | Msa1277490 | 0.818824 | 1.602377e-52 | -8.615850e-47 |
| Msa1047870 | Msa1292830 | 0.803090 | 4.115442e-49 | -8.615850e-47 |
| Msa1047870 | Msa1320410 | 0.805804 | 1.118738e-49 | -8.615850e-47 |
| Msa1047870 | Msa1324080 | 0.805445 | 1.330492e-49 | -8.615850e-47 |
| Msa1047870 | Msa1328710 | 0.823389 | 1.421946e-53 | -8.615850e-47 |
| Msa1047870 | Msa1348090 | 0.817615 | 3.008578e-52 | -8.615850e-47 |
| Msa1047870 | Msa1356830 | 0.816128 | 6.487254e-52 | -8.615850e-47 |
| Msa1047870 | Msa1360980 | 0.824245 | 8.958214e-54 | -8.615850e-47 |
| Msa1047870 | Msa1366600 | 0.809034 | 2.309652e-50 | -8.615850e-47 |
| Msa1047870 | Msa1369150 | 0.844078 | 9.443226e-59 | -8.615850e-47 |
| Msa1047870 | Msa1373330 | 0.808478 | 3.036311e-50 | -8.615850e-47 |
| Msa1047870 | Msa1374040 | 0.811338 | 7.358234e-51 | -8.615850e-47 |
| Msa1047870 | Msa1375560 | 0.813945 | 1.979173e-51 | -8.615850e-47 |
| Msa1047870 | Msa1382560 | 0.801483 | 8.815142e-49 | -8.615850e-47 |
| Msa1047870 | Msa1386710 | 0.804618 | 1.980951e-49 | -8.615850e-47 |
| Msa1047870 | Msa1398340 | 0.808120 | 3.619913e-50 | -8.615850e-47 |
| Msa1047870 | Msa1409870 | 0.815933 | 7.169420e-52 | -8.615850e-47 |
| Msa1047870 | Msa1422580 | 0.801766 | 7.713344e-49 | -8.615850e-47 |
| Msa1047870 | Msa1423350 | 0.805382 | 1.371341e-49 | -8.615850e-47 |
| Msa1047870 | Msa1435890 | 0.808565 | 2.909187e-50 | -8.615850e-47 |
| Msa1047870 | Msa1437940 | 0.827668 | 1.377950e-54 | -8.615850e-47 |
| Msa1047870 | Msa1440960 | 0.838593 | 2.623141e-57 | -8.615850e-47 |
| Msa1047870 | Msa1445190 | 0.802947 | 4.404496e-49 | -8.615850e-47 |
| Msa1047870 | Msa1451160 | 0.810134 | 1.340378e-50 | -8.615850e-47 |
| Msa1047870 | Msa1460020 | 0.804063 | 2.585236e-49 | -8.615850e-47 |
| Msa1047870 | Msa1464810 | 0.828827 | 7.240370e-55 | -8.615850e-47 |
| Msa0244860 | Msa1047870 | 0.812745 | 3.631642e-51 | -8.615850e-47 |
| Msa0255090 | Msa1047870 | 0.825577 | 4.345621e-54 | -8.615850e-47 |
| Msa0258310 | Msa1047870 | 0.815480 | 9.046883e-52 | -8.615850e-47 |
| Msa0259380 | Msa1047870 | 0.821898 | 3.160070e-53 | -8.615850e-47 |
| Msa0261340 | Msa1047870 | 0.822906 | 1.843159e-53 | -8.615850e-47 |
| Msa0263080 | Msa1047870 | 0.802773 | 4.784581e-49 | -8.615850e-47 |
| Msa0266350 | Msa1047870 | 0.804327 | 2.278454e-49 | -8.615850e-47 |
| Msa0277450 | Msa1047870 | 0.802623 | 5.138149e-49 | -8.615850e-47 |
| Msa0283450 | Msa1047870 | 0.816177 | 6.324540e-52 | -8.615850e-47 |
| Msa0283520 | Msa1047870 | 0.821255 | 4.450642e-53 | -8.615850e-47 |
| Msa0287650 | Msa1047870 | 0.817872 | 2.632100e-52 | -8.615850e-47 |
| Msa0292120 | Msa1047870 | 0.845251 | 4.562729e-59 | -8.615850e-47 |
| Msa0292400 | Msa1047870 | 0.825391 | 4.810332e-54 | -8.615850e-47 |
| Msa0297790 | Msa1047870 | 0.806538 | 7.834012e-50 | -8.615850e-47 |
| Msa0300690 | Msa1047870 | 0.841358 | 4.988596e-58 | -8.615850e-47 |
| Msa0317730 | Msa1047870 | 0.805305 | 1.423036e-49 | -8.615850e-47 |
| Msa0330340 | Msa1047870 | 0.801215 | 1.000417e-48 | -8.615850e-47 |
| Msa0332000 | Msa1047870 | 0.823938 | 1.058041e-53 | -8.615850e-47 |
| Msa0338210 | Msa1047870 | 0.823687 | 1.211440e-53 | -8.615850e-47 |
| Msa0342310 | Msa1047870 | 0.815280 | 1.002606e-51 | -8.615850e-47 |
| Msa0345970 | Msa1047870 | 0.805502 | 1.294136e-49 | -8.615850e-47 |
| Msa0358890 | Msa1047870 | 0.807950 | 3.934222e-50 | -8.615850e-47 |
| Msa0498060 | Msa1047870 | 0.814093 | 1.836150e-51 | -8.615850e-47 |
| Msa0507680 | Msa1047870 | 0.820659 | 6.102725e-53 | -8.615850e-47 |
