AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1309240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309240 MtrunA17_Chr8g0335841 98.100 579 10 1 1 579 1 578 0.0 1171
Msa1309240 MtrunA17_Chr2g0298001 35.563 568 301 10 47 578 55 593 6.59e-111 344
Msa1309240 MtrunA17_Chr4g0072181 39.011 364 190 6 207 562 36 375 5.97e-84 266
Msa1309240 MtrunA17_Chr4g0072141 39.823 339 166 7 251 578 1 312 7.29e-74 238
Msa1309240 MtrunA17_Chr4g0072161 34.908 381 205 5 155 501 34 405 4.27e-71 234
Msa1309240 MtrunA17_Chr4g0067881 23.295 352 224 10 23 354 14 339 3.97e-18 88.2
Msa1309240 MtrunA17_Chr8g0391331 25.347 288 189 8 88 354 59 341 1.31e-17 86.7
Msa1309240 MtrunA17_Chr4g0025921 28.571 294 183 11 84 354 40 329 5.41e-17 84.3
Msa1309240 MtrunA17_Chr1g0211491 23.962 313 197 9 61 354 6 296 1.67e-15 79.7
Msa1309240 MtrunA17_Chr1g0150111 22.490 498 296 18 112 573 90 533 2.06e-15 79.3
Msa1309240 MtrunA17_Chr4g0025931 25.623 281 184 7 96 354 38 315 1.19e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309240 AT3G13490.1 79.541 523 104 2 60 579 80 602 0.0 876
Msa1309240 AT3G11710.1 37.217 575 278 11 52 579 73 611 2.75e-110 343
Msa1309240 AT4G26870.1 23.265 490 291 17 116 573 88 524 1.22e-20 95.9
Msa1309240 AT4G33760.1 26.415 265 171 6 109 354 84 343 8.90e-17 84.3
Msa1309240 AT4G33760.2 27.957 186 126 3 176 354 23 207 1.12e-11 67.8

Find 158 sgRNAs with CRISPR-Local

Find 673 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATATATATAGAGATTT+AGG 0.190041 8_4:+5729911 Msa1309240:CDS
GTTGTCTAATTTGATCTTCT+AGG 0.228868 8_4:-5738410 None:intergenic
CGGGATCGATTTCAATGAAT+TGG 0.236564 8_4:+5737177 Msa1309240:CDS
TTCCTAACGGCTTTGGAGTA+TGG 0.242936 8_4:+5738528 Msa1309240:CDS
ACAATTAAACGCACAGAAAA+AGG 0.251919 8_4:+5730313 Msa1309240:CDS
TATGGAATGCCTCCAGCTTC+TGG 0.268256 8_4:+5738546 Msa1309240:CDS
TAGGTTATGTTATAATATTT+TGG 0.288428 8_4:+5738988 Msa1309240:three_prime_UTR
AAAGCTTACTGTTGATTATC+AGG 0.299156 8_4:+5736986 Msa1309240:CDS
AATCCACAAACCTGCAAAAC+TGG 0.301957 8_4:-5734826 None:intergenic
TCATCAAAGGGTTCCATGTT+AGG 0.314745 8_4:-5728543 None:intergenic
CGGAGGACAATGGATTCTTT+AGG 0.322824 8_4:+5734784 Msa1309240:CDS
CGATGATTTCCTAACGGCTT+TGG 0.326372 8_4:+5738521 Msa1309240:CDS
AACAAAACTGTCCTTATTGT+TGG 0.332509 8_4:-5738744 None:intergenic
ATCTCACCAGCATTCTCTTT+AGG 0.332997 8_4:-5735728 None:intergenic
GCCAATGGAGATATCTCAAT+TGG 0.333726 8_4:-5737575 None:intergenic
TTGACACTAAGAGACGATTC+AGG 0.336175 8_4:+5730022 Msa1309240:CDS
ATTGTTGCTAGGAGAGCATT+TGG 0.336932 8_4:+5729986 Msa1309240:CDS
AATCTTGTTAAAGAAATTTC+CGG 0.340550 8_4:+5737157 Msa1309240:CDS
GTGCATGGTCTCCCTCCTCC+AGG 0.349566 8_4:-5737134 None:intergenic
GGTGCTCCCACTTGGTGACT+TGG 0.353717 8_4:+5739009 Msa1309240:three_prime_UTR
ACCTCTATAGTTGTAAATTC+CGG 0.362930 8_4:-5736295 None:intergenic
AGACGATTCAGGGACAATTC+AGG 0.369249 8_4:+5730033 Msa1309240:CDS
TTACATTCTTTCCAGGGACT+TGG 0.388887 8_4:+5738646 Msa1309240:intron
ATCTTGTTAAAGAAATTTCC+GGG 0.390588 8_4:+5737158 Msa1309240:CDS
TGGAAGCTTACCTGATCTAT+AGG 0.390653 8_4:-5738018 None:intergenic
TTCATTGATTAGGGAGAAGC+TGG 0.396179 8_4:+5735624 Msa1309240:intron
TTGAAGGCATATGTTGATAT+TGG 0.396591 8_4:+5730268 Msa1309240:CDS
ACTGATCATGTATCTATTGC+GGG 0.404455 8_4:+5729959 Msa1309240:CDS
CTGCTAAATTCATCATGCTT+TGG 0.405344 8_4:-5736926 None:intergenic
TCCAGGGACTTGGGATTGAC+AGG 0.408551 8_4:+5738656 Msa1309240:intron
GTACTCAAGGTCCAACAATA+AGG 0.410867 8_4:+5738733 Msa1309240:CDS
TCATGATGCTCTTTCAACTA+AGG 0.415332 8_4:-5738919 None:intergenic
AATGTAGGTTGGATGAGCTT+TGG 0.416343 8_4:-5737539 None:intergenic
GGCTATTACATCTCTAATGC+TGG 0.425350 8_4:-5738704 None:intergenic
GGGATCGATTTCAATGAATT+GGG 0.428050 8_4:+5737178 Msa1309240:CDS
ACAGGGAGTTGAGATATGTT+TGG 0.433439 8_4:+5737105 Msa1309240:intron
TATTGTTGGACCTTGAGTAC+TGG 0.435483 8_4:-5738730 None:intergenic
ATTCAAAGGTTATCTTGTCT+TGG 0.440813 8_4:+5738942 Msa1309240:three_prime_UTR
TTTCTTTATGGCAGGTGGGT+GGG 0.442944 8_4:+5736209 Msa1309240:intron
ATATATAGAGATTTAGGAAA+TGG 0.443716 8_4:+5729917 Msa1309240:CDS
ATCGTCTCTTAGTGTCAAAA+AGG 0.444746 8_4:-5730017 None:intergenic
AAAGCAGCTCTTTCAACAAA+TGG 0.446908 8_4:+5738444 Msa1309240:CDS
GGCAGATTGGCATGCTTCAA+TGG 0.449344 8_4:-5737275 None:intergenic
CAGTGTGCTCTTGCAGTTCA+CGG 0.450059 8_4:+5736963 Msa1309240:CDS
TTCATTTGTGGTCGGGAACT+AGG 0.452404 8_4:+5737970 Msa1309240:CDS
GGTCGAATATTTAGAAATGA+AGG 0.453886 8_4:+5736253 Msa1309240:CDS
CTCCCTATCGGAGGTGGAAG+TGG 0.454419 8_4:-5728680 None:intergenic
GTGACATACCACAATTCTCT+TGG 0.455727 8_4:+5735669 Msa1309240:CDS
AATATCAACTCGTCATAATC+CGG 0.456214 8_4:+5736276 Msa1309240:CDS
ACGGCGGTTGCGACCGGAGG+AGG 0.461545 8_4:-5728638 None:intergenic
TGATCAGTTTGAGCAGTTGA+AGG 0.461596 8_4:+5730252 Msa1309240:CDS
GTGCTCCCACTTGGTGACTT+GGG 0.462921 8_4:+5739010 Msa1309240:three_prime_UTR
CGGAACACATCAGCTACCTC+TGG 0.463336 8_4:-5733856 None:intergenic
TCTTATTCAACCACCTCCTC+CGG 0.464171 8_4:+5728625 Msa1309240:CDS
GAAATAGTAAATAATGATGA+TGG 0.470287 8_4:-5738805 None:intergenic
GAATGAAATTGTTCATCAAA+GGG 0.470592 8_4:-5728555 None:intergenic
GTTAGACCGTGATATTTGTC+AGG 0.473334 8_4:-5732842 None:intergenic
CCGTGATATTTGTCAGGAAG+TGG 0.479675 8_4:-5732836 None:intergenic
CTGATACTCGATAGATAGAA+AGG 0.480701 8_4:+5728488 Msa1309240:five_prime_UTR
TAAGTAGGTGGCCGGCAGAT+TGG 0.482101 8_4:-5737288 None:intergenic
AGATATGTTTGGAAAGGCCC+TGG 0.482975 8_4:+5737116 Msa1309240:CDS
AGTCTAAAACAAATGTAGGT+TGG 0.484037 8_4:-5737550 None:intergenic
ATTGTTGGACCTTGAGTACT+GGG 0.484670 8_4:-5738729 None:intergenic
CAATTCATTGAAATCGATCC+CGG 0.486294 8_4:-5737176 None:intergenic
TACATTCTTTCCAGGGACTT+GGG 0.488188 8_4:+5738647 Msa1309240:intron
CAAGCTACTCTGAGTACCCT+TGG 0.488990 8_4:+5737223 Msa1309240:CDS
TGATCCTCCATTAGATCCAC+AGG 0.489528 8_4:+5737925 Msa1309240:intron
TGAATGAAATTGTTCATCAA+AGG 0.490381 8_4:-5728556 None:intergenic
TGCATGGTCTCCCTCCTCCA+GGG 0.495010 8_4:-5737133 None:intergenic
AGAATTACGGCGGTTGCGAC+CGG 0.496601 8_4:-5728644 None:intergenic
TCGAGCCATGCGCTTGAAGA+AGG 0.504415 8_4:+5728708 Msa1309240:CDS
GTTTGGAAAGGCCCTGGAGG+AGG 0.505574 8_4:+5737122 Msa1309240:CDS
ATCGGAGGTGGAAGTGGTGG+AGG 0.505995 8_4:-5728674 None:intergenic
TTCTTTAACAAGATTGTGCA+TGG 0.506016 8_4:-5737149 None:intergenic
TTGTTCCACTCATAAGCATA+GGG 0.506743 8_4:-5729866 None:intergenic
TGTTATCAAGATTCTTTCCA+AGG 0.509846 8_4:-5737240 None:intergenic
TTATGTACCATTCCAGAAGC+TGG 0.510329 8_4:-5738558 None:intergenic
ATTGACTGATCCTATAGATC+AGG 0.512443 8_4:+5738008 Msa1309240:CDS
ACAAACCCTAAAAGTATTGG+TGG 0.514292 8_4:+5728437 None:intergenic
TGGAGGACGACGGAGAATTA+CGG 0.514870 8_4:-5728657 None:intergenic
TGACACTAAGAGACGATTCA+GGG 0.517242 8_4:+5730023 Msa1309240:CDS
TCCGGAATTTACAACTATAG+AGG 0.517384 8_4:+5736294 Msa1309240:CDS
GTTTCAGCTCTATTGCGAAA+AGG 0.520137 8_4:+5730219 Msa1309240:intron
GGGTAGTCTAAAACAAATGT+AGG 0.521669 8_4:-5737554 None:intergenic
GGGACTTGGGATTGACAGGT+TGG 0.522638 8_4:+5738660 Msa1309240:intron
AATAGACTCCCTATCGGAGG+TGG 0.524551 8_4:-5728686 None:intergenic
TTTGTTCCACTCATAAGCAT+AGG 0.524967 8_4:-5729867 None:intergenic
TGTCACGAATGGTCTAGCTT+CGG 0.528109 8_4:-5735652 None:intergenic
GATCCACAGGTTTGACTGAG+AGG 0.535806 8_4:+5737938 Msa1309240:intron
CACCACTTCCACCTCCGATA+GGG 0.536439 8_4:+5728678 Msa1309240:CDS
CTGCGGTGTGGTTTAGCCAA+TGG 0.537930 8_4:-5737590 None:intergenic
AAAGAGCATCATGAATTCAA+AGG 0.537938 8_4:+5738928 Msa1309240:three_prime_UTR
CCACCACTTCCACCTCCGAT+AGG 0.542347 8_4:+5728677 Msa1309240:CDS
AAAAGAAGGAATAGAAAATG+AGG 0.543923 8_4:+5738473 Msa1309240:CDS
GCGGTTGCGACCGGAGGAGG+TGG 0.544216 8_4:-5728635 None:intergenic
TTCCATACTCCAAAGCCGTT+AGG 0.545247 8_4:-5738530 None:intergenic
CCCAATTGAGATATCTCCAT+TGG 0.547983 8_4:+5737574 Msa1309240:CDS
TTTGGAAAGGCCCTGGAGGA+GGG 0.552293 8_4:+5737123 Msa1309240:CDS
CCAATGGAGATATCTCAATT+GGG 0.556267 8_4:-5737574 None:intergenic
GTTATCAAGATTCTTTCCAA+GGG 0.558076 8_4:-5737239 None:intergenic
TATAGGTTGTATCAGAGATA+CGG 0.559036 8_4:+5734764 Msa1309240:intron
AACCTCGTTAAGTAGGTGGC+CGG 0.559200 8_4:-5737296 None:intergenic
GACTGATCATGTATCTATTG+CGG 0.565649 8_4:+5729958 Msa1309240:CDS
ATTGAAGCATGCCAATCTGC+CGG 0.566605 8_4:+5737277 Msa1309240:CDS
TTGCGGGAAGAATTGTTGCT+AGG 0.568965 8_4:+5729975 Msa1309240:CDS
GCCAATCAACCTCGTTAAGT+AGG 0.570615 8_4:-5737303 None:intergenic
GCTATTACATCTCTAATGCT+GGG 0.573314 8_4:-5738703 None:intergenic
TGAAACTGTTGAACCTAACA+TGG 0.574370 8_4:+5728530 Msa1309240:CDS
