AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0723130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0723130 MtrunA17_Chr5g0413951 94.000 350 21 0 1 350 1 350 0.0 635
Msa0723130 MtrunA17_Chr5g0413941 85.143 350 52 0 1 350 1 350 0.0 593
Msa0723130 MtrunA17_Chr5g0413931 73.684 342 90 0 8 349 7 348 0.0 522
Msa0723130 MtrunA17_Chr5g0413921 69.653 346 100 1 1 346 1 341 5.63e-176 492
Msa0723130 MtrunA17_Chr7g0227921 44.152 342 184 3 12 349 16 354 4.55e-86 264
Msa0723130 MtrunA17_Chr3g0126101 42.353 340 190 5 12 350 11 345 6.24e-83 255
Msa0723130 MtrunA17_Chr4g0059311 42.012 338 191 4 12 345 16 352 1.14e-80 249
Msa0723130 MtrunA17_Chr5g0413961 39.763 337 197 3 12 346 19 351 2.72e-77 241
Msa0723130 MtrunA17_Chr6g0451251 45.614 342 176 5 12 347 17 354 3.34e-76 239
Msa0723130 MtrunA17_Chr1g0150151 38.824 340 199 5 10 345 14 348 1.08e-75 237
Msa0723130 MtrunA17_Chr6g0451201 43.491 338 180 5 12 345 17 347 7.00e-75 235
Msa0723130 MtrunA17_Chr6g0451211 41.056 341 189 6 12 345 17 352 1.19e-74 234
Msa0723130 MtrunA17_Chr6g0451261 41.275 298 173 2 10 306 14 310 1.50e-70 236
Msa0723130 MtrunA17_Chr6g0451171 39.024 328 185 4 25 345 30 349 1.27e-67 216
Msa0723130 MtrunA17_Chr3g0126091 34.795 342 215 6 12 346 16 356 1.19e-60 198
Msa0723130 MtrunA17_Chr7g0255561 35.802 324 196 5 12 327 19 338 5.57e-59 195
Msa0723130 MtrunA17_Chr7g0255581 35.802 324 196 5 12 327 19 338 5.57e-59 195
Msa0723130 MtrunA17_Chr3g0114731 36.176 340 210 5 12 350 23 356 1.62e-58 194
Msa0723130 MtrunA17_Chr3g0081511 33.025 324 201 5 12 326 22 338 3.03e-54 182
Msa0723130 MtrunA17_Chr8g0354121 30.460 348 227 6 10 347 16 358 2.85e-52 177
Msa0723130 MtrunA17_Chr3g0114691 33.115 305 200 3 31 332 44 347 6.78e-52 176
Msa0723130 MtrunA17_Chr1g0160171 33.651 315 207 2 12 325 21 334 1.59e-51 175
Msa0723130 MtrunA17_Chr3g0081421 32.110 327 201 7 12 325 22 340 3.55e-51 175
Msa0723130 MtrunA17_Chr1g0155761 30.000 350 219 6 12 339 26 371 2.88e-50 172
Msa0723130 MtrunA17_Chr6g0483401 31.269 323 209 5 33 349 36 351 5.85e-50 171
Msa0723130 MtrunA17_Chr1g0182291 32.000 325 208 7 23 339 31 350 4.12e-49 168
Msa0723130 MtrunA17_Chr3g0142131 29.223 373 227 7 12 350 25 394 1.53e-48 168
Msa0723130 MtrunA17_Chr3g0129601 31.348 319 214 3 25 339 47 364 4.03e-47 163
Msa0723130 MtrunA17_Chr1g0164831 32.381 315 205 3 25 333 21 333 5.46e-47 162
Msa0723130 MtrunA17_Chr4g0050881 32.676 355 202 8 12 344 14 353 7.26e-47 162
Msa0723130 MtrunA17_Chr6g0463971 32.209 326 215 4 12 333 21 344 8.56e-47 162
Msa0723130 MtrunA17_Chr7g0263101 32.372 312 198 7 21 325 27 332 1.80e-46 162
Msa0723130 MtrunA17_Chr1g0160181 32.710 321 209 6 12 327 23 341 2.37e-46 162
Msa0723130 MtrunA17_Chr8g0383731 33.746 323 202 6 25 338 23 342 6.04e-46 160
Msa0723130 MtrunA17_Chr5g0408031 29.464 336 217 5 12 329 15 348 6.37e-46 160
Msa0723130 MtrunA17_Chr2g0278561 30.086 349 220 5 5 341 13 349 6.57e-46 160
Msa0723130 MtrunA17_Chr8g0334761 30.841 321 209 4 12 325 15 329 1.16e-45 159
Msa0723130 MtrunA17_Chr6g0451191 37.662 231 131 4 121 345 1 224 1.59e-45 155
Msa0723130 MtrunA17_Chr2g0290611 31.975 319 209 4 12 325 17 332 1.29e-44 157
Msa0723130 MtrunA17_Chr3g0114711 28.836 378 224 9 13 350 20 392 1.87e-44 157
Msa0723130 MtrunA17_Chr1g0186611 27.928 333 216 6 27 350 36 353 3.84e-44 155
Msa0723130 MtrunA17_Chr1g0186571 28.614 332 218 5 12 334 18 339 3.99e-44 155
Msa0723130 MtrunA17_Chr5g0408001 29.513 349 227 6 12 343 15 361 1.10e-43 155
Msa0723130 MtrunA17_Chr4g0050891 31.677 322 213 5 5 320 11 331 5.33e-43 152
Msa0723130 MtrunA17_Chr2g0278551 32.024 331 211 5 12 331 17 344 6.27e-43 153
Msa0723130 MtrunA17_Chr5g0408041 29.060 351 228 6 16 347 20 368 6.83e-43 152
Msa0723130 MtrunA17_Chr2g0284261 30.380 316 214 2 12 325 13 324 9.68e-43 152
Msa0723130 MtrunA17_Chr3g0129591 31.677 322 202 5 16 325 14 329 1.58e-42 151
Msa0723130 MtrunA17_Chr5g0407991 28.455 369 237 8 1 347 1 364 2.30e-42 151
Msa0723130 MtrunA17_Chr1g0171301 29.934 304 210 3 27 328 36 338 2.72e-42 150
Msa0723130 MtrunA17_Chr7g0271561 30.124 322 216 4 12 325 12 332 3.71e-42 150
Msa0723130 MtrunA17_Chr1g0186641 27.273 319 221 6 27 340 33 345 8.52e-42 149
Msa0723130 MtrunA17_Chr8g0369841 29.042 334 219 5 10 327 12 343 1.10e-41 149
Msa0723130 MtrunA17_Chr4g0073241 31.402 328 209 5 27 346 28 347 1.99e-41 148
Msa0723130 MtrunA17_Chr1g0184221 25.519 337 231 3 12 333 21 352 3.50e-41 148
Msa0723130 MtrunA17_Chr3g0129571 29.573 328 218 7 16 334 16 339 1.36e-40 146
Msa0723130 MtrunA17_Chr1g0186601 27.596 337 225 5 12 339 21 347 2.64e-40 145
Msa0723130 MtrunA17_Chr3g0114701 31.790 324 204 6 12 325 14 330 3.58e-40 145
Msa0723130 MtrunA17_Chr2g0278541 29.012 324 218 4 12 325 17 338 4.01e-40 145
Msa0723130 MtrunA17_Chr4g0050941 29.330 358 230 6 12 347 17 373 5.10e-40 145
Msa0723130 MtrunA17_Chr5g0407971 26.705 352 238 6 12 346 16 364 7.35e-40 144
Msa0723130 MtrunA17_Chr1g0186561 28.829 333 217 6 12 334 21 343 1.23e-39 143
Msa0723130 MtrunA17_Chr2g0332001 29.006 362 232 7 5 350 36 388 5.48e-39 142
Msa0723130 MtrunA17_Chr2g0310441 29.195 298 204 3 32 325 35 329 1.05e-38 141
Msa0723130 MtrunA17_Chr1g0160111 30.063 316 207 6 33 340 33 342 2.61e-38 140
Msa0723130 MtrunA17_Chr4g0051021 28.267 329 231 4 12 337 19 345 2.34e-36 135
Msa0723130 MtrunA17_Chr5g0441761 26.970 330 234 3 6 334 13 336 1.64e-35 132
Msa0723130 MtrunA17_Chr8g0334751 29.395 347 230 6 12 347 16 358 8.92e-35 130
Msa0723130 MtrunA17_Chr8g0334771 29.492 295 207 1 32 325 35 329 1.06e-33 128
Msa0723130 MtrunA17_Chr5g0428881 25.806 341 248 4 11 347 22 361 1.29e-33 128
Msa0723130 MtrunA17_Chr3g0084091 30.830 253 172 3 88 338 11 262 1.49e-32 123
Msa0723130 MtrunA17_Chr3g0129581 28.616 318 217 4 16 325 14 329 2.06e-32 124
Msa0723130 MtrunA17_Chr1g0211801 29.876 241 166 2 25 264 29 267 4.71e-32 121
Msa0723130 MtrunA17_Chr1g0177221 30.328 244 166 4 12 253 23 264 3.26e-29 113
Msa0723130 MtrunA17_Chr4g0056081 25.532 329 238 6 12 334 19 346 3.30e-29 115
Msa0723130 MtrunA17_Chr5g0399281 25.364 343 238 6 12 343 13 348 1.67e-28 113
Msa0723130 MtrunA17_Chr5g0404811 28.571 217 147 3 120 331 6 219 7.50e-28 109
Msa0723130 MtrunA17_Chr5g0429001 29.268 246 163 2 88 325 32 274 9.49e-28 110
Msa0723130 MtrunA17_Chr4g0050931 25.215 349 210 8 5 345 10 315 2.66e-27 109
Msa0723130 MtrunA17_Chr4g0051001 27.609 297 208 4 12 303 36 330 9.27e-26 105
Msa0723130 MtrunA17_Chr2g0278021 29.515 227 151 3 121 340 1 225 8.40e-24 99.4
Msa0723130 MtrunA17_Chr6g0451181 43.119 109 62 0 12 120 17 125 1.98e-20 85.9