| Msa0532070 | Msa1047870 | 0.802969 | 4.359626e-49 | -8.615850e-47 |
| Msa0546680 | Msa1047870 | 0.827200 | 1.784141e-54 | -8.615850e-47 |
| Msa0557070 | Msa1047870 | 0.802748 | 4.842083e-49 | -8.615850e-47 |
| Msa0569200 | Msa1047870 | 0.832944 | 7.079912e-56 | -8.615850e-47 |
| Msa0574890 | Msa1047870 | 0.811450 | 6.958012e-51 | -8.615850e-47 |
| Msa0856920 | Msa1047870 | 0.830647 | 2.610949e-55 | -8.615850e-47 |
| Msa0861510 | Msa1047870 | 0.841454 | 4.705734e-58 | -8.615850e-47 |
| Msa0861530 | Msa1047870 | 0.825867 | 3.709048e-54 | -8.615850e-47 |
| Msa0861600 | Msa1047870 | 0.845503 | 3.898943e-59 | -8.615850e-47 |
| Msa0861870 | Msa1047870 | 0.830040 | 3.673580e-55 | -8.615850e-47 |
| Msa0863930 | Msa1047870 | 0.805065 | 1.597680e-49 | -8.615850e-47 |
| Msa0864300 | Msa1047870 | 0.807178 | 5.737992e-50 | -8.615850e-47 |
| Msa0866520 | Msa1047870 | 0.837202 | 5.972177e-57 | -8.615850e-47 |
| Msa0871260 | Msa1047870 | 0.830364 | 3.062145e-55 | -8.615850e-47 |
| Msa0876190 | Msa1047870 | 0.800039 | 1.737293e-48 | -8.615850e-47 |
| Msa0880140 | Msa1047870 | 0.809833 | 1.556418e-50 | -8.615850e-47 |
| Msa0896540 | Msa1047870 | 0.800644 | 1.308265e-48 | -8.615850e-47 |
| Msa0945110 | Msa1047870 | 0.816195 | 6.267861e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047870 | MtrunA17_Chr7g0215791 | 94.286 | 385 | 20 | 1 | 1 | 383 | 573 | 957 | 0.0 | 692 |
| Msa1047870 | MtrunA17_Chr7g0215791 | 39.007 | 141 | 74 | 7 | 3 | 135 | 413 | 549 | 2.56e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 89 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCATCCTTCTCATTTC+AGG | 0.155974 | 7_2:-9002219 | Msa1047870:CDS |
| CAAATTAGGCTTCAGAAAAT+TGG | 0.181564 | 7_2:-9001362 | Msa1047870:CDS |
| TCCACACTCTTTGATGGTTC+TGG | 0.237883 | 7_2:+9001518 | None:intergenic |
| CGGTTTCCAAGTGGAAGATT+TGG | 0.247884 | 7_2:-9002371 | Msa1047870:CDS |
| AATCCGCTGCAGGAAGGTTT+AGG | 0.273976 | 7_2:-9002064 | Msa1047870:CDS |
| TGAGTTTCATCAACAGATAT+TGG | 0.296093 | 7_2:+9002196 | None:intergenic |
| GAATTTCCATGAGGTGGATT+TGG | 0.300356 | 7_2:-9002308 | Msa1047870:CDS |
| TCTGAATATGTCAATGATTC+AGG | 0.305872 | 7_2:-9001440 | Msa1047870:CDS |
| TTCTGATGAAACAGAATCTA+TGG | 0.310449 | 7_2:+9002093 | None:intergenic |
| AAGTCTTCCACACTCTTTGA+TGG | 0.315244 | 7_2:+9001512 | None:intergenic |
| AGAGCCAGTGGATTGCCTTC+AGG | 0.329099 | 7_2:-9001752 | Msa1047870:CDS |
| AAATTCATATCTTCAGAAAA+AGG | 0.344657 | 7_2:+9002325 | None:intergenic |
| AACGAAACCTCATCATGATT+TGG | 0.365971 | 7_2:+9001566 | None:intergenic |
| ATCCGCTGCAGGAAGGTTTA+GGG | 0.369848 | 7_2:-9002063 | Msa1047870:CDS |
| CACCATCATCTTCGGCTAGA+AGG | 0.372900 | 7_2:-9001985 | Msa1047870:CDS |
| GGTTTCCAAGTGGAAGATTT+GGG | 0.381927 | 7_2:-9002370 | Msa1047870:CDS |
| AGAACGCAAACTCGTGTTAC+TGG | 0.383573 | 7_2:+9002117 | None:intergenic |
| CCAGGTTCAAAGCTCAAATT+AGG | 0.386811 | 7_2:-9001376 | Msa1047870:CDS |
| AAGATTTCTCAGGTATCTTC+AGG | 0.388682 | 7_2:-9002280 | Msa1047870:CDS |
| TCTTTGGTGACAACAATGTT+AGG | 0.406561 | 7_2:-9001310 | Msa1047870:CDS |
| TTCAAGTTCACCATCATCTT+CGG | 0.410386 | 7_2:-9001993 | Msa1047870:CDS |
| AAATGGCTGCAATGAAGTTT+CGG | 0.412708 | 7_2:+9001958 | None:intergenic |
| GCAGCAGGCGAGGATCCACC+TGG | 0.417494 | 7_2:-9001872 | Msa1047870:CDS |
| GAATTTCCAAGAGGAAGATA+TGG | 0.421942 | 7_2:-9002434 | Msa1047870:CDS |
| TGTGCTCCATATCTTCCTCT+TGG | 0.423735 | 7_2:+9002428 | None:intergenic |
| GAGCCAGTGGATTGCCTTCA+GGG | 0.430324 | 7_2:-9001751 | Msa1047870:CDS |
| AACTTGAACCACGTATTTCA+CGG | 0.436020 | 7_2:-9002174 | Msa1047870:CDS |