CCTATCGGAGGTGGAAGTGG+TGG 0.578335 8_4:-5728677 None:intergenic
GTTGAAGAACTTAGAAGCAA+GGG 0.578950 8_4:+5729836 Msa1309240:CDS
GTGGAAGTGGTGGAGGACGA+CGG 0.581495 8_4:-5728667 None:intergenic
AGGTACCTTCTTCAAGCGCA+TGG 0.583817 8_4:-5728713 None:intergenic
TGGTGACTTGGGTCACAAGT+TGG 0.585414 8_4:+5739021 Msa1309240:three_prime_UTR
GGTGGTTGAATAAGAAGAAG+AGG 0.585694 8_4:-5728617 None:intergenic
GGTTGAAGAACTTAGAAGCA+AGG 0.589657 8_4:+5729835 Msa1309240:intron
AATAGCCTTCCCAGTACTCA+AGG 0.592780 8_4:+5738720 Msa1309240:CDS
TTGGACCTTGAGTACTGGGA+AGG 0.593720 8_4:-5738725 None:intergenic
TGGAAAGAATCTTGATAACA+AGG 0.594763 8_4:+5737243 Msa1309240:CDS
TCTTGACGATGATTTCCTAA+CGG 0.595091 8_4:+5738515 Msa1309240:CDS
ATTACGGCGGTTGCGACCGG+AGG 0.596381 8_4:-5728641 None:intergenic
TGGTTTATTCTCGTAAGCGA+AGG 0.599011 8_4:+5728457 Msa1309240:five_prime_UTR
GTTGATATTGGTGATATACT+AGG 0.599745 8_4:+5730280 Msa1309240:CDS
GAGTTGAGATATGTTTGGAA+AGG 0.602646 8_4:+5737110 Msa1309240:CDS
AATGCCTCCAGCTTCTGGAA+TGG 0.606421 8_4:+5738551 Msa1309240:CDS
GGATTCTTTAGGTTTCGTTG+AGG 0.620350 8_4:+5734795 Msa1309240:CDS
GGTGATATACTAGGTGCAAG+AGG 0.623168 8_4:+5730289 Msa1309240:CDS
ATTGCACCTAAAGAGAATGC+TGG 0.624253 8_4:+5735722 Msa1309240:CDS
GGCTCGAATAGACTCCCTAT+CGG 0.627417 8_4:-5728692 None:intergenic
GCAGCTCTTTCAACAAATGG+TGG 0.630345 8_4:+5738447 Msa1309240:CDS
GAATTGTGGTATGTCACGAA+TGG 0.630545 8_4:-5735663 None:intergenic
AATCAACCTCGTTAAGTAGG+TGG 0.632135 8_4:-5737300 None:intergenic
ATTGATTAGGGAGAAGCTGG+AGG 0.632319 8_4:+5735627 Msa1309240:intron
AGTCTCTTCCAAGAGAATTG+TGG 0.632957 8_4:-5735677 None:intergenic
TTGAAGAACTTAGAAGCAAG+GGG 0.633912 8_4:+5729837 Msa1309240:CDS
CCACTTCCTGACAAATATCA+CGG 0.639790 8_4:+5732836 Msa1309240:CDS
TGAATTATTTGTATACCACA+TGG 0.641904 8_4:+5738870 Msa1309240:three_prime_UTR
ATCAGAGATACGGAGGACAA+TGG 0.644056 8_4:+5734774 Msa1309240:CDS
CATTGGCTAAACCACACCGC+AGG 0.647461 8_4:+5737591 Msa1309240:CDS
TGAATTGGGAAATGATCTCG+AGG 0.648978 8_4:+5737192 Msa1309240:CDS
AAACCTCTCAGTCAAACCTG+TGG 0.652940 8_4:-5737941 None:intergenic
AAGCATGATGAATTTAGCAG+AGG 0.654036 8_4:+5736929 Msa1309240:CDS
TAGATATACGCTATCGCCAG+AGG 0.655561 8_4:+5732870 Msa1309240:CDS
GCGCGGATAAGAAGCGTGCG+AGG 0.659601 8_4:-5728595 None:intergenic
TTGTGACCCAAGTCACCAAG+TGG 0.661106 8_4:-5739016 None:intergenic
ATGCTTAATCAAATTCCATG+TGG 0.663099 8_4:-5738885 None:intergenic
TGTGTTCCGCAAAAGAGCCA+AGG 0.669538 8_4:+5733870 Msa1309240:CDS
TTGATCCCTATGCTTATGAG+TGG 0.674098 8_4:+5729861 Msa1309240:CDS
TCGAATAGACTCCCTATCGG+AGG 0.677501 8_4:-5728689 None:intergenic
TTGAATAAGAAGAAGAGGCG+CGG 0.683601 8_4:-5728612 None:intergenic
TGTACCATTCCAGAAGCTGG+AGG 0.684157 8_4:-5738555 None:intergenic
TGCCGGCCACCTACTTAACG+AGG 0.691412 8_4:+5737294 Msa1309240:CDS
TATGTTTGGAAAGGCCCTGG+AGG 0.696991 8_4:+5737119 Msa1309240:CDS
AGATATGATTGCAAATCCAG+AGG 0.699255 8_4:+5733840 Msa1309240:CDS
AGGTTGTATCAGAGATACGG+AGG 0.705032 8_4:+5734767 Msa1309240:intron
AAATGTATATACCTGCGGTG+TGG 0.716733 8_4:-5737602 None:intergenic
AATATTATAACATAACCTAG+AGG 0.718813 8_4:-5738984 None:intergenic
TGTGACCCAAGTCACCAAGT+GGG 0.729165 8_4:-5739015 None:intergenic
AGGACGACGGAGAATTACGG+CGG 0.797261 8_4:-5728654 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAAAAAAAAAAAAAA+GGG - chr8_4:5732544-5732563 None:intergenic 0.0%
!! TTAATAAAAAAAAAAAAAAA+AGG - chr8_4:5732545-5732564 None:intergenic 0.0%
!! ATAAATTATATTTGTTCTTT+AGG + chr8_4:5730107-5730126 Msa1309240:intron 10.0%
!! ATAGTATAAATTATATTACA+AGG - chr8_4:5734321-5734340 None:intergenic 10.0%
!!! ATTTCTTATTGTATTTTACT+TGG + chr8_4:5728915-5728934 Msa1309240:intron 15.0%
!!! TAAATTAATGGTCTTTATTT+TGG + chr8_4:5729744-5729763 Msa1309240:intron 15.0%
!!! AAATTAATGGTCTTTATTTT+GGG + chr8_4:5729745-5729764 Msa1309240:intron 15.0%
!! ATATATATATATCGAAAACA+AGG - chr8_4:5730524-5730543 None:intergenic 15.0%
!!! CAAATTCAACATTTTTTTTA+AGG - chr8_4:5731309-5731328 None:intergenic 15.0%
!!! AAATTCAACATTTTTTTTCA+AGG - chr8_4:5731408-5731427 None:intergenic 15.0%
!! AACTTTAAATTATTCTCTAA+AGG - chr8_4:5731692-5731711 None:intergenic 15.0%
!!! ACAAGACTTTTAATTTAAAT+TGG + chr8_4:5731799-5731818 Msa1309240:intron 15.0%
!! TTATGTTAAAGTGAATAAAA+TGG + chr8_4:5732257-5732276 Msa1309240:intron 15.0%
!! GATTTAAAGAAAATTTCAAA+AGG - chr8_4:5732725-5732744 None:intergenic 15.0%
!!! TTGTTTTTTATTTAAAACCA+AGG - chr8_4:5733194-5733213 None:intergenic 15.0%
!!! TTGGTTTTAAATAAAAAACA+AGG + chr8_4:5733193-5733212 Msa1309240:intron 15.0%
!!! TGGTTTTAAATAAAAAACAA+GGG + chr8_4:5733194-5733213 Msa1309240:intron 15.0%
!!! TATACTATTCTTCAAATTTT+TGG + chr8_4:5734338-5734357 Msa1309240:intron 15.0%
!! TAATTAACAAAAATAGTAAC+AGG - chr8_4:5735121-5735140 None:intergenic 15.0%
!!! TGTTTTTTTTTTTAAATGCA+AGG + chr8_4:5735817-5735836 Msa1309240:intron 15.0%
!! AATAATTAGAATCAATATCT+AGG - chr8_4:5735967-5735986 None:intergenic 15.0%
!!! CATAAAGAAAAACTTTAAAA+TGG - chr8_4:5736199-5736218 None:intergenic 15.0%
!!! CATTTTAAAGTTTTTCTTTA+TGG + chr8_4:5736197-5736216 Msa1309240:intron 15.0%
!! TAACATCAAATTATAAGTAA+TGG - chr8_4:5736361-5736380 None:intergenic 15.0%
!!! CTTATAATTTGATGTTATTT+TGG + chr8_4:5736364-5736383 Msa1309240:intron 15.0%
!!! AAAACTAACTTAAATTTTCA+GGG - chr8_4:5736705-5736724 None:intergenic 15.0%
!!! TAAAACTAACTTAAATTTTC+AGG - chr8_4:5736706-5736725 None:intergenic 15.0%
!!! TTTGTTTCTATTATGTATTT+AGG + chr8_4:5737496-5737515 Msa1309240:intron 15.0%
!!! TAGGTTATGTTATAATATTT+TGG + chr8_4:5738988-5739007 Msa1309240:three_prime_UTR 15.0%
!! ATAGATAGAAAGGAAAAAAA+TGG + chr8_4:5728498-5728517 Msa1309240:exon 20.0%
!!! AATTTTCTTTTTGGATGAAA+TGG + chr8_4:5728860-5728879 Msa1309240:intron 20.0%
!!! AAGAAATTTTTTTGCAATGT+AGG - chr8_4:5728902-5728921 None:intergenic 20.0%
!!! ATTGTATTTTACTTGGATTT+CGG + chr8_4:5728922-5728941 Msa1309240:intron 20.0%
!! TGATATGAAAATTAATGAGT+TGG + chr8_4:5728953-5728972 Msa1309240:intron 20.0%
!!! AATAAGTTGAAAATATCCTA+TGG + chr8_4:5729547-5729566 Msa1309240:intron 20.0%
!!! ATAAGTTGAAAATATCCTAT+GGG + chr8_4:5729548-5729567 Msa1309240:intron 20.0%
!! CAAGATATATATAGAGATTT+AGG + chr8_4:5729911-5729930 Msa1309240:CDS 20.0%
!! ATATATAGAGATTTAGGAAA+TGG + chr8_4:5729917-5729936 Msa1309240:CDS 20.0%
!!! AGTATAAACTATAGACTTTT+GGG - chr8_4:5730406-5730425 None:intergenic 20.0%
!! ATTAGGATTCATGAATAATT+GGG + chr8_4:5731152-5731171 Msa1309240:intron 20.0%
!!! AATCCATGTTTGTTTTTTTT+GGG + chr8_4:5731175-5731194 Msa1309240:intron 20.0%
!! TAGATAATATCCTTATTGTT+AGG - chr8_4:5731647-5731666 None:intergenic 20.0%
!! TCCTCATATATAATATATGT+TGG - chr8_4:5732046-5732065 None:intergenic 20.0%
!! AACATATATTATATATGAGG+AGG + chr8_4:5732045-5732064 Msa1309240:intron 20.0%
!!! AGATACCTTATTTTAAGTAA+AGG + chr8_4:5732223-5732242 Msa1309240:intron 20.0%
!!! GATACCTTATTTTAAGTAAA+GGG + chr8_4:5732224-5732243 Msa1309240:intron 20.0%
!! TTATCCCTTTACTTAAAATA+AGG - chr8_4:5732231-5732250 None:intergenic 20.0%
!!! TCTTTCAAGAATTTTAAATG+TGG + chr8_4:5732597-5732616 Msa1309240:intron 20.0%
!!! AATTCAAAAAGTGCAAAAAT+AGG + chr8_4:5732692-5732711 Msa1309240:intron 20.0%
!!! ATTCAAAAAGTGCAAAAATA+GGG + chr8_4:5732693-5732712 Msa1309240:intron 20.0%
!! TATACTATTACTAATGCATT+TGG + chr8_4:5732950-5732969 Msa1309240:intron 20.0%
!! AAAATCATAGTAGTTAATAG+CGG + chr8_4:5733000-5733019 Msa1309240:intron 20.0%
!! GAAACTGAAGTTATTAATTA+GGG - chr8_4:5733233-5733252 None:intergenic 20.0%
!! AGAAACTGAAGTTATTAATT+AGG - chr8_4:5733234-5733253 None:intergenic 20.0%
!! CAAAAAGTTATATGAAATAG+CGG + chr8_4:5733430-5733449 Msa1309240:intron 20.0%
!! TTAATCATAGTAGTTAATAG+CGG - chr8_4:5733517-5733536 None:intergenic 20.0%
!! ATGAAGAGATATTTGTAAAA+CGG - chr8_4:5733791-5733810 None:intergenic 20.0%
!! TATTGCAATTCTACATATAT+AGG + chr8_4:5734038-5734057 Msa1309240:intron 20.0%
!! TCAAAATAAACTAAACTAGA+TGG + chr8_4:5734124-5734143 Msa1309240:intron 20.0%
!!! TATCCTTCAAGTTTTTAATT+AGG + chr8_4:5734267-5734286 Msa1309240:intron 20.0%
!!! ATCCTTCAAGTTTTTAATTA+GGG + chr8_4:5734268-5734287 Msa1309240:intron 20.0%
!! TGTTTGTATTAGAATGTATT+TGG + chr8_4:5734372-5734391 Msa1309240:intron 20.0%
!!! CATAATTGCTATAAATGTTT+TGG + chr8_4:5734463-5734482 Msa1309240:intron 20.0%
!!! TAGAATTTTGGTAAAACAAT+TGG + chr8_4:5734488-5734507 Msa1309240:intron 20.0%
!!! AGAATTTTGGTAAAACAATT+GGG + chr8_4:5734489-5734508 Msa1309240:intron 20.0%
!!! TTAATTAACGGATATATGAT+TGG + chr8_4:5734615-5734634 Msa1309240:intron 20.0%