Msa0723130 MtrunA17_Chr6g0451241 48.421 95 45 2 253 344 7 100 3.17e-20 85.1
Msa0723130 MtrunA17_Chr8g0334721 37.037 108 68 0 218 325 2 109 9.94e-20 85.1
Msa0723130 MtrunA17_Chr8g0334711 26.702 191 140 0 12 202 15 205 4.30e-18 81.6
Msa0723130 MtrunA17_Chr4g0050911 37.398 123 66 3 88 200 12 133 4.55e-13 66.6
Msa0723130 MtrunA17_Chr1g0177231 28.235 85 61 0 259 343 34 118 1.39e-12 64.3
Msa0723130 MtrunA17_Chr1g0172891 26.596 94 69 0 253 346 6 99 1.89e-12 63.5
Msa0723130 MtrunA17_Chr1g0182261 32.258 124 81 3 207 327 89 212 1.99e-11 63.2
Msa0723130 MtrunA17_Chr8g0334731 33.333 111 72 1 92 200 77 187 8.25e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0723130 AT3G28050.1 45.427 328 168 4 10 333 14 334 9.28e-90 274
Msa0723130 AT5G40230.1 42.566 343 191 2 10 349 23 362 1.31e-89 273
Msa0723130 AT5G40240.1 41.003 339 186 3 12 343 24 355 2.24e-87 268
Msa0723130 AT5G40240.3 41.003 339 186 3 12 343 24 355 2.24e-87 268
Msa0723130 AT5G40240.2 41.003 339 186 3 12 343 38 369 5.88e-87 267
Msa0723130 AT5G40210.1 41.642 341 179 5 8 345 13 336 1.06e-77 242
Msa0723130 AT4G15540.1 42.647 340 182 2 10 349 19 345 4.85e-75 235
Msa0723130 AT4G15540.2 42.647 340 182 2 10 349 19 345 4.85e-75 235
Msa0723130 AT3G28080.1 41.787 347 189 6 10 349 16 356 1.48e-69 222
Msa0723130 AT3G28100.1 42.202 327 173 4 10 327 16 335 1.18e-68 219
Msa0723130 AT3G28070.1 40.688 349 189 5 10 349 19 358 2.76e-65 211
Msa0723130 AT3G28080.2 40.634 347 185 7 10 349 16 348 1.60e-62 203
Msa0723130 AT3G28130.2 38.218 348 206 5 6 349 11 353 6.21e-62 202
Msa0723130 AT3G28070.2 41.948 267 137 5 92 349 9 266 6.89e-60 194
Msa0723130 AT3G28080.5 42.642 265 139 6 92 349 9 267 2.21e-58 190
Msa0723130 AT3G28080.7 42.642 265 139 6 92 349 9 267 2.21e-58 190
Msa0723130 AT3G28080.8 42.642 265 139 6 92 349 9 267 2.21e-58 190
Msa0723130 AT3G28080.6 42.642 265 139 6 92 349 9 267 2.21e-58 190
Msa0723130 AT2G39510.1 34.242 330 206 5 11 334 11 335 1.78e-56 188
Msa0723130 AT1G21890.1 31.532 333 215 4 12 333 15 345 3.71e-55 185
Msa0723130 AT5G07050.1 33.945 327 206 5 12 329 22 347 8.81e-55 185
Msa0723130 AT3G28070.3 40.924 303 163 4 10 303 19 314 2.56e-53 178
Msa0723130 AT4G08300.1 34.091 308 198 4 31 334 34 340 2.62e-53 180
Msa0723130 AT3G28130.5 40.076 262 148 5 92 349 11 267 1.12e-52 175
Msa0723130 AT3G28130.1 40.076 262 148 5 92 349 11 267 1.12e-52 175
Msa0723130 AT3G18200.2 31.804 327 211 6 12 333 39 358 1.55e-51 176
Msa0723130 AT1G44800.1 31.447 318 212 4 31 345 34 348 2.07e-51 175
Msa0723130 AT3G28080.3 37.861 346 150 8 10 349 16 302 1.92e-48 165
Msa0723130 AT5G45370.1 30.514 331 218 4 10 339 22 341 8.08e-47 162
Msa0723130 AT1G70260.1 32.188 320 203 7 25 333 29 345 4.06e-46 161
Msa0723130 AT2G37460.1 29.971 347 216 6 11 344 18 350 7.12e-46 160
Msa0723130 AT1G09380.1 31.006 358 218 8 12 345 12 364 1.59e-45 160
Msa0723130 AT2G40900.1 30.699 329 218 5 12 336 15 337 3.85e-45 159
Msa0723130 AT5G45370.2 29.769 346 225 6 10 339 22 365 4.87e-45 159
Msa0723130 AT5G45370.4 29.769 346 225 6 10 339 22 365 4.87e-45 159
Msa0723130 AT4G28040.1 30.814 344 212 8 12 344 12 340 5.10e-45 158
Msa0723130 AT4G28040.5 30.814 344 212 8 12 344 12 340 5.10e-45 158
Msa0723130 AT4G28040.3 30.814 344 212 8 12 344 12 340 5.10e-45 158
Msa0723130 AT4G28040.4 30.814 344 212 8 12 344 12 340 5.10e-45 158
Msa0723130 AT4G28040.2 30.814 344 212 8 12 344 12 340 5.10e-45 158
Msa0723130 AT1G75500.1 27.989 368 234 6 12 350 24 389 7.52e-45 158
Msa0723130 AT1G75500.2 27.989 368 234 6 12 350 24 389 7.52e-45 158
Msa0723130 AT4G08290.1 28.863 343 237 5 12 349 17 357 1.07e-44 157
Msa0723130 AT3G28070.5 37.815 238 130 5 121 349 1 229 1.30e-44 153
Msa0723130 AT1G21890.2 31.373 306 197 4 12 306 15 318 2.11e-44 156
Msa0723130 AT3G28080.9 38.983 236 131 6 121 349 1 230 2.16e-43 150
Msa0723130 AT4G30420.1 28.972 321 216 6 21 333 11 327 1.68e-42 152
Msa0723130 AT3G53210.1 28.070 342 235 5 6 340 8 345 2.10e-42 151
Msa0723130 AT4G30420.2 28.972 321 216 6 21 333 21 337 2.20e-42 152
Msa0723130 AT3G56620.1 32.484 314 202 5 12 322 15 321 7.55e-42 150
Msa0723130 AT3G30340.1 30.097 309 203 4 25 326 28 330 7.93e-42 149
Msa0723130 AT5G13670.1 29.085 306 208 6 27 326 27 329 1.55e-41 149
Msa0723130 AT1G68170.1 29.191 346 233 3 10 346 5 347 7.99e-40 144
Msa0723130 AT4G01440.1 27.476 313 221 2 25 334 27 336 8.25e-40 144
Msa0723130 AT1G43650.1 29.874 318 218 3 12 328 11 324 8.62e-40 144
Msa0723130 AT5G64700.1 29.730 333 215 6 27 346 27 353 1.03e-39 144
Msa0723130 AT1G68170.2 29.191 346 233 3 10 346 15 357 1.23e-39 144
Msa0723130 AT3G28130.3 36.052 233 140 5 121 349 1 228 1.30e-38 137
Msa0723130 AT4G19185.1 26.741 359 243 3 10 349 23 380 1.88e-38 141
Msa0723130 AT3G28100.3 39.841 251 136 3 10 251 16 260 2.11e-38 138
Msa0723130 AT3G18200.1 31.739 230 151 3 106 333 3 228 2.79e-38 137
Msa0723130 AT3G45870.1 28.125 320 218 3 12 320 16 334 3.82e-37 137
Msa0723130 AT3G28080.4 37.500 264 100 8 92 349 9 213 4.31e-37 133
Msa0723130 AT1G25270.1 29.050 358 215 9 12 350 7 344 5.15e-36 134
Msa0723130 AT4G01440.3 28.421 285 198 2 25 306 27 308 1.54e-35 132
Msa0723130 AT2G37450.2 30.982 326 197 5 12 334 13 313 1.13e-34 130
Msa0723130 AT1G60050.1 27.907 344 228 7 25 349 30 372 1.84e-34 130
Msa0723130 AT3G53210.2 28.309 272 186 3 75 340 20 288 3.18e-34 128
Msa0723130 AT5G45370.6 29.658 263 169 4 92 339 2 263 2.65e-33 125
Msa0723130 AT5G45370.5 29.658 263 169 4 92 339 2 263 2.65e-33 125
Msa0723130 AT4G19185.2 27.799 259 171 2 84 327 19 276 3.24e-33 125
Msa0723130 AT3G28130.4 36.145 249 156 2 6 251 11 259 4.85e-33 124
Msa0723130 AT5G47470.1 26.979 341 231 6 12 344 34 364 5.45e-33 126
Msa0723130 AT4G01440.5 28.899 218 155 0 107 324 1 218 6.48e-33 123
Msa0723130 AT4G01440.2 28.899 218 155 0 107 324 1 218 6.48e-33 123
Msa0723130 AT5G47470.2 26.979 341 231 6 12 344 62 392 1.13e-32 125
Msa0723130 AT5G47470.3 26.498 317 224 4 12 325 62 372 7.26e-32 123
Msa0723130 AT4G08290.2 31.707 246 162 4 12 253 17 260 1.07e-31 120
Msa0723130 AT3G45870.8 27.213 305 210 3 12 305 16 319 1.36e-31 121
Msa0723130 AT2G37450.3 34.286 245 154 3 93 334 1 241 1.03e-30 117
Msa0723130 AT3G28100.2 43.564 202 100 2 10 203 16 211 1.45e-30 117
Msa0723130 AT1G01070.1 27.381 336 225 7 25 349 33 360 3.72e-30 118
Msa0723130 AT1G01070.2 28.626 262 182 4 92 349 53 313 1.13e-29 116
Msa0723130 AT1G11450.3 26.488 336 227 6 12 339 20 343 5.05e-29 115
Msa0723130 AT4G01430.1 25.301 332 240 6 25 350 26 355 1.12e-28 114
Msa0723130 AT3G28130.6 39.901 203 120 1 6 206 11 213 9.02e-28 108
Msa0723130 AT3G53210.3 28.235 255 174 4 6 255 8 258 1.74e-27 109