| AATGAAACGATGGAACTTAG+AGG | 0.445509 | 7_2:-9002256 | Msa1047870:CDS |
| TTCACGGTCTTTGCAGTCTG+TGG | 0.446276 | 7_2:-9002158 | Msa1047870:CDS |
| GTCTAGCAAAAGCTCTATCA+AGG | 0.459498 | 7_2:-9001796 | Msa1047870:CDS |
| ATCAAAGAGTGTGGAAGACT+TGG | 0.462435 | 7_2:-9001510 | Msa1047870:CDS |
| GGTGATGCATGGTTTGCATT+CGG | 0.464325 | 7_2:-9001837 | Msa1047870:CDS |
| CCTAATTTGAGCTTTGAACC+TGG | 0.471755 | 7_2:+9001376 | None:intergenic |
| GTTGCTGTATCAACATTATC+CGG | 0.475864 | 7_2:+9001668 | None:intergenic |
| GATGACTTCAAGAGTAAAAG+TGG | 0.477583 | 7_2:-9001896 | Msa1047870:CDS |
| AATCAGATCTTCTATTCAAA+GGG | 0.490078 | 7_2:-9001619 | Msa1047870:CDS |
| AAGAGTAAAAGTGGGGCAGC+AGG | 0.504013 | 7_2:-9001887 | Msa1047870:CDS |
| GAATCAGATCTTCTATTCAA+AGG | 0.504619 | 7_2:-9001620 | Msa1047870:CDS |
| TTTGTCCCAAATCTTCCACT+TGG | 0.505382 | 7_2:+9002365 | None:intergenic |
| CATCTTCAACTGAGCTACCC+TGG | 0.511679 | 7_2:+9001468 | None:intergenic |
| AAATCATGATGAGGTTTCGT+TGG | 0.512566 | 7_2:-9001564 | Msa1047870:CDS |
| AGAAAATATGAATCCGCTGC+AGG | 0.514221 | 7_2:-9002074 | Msa1047870:CDS |
| TCGTGTAGCAAGCTAACAAA+TGG | 0.514352 | 7_2:+9001941 | None:intergenic |
| GGATCAATTGAAAGATCAAA+GGG | 0.515027 | 7_2:-9001341 | Msa1047870:CDS |
| TCACGGTCTTTGCAGTCTGT+GGG | 0.516041 | 7_2:-9002157 | Msa1047870:CDS |
| TAGCAAGCAAGCCGATGAAA+AGG | 0.516544 | 7_2:-9001705 | Msa1047870:CDS |
| TTTGGCGACGAAGATTTCTC+AGG | 0.516553 | 7_2:-9002290 | Msa1047870:CDS |
| TAACAAGCTTGAGAGCCTCC+AGG | 0.518168 | 7_2:-9001486 | Msa1047870:CDS |
| ATATGTCAATGATTCAGGAT+TGG | 0.521804 | 7_2:-9001435 | Msa1047870:CDS |
| TGGATCAATTGAAAGATCAA+AGG | 0.525605 | 7_2:-9001342 | Msa1047870:CDS |
| GGGGAAAAGAAGAGCTTGCA+TGG | 0.528358 | 7_2:-9002043 | Msa1047870:CDS |
| GTTTGCATTCGGACTCAGAC+AGG | 0.534931 | 7_2:-9001826 | Msa1047870:CDS |
| TAAAAGTGGGGCAGCAGGCG+AGG | 0.536451 | 7_2:-9001882 | Msa1047870:CDS |
| AAGCTAGTGAATTTATCGCC+AGG | 0.536727 | 7_2:-9001394 | Msa1047870:CDS |
| TCCCCTAAACCTTCCTGCAG+CGG | 0.539101 | 7_2:+9002061 | None:intergenic |
| TGAAGAAGACGAAGAAGAAG+AGG | 0.540768 | 7_2:+9002012 | None:intergenic |
| TCGTCGCCAAATCCACCTCA+TGG | 0.546424 | 7_2:+9002302 | None:intergenic |
| ATCACCGACTCTTTGTTCCC+AGG | 0.551407 | 7_2:+9001854 | None:intergenic |
| AGATATGAATTTCCATGAGG+TGG | 0.552888 | 7_2:-9002314 | Msa1047870:CDS |
| CGTCCCTGAAGGCAATCCAC+TGG | 0.554415 | 7_2:+9001748 | None:intergenic |
| TTGCATGCTTCAGAAAATGT+CGG | 0.555563 | 7_2:-9002391 | Msa1047870:CDS |
| AAAGGTTGTTGTAAAGAAGC+CGG | 0.561512 | 7_2:-9001687 | Msa1047870:CDS |
| TTCCTTCTAGCCGAAGATGA+TGG | 0.573901 | 7_2:+9001983 | None:intergenic |
| AACAAAGAGTCGGTGATGCA+TGG | 0.575868 | 7_2:-9001848 | Msa1047870:CDS |
| TCAACTTTCATCGTCCCTGA+AGG | 0.578610 | 7_2:+9001737 | None:intergenic |
| ATGAAACGATGGAACTTAGA+GGG | 0.584574 | 7_2:-9002255 | Msa1047870:CDS |
| AACAAGCTTGAGAGCCTCCA+GGG | 0.587449 | 7_2:-9001485 | Msa1047870:CDS |
| GTTAGAACAAGAAGAGCCAG+TGG | 0.587680 | 7_2:-9001764 | Msa1047870:CDS |
| GATATTGGCCTGAAATGAGA+AGG | 0.596097 | 7_2:+9002211 | None:intergenic |
| AGAAAATATGAATTTCCAAG+AGG | 0.598753 | 7_2:-9002443 | None:intergenic |
| TCTAGCAAAAGCTCTATCAA+GGG | 0.599294 | 7_2:-9001795 | Msa1047870:CDS |
| TGATTCAGGATTGGATTCTG+AGG | 0.599780 | 7_2:-9001426 | Msa1047870:CDS |
| TCCGCTGCAGGAAGGTTTAG+GGG | 0.600140 | 7_2:-9002062 | Msa1047870:CDS |
| ACCAGAACCATCAAAGAGTG+TGG | 0.601044 | 7_2:-9001519 | Msa1047870:CDS |
| TTCAGGATTGGATTCTGAGG+TGG | 0.603058 | 7_2:-9001423 | Msa1047870:CDS |