!! CTGATCAATTCAATTAATAT+AGG + chr8_4:5734747-5734766 Msa1309240:intron 20.0%
!!! AGTAGTTTTGATATTTTAAC+AGG + chr8_4:5734973-5734992 Msa1309240:intron 20.0%
!! TCAAAAGTTTAGTAGTAAAT+TGG - chr8_4:5735253-5735272 None:intergenic 20.0%
!!! TTTGATAGTAACTAAAATGA+TGG + chr8_4:5735268-5735287 Msa1309240:intron 20.0%
!!! GAATAGATTTCTAAAATGAA+TGG - chr8_4:5735318-5735337 None:intergenic 20.0%
!!! TCTGATTAATTTCATTGATT+AGG + chr8_4:5735614-5735633 Msa1309240:intron 20.0%
!!! CTGATTAATTTCATTGATTA+GGG + chr8_4:5735615-5735634 Msa1309240:intron 20.0%
!!! TCTTTTTATCTTATTTAGCA+AGG + chr8_4:5735859-5735878 Msa1309240:intron 20.0%
!!! AATTCTTTTGCATTACATTT+GGG - chr8_4:5735933-5735952 None:intergenic 20.0%
!!! TAATTCTTTTGCATTACATT+TGG - chr8_4:5735934-5735953 None:intergenic 20.0%
!!! AATATGCAATTGATTTGTAA+TGG + chr8_4:5736492-5736511 Msa1309240:intron 20.0%
!!! ATATGCAATTGATTTGTAAT+GGG + chr8_4:5736493-5736512 Msa1309240:intron 20.0%
!!! TAATAACAAATTTGTTGAAG+CGG + chr8_4:5737067-5737086 Msa1309240:intron 20.0%
!! AATCTTGTTAAAGAAATTTC+CGG + chr8_4:5737157-5737176 Msa1309240:CDS 20.0%
!!! TCACATTTTATCTTTGATAT+AGG + chr8_4:5737327-5737346 Msa1309240:intron 20.0%
!!! TGCAATTAATCAAAATTTTG+AGG + chr8_4:5737390-5737409 Msa1309240:intron 20.0%
!!! AATTAATCAAAATTTTGAGG+TGG + chr8_4:5737393-5737412 Msa1309240:intron 20.0%
!!! TGAAATTTTCTGTTATCAAT+TGG + chr8_4:5737767-5737786 Msa1309240:intron 20.0%
!! TAAAGATAATATCTAGAAAC+AGG - chr8_4:5737895-5737914 None:intergenic 20.0%
!! AATGTAATCTTAGTAAATGA+AGG - chr8_4:5738633-5738652 None:intergenic 20.0%
!! GAAATAGTAAATAATGATGA+TGG - chr8_4:5738808-5738827 None:intergenic 20.0%
!! AATATTATAACATAACCTAG+AGG - chr8_4:5738987-5739006 None:intergenic 20.0%
! GAATGAAATTGTTCATCAAA+GGG - chr8_4:5728558-5728577 None:intergenic 25.0%
! TGAATGAAATTGTTCATCAA+AGG - chr8_4:5728559-5728578 None:intergenic 25.0%
!!! TTGTTTACCTAGTTAGTTTT+TGG + chr8_4:5728824-5728843 Msa1309240:intron 25.0%
!! AAGCTTCGAAATTTTCTTTT+TGG + chr8_4:5728851-5728870 Msa1309240:intron 25.0%
!! TTAAGTTGTTTGTCCTAAAA+GGG - chr8_4:5729229-5729248 None:intergenic 25.0%
!! ATTAAGTTGTTTGTCCTAAA+AGG - chr8_4:5729230-5729249 None:intergenic 25.0%
!! GTCAATGCAAATTTTCAAAT+AGG + chr8_4:5729625-5729644 Msa1309240:intron 25.0%
!!! TTTTGTTGTGTTTTTGTCAA+AGG + chr8_4:5729719-5729738 Msa1309240:intron 25.0%
!!! TTTGTTGTGTTTTTGTCAAA+GGG + chr8_4:5729720-5729739 Msa1309240:intron 25.0%
! TTGTCAAAGGGATAAATTAA+TGG + chr8_4:5729732-5729751 Msa1309240:intron 25.0%
! ACAAATATACAAAACAGAGT+TGG - chr8_4:5729814-5729833 None:intergenic 25.0%
!! ACTCTGTTTTGTATATTTGT+AGG + chr8_4:5729814-5729833 Msa1309240:intron 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG + chr8_4:5730121-5730140 Msa1309240:intron 25.0%
! GGAAGTTATATATGTTCTTT+AGG + chr8_4:5730155-5730174 Msa1309240:intron 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG + chr8_4:5730121-5730140 Msa1309240:intron 25.0%
!! CAGTATAAACTATAGACTTT+TGG - chr8_4:5730407-5730426 None:intergenic 25.0%
! CAAAAGTCTATAGTTTATAC+TGG + chr8_4:5730405-5730424 Msa1309240:intron 25.0%
! AGGAATTCAAACAAATCATT+TGG - chr8_4:5730492-5730511 None:intergenic 25.0%
! AGAGTTAGTATTTATCAAGT+TGG - chr8_4:5730593-5730612 None:intergenic 25.0%
! GTTTATTTGAGAACTTATCT+CGG + chr8_4:5730761-5730780 Msa1309240:intron 25.0%
! AAGGAAAAGTAAAAACACAA+TGG - chr8_4:5730845-5730864 None:intergenic 25.0%
! AATTTAGTCAATGAAGAGAA+AGG - chr8_4:5731027-5731046 None:intergenic 25.0%
! TATCAACTAGATTTGTCAAA+GGG - chr8_4:5731050-5731069 None:intergenic 25.0%
! TTATCAACTAGATTTGTCAA+AGG - chr8_4:5731051-5731070 None:intergenic 25.0%
! GATTAGGATTCATGAATAAT+TGG + chr8_4:5731151-5731170 Msa1309240:intron 25.0%
!!! GAATCCATGTTTGTTTTTTT+TGG + chr8_4:5731174-5731193 Msa1309240:intron 25.0%
! AACAAAAAGTCCTAACAATA+AGG + chr8_4:5731634-5731653 Msa1309240:intron 25.0%
!! AAATCTTATTAAGTTGCCAA+AGG - chr8_4:5731963-5731982 None:intergenic 25.0%
! GCCAACATATATTATATATG+AGG + chr8_4:5732042-5732061 Msa1309240:intron 25.0%
! AAGTGATATTGTAGTAAAGA+TGG - chr8_4:5732173-5732192 None:intergenic 25.0%
!! TTCAAAAAGTGCAAAAATAG+GGG + chr8_4:5732694-5732713 Msa1309240:intron 25.0%
! AGACAATAAATAACATGAGA+AGG - chr8_4:5732759-5732778 None:intergenic 25.0%
!! TCATGTTATTTATTGTCTTC+AGG + chr8_4:5732761-5732780 Msa1309240:intron 25.0%
!! CATGTTATTTATTGTCTTCA+GGG + chr8_4:5732762-5732781 Msa1309240:intron 25.0%
!! ATGTTATTTATTGTCTTCAG+GGG + chr8_4:5732763-5732782 Msa1309240:intron 25.0%
! AGCAATGATAACAAGTAAAA+GGG - chr8_4:5732926-5732945 None:intergenic 25.0%
! TTTCACGTAAAATGAAATAG+CGG - chr8_4:5733159-5733178 None:intergenic 25.0%
!!! CGCTATTTCATATAACTTTT+TGG - chr8_4:5733432-5733451 None:intergenic 25.0%
!!! CTACCTTATTCTATTTTTGT+TGG + chr8_4:5733567-5733586 Msa1309240:intron 25.0%
! ACTCCAACAAAAATAGAATA+AGG - chr8_4:5733573-5733592 None:intergenic 25.0%
! GAAAAAGTAAGAAAGAACAA+GGG - chr8_4:5733605-5733624 None:intergenic 25.0%
! TGAAAAAGTAAGAAAGAACA+AGG - chr8_4:5733606-5733625 None:intergenic 25.0%
! TGAAGAGATATTTGTAAAAC+GGG - chr8_4:5733790-5733809 None:intergenic 25.0%
! GTTTAGAAAATAAACTACCT+TGG - chr8_4:5733890-5733909 None:intergenic 25.0%
! TTCTAAACTTTATCTGCTTA+AGG + chr8_4:5733902-5733921 Msa1309240:intron 25.0%
!! ACAATCTAAAACAATAGTCT+AGG + chr8_4:5733984-5734003 Msa1309240:intron 25.0%
! AAACTCAATGAATAACAAGT+AGG + chr8_4:5734011-5734030 Msa1309240:intron 25.0%
!!! AATGTTTTGGAGTAGAATTT+TGG + chr8_4:5734476-5734495 Msa1309240:intron 25.0%
! ATCTTTATCTTGTTACTGTA+AGG + chr8_4:5734568-5734587 Msa1309240:intron 25.0%
! TTAACAAAAATAGTAACAGG+TGG - chr8_4:5735118-5735137 None:intergenic 25.0%
! AACATTAAAAAATGGCAACA+AGG - chr8_4:5735345-5735364 None:intergenic 25.0%
!! TATCTTATTTAGCAAGGATT+AGG + chr8_4:5735865-5735884 Msa1309240:intron 25.0%
!! ATCTTATTTAGCAAGGATTA+GGG + chr8_4:5735866-5735885 Msa1309240:intron 25.0%
!! ATAGAAAATGAAGTTTTCCT+TGG - chr8_4:5736033-5736052 None:intergenic 25.0%
!! TTAAAGTTTTTCTTTATGGC+AGG + chr8_4:5736201-5736220 Msa1309240:intron 25.0%
!! TTTGAAAAAGTATACGAGAT+TGG + chr8_4:5736232-5736251 Msa1309240:CDS 25.0%
! CAAATCAATTGCATATTTGT+AGG - chr8_4:5736489-5736508 None:intergenic 25.0%
!!! AATTGATTTGTAATGGGAAA+GGG + chr8_4:5736499-5736518 Msa1309240:intron 25.0%
!! CCTGTTTTATATTTGATCTT+GGG - chr8_4:5736597-5736616 None:intergenic 25.0%
! CCAAGATCAAATATAAAACA+GGG + chr8_4:5736595-5736614 Msa1309240:intron 25.0%
!!! AATAACAAATTTGTTGAAGC+GGG + chr8_4:5737068-5737087 Msa1309240:intron 25.0%
! ATCTTGTTAAAGAAATTTCC+GGG + chr8_4:5737158-5737177 Msa1309240:CDS 25.0%
! GTAAAAAATGTTGCCAAAAA+GGG - chr8_4:5737437-5737456 None:intergenic 25.0%
! TGTAAAAAATGTTGCCAAAA+AGG - chr8_4:5737438-5737457 None:intergenic 25.0%
! AAATTTCAACTTCAATGGAA+TGG - chr8_4:5737755-5737774 None:intergenic 25.0%
! ACAGAAAATTTCAACTTCAA+TGG - chr8_4:5737760-5737779 None:intergenic 25.0%
! TAATCAATTCATATTGTTCC+TGG + chr8_4:5737827-5737846 Msa1309240:intron 25.0%
! AACAAAAAAGTAGTGAACAA+TGG - chr8_4:5737863-5737882 None:intergenic 25.0%
! AAAAGAAGGAATAGAAAATG+AGG + chr8_4:5738473-5738492 Msa1309240:CDS 25.0%
! TAAATGAAGGTTAAAAGGAA+GGG - chr8_4:5738620-5738639 None:intergenic 25.0%
! CTTAGTAAATGAAGGTTAAA+AGG - chr8_4:5738625-5738644 None:intergenic 25.0%
! TGAATTATTTGTATACCACA+TGG + chr8_4:5738870-5738889 Msa1309240:three_prime_UTR 25.0%
!!! TCTTGGCTTAATTATTTTGA+TGG + chr8_4:5738959-5738978 Msa1309240:three_prime_UTR 25.0%
GATAGAAAGGAAAAAAATGG+TGG + chr8_4:5728501-5728520 Msa1309240:exon 30.0%
TCACTGTATAACTTCAATTG+TGG + chr8_4:5728780-5728799 Msa1309240:intron 30.0%
CTTGAAACCAAAAACTAACT+AGG - chr8_4:5728834-5728853 None:intergenic 30.0%
! TTCTACACAAATGTGGTTTT+TGG - chr8_4:5729053-5729072 None:intergenic 30.0%
! CTTGATTGTTGTTGTTATGA+TGG + chr8_4:5729172-5729191 Msa1309240:intron 30.0%
! TAAAATATGTCAGCCCTTTT+AGG + chr8_4:5729213-5729232 Msa1309240:intron 30.0%
CTATTAGTGTCAACATGTTT+GGG - chr8_4:5729296-5729315 None:intergenic 30.0%
ACTATTAGTGTCAACATGTT+TGG - chr8_4:5729297-5729316 None:intergenic 30.0%
ATCGACACATGTTATTACTT+TGG - chr8_4:5729341-5729360 None:intergenic 30.0%
AGTCCCAAAGAATGATAATT+GGG - chr8_4:5729652-5729671 None:intergenic 30.0%
TAGTCCCAAAGAATGATAAT+TGG - chr8_4:5729653-5729672 None:intergenic 30.0%
! ATGTTGTTGGTAGATTCTAA+TGG + chr8_4:5730134-5730153 Msa1309240:intron 30.0%
! ATGTTGTTGGTAGATTCTAA+CGG + chr8_4:5730134-5730153 Msa1309240:intron 30.0%