Msa0723130 AT1G11450.2 27.273 297 196 6 51 339 8 292 1.99e-27 109
Msa0723130 AT1G11450.1 27.711 249 174 3 92 339 8 251 2.05e-27 108
Msa0723130 AT1G11450.5 27.273 297 196 6 51 339 15 299 2.22e-27 109
Msa0723130 AT3G30340.2 30.672 238 152 4 25 255 28 259 3.26e-27 108
Msa0723130 AT4G01440.4 29.060 234 160 2 25 255 27 257 5.47e-26 105
Msa0723130 AT1G11460.1 25.466 322 225 4 12 325 20 334 1.98e-25 105
Msa0723130 AT4G01450.2 28.037 321 216 4 8 325 15 323 1.76e-24 102
Msa0723130 AT4G01450.1 27.425 299 202 4 8 303 15 301 7.68e-24 100
Msa0723130 AT5G45370.3 28.326 233 151 4 122 339 74 305 1.90e-23 99.4
Msa0723130 AT3G45870.5 27.523 218 146 3 114 320 43 259 8.57e-23 97.4
Msa0723130 AT3G45870.9 26.038 265 184 3 12 265 16 279 1.01e-22 96.7
Msa0723130 AT4G01450.4 28.462 260 168 5 8 261 15 262 3.23e-22 94.7
Msa0723130 AT1G11450.4 25.667 300 207 5 12 303 20 311 3.46e-22 95.9
Msa0723130 AT4G01430.2 25.965 285 203 6 25 303 26 308 4.39e-22 95.5
Msa0723130 AT1G43650.2 29.880 251 169 4 12 260 11 256 9.01e-22 93.6
Msa0723130 AT2G37450.1 33.333 156 103 1 180 334 119 274 1.27e-21 94.0
Msa0723130 AT5G64700.2 30.962 239 146 6 27 252 27 259 1.83e-21 92.8
Msa0723130 AT4G24980.1 25.166 302 156 10 27 326 6 239 5.22e-19 85.9
Msa0723130 AT4G01450.3 30.392 204 127 4 8 208 15 206 8.46e-19 85.1
Msa0723130 AT3G28060.1 37.288 118 60 3 193 303 44 154 5.44e-18 80.5
Msa0723130 AT4G16620.1 21.914 324 248 3 6 326 10 331 1.24e-17 83.6
Msa0723130 AT4G01430.3 23.744 219 162 3 136 350 1 218 2.66e-17 80.5
Msa0723130 AT3G45870.6 26.368 201 136 3 114 303 43 242 3.85e-17 80.5
Msa0723130 AT3G45870.7 26.368 201 136 3 114 303 43 242 3.85e-17 80.5
Msa0723130 AT3G45870.2 27.517 149 107 1 172 320 36 183 2.45e-15 75.1
Msa0723130 AT4G16620.4 23.305 236 177 2 93 326 1 234 2.39e-14 72.8
Msa0723130 AT4G16620.2 23.305 236 177 2 93 326 1 234 2.39e-14 72.8

Find 58 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAAATTGATGTTGAAAT+TGG 0.196689 5_1:-20754706 None:intergenic
GGGAAATCAGATTGGATAAT+TGG 0.197562 5_1:+20758301 Msa0723130:CDS
TTCTATAGATTACTTCTTCT+TGG 0.212688 5_1:+20754724 Msa0723130:CDS
TCCAATCTGATTTCCCTAAA+AGG 0.218236 5_1:-20758294 None:intergenic
AGTGCAATGACCACTCTTAA+AGG 0.236929 5_1:-20759222 None:intergenic
GGAGCTGCTATCATAGTTAT+TGG 0.246971 5_1:+20759411 Msa0723130:CDS
GTGTTTATCACTAGCTCTTC+TGG 0.247926 5_1:-20758767 None:intergenic
ACTCATATGTTAATGACTTC+TGG 0.288657 5_1:+20754917 Msa0723130:CDS
GGCACAGTGGTCTCTATTGC+AGG 0.308068 5_1:+20758187 Msa0723130:CDS
AGCAGCCAGGCAAAAGTTAT+TGG 0.314638 5_1:+20758166 Msa0723130:CDS
TTCTCTTCTGTTTATTGTCC+AGG 0.332403 5_1:+20758357 Msa0723130:CDS
TTGAACATAGCTACATATAT+TGG 0.334507 5_1:-20759198 None:intergenic
ACTTATTGGTGCAGCTTGAT+TGG 0.350269 5_1:+20759390 Msa0723130:intron
TGCATCTATGATCATTCTAA+TGG 0.356156 5_1:-20759722 None:intergenic
GAAGAAAACATAGAGCTAAA+AGG 0.380922 5_1:-20754642 None:intergenic
AAACAAAAGCATGGATATAT+AGG 0.382758 5_1:+20759524 Msa0723130:CDS
TCATACTTGCTATAATTTCA+AGG 0.384041 5_1:+20755002 Msa0723130:CDS
TTGGGAGACAATCTTTATCT+TGG 0.387204 5_1:+20759264 Msa0723130:CDS
ACAGATAGCAACTGTTTATC+AGG 0.412768 5_1:-20758872 None:intergenic
ATATACAGACTTGGATTGTC+AGG 0.424821 5_1:+20758738 Msa0723130:intron
ATGAAATCAGCCACAAAAGA+TGG 0.452927 5_1:+20754586 Msa0723130:CDS
CAGAGGGAAATTCAAATGCT+TGG 0.454003 5_1:+20758840 Msa0723130:CDS
AAAATTGATGTTGAAATTGG+AGG 0.473060 5_1:-20754703 None:intergenic
TTATTGGCATCATTAATCAA+TGG 0.483388 5_1:-20758241 None:intergenic
TACCACAAAACAGCAACAAA+TGG 0.500109 5_1:-20758789 None:intergenic
GCAAGTATGAAGGTGAAAGC+AGG 0.505783 5_1:-20754989 None:intergenic
CTATGGTGGAAGAGAGTGGA+TGG 0.506366 5_1:-20754667 None:intergenic
AGTGGTCATTGCACTTAGCA+TGG 0.527230 5_1:+20759230 Msa0723130:CDS
TGAAATTATAGCAAGTATGA+AGG 0.531313 5_1:-20754999 None:intergenic
AATATAGAAATGGGAGCAAG+TGG 0.531385 5_1:+20758265 Msa0723130:CDS
GAGACAATCTTTATCTTGGA+AGG 0.532255 5_1:+20759268 Msa0723130:CDS
ATTGATGTTGAAATTGGAGG+AGG 0.546987 5_1:-20754700 None:intergenic
GTGGTCATTGCACTTAGCAT+GGG 0.547313 5_1:+20759231 Msa0723130:CDS
CTCTGCAATGAGAGCTACAA+TGG 0.554415 5_1:-20758822 None:intergenic
GCACAGTGGTCTCTATTGCA+GGG 0.571242 5_1:+20758188 Msa0723130:CDS
ACATGGGCATGTCATAAGAA+AGG 0.572940 5_1:+20759174 Msa0723130:CDS
CACAGTGGTCTCTATTGCAG+GGG 0.584216 5_1:+20758189 Msa0723130:CDS
TGCAGCTCAAATTGTTGAAG+TGG 0.587755 5_1:+20754549 Msa0723130:CDS
TATACAGACTTGGATTGTCA+GGG 0.590593 5_1:+20758739 Msa0723130:intron
TGGTCATTGCACTTAGCATG+GGG 0.592040 5_1:+20759232 Msa0723130:CDS
TATGTTCAAACCTTTAAGAG+TGG 0.597273 5_1:+20759212 Msa0723130:CDS
TCTGTTGTCAAACAAAAGCA+TGG 0.602843 5_1:+20759515 Msa0723130:CDS
CAAAAGCATGGATATATAGG+AGG 0.604044 5_1:+20759527 Msa0723130:exon
ATTGTAGCTCTCATTGCAGA+GGG 0.608307 5_1:+20758824 Msa0723130:CDS
GATATGGGCACAAGCTCAAG+AGG 0.617122 5_1:+20759446 Msa0723130:CDS
TAAATTCAGTTCTCCCACGT+TGG 0.619926 5_1:+20754943 Msa0723130:CDS
CAAGTATGAAGGTGAAAGCA+GGG 0.622957 5_1:-20754988 None:intergenic
TGAAGAATGTTATACACACA+TGG 0.625464 5_1:+20759157 Msa0723130:CDS
GCAGCTCAAATTGTTGAAGT+GGG 0.628887 5_1:+20754550 Msa0723130:CDS
AGCATGGATATATAGGAGGA+CGG 0.632275 5_1:+20759531 Msa0723130:exon
CATTGTAGCTCTCATTGCAG+AGG 0.632723 5_1:+20758823 Msa0723130:CDS
AACAATAGCTGAAGCCAACG+TGG 0.634527 5_1:-20754957 None:intergenic
GAAGAATGTTATACACACAT+GGG 0.649829 5_1:+20759158 Msa0723130:CDS
GTGGTAGGTTATATTAAACA+TGG 0.651059 5_1:+20759572 Msa0723130:three_prime_UTR
GGTCATTGCACTTAGCATGG+GGG 0.701257 5_1:+20759233 Msa0723130:CDS
ACAATAGCTGAAGCCAACGT+GGG 0.701649 5_1:-20754956 None:intergenic
GGCAAAAGTTATTGGCACAG+TGG 0.705210 5_1:+20758174 Msa0723130:CDS
GCTCAAATTGTTGAAGTGGG+TGG 0.711164 5_1:+20754553 Msa0723130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATTATTATTATA+AGG + chr5_1:20754841-20754860 Msa0723130:intron 0.0%
!!! TTTTTTTTTTAATTAAAAAA+TGG + chr5_1:20759363-20759382 Msa0723130:intron 0.0%
!!! TATTTTTTTAAATAATAGAG+TGG + chr5_1:20755662-20755681 Msa0723130:intron 10.0%
!! AATAAAAAATTAACATAATG+AGG - chr5_1:20757632-20757651 None:intergenic 10.0%
!! AAAAAGAAATTGTATATTAA+TGG + chr5_1:20759671-20759690 Msa0723130:three_prime_UTR 10.0%
!! TTATTATAAGGATTTGAATT+TGG + chr5_1:20754853-20754872 Msa0723130:intron 15.0%
!!! TGACTGAATTATTATTATTT+TGG + chr5_1:20755262-20755281 Msa0723130:intron 15.0%
!!! TGAATTATTATTATTTTGGT+GGG + chr5_1:20755266-20755285 Msa0723130:intron 15.0%
!! ATTCCAATTAATCAAATTTA+AGG + chr5_1:20755289-20755308 Msa0723130:intron 15.0%
!!! AAAAGTTATTGTAGTTTTTA+AGG + chr5_1:20755315-20755334 Msa0723130:intron 15.0%