| CAGCAGGCGAGGATCCACCT+GGG | 0.605364 | 7_2:-9001871 | Msa1047870:CDS |
| ATGACTTCAAGAGTAAAAGT+GGG | 0.606366 | 7_2:-9001895 | Msa1047870:CDS |
| GGGTAGCTCAGTTGAAGATG+TGG | 0.607590 | 7_2:-9001465 | Msa1047870:CDS |
| ACCGACTCTTTGTTCCCAGG+TGG | 0.618912 | 7_2:+9001857 | None:intergenic |
| AATATGAATCCGCTGCAGGA+AGG | 0.621708 | 7_2:-9002070 | Msa1047870:CDS |
| CTAGCAAAAGCTCTATCAAG+GGG | 0.633511 | 7_2:-9001794 | Msa1047870:CDS |
| AGAAAATGTCGGTTTCCAAG+TGG | 0.639123 | 7_2:-9002380 | Msa1047870:CDS |
| TGAAGATATGAATTTCCATG+AGG | 0.658083 | 7_2:-9002317 | Msa1047870:CDS |
| TCCACCTGGGAACAAAGAGT+CGG | 0.658869 | 7_2:-9001858 | Msa1047870:CDS |
| ATCTTCAGGAAATGAAACGA+TGG | 0.671835 | 7_2:-9002266 | Msa1047870:CDS |
| TGCAAAGACCGTGAAATACG+TGG | 0.690937 | 7_2:+9002166 | None:intergenic |
| TGACTTCAAGAGTAAAAGTG+GGG | 0.720933 | 7_2:-9001894 | Msa1047870:CDS |
| CTTCAACTGAGCTACCCTGG+AGG | 0.729906 | 7_2:+9001471 | None:intergenic |
| TAGCAAAAGCTCTATCAAGG+GGG | 0.752717 | 7_2:-9001793 | Msa1047870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATATCTTCAGAAAA+AGG | + | chr7_2:9001421-9001440 | None:intergenic | 20.0% |
| !! | AAATTCATATCTTCAGAAAA+AGG | + | chr7_2:9001421-9001440 | None:intergenic | 20.0% |
| ! | AATCAGATCTTCTATTCAAA+GGG | - | chr7_2:9002124-9002143 | Msa1047870:CDS | 25.0% |
| ! | AATCAGATCTTCTATTCAAA+GGG | - | chr7_2:9002124-9002143 | Msa1047870:CDS | 25.0% |
| !!! | ATTTTCTGAAGCATGCAAAT+AGG | + | chr7_2:9001350-9001369 | None:intergenic | 30.0% |
| TGAAGATATGAATTTCCATG+AGG | - | chr7_2:9001426-9001445 | Msa1047870:CDS | 30.0% | |
| TGAGTTTCATCAACAGATAT+TGG | + | chr7_2:9001550-9001569 | None:intergenic | 30.0% | |
| TTCTGATGAAACAGAATCTA+TGG | + | chr7_2:9001653-9001672 | None:intergenic | 30.0% | |
| ATGACTTCAAGAGTAAAAGT+GGG | - | chr7_2:9001848-9001867 | Msa1047870:CDS | 30.0% | |
| ! | CTTTACAACAACCTTTTCAT+CGG | + | chr7_2:9002052-9002071 | None:intergenic | 30.0% |
| GAATCAGATCTTCTATTCAA+AGG | - | chr7_2:9002123-9002142 | Msa1047870:CDS | 30.0% | |
| ! | CTATTTTCCAAATCATGATG+AGG | - | chr7_2:9002170-9002189 | Msa1047870:CDS | 30.0% |
| TCTGAATATGTCAATGATTC+AGG | - | chr7_2:9002303-9002322 | Msa1047870:CDS | 30.0% | |
| ATATGTCAATGATTCAGGAT+TGG | - | chr7_2:9002308-9002327 | Msa1047870:CDS | 30.0% | |
| CAAATTAGGCTTCAGAAAAT+TGG | - | chr7_2:9002381-9002400 | Msa1047870:CDS | 30.0% | |
| TGGATCAATTGAAAGATCAA+AGG | - | chr7_2:9002401-9002420 | Msa1047870:CDS | 30.0% | |
| GGATCAATTGAAAGATCAAA+GGG | - | chr7_2:9002402-9002421 | Msa1047870:CDS | 30.0% | |
| TCAAAGGGTCAAAAAATCTT+TGG | - | chr7_2:9002417-9002436 | Msa1047870:CDS | 30.0% | |
| !!! | ATTTTCTGAAGCATGCAAAT+AGG | + | chr7_2:9001350-9001369 | None:intergenic | 30.0% |
| TGAAGATATGAATTTCCATG+AGG | - | chr7_2:9001426-9001445 | Msa1047870:CDS | 30.0% | |
| TGAGTTTCATCAACAGATAT+TGG | + | chr7_2:9001550-9001569 | None:intergenic | 30.0% | |
| TTCTGATGAAACAGAATCTA+TGG | + | chr7_2:9001653-9001672 | None:intergenic | 30.0% | |
| ATGACTTCAAGAGTAAAAGT+GGG | - | chr7_2:9001848-9001867 | Msa1047870:CDS | 30.0% | |
| ! | CTTTACAACAACCTTTTCAT+CGG | + | chr7_2:9002052-9002071 | None:intergenic | 30.0% |
| GAATCAGATCTTCTATTCAA+AGG | - | chr7_2:9002123-9002142 | Msa1047870:CDS | 30.0% | |
| ! | CTATTTTCCAAATCATGATG+AGG | - | chr7_2:9002170-9002189 | Msa1047870:CDS | 30.0% |
| TCTGAATATGTCAATGATTC+AGG | - | chr7_2:9002303-9002322 | Msa1047870:CDS | 30.0% | |
| ATATGTCAATGATTCAGGAT+TGG | - | chr7_2:9002308-9002327 | Msa1047870:CDS | 30.0% | |
| CAAATTAGGCTTCAGAAAAT+TGG | - | chr7_2:9002381-9002400 | Msa1047870:CDS | 30.0% | |