! TTGAAGGCATATGTTGATAT+TGG + chr8_4:5730268-5730287 Msa1309240:CDS 30.0%
! GTTGATATTGGTGATATACT+AGG + chr8_4:5730280-5730299 Msa1309240:CDS 30.0%
ACAATTAAACGCACAGAAAA+AGG + chr8_4:5730313-5730332 Msa1309240:CDS 30.0%
!! AAAAGGTATTACCTAGGAAT+TGG + chr8_4:5730330-5730349 Msa1309240:intron 30.0%
!!! TACCTAGGAATTGGTTTTTT+CGG + chr8_4:5730339-5730358 Msa1309240:intron 30.0%
! TATCTTAGTGATGAGAGTTT+TGG + chr8_4:5730615-5730634 Msa1309240:intron 30.0%
! ATCTTAGTGATGAGAGTTTT+GGG + chr8_4:5730616-5730635 Msa1309240:intron 30.0%
ACTTGAACTAGTTACGATAA+TGG + chr8_4:5730938-5730957 Msa1309240:intron 30.0%
!! GTCTGGGTTTTTAATTGATT+AGG + chr8_4:5731135-5731154 Msa1309240:intron 30.0%
GTACCCAAAAAAAACAAACA+TGG - chr8_4:5731181-5731200 None:intergenic 30.0%
!!! TTTTTTGGGTACAATAAGCT+AGG + chr8_4:5731189-5731208 Msa1309240:intron 30.0%
! TGTTGAATTTGCATTTTCCA+AGG + chr8_4:5731318-5731337 Msa1309240:intron 30.0%
! TGTTGAATTTGCATTTTCCA+AGG + chr8_4:5731318-5731337 Msa1309240:intron 30.0%
! TTTTCTTCTTTTTGTGCCTT+TGG + chr8_4:5731944-5731963 Msa1309240:intron 30.0%
TCAAATATAGAATCGTGAAG+AGG + chr8_4:5731982-5732001 Msa1309240:intron 30.0%
!!! GTTTTTGAGTTGTATATCCT+TGG - chr8_4:5732148-5732167 None:intergenic 30.0%
AATATCACTTGCCTATTATC+TGG + chr8_4:5732183-5732202 Msa1309240:intron 30.0%
ATATCACTTGCCTATTATCT+GGG + chr8_4:5732184-5732203 Msa1309240:intron 30.0%
TGAATGAGGACAAATTAAGT+TGG + chr8_4:5732322-5732341 Msa1309240:intron 30.0%
AAGATTAACTGTACTCAATG+AGG + chr8_4:5732345-5732364 Msa1309240:intron 30.0%
AGATTAACTGTACTCAATGA+GGG + chr8_4:5732346-5732365 Msa1309240:intron 30.0%
TACAATACACCAAAAATGGT+GGG + chr8_4:5732470-5732489 Msa1309240:intron 30.0%
AAAAAAAAAAAAGGGCAACC+CGG - chr8_4:5732536-5732555 None:intergenic 30.0%
TACAGTCTGTAAAAAGTGAA+AGG - chr8_4:5732663-5732682 None:intergenic 30.0%
! TCAAAAAGTGCAAAAATAGG+GGG + chr8_4:5732695-5732714 Msa1309240:intron 30.0%
CAATAAATAACATGAGAAGG+TGG - chr8_4:5732756-5732775 None:intergenic 30.0%
CAGCAATGATAACAAGTAAA+AGG - chr8_4:5732927-5732946 None:intergenic 30.0%
TGAAAATACAAGATTCTCCT+TGG + chr8_4:5733174-5733193 Msa1309240:intron 30.0%
CTCTCTTCTTTCATTCTTTA+CGG + chr8_4:5733252-5733271 Msa1309240:intron 30.0%
AGAGAAGATTTAATGAAGAG+AGG - chr8_4:5733319-5733338 None:intergenic 30.0%
!! TTGAGAGAAGATGCTTTTTA+GGG - chr8_4:5733361-5733380 None:intergenic 30.0%
!! TTTGAGAGAAGATGCTTTTT+AGG - chr8_4:5733362-5733381 None:intergenic 30.0%
!!! CTTTCTTACTTTTTCATCTC+TGG + chr8_4:5733610-5733629 Msa1309240:intron 30.0%
ACGTTAAAAAGAATGACAGA+TGG - chr8_4:5733646-5733665 None:intergenic 30.0%
CACCCTAATTAAAAACTTGA+AGG - chr8_4:5734273-5734292 None:intergenic 30.0%
GAATGTATTTGGTCATCAAT+AGG + chr8_4:5734383-5734402 Msa1309240:intron 30.0%
GCTTGTATGCTGTTAATTAA+CGG + chr8_4:5734603-5734622 Msa1309240:intron 30.0%
TATAGGTTGTATCAGAGATA+CGG + chr8_4:5734764-5734783 Msa1309240:intron 30.0%
!!! GATATTTTAACAGGCTAGTT+TGG + chr8_4:5734982-5735001 Msa1309240:intron 30.0%
CTTGAAAGTCAGATTGATAT+AGG + chr8_4:5735061-5735080 Msa1309240:intron 30.0%
AAAACAATGAAGGCAAAAAG+AGG - chr8_4:5735210-5735229 None:intergenic 30.0%
GAGTCAAACAAAAACAATGA+AGG - chr8_4:5735220-5735239 None:intergenic 30.0%
!!! ATTGTTTTTGTTTGACTCCT+TGG + chr8_4:5735222-5735241 Msa1309240:intron 30.0%
TGTGAGCGAACATTAAAAAA+TGG - chr8_4:5735353-5735372 None:intergenic 30.0%
TAATTGCATTGCTCAATAGA+AGG - chr8_4:5735428-5735447 None:intergenic 30.0%
GTGAATCTGGAAACATTATA+TGG - chr8_4:5735535-5735554 None:intergenic 30.0%
TTAAATGCAAGGAAATGTTG+AGG + chr8_4:5735828-5735847 Msa1309240:intron 30.0%
! AAAATGAAGTTTTCCTTGGA+AGG - chr8_4:5736029-5736048 None:intergenic 30.0%
! ATAGAGAACTTCACTTGTTT+TGG + chr8_4:5736069-5736088 Msa1309240:intron 30.0%
!! ACACAGGTTTTTCAAAAAGT+TGG - chr8_4:5736098-5736117 None:intergenic 30.0%
CAATCTCAAACTATTACTAG+AGG - chr8_4:5736137-5736156 None:intergenic 30.0%
GGTCGAATATTTAGAAATGA+AGG + chr8_4:5736253-5736272 Msa1309240:CDS 30.0%
AATATCAACTCGTCATAATC+CGG + chr8_4:5736276-5736295 Msa1309240:CDS 30.0%
ACCTCTATAGTTGTAAATTC+CGG - chr8_4:5736298-5736317 None:intergenic 30.0%
!! CAATTGATTTGTAATGGGAA+AGG + chr8_4:5736498-5736517 Msa1309240:intron 30.0%
CCCAAGATCAAATATAAAAC+AGG + chr8_4:5736594-5736613 Msa1309240:intron 30.0%
! CCCTGTTTTATATTTGATCT+TGG - chr8_4:5736598-5736617 None:intergenic 30.0%
AATATAAAACAGGGTTGTTC+AGG + chr8_4:5736604-5736623 Msa1309240:intron 30.0%
GATTTGAAAAAGTTTCACGA+CGG - chr8_4:5736648-5736667 None:intergenic 30.0%
!! GACAATTGTTGATTCACATT+AGG - chr8_4:5736670-5736689 None:intergenic 30.0%
!!! GTTAGTTTTAGTACTTGAGA+CGG + chr8_4:5736716-5736735 Msa1309240:intron 30.0%
!!! TTAGTTTTAGTACTTGAGAC+GGG + chr8_4:5736717-5736736 Msa1309240:intron 30.0%
! AAAGCTTACTGTTGATTATC+AGG + chr8_4:5736986-5737005 Msa1309240:CDS 30.0%
! TAGAAGACTGTTGAAGTTTT+AGG - chr8_4:5737031-5737050 None:intergenic 30.0%
TTCTTTAACAAGATTGTGCA+TGG - chr8_4:5737152-5737171 None:intergenic 30.0%
GTTATCAAGATTCTTTCCAA+GGG - chr8_4:5737242-5737261 None:intergenic 30.0%
TGTTATCAAGATTCTTTCCA+AGG - chr8_4:5737243-5737262 None:intergenic 30.0%
! TGGAAAGAATCTTGATAACA+AGG + chr8_4:5737243-5737262 Msa1309240:CDS 30.0%
! TACATATTGACATCCCTTTT+TGG + chr8_4:5737421-5737440 Msa1309240:intron 30.0%
! AGTCTAAAACAAATGTAGGT+TGG - chr8_4:5737553-5737572 None:intergenic 30.0%
! GTCTAAAATGTATATACCTG+CGG - chr8_4:5737610-5737629 None:intergenic 30.0%
TGTATGGTACTTTCTACTTT+AGG - chr8_4:5737693-5737712 None:intergenic 30.0%
!! GTAGAAAGTACCATACAATT+TGG + chr8_4:5737696-5737715 Msa1309240:intron 30.0%
TGTAAGAGATCCAAATTGTA+TGG - chr8_4:5737709-5737728 None:intergenic 30.0%
! AGGTTTGAACTTTTCATTTG+TGG + chr8_4:5737958-5737977 Msa1309240:CDS 30.0%
! TTGAACTTTTCATTTGTGGT+CGG + chr8_4:5737962-5737981 Msa1309240:CDS 30.0%
!!! AACACATCGTTTTTAGTTTG+TGG - chr8_4:5738088-5738107 None:intergenic 30.0%
ATTTCTCATCGTATACAACA+TGG + chr8_4:5738119-5738138 Msa1309240:intron 30.0%
TTTCTCATCGTATACAACAT+GGG + chr8_4:5738120-5738139 Msa1309240:intron 30.0%
AAAAAGAAAAAAACCCTGGT+AGG + chr8_4:5738143-5738162 Msa1309240:intron 30.0%
CTTATATTCATTTCCTACCA+GGG - chr8_4:5738159-5738178 None:intergenic 30.0%
TCTTATATTCATTTCCTACC+AGG - chr8_4:5738160-5738179 None:intergenic 30.0%
TAACACCTTAACAAGATAGA+TGG + chr8_4:5738278-5738297 Msa1309240:intron 30.0%
!!! TGGTTGCATTTTTTTTTACC+TGG + chr8_4:5738376-5738395 Msa1309240:intron 30.0%
GTTGTCTAATTTGATCTTCT+AGG - chr8_4:5738413-5738432 None:intergenic 30.0%
ACAAATGGTGGTAAAAAAGA+AGG + chr8_4:5738459-5738478 Msa1309240:CDS 30.0%
AAATGAAGGTTAAAAGGAAG+GGG - chr8_4:5738619-5738638 None:intergenic 30.0%
GTAAATGAAGGTTAAAAGGA+AGG - chr8_4:5738621-5738640 None:intergenic 30.0%
ACTAAGATTACATTCTTTCC+AGG + chr8_4:5738639-5738658 Msa1309240:intron 30.0%
CTAAGATTACATTCTTTCCA+GGG + chr8_4:5738640-5738659 Msa1309240:intron 30.0%
AACAAAACTGTCCTTATTGT+TGG - chr8_4:5738747-5738766 None:intergenic 30.0%
ATGCTTAATCAAATTCCATG+TGG - chr8_4:5738888-5738907 None:intergenic 30.0%
!! AAAGAGCATCATGAATTCAA+AGG + chr8_4:5738928-5738947 Msa1309240:three_prime_UTR 30.0%
ATTCAAAGGTTATCTTGTCT+TGG + chr8_4:5738942-5738961 Msa1309240:three_prime_UTR 30.0%
!!! ATTATTTTGATGGTTCCTCT+AGG + chr8_4:5738969-5738988 Msa1309240:three_prime_UTR 30.0%
CTGATACTCGATAGATAGAA+AGG + chr8_4:5728488-5728507 Msa1309240:five_prime_UTR 35.0%
AGAAAGGAAAAAAATGGTGG+AGG + chr8_4:5728504-5728523 Msa1309240:exon 35.0%
TGAAACTGTTGAACCTAACA+TGG + chr8_4:5728530-5728549 Msa1309240:CDS 35.0%
AAATACACTCAATCAGAGCA+AGG - chr8_4:5728736-5728755 None:intergenic 35.0%
GCAATGTAGGAGCAAAAATA+CGG - chr8_4:5728889-5728908 None:intergenic 35.0%
! TACTAGCTTCTACACAAATG+TGG - chr8_4:5729060-5729079 None:intergenic 35.0%
GAAGATAGACAAAATCGCAT+CGG + chr8_4:5729083-5729102 Msa1309240:intron 35.0%
AAGATAGACAAAATCGCATC+GGG + chr8_4:5729084-5729103 Msa1309240:intron 35.0%
AAACCAAACACACACTTAGT+GGG + chr8_4:5729143-5729162 Msa1309240:intron 35.0%
! GATTGTTGTTGTTATGATGG+TGG + chr8_4:5729175-5729194 Msa1309240:intron 35.0%
! GTAATAACATGTGTCGATGT+CGG + chr8_4:5729343-5729362 Msa1309240:intron 35.0%
!! GCTGTTTTCATAAGCTATTC+TGG + chr8_4:5729512-5729531 Msa1309240:intron 35.0%
TATCCTATGGGCATGTTAAT+AGG + chr8_4:5729560-5729579 Msa1309240:intron 35.0%
GTCCCAAAGAATGATAATTG+GGG - chr8_4:5729651-5729670 None:intergenic 35.0%
GTTGAAGAACTTAGAAGCAA+GGG + chr8_4:5729836-5729855 Msa1309240:CDS 35.0%
TTGAAGAACTTAGAAGCAAG+GGG + chr8_4:5729837-5729856 Msa1309240:CDS 35.0%
TTGTTCCACTCATAAGCATA+GGG - chr8_4:5729869-5729888 None:intergenic 35.0%