!!! TTGTTTCTTGATAATTTTAT+TGG + chr5_1:20755445-20755464 Msa0723130:intron 15.0%
!! ATCATATGTTTCATATAATA+GGG + chr5_1:20755590-20755609 Msa0723130:intron 15.0%
!! TAATATGATCTATTTATAGT+GGG - chr5_1:20755644-20755663 None:intergenic 15.0%
!! ATAATATGATCTATTTATAG+TGG - chr5_1:20755645-20755664 None:intergenic 15.0%
!! TAAGGCATATTTAATTAAAT+AGG + chr5_1:20756267-20756286 Msa0723130:intron 15.0%
!! TTATATATGAAAAGCTTAAT+AGG - chr5_1:20756338-20756357 None:intergenic 15.0%
!! AACTTCAAAAATATCAATAA+TGG - chr5_1:20756369-20756388 None:intergenic 15.0%
!!! CATAAAATAGGTTTTTAAAT+AGG + chr5_1:20756724-20756743 Msa0723130:intron 15.0%
!! AATATCATCTATAATTGAAT+CGG - chr5_1:20757337-20757356 None:intergenic 15.0%
!! ATATGTAATTGTAGTATTAA+AGG - chr5_1:20757955-20757974 None:intergenic 15.0%
!!! ATTATTTTTCACAAATTTGT+TGG - chr5_1:20759306-20759325 None:intergenic 15.0%
!!! TAAAAAATGGTTTAACTTAT+TGG + chr5_1:20759376-20759395 Msa0723130:intron 15.0%
!! TAGAAAATTGATGTTGAAAT+TGG - chr5_1:20754709-20754728 None:intergenic 20.0%
!! ATAATTTCAAGGTATGTTTA+TGG + chr5_1:20755013-20755032 Msa0723130:intron 20.0%
!!! CTGAATTATTATTATTTTGG+TGG + chr5_1:20755265-20755284 Msa0723130:intron 20.0%
!! TCTCCTTAAATTTGATTAAT+TGG - chr5_1:20755295-20755314 None:intergenic 20.0%
!!! TTGATAATTTTATTGGTTGT+GGG + chr5_1:20755452-20755471 Msa0723130:intron 20.0%
!!! CATACATCTCTTTTTTAATT+CGG + chr5_1:20755476-20755495 Msa0723130:intron 20.0%
!! TTTATAATATCTGACATGAT+AGG + chr5_1:20755546-20755565 Msa0723130:intron 20.0%
!! GATCATATGTTTCATATAAT+AGG + chr5_1:20755589-20755608 Msa0723130:intron 20.0%
!! TAAATAATGAATTCTTACGA+AGG - chr5_1:20756459-20756478 None:intergenic 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr5_1:20756562-20756581 Msa0723130:intron 20.0%
!!! TAAAAACCTATTTTATGCTA+AGG - chr5_1:20756721-20756740 None:intergenic 20.0%
!! AATAAACTTATATAAGTCTG+AGG + chr5_1:20757042-20757061 Msa0723130:intron 20.0%
!! ATCCTTGATAAAAGAAAAAA+CGG - chr5_1:20757194-20757213 None:intergenic 20.0%
!! TAAATACTCAGTATATATGA+AGG - chr5_1:20757307-20757326 None:intergenic 20.0%
!!! ATTTGGCTATTTTTTTGTTT+TGG - chr5_1:20757568-20757587 None:intergenic 20.0%
!!! TTAGTCTTAGTTTAGTTATT+TGG - chr5_1:20757585-20757604 None:intergenic 20.0%
!! ACAAAGAACTAAAAATTGTA+AGG + chr5_1:20757713-20757732 Msa0723130:intron 20.0%
!!! ACAAGGTTTAATAACATTTT+TGG - chr5_1:20757795-20757814 None:intergenic 20.0%
!!! AACCTTGTTTTTTAAAAACA+AGG + chr5_1:20757807-20757826 Msa0723130:intron 20.0%
!!! ACCTTGTTTTTTAAAAACAA+GGG + chr5_1:20757808-20757827 Msa0723130:intron 20.0%
!! TTAAAAACAAGGGTTTAAAA+AGG + chr5_1:20757818-20757837 Msa0723130:intron 20.0%
!!! TAGTAATGAAATTTTGAAAG+TGG - chr5_1:20758047-20758066 None:intergenic 20.0%
!!! TATTTTTTCTTGTATTTGCA+AGG - chr5_1:20758085-20758104 None:intergenic 20.0%
!!! TTAGTTGTGACATTTTATAA+AGG + chr5_1:20758214-20758233 Msa0723130:CDS 20.0%
!!! TAGTTGTGACATTTTATAAA+GGG + chr5_1:20758215-20758234 Msa0723130:CDS 20.0%
!! TGCCAATAAAAATATAGAAA+TGG + chr5_1:20758255-20758274 Msa0723130:CDS 20.0%
!! GCCAATAAAAATATAGAAAT+GGG + chr5_1:20758256-20758275 Msa0723130:CDS 20.0%
!!! TCCCATTTCTATATTTTTAT+TGG - chr5_1:20758260-20758279 None:intergenic 20.0%
!!! TAATATATAGTTTGTTTACC+TGG - chr5_1:20758378-20758397 None:intergenic 20.0%
!! ACATCAAAAACCTTTATATT+CGG - chr5_1:20758559-20758578 None:intergenic 20.0%
!!! AATTGTAGCTGTTTAAATTT+TGG + chr5_1:20759069-20759088 Msa0723130:intron 20.0%
!!! CTTTTTTTAGAAGAACAAAA+AGG - chr5_1:20759813-20759832 None:intergenic 20.0%
!!! CTTTTTGTTCTTCTAAAAAA+AGG + chr5_1:20759811-20759830 Msa0723130:three_prime_UTR 20.0%
! AAAATTGATGTTGAAATTGG+AGG - chr5_1:20754706-20754725 None:intergenic 25.0%
! TTCTATAGATTACTTCTTCT+TGG + chr5_1:20754724-20754743 Msa0723130:CDS 25.0%
!! TACTATTTTGTTCATACTTG+AGG - chr5_1:20754753-20754772 None:intergenic 25.0%
! TGAAATTATAGCAAGTATGA+AGG - chr5_1:20755002-20755021 None:intergenic 25.0%
!!! TCATACTTGCTATAATTTCA+AGG + chr5_1:20755002-20755021 Msa0723130:CDS 25.0%
! TGTTTATGGTTGAAATTACA+AGG + chr5_1:20755027-20755046 Msa0723130:intron 25.0%
!!! TTACAAGGTTTGTTGTTTTT+TGG + chr5_1:20755042-20755061 Msa0723130:intron 25.0%
! ACTATATCTCTTTCATAGAT+AGG + chr5_1:20755362-20755381 Msa0723130:intron 25.0%
!!! CTTGATAATTTTATTGGTTG+TGG + chr5_1:20755451-20755470 Msa0723130:intron 25.0%
! TTTCAAGATTGATATTAGCA+AGG + chr5_1:20755869-20755888 Msa0723130:intron 25.0%
! ATGAATAAATATGGGGATAA+CGG - chr5_1:20756068-20756087 None:intergenic 25.0%
! ATCCCCATATTTATTCATAT+TGG + chr5_1:20756070-20756089 Msa0723130:intron 25.0%
! CACCAATATGAATAAATATG+GGG - chr5_1:20756075-20756094 None:intergenic 25.0%
! CCACCAATATGAATAAATAT+GGG - chr5_1:20756076-20756095 None:intergenic 25.0%
! ACCACCAATATGAATAAATA+TGG - chr5_1:20756077-20756096 None:intergenic 25.0%
! CATATTTAATTAAATAGGCC+AGG + chr5_1:20756272-20756291 Msa0723130:intron 25.0%
! CTAAATAACCAATCATATGA+AGG - chr5_1:20756411-20756430 None:intergenic 25.0%
!! CATATGATTGGTTATTTAGT+AGG + chr5_1:20756412-20756431 Msa0723130:intron 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr5_1:20756509-20756528 None:intergenic 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr5_1:20756509-20756528 Msa0723130:intron 25.0%
! ATATAAACCTACTCCTAAAT+AGG - chr5_1:20756525-20756544 None:intergenic 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr5_1:20756559-20756578 None:intergenic 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr5_1:20756509-20756528 None:intergenic 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr5_1:20756509-20756528 Msa0723130:intron 25.0%
! ATATAAACCTACTCCTAAAT+AGG - chr5_1:20756525-20756544 None:intergenic 25.0%
!! CACTATTCTTAAAACTTTTG+AGG + chr5_1:20757003-20757022 Msa0723130:intron 25.0%
!!! AGTTCAATTTAGTTCTGATT+TGG - chr5_1:20757532-20757551 None:intergenic 25.0%
!!! ACCCTTGTTTTTAAAAAACA+AGG - chr5_1:20757812-20757831 None:intergenic 25.0%
!!! GATATTTTTGAAAATCACCT+TGG - chr5_1:20757902-20757921 None:intergenic 25.0%
!! TGATAAAGCTTGAATACTTT+TGG + chr5_1:20757927-20757946 Msa0723130:intron 25.0%
!! GATAAAGCTTGAATACTTTT+GGG + chr5_1:20757928-20757947 Msa0723130:intron 25.0%
! TTATTGGCATCATTAATCAA+TGG - chr5_1:20758244-20758263 None:intergenic 25.0%
! ACATGCTTTATCATATCAAT+AGG + chr5_1:20758685-20758704 Msa0723130:intron 25.0%
! CATGCTTTATCATATCAATA+GGG + chr5_1:20758686-20758705 Msa0723130:intron 25.0%
! ATGCTTTATCATATCAATAG+GGG + chr5_1:20758687-20758706 Msa0723130:intron 25.0%
!!! CTGTTTAAATTTTGGTTTTG+TGG + chr5_1:20759077-20759096 Msa0723130:intron 25.0%