| TGGATCAATTGAAAGATCAA+AGG | - | chr7_2:9002401-9002420 | Msa1047870:CDS | 30.0% | |
| GGATCAATTGAAAGATCAAA+GGG | - | chr7_2:9002402-9002421 | Msa1047870:CDS | 30.0% | |
| TCAAAGGGTCAAAAAATCTT+TGG | - | chr7_2:9002417-9002436 | Msa1047870:CDS | 30.0% | |
| GAATTTCCAAGAGGAAGATA+TGG | - | chr7_2:9001309-9001328 | Msa1047870:CDS | 35.0% | |
| TTGCATGCTTCAGAAAATGT+CGG | - | chr7_2:9001352-9001371 | Msa1047870:CDS | 35.0% | |
| AGATATGAATTTCCATGAGG+TGG | - | chr7_2:9001429-9001448 | Msa1047870:CDS | 35.0% | |
| AAGATTTCTCAGGTATCTTC+AGG | - | chr7_2:9001463-9001482 | Msa1047870:CDS | 35.0% | |
| ATCTTCAGGAAATGAAACGA+TGG | - | chr7_2:9001477-9001496 | Msa1047870:CDS | 35.0% | |
| AATGAAACGATGGAACTTAG+AGG | - | chr7_2:9001487-9001506 | Msa1047870:CDS | 35.0% | |
| ATGAAACGATGGAACTTAGA+GGG | - | chr7_2:9001488-9001507 | Msa1047870:CDS | 35.0% | |
| TTTCTCATCCTTCTCATTTC+AGG | - | chr7_2:9001524-9001543 | Msa1047870:CDS | 35.0% | |
| AACTTGAACCACGTATTTCA+CGG | - | chr7_2:9001569-9001588 | Msa1047870:CDS | 35.0% | |
| ! | TTCAAGTTCACCATCATCTT+CGG | - | chr7_2:9001750-9001769 | Msa1047870:CDS | 35.0% |
| AAATGGCTGCAATGAAGTTT+CGG | + | chr7_2:9001788-9001807 | None:intergenic | 35.0% | |
| GATGACTTCAAGAGTAAAAG+TGG | - | chr7_2:9001847-9001866 | Msa1047870:CDS | 35.0% | |
| TGACTTCAAGAGTAAAAGTG+GGG | - | chr7_2:9001849-9001868 | Msa1047870:CDS | 35.0% | |
| TCTAGCAAAAGCTCTATCAA+GGG | - | chr7_2:9001948-9001967 | Msa1047870:CDS | 35.0% | |
| AAAGGTTGTTGTAAAGAAGC+CGG | - | chr7_2:9002056-9002075 | Msa1047870:CDS | 35.0% | |
| GTTGCTGTATCAACATTATC+CGG | + | chr7_2:9002078-9002097 | None:intergenic | 35.0% | |
| AACGAAACCTCATCATGATT+TGG | + | chr7_2:9002180-9002199 | None:intergenic | 35.0% | |
| AAATCATGATGAGGTTTCGT+TGG | - | chr7_2:9002179-9002198 | Msa1047870:CDS | 35.0% | |
| ! | TCTTTGGTGACAACAATGTT+AGG | - | chr7_2:9002433-9002452 | Msa1047870:CDS | 35.0% |
| GAATTTCCAAGAGGAAGATA+TGG | - | chr7_2:9001309-9001328 | Msa1047870:CDS | 35.0% | |
| TTGCATGCTTCAGAAAATGT+CGG | - | chr7_2:9001352-9001371 | Msa1047870:CDS | 35.0% | |
| AGATATGAATTTCCATGAGG+TGG | - | chr7_2:9001429-9001448 | Msa1047870:CDS | 35.0% | |
| AAGATTTCTCAGGTATCTTC+AGG | - | chr7_2:9001463-9001482 | Msa1047870:CDS | 35.0% | |
| ATCTTCAGGAAATGAAACGA+TGG | - | chr7_2:9001477-9001496 | Msa1047870:CDS | 35.0% | |
| AATGAAACGATGGAACTTAG+AGG | - | chr7_2:9001487-9001506 | Msa1047870:CDS | 35.0% | |
| ATGAAACGATGGAACTTAGA+GGG | - | chr7_2:9001488-9001507 | Msa1047870:CDS | 35.0% | |
| TTTCTCATCCTTCTCATTTC+AGG | - | chr7_2:9001524-9001543 | Msa1047870:CDS | 35.0% | |
| AACTTGAACCACGTATTTCA+CGG | - | chr7_2:9001569-9001588 | Msa1047870:CDS | 35.0% | |
| ! | TTCAAGTTCACCATCATCTT+CGG | - | chr7_2:9001750-9001769 | Msa1047870:CDS | 35.0% |
| AAATGGCTGCAATGAAGTTT+CGG | + | chr7_2:9001788-9001807 | None:intergenic | 35.0% | |
| GATGACTTCAAGAGTAAAAG+TGG | - | chr7_2:9001847-9001866 | Msa1047870:CDS | 35.0% | |
| TGACTTCAAGAGTAAAAGTG+GGG | - | chr7_2:9001849-9001868 | Msa1047870:CDS | 35.0% | |
| TCTAGCAAAAGCTCTATCAA+GGG | - | chr7_2:9001948-9001967 | Msa1047870:CDS | 35.0% | |
| AAAGGTTGTTGTAAAGAAGC+CGG | - | chr7_2:9002056-9002075 | Msa1047870:CDS | 35.0% | |
| GTTGCTGTATCAACATTATC+CGG | + | chr7_2:9002078-9002097 | None:intergenic | 35.0% | |
| AACGAAACCTCATCATGATT+TGG | + | chr7_2:9002180-9002199 | None:intergenic | 35.0% | |
| AAATCATGATGAGGTTTCGT+TGG | - | chr7_2:9002179-9002198 | Msa1047870:CDS | 35.0% | |
| ! | TCTTTGGTGACAACAATGTT+AGG | - | chr7_2:9002433-9002452 | Msa1047870:CDS | 35.0% |