TTTGTTCCACTCATAAGCAT+AGG - chr8_4:5729870-5729889 None:intergenic 35.0%
GACTGATCATGTATCTATTG+CGG + chr8_4:5729958-5729977 Msa1309240:CDS 35.0%
ACTGATCATGTATCTATTGC+GGG + chr8_4:5729959-5729978 Msa1309240:CDS 35.0%
ATCGTCTCTTAGTGTCAAAA+AGG - chr8_4:5730020-5730039 None:intergenic 35.0%
!! CACAGAAAAAGGTATTACCT+AGG + chr8_4:5730324-5730343 Msa1309240:intron 35.0%
TACCGAAAAAACCAATTCCT+AGG - chr8_4:5730344-5730363 None:intergenic 35.0%
!!! GACTTCGTTTTTTTACATGG+CGG - chr8_4:5730454-5730473 None:intergenic 35.0%
!!! CCAGACTTCGTTTTTTTACA+TGG - chr8_4:5730457-5730476 None:intergenic 35.0%
CCATGTAAAAAAACGAAGTC+TGG + chr8_4:5730454-5730473 Msa1309240:intron 35.0%
AGCAAAGTAAACAAAGGCAA+AGG - chr8_4:5731085-5731104 None:intergenic 35.0%
! TTACTTTGCTCTCGACTTTT+TGG + chr8_4:5731095-5731114 Msa1309240:intron 35.0%
GATATGGGATCTTAACTGAT+TGG - chr8_4:5731215-5731234 None:intergenic 35.0%
ATCAGTTAAGATCCCATATC+TGG + chr8_4:5731215-5731234 Msa1309240:intron 35.0%
CTGAGAAACAAGATTCTCAA+AGG - chr8_4:5731596-5731615 None:intergenic 35.0%
! AAGATCCATTTGGGCTTTAA+GGG - chr8_4:5731852-5731871 None:intergenic 35.0%
TCTTAACCTCTTGTGAAAGT+TGG + chr8_4:5731907-5731926 Msa1309240:intron 35.0%
ACATTGAATTCACCAATCCA+AGG + chr8_4:5732128-5732147 Msa1309240:intron 35.0%
TGAGTTGTATATCCTTGGAT+TGG - chr8_4:5732143-5732162 None:intergenic 35.0%
! GAGTGGATTTCTAGATTTCT+TGG - chr8_4:5732299-5732318 None:intergenic 35.0%
GAAATCCACTCTAATGAATG+AGG + chr8_4:5732308-5732327 Msa1309240:intron 35.0%
TTTGTCCTCATTCATTAGAG+TGG - chr8_4:5732316-5732335 None:intergenic 35.0%
GATTAACTGTACTCAATGAG+GGG + chr8_4:5732347-5732366 Msa1309240:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr8_4:5732388-5732407 Msa1309240:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr8_4:5732443-5732462 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr8_4:5732442-5732461 Msa1309240:intron 35.0%
TGCGTACAATACACCAAAAA+TGG + chr8_4:5732466-5732485 Msa1309240:intron 35.0%
GTACAATACACCAAAAATGG+TGG + chr8_4:5732469-5732488 Msa1309240:intron 35.0%
!! ATGTTTGACTTGCATCTTTG+TGG + chr8_4:5732574-5732593 Msa1309240:intron 35.0%
! CAAAAAGTGCAAAAATAGGG+GGG + chr8_4:5732696-5732715 Msa1309240:intron 35.0%
! GTGGAAGCAAAGATTTTGTA+AGG - chr8_4:5732820-5732839 None:intergenic 35.0%
GGGACACAAATACAATATTG+AGG - chr8_4:5732906-5732925 None:intergenic 35.0%
! TATCCCGCTATAGCATTTTT+GGG + chr8_4:5733469-5733488 Msa1309240:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG - chr8_4:5733510-5733529 None:intergenic 35.0%
CTATCCAAATTTCAGTCCAA+GGG - chr8_4:5733767-5733786 None:intergenic 35.0%
AGATATGATTGCAAATCCAG+AGG + chr8_4:5733840-5733859 Msa1309240:CDS 35.0%
! AGAAACTGCTAGACATTTTC+TGG - chr8_4:5734083-5734102 None:intergenic 35.0%
TAATAGCAAAGATTTAGCGC+AGG - chr8_4:5734241-5734260 None:intergenic 35.0%
GGTATGTGCTAATTACCTTT+GGG + chr8_4:5734510-5734529 Msa1309240:intron 35.0%
AAGAAGATAATGTGAGGCTA+CGG - chr8_4:5734652-5734671 None:intergenic 35.0%
ACAGATAGTAGCTAAATGCT+TGG - chr8_4:5734718-5734737 None:intergenic 35.0%
CTACAAAGACAAAACTGTGT+AGG - chr8_4:5734861-5734880 None:intergenic 35.0%
!! CTACACAGTTTTGTCTTTGT+AGG + chr8_4:5734859-5734878 Msa1309240:intron 35.0%
! TTTGTAGGAGAAGTACATGT+AGG + chr8_4:5734874-5734893 Msa1309240:intron 35.0%
! TTGTAGGAGAAGTACATGTA+GGG + chr8_4:5734875-5734894 Msa1309240:intron 35.0%
!!! TTTTAACAGGCTAGTTTGGT+AGG + chr8_4:5734986-5735005 Msa1309240:intron 35.0%
CATATTTATGCATTGCTCTC+TGG + chr8_4:5735034-5735053 Msa1309240:intron 35.0%
!! GTAGTAAATTGGTAATGCCA+AGG - chr8_4:5735242-5735261 None:intergenic 35.0%
TTGTCAAAGCTGTAACTAGA+TGG + chr8_4:5735456-5735475 Msa1309240:intron 35.0%
TATACAGTACTTCGTTCCTA+AGG - chr8_4:5735482-5735501 None:intergenic 35.0%
!! GAACGAAGTACTGTATAACT+AGG + chr8_4:5735485-5735504 Msa1309240:intron 35.0%
ATGGATATTCAGAGTGAATC+TGG - chr8_4:5735548-5735567 None:intergenic 35.0%
! ATACACTTGCATTTTGCACA+TGG + chr8_4:5735578-5735597 Msa1309240:intron 35.0%
TGCTATATTCATCACGAGTA+AGG + chr8_4:5735895-5735914 Msa1309240:intron 35.0%
AAAAACCTGTGTCTTGATCA+CGG + chr8_4:5736106-5736125 Msa1309240:intron 35.0%
! AAGTTTTTCTTTATGGCAGG+TGG + chr8_4:5736204-5736223 Msa1309240:intron 35.0%
! AGTTTTTCTTTATGGCAGGT+GGG + chr8_4:5736205-5736224 Msa1309240:intron 35.0%
TCCGGAATTTACAACTATAG+AGG + chr8_4:5736294-5736313 Msa1309240:CDS 35.0%
! ATTAGTCTCTTGCAAATGCA+AGG + chr8_4:5736455-5736474 Msa1309240:intron 35.0%
TGGCAACAAAGCATAAAAGA+GGG - chr8_4:5736557-5736576 None:intergenic 35.0%
TTGGCAACAAAGCATAAAAG+AGG - chr8_4:5736558-5736577 None:intergenic 35.0%
GGGATTAGATATGTGAAGAT+TGG - chr8_4:5736577-5736596 None:intergenic 35.0%
CTGCTAAATTCATCATGCTT+TGG - chr8_4:5736929-5736948 None:intergenic 35.0%
AAGCATGATGAATTTAGCAG+AGG + chr8_4:5736929-5736948 Msa1309240:CDS 35.0%
GAGTTGAGATATGTTTGGAA+AGG + chr8_4:5737110-5737129 Msa1309240:CDS 35.0%
CAATTCATTGAAATCGATCC+CGG - chr8_4:5737179-5737198 None:intergenic 35.0%
! GGGATCGATTTCAATGAATT+GGG + chr8_4:5737178-5737197 Msa1309240:CDS 35.0%
! GGGTAGTCTAAAACAAATGT+AGG - chr8_4:5737557-5737576 None:intergenic 35.0%
CCAATGGAGATATCTCAATT+GGG - chr8_4:5737577-5737596 None:intergenic 35.0%
! ACTTTTGCGATGAAAACAAG+GGG - chr8_4:5737798-5737817 None:intergenic 35.0%
! GACTTTTGCGATGAAAACAA+GGG - chr8_4:5737799-5737818 None:intergenic 35.0%
! TGACTTTTGCGATGAAAACA+AGG - chr8_4:5737800-5737819 None:intergenic 35.0%
AACAATGGTGATCAAAATCC+AGG - chr8_4:5737848-5737867 None:intergenic 35.0%
! TGAACTTTTCATTTGTGGTC+GGG + chr8_4:5737963-5737982 Msa1309240:CDS 35.0%
ATTGACTGATCCTATAGATC+AGG + chr8_4:5738008-5738027 Msa1309240:CDS 35.0%
! CTTCCAAACTTTTCACATTC+AGG + chr8_4:5738035-5738054 Msa1309240:intron 35.0%
ATGCCTGAATGTGAAAAGTT+TGG - chr8_4:5738041-5738060 None:intergenic 35.0%
TGGGAAAAAGAAAAAAACCC+TGG + chr8_4:5738139-5738158 Msa1309240:intron 35.0%
TAGTTTGACGGTGAACAAAA+TGG + chr8_4:5738356-5738375 Msa1309240:intron 35.0%
AAAGCAGCTCTTTCAACAAA+TGG + chr8_4:5738444-5738463 Msa1309240:CDS 35.0%
TCTTGACGATGATTTCCTAA+CGG + chr8_4:5738515-5738534 Msa1309240:CDS 35.0%
TCTGTTTGCATGTCTTTGTT+TGG + chr8_4:5738581-5738600 Msa1309240:intron 35.0%
AATGAAGGTTAAAAGGAAGG+GGG - chr8_4:5738618-5738637 None:intergenic 35.0%
GCTATTACATCTCTAATGCT+GGG - chr8_4:5738706-5738725 None:intergenic 35.0%
TCATGATGCTCTTTCAACTA+AGG - chr8_4:5738922-5738941 None:intergenic 35.0%
TGGTTTATTCTCGTAAGCGA+AGG + chr8_4:5728457-5728476 Msa1309240:five_prime_UTR 40.0%
TCATCAAAGGGTTCCATGTT+AGG - chr8_4:5728546-5728565 None:intergenic 40.0%
TTGAATAAGAAGAAGAGGCG+CGG - chr8_4:5728615-5728634 None:intergenic 40.0%
GGTGGTTGAATAAGAAGAAG+AGG - chr8_4:5728620-5728639 None:intergenic 40.0%
CGTGAGTTTGATCAAAAGTG+CGG + chr8_4:5729027-5729046 Msa1309240:intron 40.0%
GTGCGTTTGTGTGTTGTAAA+CGG + chr8_4:5729119-5729138 Msa1309240:intron 40.0%
TGCGTTTGTGTGTTGTAAAC+GGG + chr8_4:5729120-5729139 Msa1309240:intron 40.0%
GAAACCAAACACACACTTAG+TGG + chr8_4:5729142-5729161 Msa1309240:intron 40.0%
CTTATGGTCGAATGTGTATC+CGG - chr8_4:5729372-5729391 None:intergenic 40.0%
ACACATTCGACCATAAGTGT+CGG + chr8_4:5729375-5729394 Msa1309240:intron 40.0%
!! AATAGTAGCACCGACACTTA+TGG - chr8_4:5729388-5729407 None:intergenic 40.0%
! GTGCTACTATTAAGCGCTTA+TGG + chr8_4:5729397-5729416 Msa1309240:intron 40.0%
AGGCCCCAATTATCATTCTT+TGG + chr8_4:5729645-5729664 Msa1309240:intron 40.0%
GGCCCCAATTATCATTCTTT+GGG + chr8_4:5729646-5729665 Msa1309240:intron 40.0%
!! TATCATTCTTTGGGACTAGC+TGG + chr8_4:5729655-5729674 Msa1309240:intron 40.0%
GCTGGAACTTTCTCTGATTA+TGG + chr8_4:5729673-5729692 Msa1309240:intron 40.0%
GGTTGAAGAACTTAGAAGCA+AGG + chr8_4:5729835-5729854 Msa1309240:intron 40.0%
TTGATCCCTATGCTTATGAG+TGG + chr8_4:5729861-5729880 Msa1309240:CDS 40.0%
!! ATTGTTGCTAGGAGAGCATT+TGG + chr8_4:5729986-5730005 Msa1309240:CDS 40.0%
TTGACACTAAGAGACGATTC+AGG + chr8_4:5730022-5730041 Msa1309240:CDS 40.0%
TGACACTAAGAGACGATTCA+GGG + chr8_4:5730023-5730042 Msa1309240:CDS 40.0%
GTTTCAGCTCTATTGCGAAA+AGG + chr8_4:5730219-5730238 Msa1309240:intron 40.0%
TGATCAGTTTGAGCAGTTGA+AGG + chr8_4:5730252-5730271 Msa1309240:CDS 40.0%
GCGGTAACACAAAAATCAGA+TGG - chr8_4:5730435-5730454 None:intergenic 40.0%
GTCGAGAGCAAAGTAAACAA+AGG - chr8_4:5731091-5731110 None:intergenic 40.0%
TTTGGCAGTTCCTTGTATGT+TGG + chr8_4:5731113-5731132 Msa1309240:intron 40.0%
! AGTTCCTTGTATGTTGGTCT+GGG + chr8_4:5731119-5731138 Msa1309240:intron 40.0%