! TGTGGATATTCATTTAATCA+TGG + chr5_1:20759095-20759114 Msa0723130:intron 25.0%
! TTGAACATAGCTACATATAT+TGG - chr5_1:20759201-20759220 None:intergenic 25.0%
! AATGATGATTAATCCAAGAT+TGG + chr5_1:20759329-20759348 Msa0723130:intron 25.0%
! AAAAAAAAACTAGCCAATCT+TGG - chr5_1:20759345-20759364 None:intergenic 25.0%
!! AAACAAAAGCATGGATATAT+AGG + chr5_1:20759524-20759543 Msa0723130:CDS 25.0%
!! TTTGTTCTTCTAAAAAAAGG+AGG + chr5_1:20759814-20759833 Msa0723130:three_prime_UTR 25.0%
GAAGAAAACATAGAGCTAAA+AGG - chr5_1:20754645-20754664 None:intergenic 30.0%
TTTGGCAAAATAGAGTGATA+TGG + chr5_1:20754871-20754890 Msa0723130:intron 30.0%
ACTCATATGTTAATGACTTC+TGG + chr5_1:20754917-20754936 Msa0723130:CDS 30.0%
TAGAAGTCAACTAACTAAGA+TGG - chr5_1:20755517-20755536 None:intergenic 30.0%
TTTGGTTAAATGTGTGTTAG+AGG + chr5_1:20755737-20755756 Msa0723130:intron 30.0%
!!! GCTTTTGATATAGTGGATTT+GGG + chr5_1:20755891-20755910 Msa0723130:intron 30.0%
!!! CTTTTGATATAGTGGATTTG+GGG + chr5_1:20755892-20755911 Msa0723130:intron 30.0%
!! TGTTAGTTCTGCTACTTATT+CGG + chr5_1:20755980-20755999 Msa0723130:intron 30.0%
TGAATAAATATGGGGATAAC+GGG - chr5_1:20756067-20756086 None:intergenic 30.0%
CCCATATTTATTCATATTGG+TGG + chr5_1:20756073-20756092 Msa0723130:intron 30.0%
! TTTATTCATATTGGTGGTTG+AGG + chr5_1:20756079-20756098 Msa0723130:intron 30.0%
! TTATTCATATTGGTGGTTGA+GGG + chr5_1:20756080-20756099 Msa0723130:intron 30.0%
TTGATAGAGGTGATATTCAT+GGG + chr5_1:20756129-20756148 Msa0723130:intron 30.0%
ATATGAAAAGCTTAATAGGC+CGG - chr5_1:20756334-20756353 None:intergenic 30.0%
CAAACATATTTGTGTGCTTT+AGG + chr5_1:20756483-20756502 Msa0723130:intron 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG + chr5_1:20756499-20756518 Msa0723130:intron 30.0%
CAAACATATTTGTGTGCTTT+AGG + chr5_1:20756483-20756502 Msa0723130:intron 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG + chr5_1:20756499-20756518 Msa0723130:intron 30.0%
! AGGTTTTTAAATAGGCTTTC+AGG + chr5_1:20756732-20756751 Msa0723130:intron 30.0%
TTTGTTTGCAAACAACAGAT+GGG - chr5_1:20756936-20756955 None:intergenic 30.0%
ATTTGTTTGCAAACAACAGA+TGG - chr5_1:20756937-20756956 None:intergenic 30.0%
!!! CAAATGTTTCTTGTTTTGCA+TGG + chr5_1:20756952-20756971 Msa0723130:intron 30.0%
!! TTTTTCAGTCGTAATATGAG+TGG + chr5_1:20757067-20757086 Msa0723130:intron 30.0%
! TTTTCAGTCGTAATATGAGT+GGG + chr5_1:20757068-20757087 Msa0723130:intron 30.0%
TTATCTCTACCAATCATTGA+AGG - chr5_1:20757166-20757185 None:intergenic 30.0%
!!! GTCCGTTTTTTCTTTTATCA+AGG + chr5_1:20757189-20757208 Msa0723130:intron 30.0%
! CTTTTATCAAGGATTGTATC+TGG + chr5_1:20757200-20757219 Msa0723130:intron 30.0%
! AGAAGATGATCAATGTGTTT+TGG + chr5_1:20757358-20757377 Msa0723130:intron 30.0%
ATAAAATGCCCCAAAGAATT+TGG + chr5_1:20757408-20757427 Msa0723130:intron 30.0%
!! TAGTTCTGATTTGGATATGT+GGG - chr5_1:20757523-20757542 None:intergenic 30.0%
!! TTAGTTCTGATTTGGATATG+TGG - chr5_1:20757524-20757543 None:intergenic 30.0%
AAGACTAACGATAAATCAGA+AGG + chr5_1:20757597-20757616 Msa0723130:intron 30.0%
ATCAATTGTAACATCCAAGA+AGG + chr5_1:20757860-20757879 Msa0723130:intron 30.0%
! CAAGTGGAATTTTCCTTTTA+GGG + chr5_1:20758281-20758300 Msa0723130:CDS 30.0%
! CACAACGTGTAATTTAGAAT+CGG + chr5_1:20758660-20758679 Msa0723130:intron 30.0%
CAAGTCTGTATATACATAGA+TGG - chr5_1:20758731-20758750 None:intergenic 30.0%
CATCTATGTATATACAGACT+TGG + chr5_1:20758729-20758748 Msa0723130:intron 30.0%
AGCTGCCTATAAATGATTAA+AGG - chr5_1:20759124-20759143 None:intergenic 30.0%
TGAAGAATGTTATACACACA+TGG + chr5_1:20759157-20759176 Msa0723130:CDS 30.0%
GAAGAATGTTATACACACAT+GGG + chr5_1:20759158-20759177 Msa0723130:CDS 30.0%
! TATGTTCAAACCTTTAAGAG+TGG + chr5_1:20759212-20759231 Msa0723130:CDS 30.0%
! TTGGATTTTATGCTGTGATA+TGG + chr5_1:20759430-20759449 Msa0723130:CDS 30.0%
! TGGATTTTATGCTGTGATAT+GGG + chr5_1:20759431-20759450 Msa0723130:CDS 30.0%
GTGGTAGGTTATATTAAACA+TGG + chr5_1:20759572-20759591 Msa0723130:three_prime_UTR 30.0%
TGCATCTATGATCATTCTAA+TGG - chr5_1:20759725-20759744 None:intergenic 30.0%
ATGAAATCAGCCACAAAAGA+TGG + chr5_1:20754586-20754605 Msa0723130:CDS 35.0%
! AACACTCATTCCATCTTTTG+TGG - chr5_1:20754599-20754618 None:intergenic 35.0%
ATTGATGTTGAAATTGGAGG+AGG - chr5_1:20754703-20754722 None:intergenic 35.0%
! CTTAGTTAGTTGACTTCTAC+TGG + chr5_1:20755518-20755537 Msa0723130:intron 35.0%
AGTGGATCATATGTGTAAGA+TGG + chr5_1:20755680-20755699 Msa0723130:intron 35.0%
! TAGCAAGGCTTTTGATATAG+TGG + chr5_1:20755884-20755903 Msa0723130:intron 35.0%
!!! GGCTTTTGATATAGTGGATT+TGG + chr5_1:20755890-20755909 Msa0723130:intron 35.0%
GGTGCTTATGAACTTTGATA+AGG + chr5_1:20756001-20756020 Msa0723130:intron 35.0%
GCTTATGAACTTTGATAAGG+TGG + chr5_1:20756004-20756023 Msa0723130:intron 35.0%
! GTTGATAGAGGTGATATTCA+TGG + chr5_1:20756128-20756147 Msa0723130:intron 35.0%
TGATAGAGGTGATATTCATG+GGG + chr5_1:20756130-20756149 Msa0723130:intron 35.0%
ATATTCATGGGGTACAAGTA+GGG + chr5_1:20756141-20756160 Msa0723130:intron 35.0%
! GTCTTGTTAATAAACGAGCT+GGG - chr5_1:20756230-20756249 None:intergenic 35.0%
CCTTATAAAAAGCTTGAGTC+TGG - chr5_1:20756252-20756271 None:intergenic 35.0%
! CCAGACTCAAGCTTTTTATA+AGG + chr5_1:20756249-20756268 Msa0723130:intron 35.0%
TAATTAAATAGGCCAGGCTA+AGG + chr5_1:20756278-20756297 Msa0723130:intron 35.0%
AAAAAGCCTATTAAGCCCAT+CGG + chr5_1:20756307-20756326 Msa0723130:intron 35.0%
CATATGAAGGCTTGTGTTTA+TGG - chr5_1:20756398-20756417 None:intergenic 35.0%
AACACAAGCCTTCATATGAT+TGG + chr5_1:20756400-20756419 Msa0723130:intron 35.0%
TCCAGACCTTAGCATAAAAT+AGG + chr5_1:20756550-20756569 Msa0723130:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + chr5_1:20756570-20756589 Msa0723130:intron 35.0%
! TACTGACCTGACCTTTTTAA+AGG - chr5_1:20756606-20756625 None:intergenic 35.0%
TCCAGACCTTAGCATAAAAT+AGG + chr5_1:20756550-20756569 Msa0723130:intron 35.0%
! ACCTATTTTATGCTAAGGTC+TGG - chr5_1:20756716-20756735 None:intergenic 35.0%
TTTCAGTCGTAATATGAGTG+GGG + chr5_1:20757069-20757088 Msa0723130:intron 35.0%
!! ATGGGTACTGGAAAGTATTT+GGG + chr5_1:20757136-20757155 Msa0723130:intron 35.0%
TTGGGATTACCTTCAATGAT+TGG + chr5_1:20757154-20757173 Msa0723130:intron 35.0%
CAATGATTGGTAGAGATAAG+AGG + chr5_1:20757167-20757186 Msa0723130:intron 35.0%
!! AGATGATCAATGTGTTTTGG+TGG + chr5_1:20757361-20757380 Msa0723130:intron 35.0%
!!! GATGATCAATGTGTTTTGGT+GGG + chr5_1:20757362-20757381 Msa0723130:intron 35.0%
!!! ATGATCAATGTGTTTTGGTG+GGG + chr5_1:20757363-20757382 Msa0723130:intron 35.0%
!! AGTTCTGATTTGGATATGTG+GGG - chr5_1:20757522-20757541 None:intergenic 35.0%