| !! | AGAAAATGTCGGTTTCCAAG+TGG | - | chr7_2:9001363-9001382 | Msa1047870:CDS | 40.0% |
| GGTTTCCAAGTGGAAGATTT+GGG | - | chr7_2:9001373-9001392 | Msa1047870:CDS | 40.0% | |
| TTTGTCCCAAATCTTCCACT+TGG | + | chr7_2:9001381-9001400 | None:intergenic | 40.0% | |
| ! | GAATTTCCATGAGGTGGATT+TGG | - | chr7_2:9001435-9001454 | Msa1047870:CDS | 40.0% |
| ! | GATATTGGCCTGAAATGAGA+AGG | + | chr7_2:9001535-9001554 | None:intergenic | 40.0% |
| AGAAAATATGAATCCGCTGC+AGG | - | chr7_2:9001669-9001688 | Msa1047870:CDS | 40.0% | |
| TGAAGAAGACGAAGAAGAAG+AGG | + | chr7_2:9001734-9001753 | None:intergenic | 40.0% | |
| TCGTGTAGCAAGCTAACAAA+TGG | + | chr7_2:9001805-9001824 | None:intergenic | 40.0% | |
| ! | AGAGCTTTTGCTAGACTTGT+TGG | + | chr7_2:9001943-9001962 | None:intergenic | 40.0% |
| GTCTAGCAAAAGCTCTATCA+AGG | - | chr7_2:9001947-9001966 | Msa1047870:CDS | 40.0% | |
| CTAGCAAAAGCTCTATCAAG+GGG | - | chr7_2:9001949-9001968 | Msa1047870:CDS | 40.0% | |
| TAGCAAAAGCTCTATCAAGG+GGG | - | chr7_2:9001950-9001969 | Msa1047870:CDS | 40.0% | |
| AAGTCTTCCACACTCTTTGA+TGG | + | chr7_2:9002234-9002253 | None:intergenic | 40.0% | |
| ! | ATCAAAGAGTGTGGAAGACT+TGG | - | chr7_2:9002233-9002252 | Msa1047870:CDS | 40.0% |
| TGATTCAGGATTGGATTCTG+AGG | - | chr7_2:9002317-9002336 | Msa1047870:CDS | 40.0% | |
| AAGCTAGTGAATTTATCGCC+AGG | - | chr7_2:9002349-9002368 | Msa1047870:CDS | 40.0% | |
| !! | CCTAATTTGAGCTTTGAACC+TGG | + | chr7_2:9002370-9002389 | None:intergenic | 40.0% |
| CCAGGTTCAAAGCTCAAATT+AGG | - | chr7_2:9002367-9002386 | Msa1047870:CDS | 40.0% | |
| !! | AGAAAATGTCGGTTTCCAAG+TGG | - | chr7_2:9001363-9001382 | Msa1047870:CDS | 40.0% |
| GGTTTCCAAGTGGAAGATTT+GGG | - | chr7_2:9001373-9001392 | Msa1047870:CDS | 40.0% | |
| TTTGTCCCAAATCTTCCACT+TGG | + | chr7_2:9001381-9001400 | None:intergenic | 40.0% | |
| ! | GAATTTCCATGAGGTGGATT+TGG | - | chr7_2:9001435-9001454 | Msa1047870:CDS | 40.0% |
| ! | GATATTGGCCTGAAATGAGA+AGG | + | chr7_2:9001535-9001554 | None:intergenic | 40.0% |
| AGAAAATATGAATCCGCTGC+AGG | - | chr7_2:9001669-9001688 | Msa1047870:CDS | 40.0% | |
| TGAAGAAGACGAAGAAGAAG+AGG | + | chr7_2:9001734-9001753 | None:intergenic | 40.0% | |
| TCGTGTAGCAAGCTAACAAA+TGG | + | chr7_2:9001805-9001824 | None:intergenic | 40.0% | |
| ! | AGAGCTTTTGCTAGACTTGT+TGG | + | chr7_2:9001943-9001962 | None:intergenic | 40.0% |
| GTCTAGCAAAAGCTCTATCA+AGG | - | chr7_2:9001947-9001966 | Msa1047870:CDS | 40.0% | |
| CTAGCAAAAGCTCTATCAAG+GGG | - | chr7_2:9001949-9001968 | Msa1047870:CDS | 40.0% | |
| TAGCAAAAGCTCTATCAAGG+GGG | - | chr7_2:9001950-9001969 | Msa1047870:CDS | 40.0% | |
| AAGTCTTCCACACTCTTTGA+TGG | + | chr7_2:9002234-9002253 | None:intergenic | 40.0% | |
| ! | ATCAAAGAGTGTGGAAGACT+TGG | - | chr7_2:9002233-9002252 | Msa1047870:CDS | 40.0% |
| TGATTCAGGATTGGATTCTG+AGG | - | chr7_2:9002317-9002336 | Msa1047870:CDS | 40.0% | |
| AAGCTAGTGAATTTATCGCC+AGG | - | chr7_2:9002349-9002368 | Msa1047870:CDS | 40.0% | |
| !! | CCTAATTTGAGCTTTGAACC+TGG | + | chr7_2:9002370-9002389 | None:intergenic | 40.0% |
| CCAGGTTCAAAGCTCAAATT+AGG | - | chr7_2:9002367-9002386 | Msa1047870:CDS | 40.0% | |
| TGTGCTCCATATCTTCCTCT+TGG | + | chr7_2:9001318-9001337 | None:intergenic | 45.0% | |
| CGGTTTCCAAGTGGAAGATT+TGG | - | chr7_2:9001372-9001391 | Msa1047870:CDS | 45.0% | |
| TTTGGCGACGAAGATTTCTC+AGG | - | chr7_2:9001453-9001472 | Msa1047870:CDS | 45.0% | |
| TGCAAAGACCGTGAAATACG+TGG | + | chr7_2:9001580-9001599 | None:intergenic | 45.0% | |