AAAACCCAGACCAACATACA+AGG - chr8_4:5731126-5731145 None:intergenic 40.0%
AGTTAAGATCCCATATCTGG+AGG + chr8_4:5731218-5731237 Msa1309240:intron 40.0%
GTTAAGATCCCATATCTGGA+GGG + chr8_4:5731219-5731238 Msa1309240:intron 40.0%
GCTGATCATTAAGCCAGTTA+TGG - chr8_4:5731272-5731291 None:intergenic 40.0%
CATTAGCTCCAAAATACCCA+TGG + chr8_4:5731347-5731366 Msa1309240:intron 40.0%
TCATTAAGCCAAGTTGCCAT+GGG - chr8_4:5731366-5731385 None:intergenic 40.0%
ATCATTAAGCCAAGTTGCCA+TGG - chr8_4:5731367-5731386 None:intergenic 40.0%
CATAAGCTCCAAAATCTCCA+TGG + chr8_4:5731447-5731466 Msa1309240:intron 40.0%
! TCATGTTGCCATGGAGATTT+TGG - chr8_4:5731458-5731477 None:intergenic 40.0%
GTTCAAAGAGACCCAGTTAT+TGG - chr8_4:5731496-5731515 None:intergenic 40.0%
! CGAGACAGATAGTCTTAATG+TGG - chr8_4:5731526-5731545 None:intergenic 40.0%
TAAGACTATCTGTCTCGCAA+AGG + chr8_4:5731529-5731548 Msa1309240:intron 40.0%
TCAAAGGTTAATTGAAGCCC+GGG - chr8_4:5731580-5731599 None:intergenic 40.0%
CTCAAAGGTTAATTGAAGCC+CGG - chr8_4:5731581-5731600 None:intergenic 40.0%
TCTTCAGTTGCAGCAATACT+AGG - chr8_4:5731753-5731772 None:intergenic 40.0%
GTATTGCTGCAACTGAAGAT+TGG + chr8_4:5731754-5731773 Msa1309240:intron 40.0%
CAAGATCCATTTGGGCTTTA+AGG - chr8_4:5731853-5731872 None:intergenic 40.0%
CAACAACCAACTTTCACAAG+AGG - chr8_4:5731916-5731935 None:intergenic 40.0%
CACTCAAAGTGAGTTACTTC+TGG - chr8_4:5732083-5732102 None:intergenic 40.0%
CAGAAGTAACTCACTTTGAG+TGG + chr8_4:5732081-5732100 Msa1309240:intron 40.0%
! AATAAGGTATCTCCCTAGAC+TGG - chr8_4:5732215-5732234 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr8_4:5732436-5732455 Msa1309240:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr8_4:5732437-5732456 Msa1309240:intron 40.0%
CCACTTCCTGACAAATATCA+CGG + chr8_4:5732836-5732855 Msa1309240:CDS 40.0%
GTTAGACCGTGATATTTGTC+AGG - chr8_4:5732845-5732864 None:intergenic 40.0%
AAAACCACTATGCAGTGTTG+CGG - chr8_4:5733125-5733144 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG + chr8_4:5733468-5733487 Msa1309240:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + chr8_4:5733470-5733489 Msa1309240:intron 40.0%
GAGATGCTGTAGGAATATGA+AGG - chr8_4:5733729-5733748 None:intergenic 40.0%
GCTATCCAAATTTCAGTCCA+AGG - chr8_4:5733768-5733787 None:intergenic 40.0%
!! TCATGTTTGCTGTCTACTTG+TGG + chr8_4:5733807-5733826 Msa1309240:intron 40.0%
! TTTGCTGTCTACTTGTGGTT+AGG + chr8_4:5733812-5733831 Msa1309240:intron 40.0%
!! AAACTACCTTGGCTCTTTTG+CGG - chr8_4:5733879-5733898 None:intergenic 40.0%
TGAGGTTGAGATATATGGCA+TGG - chr8_4:5734203-5734222 None:intergenic 40.0%
GGGTATGTGCTAATTACCTT+TGG + chr8_4:5734509-5734528 Msa1309240:intron 40.0%
ATTGCAACTTCAAAGCCCAA+AGG - chr8_4:5734528-5734547 None:intergenic 40.0%
CAGCAGAAGAAGATAATGTG+AGG - chr8_4:5734658-5734677 None:intergenic 40.0%
AGTAGCTAAATGCTTGGTCA+TGG - chr8_4:5734712-5734731 None:intergenic 40.0%
! GGATTCTTTAGGTTTCGTTG+AGG + chr8_4:5734795-5734814 Msa1309240:CDS 40.0%
AATCCACAAACCTGCAAAAC+TGG - chr8_4:5734829-5734848 None:intergenic 40.0%
!! CGAAGTACTGTATAACTAGG+CGG + chr8_4:5735488-5735507 Msa1309240:intron 40.0%
!! GAAGTACTGTATAACTAGGC+GGG + chr8_4:5735489-5735508 Msa1309240:intron 40.0%
CTCTGAATATCCATATACCG+TGG + chr8_4:5735554-5735573 Msa1309240:intron 40.0%
CAAAATGCAAGTGTATGCCA+CGG - chr8_4:5735574-5735593 None:intergenic 40.0%
! TTCATTGATTAGGGAGAAGC+TGG + chr8_4:5735624-5735643 Msa1309240:intron 40.0%
GAATTGTGGTATGTCACGAA+TGG - chr8_4:5735666-5735685 None:intergenic 40.0%
GTGACATACCACAATTCTCT+TGG + chr8_4:5735669-5735688 Msa1309240:CDS 40.0%
AGTCTCTTCCAAGAGAATTG+TGG - chr8_4:5735680-5735699 None:intergenic 40.0%
ATTGCACCTAAAGAGAATGC+TGG + chr8_4:5735722-5735741 Msa1309240:CDS 40.0%
ATCTCACCAGCATTCTCTTT+AGG - chr8_4:5735731-5735750 None:intergenic 40.0%
! TTTTCCTTGGAAGGAAAGGA+TGG - chr8_4:5736020-5736039 None:intergenic 40.0%
! GAAGTTTTCCTTGGAAGGAA+AGG - chr8_4:5736024-5736043 None:intergenic 40.0%
AAAACCTGTGTCTTGATCAC+GGG + chr8_4:5736107-5736126 Msa1309240:intron 40.0%
!!! GTTATTTTGGATATCACGCG+TGG + chr8_4:5736377-5736396 Msa1309240:intron 40.0%
AAAAGTTTCACGACGGTTGT+TGG - chr8_4:5736641-5736660 None:intergenic 40.0%
CCTAAGCCATGAAAAGTTAG+GGG - chr8_4:5736761-5736780 None:intergenic 40.0%
GCCTAAGCCATGAAAAGTTA+GGG - chr8_4:5736762-5736781 None:intergenic 40.0%
AGCCTAAGCCATGAAAAGTT+AGG - chr8_4:5736763-5736782 None:intergenic 40.0%
ACATATCTCAACTCCCTGTA+CGG - chr8_4:5737104-5737123 None:intergenic 40.0%
ACAGGGAGTTGAGATATGTT+TGG + chr8_4:5737105-5737124 Msa1309240:intron 40.0%
! CGGGATCGATTTCAATGAAT+TGG + chr8_4:5737177-5737196 Msa1309240:CDS 40.0%
TGAATTGGGAAATGATCTCG+AGG + chr8_4:5737192-5737211 Msa1309240:CDS 40.0%
AATCAACCTCGTTAAGTAGG+TGG - chr8_4:5737303-5737322 None:intergenic 40.0%
! ACCTACTTAACGAGGTTGAT+TGG + chr8_4:5737302-5737321 Msa1309240:intron 40.0%
! AATGTAGGTTGGATGAGCTT+TGG - chr8_4:5737542-5737561 None:intergenic 40.0%
CCCAATTGAGATATCTCCAT+TGG + chr8_4:5737574-5737593 Msa1309240:CDS 40.0%
GCCAATGGAGATATCTCAAT+TGG - chr8_4:5737578-5737597 None:intergenic 40.0%
AAATGTATATACCTGCGGTG+TGG - chr8_4:5737605-5737624 None:intergenic 40.0%
AGTCAAACCTGTGGATCTAA+TGG - chr8_4:5737935-5737954 None:intergenic 40.0%
TGGAAGCTTACCTGATCTAT+AGG - chr8_4:5738021-5738040 None:intergenic 40.0%
CCATGCCATCTATCTTGTTA+AGG - chr8_4:5738286-5738305 None:intergenic 40.0%
CCTTAACAAGATAGATGGCA+TGG + chr8_4:5738283-5738302 Msa1309240:intron 40.0%
CCAACGTAGCAATAGTTTGA+CGG + chr8_4:5738344-5738363 Msa1309240:intron 40.0%
!!! TTTTTTTTTACCTGGCAGCG+AGG + chr8_4:5738384-5738403 Msa1309240:intron 40.0%
TTATGTACCATTCCAGAAGC+TGG - chr8_4:5738561-5738580 None:intergenic 40.0%
ATGAAGGTTAAAAGGAAGGG+GGG - chr8_4:5738617-5738636 None:intergenic 40.0%
TTACATTCTTTCCAGGGACT+TGG + chr8_4:5738646-5738665 Msa1309240:intron 40.0%
TACATTCTTTCCAGGGACTT+GGG + chr8_4:5738647-5738666 Msa1309240:intron 40.0%
GGCTATTACATCTCTAATGC+TGG - chr8_4:5738707-5738726 None:intergenic 40.0%
ATTGTTGGACCTTGAGTACT+GGG - chr8_4:5738732-5738751 None:intergenic 40.0%
TATTGTTGGACCTTGAGTAC+TGG - chr8_4:5738733-5738752 None:intergenic 40.0%
GTACTCAAGGTCCAACAATA+AGG + chr8_4:5738733-5738752 Msa1309240:CDS 40.0%
!!! AATATTTTGGTGCTCCCACT+TGG + chr8_4:5739001-5739020 Msa1309240:three_prime_UTR 40.0%
TCTTATTCAACCACCTCCTC+CGG + chr8_4:5728625-5728644 Msa1309240:CDS 45.0%
TGTCCCACTAAGTGTGTGTT+TGG - chr8_4:5729149-5729168 None:intergenic 45.0%
GAGCCTATTAACATGCCCAT+AGG - chr8_4:5729566-5729585 None:intergenic 45.0%
TTGCGGGAAGAATTGTTGCT+AGG + chr8_4:5729975-5729994 Msa1309240:CDS 45.0%
AGACGATTCAGGGACAATTC+AGG + chr8_4:5730033-5730052 Msa1309240:CDS 45.0%
GGTGATATACTAGGTGCAAG+AGG + chr8_4:5730289-5730308 Msa1309240:CDS 45.0%
GACAGCGTAAGACTTTCAGT+TGG - chr8_4:5730717-5730736 None:intergenic 45.0%
TGAAAGTCTTACGCTGTCTC+TGG + chr8_4:5730719-5730738 Msa1309240:intron 45.0%
ATAGACGCTAACGCTACACA+AGG - chr8_4:5730864-5730883 None:intergenic 45.0%
GCTGCAGTTACTCTTGCATA+TGG + chr8_4:5730893-5730912 Msa1309240:intron 45.0%
CAGTTCCTTGTATGTTGGTC+TGG + chr8_4:5731118-5731137 Msa1309240:intron 45.0%
AGGAACTACCCTCCAGATAT+GGG - chr8_4:5731230-5731249 None:intergenic 45.0%
ATGGTGAGACCTGGAAGTTT+CGG - chr8_4:5731253-5731272 None:intergenic 45.0%
TGGAGCTAATGAGTTGTCCT+TGG - chr8_4:5731338-5731357 None:intergenic 45.0%
! CCAAGTTGCCATGGGTATTT+TGG - chr8_4:5731358-5731377 None:intergenic 45.0%
CCAAAATACCCATGGCAACT+TGG + chr8_4:5731355-5731374 Msa1309240:intron 45.0%
TGGAGCTTATGAGTTGTCCT+TGG - chr8_4:5731438-5731457 None:intergenic 45.0%
CATGTTTGCTCATGTTGCCA+TGG - chr8_4:5731467-5731486 None:intergenic 45.0%
TGGCAACATGAGCAAACATG+CGG + chr8_4:5731467-5731486 Msa1309240:intron 45.0%
AACATGCGGTAGCCAATAAC+TGG + chr8_4:5731481-5731500 Msa1309240:intron 45.0%
ACATGCGGTAGCCAATAACT+GGG + chr8_4:5731482-5731501 Msa1309240:intron 45.0%
TTGCTGCAACTGAAGATTGG+AGG + chr8_4:5731757-5731776 Msa1309240:intron 45.0%
TTCCACCCTTAAAGCCCAAA+TGG + chr8_4:5731844-5731863 Msa1309240:intron 45.0%
!! ATCCATTTGGGCTTTAAGGG+TGG - chr8_4:5731849-5731868 None:intergenic 45.0%
CCCTAGCACAAGATCCATTT+GGG - chr8_4:5731861-5731880 None:intergenic 45.0%
CCCAAATGGATCTTGTGCTA+GGG + chr8_4:5731858-5731877 Msa1309240:intron 45.0%
CCAAATGGATCTTGTGCTAG+GGG + chr8_4:5731859-5731878 Msa1309240:intron 45.0%
CACTTGCCTATTATCTGGGA+CGG + chr8_4:5732188-5732207 Msa1309240:intron 45.0%
! ACTTGCCTATTATCTGGGAC+GGG + chr8_4:5732189-5732208 Msa1309240:intron 45.0%