TCTAGTATCAAACACCTTCT+TGG - chr5_1:20757877-20757896 None:intergenic 35.0%
! GAAAGTGGACATTTTGTTAC+CGG - chr5_1:20758032-20758051 None:intergenic 35.0%
! ATACTGTGATGTGCATTTTC+AGG + chr5_1:20758116-20758135 Msa0723130:intron 35.0%
AATATAGAAATGGGAGCAAG+TGG + chr5_1:20758265-20758284 Msa0723130:CDS 35.0%
! GCAAGTGGAATTTTCCTTTT+AGG + chr5_1:20758280-20758299 Msa0723130:CDS 35.0%
!! TCCTTTTAGGGAAATCAGAT+TGG + chr5_1:20758293-20758312 Msa0723130:CDS 35.0%
TCCAATCTGATTTCCCTAAA+AGG - chr5_1:20758297-20758316 None:intergenic 35.0%
GGGAAATCAGATTGGATAAT+TGG + chr5_1:20758301-20758320 Msa0723130:CDS 35.0%
TTCTCTTCTGTTTATTGTCC+AGG + chr5_1:20758357-20758376 Msa0723130:CDS 35.0%
AAGAGAACCACAAGTAAATG+TGG + chr5_1:20758445-20758464 Msa0723130:intron 35.0%
GACCATAATTAAATCCGCAT+CGG - chr5_1:20758471-20758490 None:intergenic 35.0%
CAAAATCGTAGTTGCAATTG+CGG + chr5_1:20758533-20758552 Msa0723130:intron 35.0%
TATCACAATAGCTGTTGCAT+TGG + chr5_1:20758590-20758609 Msa0723130:intron 35.0%
TGAATGTTGCCACAATACAA+TGG + chr5_1:20758624-20758643 Msa0723130:intron 35.0%
ATATACAGACTTGGATTGTC+AGG + chr5_1:20758738-20758757 Msa0723130:intron 35.0%
TATACAGACTTGGATTGTCA+GGG + chr5_1:20758739-20758758 Msa0723130:intron 35.0%
TACCACAAAACAGCAACAAA+TGG - chr5_1:20758792-20758811 None:intergenic 35.0%
ACAGATAGCAACTGTTTATC+AGG - chr5_1:20758875-20758894 None:intergenic 35.0%
GGCTGCCTTTAATCATTTAT+AGG + chr5_1:20759116-20759135 Msa0723130:intron 35.0%
! TCATTTATAGGCAGCTTTTG+TGG + chr5_1:20759128-20759147 Msa0723130:intron 35.0%
! TAGCATGGGGGTTATATTTT+TGG + chr5_1:20759245-20759264 Msa0723130:CDS 35.0%
! AGCATGGGGGTTATATTTTT+GGG + chr5_1:20759246-20759265 Msa0723130:CDS 35.0%
TTGGGAGACAATCTTTATCT+TGG + chr5_1:20759264-20759283 Msa0723130:CDS 35.0%
GAGACAATCTTTATCTTGGA+AGG + chr5_1:20759268-20759287 Msa0723130:CDS 35.0%
!! TGCTTTTGTTTGACAACAGA+GGG - chr5_1:20759515-20759534 None:intergenic 35.0%
!! ATGCTTTTGTTTGACAACAG+AGG - chr5_1:20759516-20759535 None:intergenic 35.0%
TCTGTTGTCAAACAAAAGCA+TGG + chr5_1:20759515-20759534 Msa0723130:CDS 35.0%
! CAAAAGCATGGATATATAGG+AGG + chr5_1:20759527-20759546 Msa0723130:exon 35.0%
!!! ACGGAGACTATGCTTTTTTA+AGG + chr5_1:20759550-20759569 Msa0723130:three_prime_UTR 35.0%
!!! GAGACTATGCTTTTTTAAGG+TGG + chr5_1:20759553-20759572 Msa0723130:three_prime_UTR 35.0%
!!! CTATGCTTTTTTAAGGTGGT+AGG + chr5_1:20759557-20759576 Msa0723130:three_prime_UTR 35.0%
AGACAAGAAAAAATGGCGAG+TGG + chr5_1:20754499-20754518 Msa0723130:exon 40.0%
TGCAGCTCAAATTGTTGAAG+TGG + chr5_1:20754549-20754568 Msa0723130:CDS 40.0%
GCAGCTCAAATTGTTGAAGT+GGG + chr5_1:20754550-20754569 Msa0723130:CDS 40.0%
!! TTTTCTATGGTGGAAGAGAG+TGG - chr5_1:20754674-20754693 None:intergenic 40.0%
TAAATTCAGTTCTCCCACGT+TGG + chr5_1:20754943-20754962 Msa0723130:CDS 40.0%
CAAGTATGAAGGTGAAAGCA+GGG - chr5_1:20754991-20755010 None:intergenic 40.0%
TCATAGATAGGATACGTTCC+CGG + chr5_1:20755374-20755393 Msa0723130:intron 40.0%
AGAAAAGACAAGCTTCCTAC+CGG - chr5_1:20755396-20755415 None:intergenic 40.0%
TAATCGACTGAAACGGTGTT+TGG + chr5_1:20755719-20755738 Msa0723130:intron 40.0%
TAACACACATCATCATCCAC+TGG - chr5_1:20755965-20755984 None:intergenic 40.0%
GATATTCATGGGGTACAAGT+AGG + chr5_1:20756140-20756159 Msa0723130:intron 40.0%
TATTCATGGGGTACAAGTAG+GGG + chr5_1:20756142-20756161 Msa0723130:intron 40.0%
!! GGTCTTGTTAATAAACGAGC+TGG - chr5_1:20756231-20756250 None:intergenic 40.0%
!!! CTTTTTTGAAAGCCTTAGCC+TGG - chr5_1:20756293-20756312 None:intergenic 40.0%
AAAAGCCTATTAAGCCCATC+GGG + chr5_1:20756308-20756327 Msa0723130:intron 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG + chr5_1:20756515-20756534 Msa0723130:intron 40.0%
! GCCTATTTTATGCTAAGGTC+TGG - chr5_1:20756554-20756573 None:intergenic 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG + chr5_1:20756592-20756611 Msa0723130:intron 40.0%
! ATCAGGCCTTTAAAAAGGTC+AGG + chr5_1:20756597-20756616 Msa0723130:intron 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG + chr5_1:20756515-20756534 Msa0723130:intron 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG + chr5_1:20756592-20756611 Msa0723130:intron 40.0%
! ATCAGGCCTTTAAAAAGGTC+AGG + chr5_1:20756597-20756616 Msa0723130:intron 40.0%
!!! AGGCCTAGCATTTTTGAAGT+AGG + chr5_1:20756826-20756845 Msa0723130:intron 40.0%
TGGCCTACTTCAAAAATGCT+AGG - chr5_1:20756832-20756851 None:intergenic 40.0%
!!! TAGCATTTTTGAAGTAGGCC+AGG + chr5_1:20756831-20756850 Msa0723130:intron 40.0%
TTGTACCTAGAGGTGGAAAT+GGG - chr5_1:20756888-20756907 None:intergenic 40.0%
AACTTACTTGTACCTAGAGG+TGG - chr5_1:20756895-20756914 None:intergenic 40.0%
CTCTAGGTACAAGTAAGTTG+CGG + chr5_1:20756896-20756915 Msa0723130:intron 40.0%
!!! AAAACTTTTGAGGCAGCATC+TGG + chr5_1:20757013-20757032 Msa0723130:intron 40.0%
GAGGATTTGTCACGCATTAT+TGG + chr5_1:20757100-20757119 Msa0723130:intron 40.0%
! TATTGGTGTCCAACATGTGA+TGG + chr5_1:20757117-20757136 Msa0723130:intron 40.0%
! ATTGGTGTCCAACATGTGAT+GGG + chr5_1:20757118-20757137 Msa0723130:intron 40.0%
!! GATGGGTACTGGAAAGTATT+TGG + chr5_1:20757135-20757154 Msa0723130:intron 40.0%
TCTGGAAACGAATAAATGCG+TGG + chr5_1:20757218-20757237 Msa0723130:intron 40.0%
GAAACGAATAAATGCGTGGA+GGG + chr5_1:20757222-20757241 Msa0723130:intron 40.0%
AAACGAATAAATGCGTGGAG+GGG + chr5_1:20757223-20757242 Msa0723130:intron 40.0%
AAATGCCCCAAAGAATTTGG+TGG + chr5_1:20757411-20757430 Msa0723130:intron 40.0%
CCATTCCACCAAATTCTTTG+GGG - chr5_1:20757419-20757438 None:intergenic 40.0%
CCCATTCCACCAAATTCTTT+GGG - chr5_1:20757420-20757439 None:intergenic 40.0%
! CCCAAAGAATTTGGTGGAAT+GGG + chr5_1:20757417-20757436 Msa0723130:intron 40.0%
ACCCATTCCACCAAATTCTT+TGG - chr5_1:20757421-20757440 None:intergenic 40.0%
GTGTTTGATACTAGAGACCA+AGG + chr5_1:20757882-20757901 Msa0723130:intron 40.0%
CTATGACTCTGATTGTGATC+CGG + chr5_1:20758010-20758029 Msa0723130:intron 40.0%
!! TGTGATGTGCATTTTCAGGA+TGG + chr5_1:20758120-20758139 Msa0723130:intron 40.0%
! TATGAAAAAGCATAGCAGCC+AGG + chr5_1:20758153-20758172 Msa0723130:CDS 40.0%
TGTTGCGAACCATTGTATTG+TGG - chr5_1:20758636-20758655 None:intergenic 40.0%
! GTGTTTATCACTAGCTCTTC+TGG - chr5_1:20758770-20758789 None:intergenic 40.0%
!!! CACCATTTGTTGCTGTTTTG+TGG + chr5_1:20758787-20758806 Msa0723130:CDS 40.0%
ATTGTAGCTCTCATTGCAGA+GGG + chr5_1:20758824-20758843 Msa0723130:CDS 40.0%
CAGAGGGAAATTCAAATGCT+TGG + chr5_1:20758840-20758859 Msa0723130:CDS 40.0%
ACATGGGCATGTCATAAGAA+AGG + chr5_1:20759174-20759193 Msa0723130:CDS 40.0%
AGTGCAATGACCACTCTTAA+AGG - chr5_1:20759225-20759244 None:intergenic 40.0%
ACTTATTGGTGCAGCTTGAT+TGG + chr5_1:20759390-20759409 Msa0723130:intron 40.0%