| AGAACGCAAACTCGTGTTAC+TGG | + | chr7_2:9001629-9001648 | None:intergenic | 45.0% | |
| AATATGAATCCGCTGCAGGA+AGG | - | chr7_2:9001673-9001692 | Msa1047870:CDS | 45.0% | |
| TTCCTTCTAGCCGAAGATGA+TGG | + | chr7_2:9001763-9001782 | None:intergenic | 45.0% | |
| AACAAAGAGTCGGTGATGCA+TGG | - | chr7_2:9001895-9001914 | Msa1047870:CDS | 45.0% | |
| ! | GGTGATGCATGGTTTGCATT+CGG | - | chr7_2:9001906-9001925 | Msa1047870:CDS | 45.0% |
| GTTAGAACAAGAAGAGCCAG+TGG | - | chr7_2:9001979-9001998 | Msa1047870:CDS | 45.0% | |
| TCAACTTTCATCGTCCCTGA+AGG | + | chr7_2:9002009-9002028 | None:intergenic | 45.0% | |
| TAGCAAGCAAGCCGATGAAA+AGG | - | chr7_2:9002038-9002057 | Msa1047870:CDS | 45.0% | |
| ACCAGAACCATCAAAGAGTG+TGG | - | chr7_2:9002224-9002243 | Msa1047870:CDS | 45.0% | |
| ! | TCCACACTCTTTGATGGTTC+TGG | + | chr7_2:9002228-9002247 | None:intergenic | 45.0% |
| ! | TTCAGGATTGGATTCTGAGG+TGG | - | chr7_2:9002320-9002339 | Msa1047870:CDS | 45.0% |
| TGTGCTCCATATCTTCCTCT+TGG | + | chr7_2:9001318-9001337 | None:intergenic | 45.0% | |
| CGGTTTCCAAGTGGAAGATT+TGG | - | chr7_2:9001372-9001391 | Msa1047870:CDS | 45.0% | |
| TTTGGCGACGAAGATTTCTC+AGG | - | chr7_2:9001453-9001472 | Msa1047870:CDS | 45.0% | |
| TGCAAAGACCGTGAAATACG+TGG | + | chr7_2:9001580-9001599 | None:intergenic | 45.0% | |
| AGAACGCAAACTCGTGTTAC+TGG | + | chr7_2:9001629-9001648 | None:intergenic | 45.0% | |
| AATATGAATCCGCTGCAGGA+AGG | - | chr7_2:9001673-9001692 | Msa1047870:CDS | 45.0% | |
| TTCCTTCTAGCCGAAGATGA+TGG | + | chr7_2:9001763-9001782 | None:intergenic | 45.0% | |
| AACAAAGAGTCGGTGATGCA+TGG | - | chr7_2:9001895-9001914 | Msa1047870:CDS | 45.0% | |
| ! | GGTGATGCATGGTTTGCATT+CGG | - | chr7_2:9001906-9001925 | Msa1047870:CDS | 45.0% |
| GTTAGAACAAGAAGAGCCAG+TGG | - | chr7_2:9001979-9001998 | Msa1047870:CDS | 45.0% | |
| TCAACTTTCATCGTCCCTGA+AGG | + | chr7_2:9002009-9002028 | None:intergenic | 45.0% | |
| TAGCAAGCAAGCCGATGAAA+AGG | - | chr7_2:9002038-9002057 | Msa1047870:CDS | 45.0% | |
| ACCAGAACCATCAAAGAGTG+TGG | - | chr7_2:9002224-9002243 | Msa1047870:CDS | 45.0% | |
| ! | TCCACACTCTTTGATGGTTC+TGG | + | chr7_2:9002228-9002247 | None:intergenic | 45.0% |
| ! | TTCAGGATTGGATTCTGAGG+TGG | - | chr7_2:9002320-9002339 | Msa1047870:CDS | 45.0% |
| TTCACGGTCTTTGCAGTCTG+TGG | - | chr7_2:9001585-9001604 | Msa1047870:CDS | 50.0% | |
| TCACGGTCTTTGCAGTCTGT+GGG | - | chr7_2:9001586-9001605 | Msa1047870:CDS | 50.0% | |
| AATCCGCTGCAGGAAGGTTT+AGG | - | chr7_2:9001679-9001698 | Msa1047870:CDS | 50.0% | |
| ATCCGCTGCAGGAAGGTTTA+GGG | - | chr7_2:9001680-9001699 | Msa1047870:CDS | 50.0% | |
| GGGGAAAAGAAGAGCTTGCA+TGG | - | chr7_2:9001700-9001719 | Msa1047870:CDS | 50.0% | |
| CACCATCATCTTCGGCTAGA+AGG | - | chr7_2:9001758-9001777 | Msa1047870:CDS | 50.0% | |
| AAGAGTAAAAGTGGGGCAGC+AGG | - | chr7_2:9001856-9001875 | Msa1047870:CDS | 50.0% | |
| TCCACCTGGGAACAAAGAGT+CGG | - | chr7_2:9001885-9001904 | Msa1047870:CDS | 50.0% | |
| !! | ATCACCGACTCTTTGTTCCC+AGG | + | chr7_2:9001892-9001911 | None:intergenic | 50.0% |
| GTTTGCATTCGGACTCAGAC+AGG | - | chr7_2:9001917-9001936 | Msa1047870:CDS | 50.0% | |
| TAACAAGCTTGAGAGCCTCC+AGG | - | chr7_2:9002257-9002276 | Msa1047870:CDS | 50.0% | |
| AACAAGCTTGAGAGCCTCCA+GGG | - | chr7_2:9002258-9002277 | Msa1047870:CDS | 50.0% | |
| CATCTTCAACTGAGCTACCC+TGG | + | chr7_2:9002278-9002297 | None:intergenic | 50.0% | |
| GGGTAGCTCAGTTGAAGATG+TGG | - | chr7_2:9002278-9002297 | Msa1047870:CDS | 50.0% | |
| TTCACGGTCTTTGCAGTCTG+TGG | - | chr7_2:9001585-9001604 | Msa1047870:CDS | 50.0% | |