TACTCAATGAGGGGTAACCT+TGG + chr8_4:5732356-5732375 Msa1309240:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr8_4:5732392-5732411 Msa1309240:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_4:5732432-5732451 None:intergenic 45.0%
ACATGAGAAGGTGGTAAAGC+TGG - chr8_4:5732747-5732766 None:intergenic 45.0%
CCGTGATATTTGTCAGGAAG+TGG - chr8_4:5732839-5732858 None:intergenic 45.0%
TAGATATACGCTATCGCCAG+AGG + chr8_4:5732870-5732889 Msa1309240:CDS 45.0%
TTGAGGTACAAGCTTACCTC+TGG - chr8_4:5732889-5732908 None:intergenic 45.0%
AGTTAATAGCGGCGCTATAG+CGG + chr8_4:5733011-5733030 Msa1309240:intron 45.0%
TATCTCATAACGCTACGCCT+TGG - chr8_4:5733087-5733106 None:intergenic 45.0%
CAGATGCGTACAGATCTGAA+AGG - chr8_4:5733280-5733299 None:intergenic 45.0%
GACCCCAAAAATGCTATAGC+GGG - chr8_4:5733475-5733494 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG - chr8_4:5733476-5733495 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG + chr8_4:5733474-5733493 Msa1309240:intron 45.0%
CTCACCCTTGGACTGAAATT+TGG + chr8_4:5733760-5733779 Msa1309240:intron 45.0%
GTTGAGATATATGGCATGGC+TGG - chr8_4:5734199-5734218 None:intergenic 45.0%
CTGGGTGAGGTTGAGATATA+TGG - chr8_4:5734208-5734227 None:intergenic 45.0%
AGGTTGTATCAGAGATACGG+AGG + chr8_4:5734767-5734786 Msa1309240:intron 45.0%
ATCAGAGATACGGAGGACAA+TGG + chr8_4:5734774-5734793 Msa1309240:CDS 45.0%
! CGGAGGACAATGGATTCTTT+AGG + chr8_4:5734784-5734803 Msa1309240:CDS 45.0%
! GGTTGAAACTCCAGTTTTGC+AGG + chr8_4:5734816-5734835 Msa1309240:CDS 45.0%
! ACTCCAGTTTTGCAGGTTTG+TGG + chr8_4:5734823-5734842 Msa1309240:intron 45.0%
AGTACATGTAGGGAATCTGC+TGG + chr8_4:5734885-5734904 Msa1309240:intron 45.0%
AAGAGGACGCAAATTGGTCA+AGG - chr8_4:5735193-5735212 None:intergenic 45.0%
GGCAAAAAGAGGACGCAAAT+TGG - chr8_4:5735199-5735218 None:intergenic 45.0%
AGCTGTAACTAGATGGCCTT+AGG + chr8_4:5735463-5735482 Msa1309240:intron 45.0%
CAAGTGTATGCCACGGTATA+TGG - chr8_4:5735567-5735586 None:intergenic 45.0%
ATTGATTAGGGAGAAGCTGG+AGG + chr8_4:5735627-5735646 Msa1309240:intron 45.0%
! TGTCACGAATGGTCTAGCTT+CGG - chr8_4:5735655-5735674 None:intergenic 45.0%
GAATCCATCCTTTCCTTCCA+AGG + chr8_4:5736013-5736032 Msa1309240:intron 45.0%
! TTTTCTTTATGGCAGGTGGG+TGG + chr8_4:5736208-5736227 Msa1309240:intron 45.0%
TTTCTTTATGGCAGGTGGGT+GGG + chr8_4:5736209-5736228 Msa1309240:intron 45.0%
AAGGGTTGTGAATCCCACTA+TGG + chr8_4:5736517-5736536 Msa1309240:intron 45.0%
AACCAAGTGCTTGCCATAGT+GGG - chr8_4:5736533-5736552 None:intergenic 45.0%
! TTCCCTCCCCTAACTTTTCA+TGG + chr8_4:5736752-5736771 Msa1309240:intron 45.0%
AGCCATGAAAAGTTAGGGGA+GGG - chr8_4:5736757-5736776 None:intergenic 45.0%
AAGCCATGAAAAGTTAGGGG+AGG - chr8_4:5736758-5736777 None:intergenic 45.0%
! CCCCTAACTTTTCATGGCTT+AGG + chr8_4:5736758-5736777 Msa1309240:intron 45.0%
GGGTGTAATGATTCCGTACA+GGG + chr8_4:5737088-5737107 Msa1309240:intron 45.0%
AGATATGTTTGGAAAGGCCC+TGG + chr8_4:5737116-5737135 Msa1309240:CDS 45.0%
ATTGAAGCATGCCAATCTGC+CGG + chr8_4:5737277-5737296 Msa1309240:CDS 45.0%
GCCAATCAACCTCGTTAAGT+AGG - chr8_4:5737306-5737325 None:intergenic 45.0%
TGATCCTCCATTAGATCCAC+AGG + chr8_4:5737925-5737944 Msa1309240:intron 45.0%
CAAACCTGTGGATCTAATGG+AGG - chr8_4:5737932-5737951 None:intergenic 45.0%
AAACCTCTCAGTCAAACCTG+TGG - chr8_4:5737944-5737963 None:intergenic 45.0%
TTCATTTGTGGTCGGGAACT+AGG + chr8_4:5737970-5737989 Msa1309240:CDS 45.0%
CTTCTCTGCATGTTACGATG+TGG + chr8_4:5738191-5738210 Msa1309240:intron 45.0%
CCGTCAAACTATTGCTACGT+TGG - chr8_4:5738347-5738366 None:intergenic 45.0%
GCAGCTCTTTCAACAAATGG+TGG + chr8_4:5738447-5738466 Msa1309240:CDS 45.0%
CGATGATTTCCTAACGGCTT+TGG + chr8_4:5738521-5738540 Msa1309240:CDS 45.0%
!! TTCCTAACGGCTTTGGAGTA+TGG + chr8_4:5738528-5738547 Msa1309240:CDS 45.0%
TTCCATACTCCAAAGCCGTT+AGG - chr8_4:5738533-5738552 None:intergenic 45.0%
AATAGCCTTCCCAGTACTCA+AGG + chr8_4:5738720-5738739 Msa1309240:CDS 45.0%
TGGAGGACGACGGAGAATTA+CGG - chr8_4:5728660-5728679 None:intergenic 50.0%
AATAGACTCCCTATCGGAGG+TGG - chr8_4:5728689-5728708 None:intergenic 50.0%
TCGAATAGACTCCCTATCGG+AGG - chr8_4:5728692-5728711 None:intergenic 50.0%
GGCTCGAATAGACTCCCTAT+CGG - chr8_4:5728695-5728714 None:intergenic 50.0%
AGGTACCTTCTTCAAGCGCA+TGG - chr8_4:5728716-5728735 None:intergenic 50.0%
CGAAAACAAGGCAGATGCAG+AGG - chr8_4:5730512-5730531 None:intergenic 50.0%
AGTCTTACGCTGTCTCTGGT+TGG + chr8_4:5730723-5730742 Msa1309240:intron 50.0%
GAGGAACTACCCTCCAGATA+TGG - chr8_4:5731231-5731250 None:intergenic 50.0%
GTAGTTCCTCCGAAACTTCC+AGG + chr8_4:5731241-5731260 Msa1309240:intron 50.0%
CTTCCAGGTCTCACCATAAC+TGG + chr8_4:5731256-5731275 Msa1309240:intron 50.0%
AAGCCAGTTATGGTGAGACC+TGG - chr8_4:5731262-5731281 None:intergenic 50.0%
TAAAACCACAGTCCCAAGCC+CGG + chr8_4:5731559-5731578 Msa1309240:intron 50.0%
GTTAATTGAAGCCCGGGCTT+GGG - chr8_4:5731574-5731593 None:intergenic 50.0%
GCCCAAATGGATCTTGTGCT+AGG + chr8_4:5731857-5731876 Msa1309240:intron 50.0%
CCCCTAGCACAAGATCCATT+TGG - chr8_4:5731862-5731881 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8_4:5732376-5732395 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr8_4:5732398-5732417 Msa1309240:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr8_4:5732399-5732418 Msa1309240:intron 50.0%
GACCGCTATGCAATAAGCCA+AGG + chr8_4:5733067-5733086 Msa1309240:intron 50.0%
CGCCTTGGCTTATTGCATAG+CGG - chr8_4:5733072-5733091 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG + chr8_4:5733088-5733107 Msa1309240:intron 50.0%
! ATGAGATAGCGGCGCAATAG+CGG + chr8_4:5733099-5733118 Msa1309240:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG + chr8_4:5733443-5733462 Msa1309240:intron 50.0%
TGTGTTCCGCAAAAGAGCCA+AGG + chr8_4:5733870-5733889 Msa1309240:CDS 50.0%
ATGTCCCGTGATCAAGACAC+AGG - chr8_4:5736114-5736133 None:intergenic 50.0%
ATCACGCGTGGCACAACTAT+TGG + chr8_4:5736389-5736408 Msa1309240:intron 50.0%
ATCCCACTATGGCAAGCACT+TGG + chr8_4:5736528-5736547 Msa1309240:intron 50.0%
CAACCAAGTGCTTGCCATAG+TGG - chr8_4:5736534-5736553 None:intergenic 50.0%
CACGACGGTTGTTGGAATGT+TGG - chr8_4:5736633-5736652 None:intergenic 50.0%
CAGTGTGCTCTTGCAGTTCA+CGG + chr8_4:5736963-5736982 Msa1309240:CDS 50.0%
CGGGTGTAATGATTCCGTAC+AGG + chr8_4:5737087-5737106 Msa1309240:intron 50.0%
TATGTTTGGAAAGGCCCTGG+AGG + chr8_4:5737119-5737138 Msa1309240:CDS 50.0%
CAAGCTACTCTGAGTACCCT+TGG + chr8_4:5737223-5737242 Msa1309240:CDS 50.0%
GGCAGATTGGCATGCTTCAA+TGG - chr8_4:5737278-5737297 None:intergenic 50.0%
AACCTCGTTAAGTAGGTGGC+CGG - chr8_4:5737299-5737318 None:intergenic 50.0%
GATCCACAGGTTTGACTGAG+AGG + chr8_4:5737938-5737957 Msa1309240:intron 50.0%
! TTCAGGCATCGCAGCTTGTA+TGG + chr8_4:5738052-5738071 Msa1309240:intron 50.0%
! TCAGGCATCGCAGCTTGTAT+GGG + chr8_4:5738053-5738072 Msa1309240:intron 50.0%
TATGGAATGCCTCCAGCTTC+TGG + chr8_4:5738546-5738565 Msa1309240:CDS 50.0%
! AATGCCTCCAGCTTCTGGAA+TGG + chr8_4:5738551-5738570 Msa1309240:CDS 50.0%
TGTACCATTCCAGAAGCTGG+AGG - chr8_4:5738558-5738577 None:intergenic 50.0%
!! TTGGACCTTGAGTACTGGGA+AGG - chr8_4:5738728-5738747 None:intergenic 50.0%
TGTGACCCAAGTCACCAAGT+GGG - chr8_4:5739018-5739037 None:intergenic 50.0%
TTGTGACCCAAGTCACCAAG+TGG - chr8_4:5739019-5739038 None:intergenic 50.0%
AGAATTACGGCGGTTGCGAC+CGG - chr8_4:5728647-5728666 None:intergenic 55.0%
AGGACGACGGAGAATTACGG+CGG - chr8_4:5728657-5728676 None:intergenic 55.0%
CACCACTTCCACCTCCGATA+GGG + chr8_4:5728678-5728697 Msa1309240:CDS 55.0%
TCGAGCCATGCGCTTGAAGA+AGG + chr8_4:5728708-5728727 Msa1309240:CDS 55.0%
! CATGTGTCGATGTCGGACAC+CGG + chr8_4:5729350-5729369 Msa1309240:intron 55.0%
GTGAGACCTGGAAGTTTCGG+AGG - chr8_4:5731250-5731269 None:intergenic 55.0%
AAAACCACAGTCCCAAGCCC+GGG + chr8_4:5731560-5731579 Msa1309240:intron 55.0%
GGTTAATTGAAGCCCGGGCT+TGG - chr8_4:5731575-5731594 None:intergenic 55.0%
ACTGGCCCGTCCCAGATAAT+AGG - chr8_4:5732197-5732216 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr8_4:5732411-5732430 Msa1309240:intron 55.0%
! GGAAGGGGTCCCACCATTTT+TGG - chr8_4:5732482-5732501 None:intergenic 55.0%
! AAAATGGTGGGACCCCTTCC+CGG + chr8_4:5732482-5732501 Msa1309240:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr8_4:5732509-5732528 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr8_4:5732510-5732529 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr8_4:5732514-5732533 Msa1309240:intron 55.0%
GGCTTATTGCATAGCGGTCC+TGG - chr8_4:5733066-5733085 None:intergenic 55.0%
CGGAACACATCAGCTACCTC+TGG - chr8_4:5733859-5733878 None:intergenic 55.0%