GGAGCTGCTATCATAGTTAT+TGG + chr5_1:20759411-20759430 Msa0723130:CDS 40.0%
!! GCTTTTGTTTGACAACAGAG+GGG - chr5_1:20759514-20759533 None:intergenic 40.0%
AGCATGGATATATAGGAGGA+CGG + chr5_1:20759531-20759550 Msa0723130:exon 40.0%
CAAGAAAAAATGGCGAGTGG+AGG + chr5_1:20754502-20754521 Msa0723130:exon 45.0%
GCTCAAATTGTTGAAGTGGG+TGG + chr5_1:20754553-20754572 Msa0723130:CDS 45.0%
! GAGGAGCTCTTTTTCTATGG+TGG - chr5_1:20754684-20754703 None:intergenic 45.0%
! GAGGAGGAGCTCTTTTTCTA+TGG - chr5_1:20754687-20754706 None:intergenic 45.0%
ACAATAGCTGAAGCCAACGT+GGG - chr5_1:20754959-20754978 None:intergenic 45.0%
AACAATAGCTGAAGCCAACG+TGG - chr5_1:20754960-20754979 None:intergenic 45.0%
GCAAGTATGAAGGTGAAAGC+AGG - chr5_1:20754992-20755011 None:intergenic 45.0%
GAAAAGACAAGCTTCCTACC+GGG - chr5_1:20755395-20755414 None:intergenic 45.0%
TGCTCGCTAATCGACTGAAA+CGG + chr5_1:20755712-20755731 Msa0723130:intron 45.0%
TGTTGAGGTCCACTCTATAC+TGG + chr5_1:20755773-20755792 Msa0723130:intron 45.0%
ACGTGTTGTCCAGTATAGAG+TGG - chr5_1:20755785-20755804 None:intergenic 45.0%
!! CTTCGTTGAGTGGATTGTCT+TGG - chr5_1:20755817-20755836 None:intergenic 45.0%
AGACAATCCACTCAACGAAG+AGG + chr5_1:20755817-20755836 Msa0723130:intron 45.0%
TCAACGAAGAGGAAGTCGAA+GGG + chr5_1:20755828-20755847 Msa0723130:intron 45.0%
! GTGGATTTGGGGTTTCTTCA+TGG + chr5_1:20755903-20755922 Msa0723130:intron 45.0%
CATGGTGTGCTTATGCGAAT+TGG + chr5_1:20755921-20755940 Msa0723130:intron 45.0%
GTGCTTATGCGAATTGGAGT+CGG + chr5_1:20755927-20755946 Msa0723130:intron 45.0%
GAATTGGAGTCGGTGAGAAA+TGG + chr5_1:20755937-20755956 Msa0723130:intron 45.0%
CCTTGTGTATTAGAGTCGAG+AGG - chr5_1:20756106-20756125 None:intergenic 45.0%
CCTCTCGACTCTAATACACA+AGG + chr5_1:20756103-20756122 Msa0723130:intron 45.0%
CTCGACTCTAATACACAAGG+CGG + chr5_1:20756106-20756125 Msa0723130:intron 45.0%
!! ATACACAAGGCGGTTGATAG+AGG + chr5_1:20756116-20756135 Msa0723130:intron 45.0%
CTTTAAATAGGCTAGGCCGT+AGG - chr5_1:20756197-20756216 None:intergenic 45.0%
!! AGCTGGGCTTTAAATAGGCT+AGG - chr5_1:20756204-20756223 None:intergenic 45.0%
! AGCCTATTTAAAGCCCAGCT+CGG + chr5_1:20756204-20756223 Msa0723130:intron 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr5_1:20756580-20756599 Msa0723130:intron 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr5_1:20756580-20756599 Msa0723130:intron 45.0%
! GCCTTTAAAAAGGTCAGGTC+AGG + chr5_1:20756602-20756621 Msa0723130:intron 45.0%
! GCCTGACCTGACCTTTTTAA+AGG - chr5_1:20756768-20756787 None:intergenic 45.0%
CCTCGAAAATGAGCCTATGA+CGG + chr5_1:20756787-20756806 Msa0723130:intron 45.0%
CTCGAAAATGAGCCTATGAC+GGG + chr5_1:20756788-20756807 Msa0723130:intron 45.0%
!! ATGAGCCTATGACGGGTAAT+AGG + chr5_1:20756795-20756814 Msa0723130:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG + chr5_1:20756837-20756856 Msa0723130:intron 45.0%
CTTGTACCTAGAGGTGGAAA+TGG - chr5_1:20756889-20756908 None:intergenic 45.0%
CGCAACTTACTTGTACCTAG+AGG - chr5_1:20756898-20756917 None:intergenic 45.0%
!!! CTTGTTTTGCATGGCCAATG+TGG + chr5_1:20756961-20756980 Msa0723130:intron 45.0%
TTCCAGTACCCATCACATGT+TGG - chr5_1:20757129-20757148 None:intergenic 45.0%
GGAAACGAATAAATGCGTGG+AGG + chr5_1:20757221-20757240 Msa0723130:intron 45.0%
!!! ATCAATGTGTTTTGGTGGGG+AGG + chr5_1:20757366-20757385 Msa0723130:intron 45.0%
!!! CTTTGGGGCATTTTATCTCG+CGG - chr5_1:20757404-20757423 None:intergenic 45.0%
! CCCCAAAGAATTTGGTGGAA+TGG + chr5_1:20757416-20757435 Msa0723130:intron 45.0%
! AGCGATTTTCGTATGAGCTG+AGG + chr5_1:20757483-20757502 Msa0723130:intron 45.0%
! TGATTTGGATATGTGGGGCT+GGG - chr5_1:20757517-20757536 None:intergenic 45.0%
AGCAGCCAGGCAAAAGTTAT+TGG + chr5_1:20758166-20758185 Msa0723130:CDS 45.0%
! CTGTGCCAATAACTTTTGCC+TGG - chr5_1:20758174-20758193 None:intergenic 45.0%
GGCAAAAGTTATTGGCACAG+TGG + chr5_1:20758174-20758193 Msa0723130:CDS 45.0%
ACAAGTAAATGTGGCCGATG+CGG + chr5_1:20758454-20758473 Msa0723130:intron 45.0%
GGCCGATGCGGATTTAATTA+TGG + chr5_1:20758466-20758485 Msa0723130:intron 45.0%
GCAATTGCGGCCGAATATAA+AGG + chr5_1:20758546-20758565 Msa0723130:intron 45.0%
CTCTGCAATGAGAGCTACAA+TGG - chr5_1:20758825-20758844 None:intergenic 45.0%
CATTGTAGCTCTCATTGCAG+AGG + chr5_1:20758823-20758842 Msa0723130:CDS 45.0%
AGTGGTCATTGCACTTAGCA+TGG + chr5_1:20759230-20759249 Msa0723130:CDS 45.0%
GTGGTCATTGCACTTAGCAT+GGG + chr5_1:20759231-20759250 Msa0723130:CDS 45.0%
TGGTCATTGCACTTAGCATG+GGG + chr5_1:20759232-20759251 Msa0723130:CDS 45.0%
!! TTATTATCATTATTATTATT+AGG + chr5_1:20758918-20758937 Msa0723130:intron 5.0%
!!! TATATTTTTTTTTATCAAAA+AGG + chr5_1:20759648-20759667 Msa0723130:three_prime_UTR 5.0%
! CTATGGTGGAAGAGAGTGGA+TGG - chr5_1:20754670-20754689 None:intergenic 50.0%
AGATAGGATACGTTCCCGGT+AGG + chr5_1:20755378-20755397 Msa0723130:intron 50.0%
! GGAGCAGTCTGTGTTTGTTG+AGG + chr5_1:20755758-20755777 Msa0723130:intron 50.0%
TCGACTTCCTCTTCGTTGAG+TGG - chr5_1:20755827-20755846 None:intergenic 50.0%
CTCAACGAAGAGGAAGTCGA+AGG + chr5_1:20755827-20755846 Msa0723130:intron 50.0%
GAAGGGATGGAGAGAGGAAT+TGG + chr5_1:20755845-20755864 Msa0723130:intron 50.0%
TCGGTGAGAAATGGATCCAG+TGG + chr5_1:20755946-20755965 Msa0723130:intron 50.0%
AGCCTATTGTACCCAGCCAA+GGG + chr5_1:20756027-20756046 Msa0723130:intron 50.0%
AACCCTTGGCTGGGTACAAT+AGG - chr5_1:20756032-20756051 None:intergenic 50.0%
GTACAAGTAGGGGTGGGAAT+AGG + chr5_1:20756152-20756171 Msa0723130:intron 50.0%
! CCGTCATAGGCTCATTTTCG+AGG - chr5_1:20756790-20756809 None:intergenic 50.0%
AAAAATGCTAGGCCTGAGCC+TGG - chr5_1:20756821-20756840 None:intergenic 50.0%
GACTTTGTAAGGCCTAAGCC+TGG - chr5_1:20756852-20756871 None:intergenic 50.0%
GGCTTAGGCCTTACAAAGTC+CGG + chr5_1:20756852-20756871 Msa0723130:intron 50.0%
AACAACAGATGGGACACCAC+TGG - chr5_1:20756926-20756945 None:intergenic 50.0%
! GTTTTGCATGGCCAATGTGG+TGG + chr5_1:20756964-20756983 Msa0723130:intron 50.0%
ACGTTGTGCTTCCACCACAT+TGG - chr5_1:20756978-20756997 None:intergenic 50.0%
CAGTCGTAATATGAGTGGGG+CGG + chr5_1:20757072-20757091 Msa0723130:intron 50.0%
!! GTCCAACATGTGATGGGTAC+TGG + chr5_1:20757124-20757143 Msa0723130:intron 50.0%
! GACGAGCATTGTCGAAGGAA+GGG + chr5_1:20757245-20757264 Msa0723130:intron 50.0%
AGCATTGTCGAAGGAAGGGA+AGG + chr5_1:20757249-20757268 Msa0723130:intron 50.0%
!!! ATGTGTTTTGGTGGGGAGGA+AGG + chr5_1:20757370-20757389 Msa0723130:intron 50.0%
!! CTGATTTGGATATGTGGGGC+TGG - chr5_1:20757518-20757537 None:intergenic 50.0%
GCACAGTGGTCTCTATTGCA+GGG + chr5_1:20758188-20758207 Msa0723130:CDS 50.0%
CACAGTGGTCTCTATTGCAG+GGG + chr5_1:20758189-20758208 Msa0723130:CDS 50.0%