| TCACGGTCTTTGCAGTCTGT+GGG | - | chr7_2:9001586-9001605 | Msa1047870:CDS | 50.0% | |
| AATCCGCTGCAGGAAGGTTT+AGG | - | chr7_2:9001679-9001698 | Msa1047870:CDS | 50.0% | |
| ATCCGCTGCAGGAAGGTTTA+GGG | - | chr7_2:9001680-9001699 | Msa1047870:CDS | 50.0% | |
| GGGGAAAAGAAGAGCTTGCA+TGG | - | chr7_2:9001700-9001719 | Msa1047870:CDS | 50.0% | |
| CACCATCATCTTCGGCTAGA+AGG | - | chr7_2:9001758-9001777 | Msa1047870:CDS | 50.0% | |
| AAGAGTAAAAGTGGGGCAGC+AGG | - | chr7_2:9001856-9001875 | Msa1047870:CDS | 50.0% | |
| TCCACCTGGGAACAAAGAGT+CGG | - | chr7_2:9001885-9001904 | Msa1047870:CDS | 50.0% | |
| !! | ATCACCGACTCTTTGTTCCC+AGG | + | chr7_2:9001892-9001911 | None:intergenic | 50.0% |
| GTTTGCATTCGGACTCAGAC+AGG | - | chr7_2:9001917-9001936 | Msa1047870:CDS | 50.0% | |
| TAACAAGCTTGAGAGCCTCC+AGG | - | chr7_2:9002257-9002276 | Msa1047870:CDS | 50.0% | |
| AACAAGCTTGAGAGCCTCCA+GGG | - | chr7_2:9002258-9002277 | Msa1047870:CDS | 50.0% | |
| CATCTTCAACTGAGCTACCC+TGG | + | chr7_2:9002278-9002297 | None:intergenic | 50.0% | |
| GGGTAGCTCAGTTGAAGATG+TGG | - | chr7_2:9002278-9002297 | Msa1047870:CDS | 50.0% | |
| TCGTCGCCAAATCCACCTCA+TGG | + | chr7_2:9001444-9001463 | None:intergenic | 55.0% | |
| TCCGCTGCAGGAAGGTTTAG+GGG | - | chr7_2:9001681-9001700 | Msa1047870:CDS | 55.0% | |
| TCCCCTAAACCTTCCTGCAG+CGG | + | chr7_2:9001685-9001704 | None:intergenic | 55.0% | |
| ! | ACCGACTCTTTGTTCCCAGG+TGG | + | chr7_2:9001889-9001908 | None:intergenic | 55.0% |
| !! | AGAGCCAGTGGATTGCCTTC+AGG | - | chr7_2:9001991-9002010 | Msa1047870:CDS | 55.0% |
| !! | GAGCCAGTGGATTGCCTTCA+GGG | - | chr7_2:9001992-9002011 | Msa1047870:CDS | 55.0% |
| CTTCAACTGAGCTACCCTGG+AGG | + | chr7_2:9002275-9002294 | None:intergenic | 55.0% | |
| TCGTCGCCAAATCCACCTCA+TGG | + | chr7_2:9001444-9001463 | None:intergenic | 55.0% | |
| TCCGCTGCAGGAAGGTTTAG+GGG | - | chr7_2:9001681-9001700 | Msa1047870:CDS | 55.0% | |
| TCCCCTAAACCTTCCTGCAG+CGG | + | chr7_2:9001685-9001704 | None:intergenic | 55.0% | |
| ! | ACCGACTCTTTGTTCCCAGG+TGG | + | chr7_2:9001889-9001908 | None:intergenic | 55.0% |
| !! | AGAGCCAGTGGATTGCCTTC+AGG | - | chr7_2:9001991-9002010 | Msa1047870:CDS | 55.0% |
| !! | GAGCCAGTGGATTGCCTTCA+GGG | - | chr7_2:9001992-9002011 | Msa1047870:CDS | 55.0% |
| CTTCAACTGAGCTACCCTGG+AGG | + | chr7_2:9002275-9002294 | None:intergenic | 55.0% | |
| TAAAAGTGGGGCAGCAGGCG+AGG | - | chr7_2:9001861-9001880 | Msa1047870:CDS | 60.0% | |
| CGTCCCTGAAGGCAATCCAC+TGG | + | chr7_2:9001998-9002017 | None:intergenic | 60.0% | |
| TAAAAGTGGGGCAGCAGGCG+AGG | - | chr7_2:9001861-9001880 | Msa1047870:CDS | 60.0% | |
| CGTCCCTGAAGGCAATCCAC+TGG | + | chr7_2:9001998-9002017 | None:intergenic | 60.0% | |
| CAGCAGGCGAGGATCCACCT+GGG | - | chr7_2:9001872-9001891 | Msa1047870:CDS | 65.0% | |
| CAGCAGGCGAGGATCCACCT+GGG | - | chr7_2:9001872-9001891 | Msa1047870:CDS | 65.0% | |
| GCAGCAGGCGAGGATCCACC+TGG | - | chr7_2:9001871-9001890 | Msa1047870:CDS | 70.0% | |
| GCAGCAGGCGAGGATCCACC+TGG | - | chr7_2:9001871-9001890 | Msa1047870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 9001307 | 9002458 | 9001307 | ID=Msa1047870;Name=Msa1047870 |
| chr7_2 | mRNA | 9001307 | 9002458 | 9001307 | ID=Msa1047870-mRNA-1;Parent=Msa1047870;Name=Msa1047870-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|383 |
| chr7_2 | exon | 9001307 | 9002458 | 9001307 | ID=Msa1047870-mRNA-1:exon:2408;Parent=Msa1047870-mRNA-1 |
| chr7_2 | CDS | 9001307 | 9002458 | 9001307 | ID=Msa1047870-mRNA-1:cds;Parent=Msa1047870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