! GGTGCTTTTCTTCTTGCAGC+TGG + chr5_1:20758322-20758341 Msa0723130:CDS 50.0%
! GCATCGGCCACATTTACTTG+TGG - chr5_1:20758455-20758474 None:intergenic 50.0%
GGTCATTGCACTTAGCATGG+GGG + chr5_1:20759233-20759252 Msa0723130:CDS 50.0%
GATATGGGCACAAGCTCAAG+AGG + chr5_1:20759446-20759465 Msa0723130:CDS 50.0%
CGAAGAGGAAGTCGAAGGGA+TGG + chr5_1:20755832-20755851 Msa0723130:intron 55.0%
GAAGTCGAAGGGATGGAGAG+AGG + chr5_1:20755839-20755858 Msa0723130:intron 55.0%
GAGCCTATTGTACCCAGCCA+AGG + chr5_1:20756026-20756045 Msa0723130:intron 55.0%
TCATGGGGTACAAGTAGGGG+TGG + chr5_1:20756145-20756164 Msa0723130:intron 55.0%
CATGGGGTACAAGTAGGGGT+GGG + chr5_1:20756146-20756165 Msa0723130:intron 55.0%
!! GGCCGAGCTGGGCTTTAAAT+AGG - chr5_1:20756209-20756228 None:intergenic 55.0%
CCTGGCCTATTACCCGTCAT+AGG - chr5_1:20756803-20756822 None:intergenic 55.0%
!! CCTATGACGGGTAATAGGCC+AGG + chr5_1:20756800-20756819 Msa0723130:intron 55.0%
! CCTAGAGGTGGAAATGGGCT+AGG - chr5_1:20756883-20756902 None:intergenic 55.0%
CCTAGCCCATTTCCACCTCT+AGG + chr5_1:20756880-20756899 Msa0723130:intron 55.0%
! GGACGAGCATTGTCGAAGGA+AGG + chr5_1:20757244-20757263 Msa0723130:intron 55.0%
GGCACAGTGGTCTCTATTGC+AGG + chr5_1:20758187-20758206 Msa0723130:CDS 55.0%
!! ATGGGGATAACGGGTCACCC+TGG - chr5_1:20756058-20756077 None:intergenic 60.0%
AGTAGGGGTGGGAATAGGCC+AGG + chr5_1:20756157-20756176 Msa0723130:intron 60.0%
TAAACGAGCTGGGCCGAGCT+GGG - chr5_1:20756220-20756239 None:intergenic 60.0%
ATAAACGAGCTGGGCCGAGC+TGG - chr5_1:20756221-20756240 None:intergenic 60.0%
GCCTATTAAGCCCATCGGGC+CGG + chr5_1:20756312-20756331 Msa0723130:intron 60.0%
GCTTAATAGGCCGGCCCGAT+GGG - chr5_1:20756325-20756344 None:intergenic 60.0%
AGCTTAATAGGCCGGCCCGA+TGG - chr5_1:20756326-20756345 None:intergenic 60.0%
ACGGGTAATAGGCCAGGCTC+AGG + chr5_1:20756806-20756825 Msa0723130:intron 60.0%
AGGCCTTACAAAGTCCGGCC+CGG + chr5_1:20756857-20756876 Msa0723130:intron 60.0%
!! AGGTGGAAATGGGCTAGGCC+GGG - chr5_1:20756878-20756897 None:intergenic 60.0%
!! GAGGTGGAAATGGGCTAGGC+CGG - chr5_1:20756879-20756898 None:intergenic 60.0%
AGTAAGTTGCGGCGCACCAG+TGG + chr5_1:20756907-20756926 Msa0723130:intron 60.0%
! GAGGGGACGAGCATTGTCGA+AGG + chr5_1:20757240-20757259 Msa0723130:intron 60.0%
AATAGGCCAGGCCGTCCGAC+AGG + chr5_1:20756169-20756188 Msa0723130:intron 65.0%
ATAGGCCAGGCCGTCCGACA+GGG + chr5_1:20756170-20756189 Msa0723130:intron 65.0%
! GCCGGCCCGATGGGCTTAAT+AGG - chr5_1:20756316-20756335 None:intergenic 65.0%
AGGCCGGGCCGGACTTTGTA+AGG - chr5_1:20756863-20756882 None:intergenic 65.0%
TATGAGTGGGGCGGCGCAAG+AGG + chr5_1:20757081-20757100 Msa0723130:intron 65.0%
ACCCAGCCAAGGGTTGCGCC+AGG + chr5_1:20756037-20756056 Msa0723130:intron 70.0%
CCCTGGCGCAACCCTTGGCT+GGG - chr5_1:20756041-20756060 None:intergenic 70.0%
CCCAGCCAAGGGTTGCGCCA+GGG + chr5_1:20756038-20756057 Msa0723130:intron 70.0%
ACCCTGGCGCAACCCTTGGC+TGG - chr5_1:20756042-20756061 None:intergenic 70.0%
GGTCACCCTGGCGCAACCCT+TGG - chr5_1:20756046-20756065 None:intergenic 70.0%
TAGGCCAGGCCGTCCGACAG+GGG + chr5_1:20756171-20756190 Msa0723130:intron 70.0%
GCTAGGCCGTAGGCCCCTGT+CGG - chr5_1:20756187-20756206 None:intergenic 70.0%
!! GGAAATGGGCTAGGCCGGGC+CGG - chr5_1:20756874-20756893 None:intergenic 70.0%
TAGGCCCCTGTCGGACGGCC+TGG - chr5_1:20756178-20756197 None:intergenic 75.0%
GGCCGTCCGACAGGGGCCTA+CGG + chr5_1:20756178-20756197 Msa0723130:intron 75.0%
GGCCGTAGGCCCCTGTCGGA+CGG - chr5_1:20756183-20756202 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 20754493 20759859 20754493 ID=Msa0723130;Name=Msa0723130
chr5_1 mRNA 20754493 20759859 20754493 ID=Msa0723130-mRNA-1;Parent=Msa0723130;Name=Msa0723130-mRNA-1;_AED=0.26;_eAED=0.26;_QI=18|1|1|1|1|1|6|314|350
chr5_1 exon 20754493 20754755 20754493 ID=Msa0723130-mRNA-1:exon:7894;Parent=Msa0723130-mRNA-1
chr5_1 exon 20754910 20755023 20754910 ID=Msa0723130-mRNA-1:exon:7895;Parent=Msa0723130-mRNA-1
chr5_1 exon 20758138 20758378 20758138 ID=Msa0723130-mRNA-1:exon:7896;Parent=Msa0723130-mRNA-1
chr5_1 exon 20758746 20758904 20758746 ID=Msa0723130-mRNA-1:exon:7897;Parent=Msa0723130-mRNA-1
chr5_1 exon 20759138 20759289 20759138 ID=Msa0723130-mRNA-1:exon:7898;Parent=Msa0723130-mRNA-1
chr5_1 exon 20759404 20759859 20759404 ID=Msa0723130-mRNA-1:exon:7899;Parent=Msa0723130-mRNA-1
chr5_1 five_prime_UTR 20754493 20754510 20754493 ID=Msa0723130-mRNA-1:five_prime_utr;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20754511 20754755 20754511 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20754910 20755023 20754910 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20758138 20758378 20758138 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20758746 20758904 20758746 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20759138 20759289 20759138 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 CDS 20759404 20759545 20759404 ID=Msa0723130-mRNA-1:cds;Parent=Msa0723130-mRNA-1
chr5_1 three_prime_UTR 20759546 20759859 20759546 ID=Msa0723130-mRNA-1:three_prime_utr;Parent=Msa0723130-mRNA-1
Gene Sequence

>Msa0723130

ATGGCGAGTGGAGGAGCAAGTGTAACAACAACAATGATTGCAGCTCAAATTGTTGAAGTGGGTGGTGAAACTCTAATGAAATCAGCCACAAAAGATGGAATGAGTGTTTTTATTTTCATTGTTTACACAAACCTTTTAGCTCTATGTTTTCTTCTACCATCCACTCTCTTCCACCATAGAAAAAGAGCTCCTCCTCCAATTTCAACATCAATTTTCTATAGATTACTTCTTCTTGGTTGCCTCAAAACTGCAACTCATATGTTAATGACTTCTGGAATTAAATTCAGTTCTCCCACGTTGGCTTCAGCTATTGTTAATCTTGTCCCTGCTTTCACCTTCATACTTGCTATAATTTCAAGGATGGAAGTTCTAAATATGAAAAAGCATAGCAGCCAGGCAAAAGTTATTGGCACAGTGGTCTCTATTGCAGGGGCATTAGTTGTGACATTTTATAAAGGGATACCATTGATTAATGATGCCAATAAAAATATAGAAATGGGAGCAAGTGGAATTTTCCTTTTAGGGAAATCAGATTGGATAATTGGTGCTTTTCTTCTTGCAGCTGGTAGCTTTTGTCTTTCTCTTCTGTTTATTGTCCAGACTTGGATTGTCAGGGATTATCCAGAAGAGCTAGTGATAAACACCATTTGTTGCTGTTTTGTGGTAATCATATCTACCATTGTAGCTCTCATTGCAGAGGGAAATTCAAATGCTTGGAGACTCAGACCTGATAAACAGTTGCTATCTGTTGTTTACTCAGCAGCTTTTGTGGAATCATTGAAGAATGTTATACACACATGGGCATGTCATAAGAAAGGACCAATATATGTAGCTATGTTCAAACCTTTAAGAGTGGTCATTGCACTTAGCATGGGGGTTATATTTTTGGGAGACAATCTTTATCTTGGAAGCTTGATTGGAGCTGCTATCATAGTTATTGGATTTTATGCTGTGATATGGGCACAAGCTCAAGAGGAACACATAACAAGTGAAAATAACATTTTGTCATCTTCTTCAGCCCCTCTGTTGTCAAACAAAAGCATGGATATATAG
Protein sequence

>Msa0723130

MASGGASVTTTMIAAQIVEVGGETLMKSATKDGMSVFIFIVYTNLLALCFLLPSTLFHHRKRAPPPISTSIFYRLLLLGCLKTATHMLMTSGIKFSSPTLASAIVNLVPAFTFILAIISRMEVLNMKKHSSQAKVIGTVVSIAGALVVTFYKGIPLINDANKNIEMGASGIFLLGKSDWIIGAFLLAAGSFCLSLLFIVQTWIVRDYPEELVINTICCCFVVIISTIVALIAEGNSNAWRLRPDKQLLSVVYSAAFVESLKNVIHTWACHKKGPIYVAMFKPLRVVIALSMGVIFLGDNLYLGSLIGAAIIVIGFYAVIWAQAQEEHITSENNILSSSSAPLLSNKSMDI*