AGGCACACATGTACTGGGTG+AGG - chr8_4:5734221-5734240 None:intergenic 55.0%
AGCGCAGGCACACATGTACT+GGG - chr8_4:5734226-5734245 None:intergenic 55.0%
TAGCGCAGGCACACATGTAC+TGG - chr8_4:5734227-5734246 None:intergenic 55.0%
TGGAGTTGTTGCCACGTGAC+TGG + chr8_4:5736409-5736428 Msa1309240:intron 55.0%
AGTTGTTGCCACGTGACTGG+TGG + chr8_4:5736412-5736431 Msa1309240:intron 55.0%
ATCCATGACCACCAGTCACG+TGG - chr8_4:5736423-5736442 None:intergenic 55.0%
TTTGGAAAGGCCCTGGAGGA+GGG + chr8_4:5737123-5737142 Msa1309240:CDS 55.0%
TAAGTAGGTGGCCGGCAGAT+TGG - chr8_4:5737291-5737310 None:intergenic 55.0%
CTGCGGTGTGGTTTAGCCAA+TGG - chr8_4:5737593-5737612 None:intergenic 55.0%
! CATTGGCTAAACCACACCGC+AGG + chr8_4:5737591-5737610 Msa1309240:CDS 55.0%
TCCAGGGACTTGGGATTGAC+AGG + chr8_4:5738656-5738675 Msa1309240:intron 55.0%
ACCTGTCAATCCCAAGTCCC+TGG - chr8_4:5738660-5738679 None:intergenic 55.0%
GGGACTTGGGATTGACAGGT+TGG + chr8_4:5738660-5738679 Msa1309240:intron 55.0%
! GTGCTCCCACTTGGTGACTT+GGG + chr8_4:5739010-5739029 Msa1309240:three_prime_UTR 55.0%
! GTGGAAGTGGTGGAGGACGA+CGG - chr8_4:5728670-5728689 None:intergenic 60.0%
ATCGGAGGTGGAAGTGGTGG+AGG - chr8_4:5728677-5728696 None:intergenic 60.0%
CCTATCGGAGGTGGAAGTGG+TGG - chr8_4:5728680-5728699 None:intergenic 60.0%
CCACCACTTCCACCTCCGAT+AGG + chr8_4:5728677-5728696 Msa1309240:CDS 60.0%
CTCCCTATCGGAGGTGGAAG+TGG - chr8_4:5728683-5728702 None:intergenic 60.0%
! TATCTGGGACGGGCCAGTCT+AGG + chr8_4:5732199-5732218 Msa1309240:intron 60.0%
! ATCTGGGACGGGCCAGTCTA+GGG + chr8_4:5732200-5732219 Msa1309240:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8_4:5732365-5732384 Msa1309240:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr8_4:5732515-5732534 Msa1309240:intron 60.0%
GGCGCTATAGCGGCCAATAG+CGG + chr8_4:5733021-5733040 Msa1309240:intron 60.0%
TGCCACGTGACTGGTGGTCA+TGG + chr8_4:5736418-5736437 Msa1309240:intron 60.0%
GTTTGGAAAGGCCCTGGAGG+AGG + chr8_4:5737122-5737141 Msa1309240:CDS 60.0%
TGCATGGTCTCCCTCCTCCA+GGG - chr8_4:5737136-5737155 None:intergenic 60.0%
TGCCGGCCACCTACTTAACG+AGG + chr8_4:5737294-5737313 Msa1309240:CDS 60.0%
! GGTGCTCCCACTTGGTGACT+TGG + chr8_4:5739009-5739028 Msa1309240:three_prime_UTR 60.0%
! GCGCGGATAAGAAGCGTGCG+AGG - chr8_4:5728598-5728617 None:intergenic 65.0%
ATTACGGCGGTTGCGACCGG+AGG - chr8_4:5728644-5728663 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr8_4:5732497-5732516 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr8_4:5732498-5732517 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr8_4:5732497-5732516 Msa1309240:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr8_4:5732498-5732517 Msa1309240:intron 65.0%
GCGGCCGCAACACTGCATAG+TGG + chr8_4:5733118-5733137 Msa1309240:intron 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG - chr8_4:5733500-5733519 None:intergenic 65.0%
GTGCATGGTCTCCCTCCTCC+AGG - chr8_4:5737137-5737156 None:intergenic 65.0%
TTCTAGGCGTCCTCGCTGCC+AGG - chr8_4:5738397-5738416 None:intergenic 65.0%
GAAGCCCGGGCTTGGGACTG+TGG - chr8_4:5731567-5731586 None:intergenic 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr8_4:5732499-5732518 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr8_4:5732503-5732522 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr8_4:5732504-5732523 None:intergenic 70.0%
GCGGTTGCGACCGGAGGAGG+TGG - chr8_4:5728638-5728657 None:intergenic 75.0%
ACGGCGGTTGCGACCGGAGG+AGG - chr8_4:5728641-5728660 None:intergenic 75.0%
AGCGGCCAATAGCGGCCGCG+CGG + chr8_4:5733029-5733048 Msa1309240:intron 75.0%
CCAATAGCGGCCGCGCGGTG+CGG + chr8_4:5733034-5733053 Msa1309240:intron 75.0%
! CCGCACCGCGCGGCCGCTAT+TGG - chr8_4:5733037-5733056 None:intergenic 80.0%
! CTGGACCGCACCGCACCGCG+CGG - chr8_4:5733047-5733066 None:intergenic 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + chr8_4:5733039-5733058 Msa1309240:intron 85.0%
! CGCGCGGTGCGGTGCGGTCC+AGG + chr8_4:5733045-5733064 Msa1309240:intron 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 5728452 5739042 5728452 ID=Msa1309240;Name=Msa1309240
chr8_4 mRNA 5728452 5739042 5728452 ID=Msa1309240-mRNA-1;Parent=Msa1309240;Name=Msa1309240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=65|1|1|1|0.92|1|14|289|579
chr8_4 exon 5728452 5728729 5728452 ID=Msa1309240-mRNA-1:exon:1829;Parent=Msa1309240-mRNA-1
chr8_4 exon 5729836 5730054 5729836 ID=Msa1309240-mRNA-1:exon:1830;Parent=Msa1309240-mRNA-1
chr8_4 exon 5730226 5730334 5730226 ID=Msa1309240-mRNA-1:exon:1831;Parent=Msa1309240-mRNA-1
chr8_4 exon 5732783 5732891 5732783 ID=Msa1309240-mRNA-1:exon:1832;Parent=Msa1309240-mRNA-1
chr8_4 exon 5733834 5733891 5733834 ID=Msa1309240-mRNA-1:exon:1833;Parent=Msa1309240-mRNA-1
chr8_4 exon 5734769 5734837 5734769 ID=Msa1309240-mRNA-1:exon:1834;Parent=Msa1309240-mRNA-1
chr8_4 exon 5735636 5735743 5735636 ID=Msa1309240-mRNA-1:exon:1835;Parent=Msa1309240-mRNA-1
chr8_4 exon 5736223 5736315 5736223 ID=Msa1309240-mRNA-1:exon:1836;Parent=Msa1309240-mRNA-1
chr8_4 exon 5736903 5737007 5736903 ID=Msa1309240-mRNA-1:exon:1837;Parent=Msa1309240-mRNA-1
chr8_4 exon 5737109 5737315 5737109 ID=Msa1309240-mRNA-1:exon:1838;Parent=Msa1309240-mRNA-1
chr8_4 exon 5737518 5737612 5737518 ID=Msa1309240-mRNA-1:exon:1839;Parent=Msa1309240-mRNA-1
chr8_4 exon 5737939 5738029 5737939 ID=Msa1309240-mRNA-1:exon:1840;Parent=Msa1309240-mRNA-1
chr8_4 exon 5738402 5738572 5738402 ID=Msa1309240-mRNA-1:exon:1841;Parent=Msa1309240-mRNA-1
chr8_4 exon 5738661 5739042 5738661 ID=Msa1309240-mRNA-1:exon:1842;Parent=Msa1309240-mRNA-1
chr8_4 five_prime_UTR 5728452 5728516 5728452 ID=Msa1309240-mRNA-1:five_prime_utr;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5728517 5728729 5728517 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5729836 5730054 5729836 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5730226 5730334 5730226 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5732783 5732891 5732783 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5733834 5733891 5733834 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5734769 5734837 5734769 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5735636 5735743 5735636 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5736223 5736315 5736223 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5736903 5737007 5736903 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5737109 5737315 5737109 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5737518 5737612 5737518 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5737939 5738029 5737939 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5738402 5738572 5738402 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 CDS 5738661 5738753 5738661 ID=Msa1309240-mRNA-1:cds;Parent=Msa1309240-mRNA-1
chr8_4 three_prime_UTR 5738754 5739042 5738754 ID=Msa1309240-mRNA-1:three_prime_utr;Parent=Msa1309240-mRNA-1
Gene Sequence

>Msa1309240

ATGGTGGAGGCGTTGAAACTGTTGAACCTAACATGGAACCCTTTGATGAACAATTTCATTCACGCATTTCGTCGAACACCTCGCACGCTTCTTATCCGCGCCTCTTCTTCTTATTCAACCACCTCCTCCGGTCGCAACCGCCGTAATTCTCCGTCGTCCTCCACCACTTCCACCTCCGATAGGGAGTCTATTCGAGCCATGCGCTTGAAGAAGGTTGAAGAACTTAGAAGCAAGGGGCTTGATCCCTATGCTTATGAGTGGAACAAAACGCACAGTGCAAATCAGTTACAAGATATATATAGAGATTTAGGAAATGGTGAAGAAACTAATAGTGAGACTGATCATGTATCTATTGCGGGAAGAATTGTTGCTAGGAGAGCATTTGGAAAGCTTGCCTTTTTGACACTAAGAGACGATTCAGGGACAATTCAGCTCTATTGCGAAAAGGAGAGACTTGATGATCAGTTTGAGCAGTTGAAGGCATATGTTGATATTGGTGATATACTAGGTGCAAGAGGAACAATTAAACGCACAGAAAAAGGGGAACTTTCTGTGTGTGTGCTATCTTTTGCAATCCTTACAAAATCTTTGCTTCCACTTCCTGACAAATATCACGGTCTAACTGATATAGATATACGCTATCGCCAGAGGTATGTAGATATGATTGCAAATCCAGAGGTAGCTGATGTGTTCCGCAAAAGAGCCAAGGTTGTATCAGAGATACGGAGGACAATGGATTCTTTAGGTTTCGTTGAGGTTGAAACTCCAGTTTTGCAGGGAGAAGCTGGAGGAGCCGAAGCTAGACCATTCGTGACATACCACAATTCTCTTGGAAGAGACTTATATTTGAGAATTGCGACTGAATTGCACCTAAAGAGAATGCTGGTGGGTGGGTTTGAAAAAGTATACGAGATTGGTCGAATATTTAGAAATGAAGGAATATCAACTCGTCATAATCCGGAATTTACAACTATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTAGCAGAGGAAATTGTCACTCAGTGTGCTCTTGCAGTTCACGGAAAGCTTACTGTTGATTATCAGGGAGTTGAGATATGTTTGGAAAGGCCCTGGAGGAGGGAGACCATGCACAATCTTGTTAAAGAAATTTCCGGGATCGATTTCAATGAATTGGGAAATGATCTCGAGGTTGCAAAACAAGCTACTCTGAGTACCCTTGGAAAGAATCTTGATAACAAGGATAAAGCTTCCATTGAAGCATGCCAATCTGCCGGCCACCTACTTAACGAGGTTTTTGAGATATATGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTACCCAATTGAGATATCTCCATTGGCTAAACCACACCGCAGATCCACAGGTTTGACTGAGAGGTTTGAACTTTTCATTTGTGGTCGGGAACTAGGCAATGCATTCTCTGAATTGACTGATCCTATAGATCAGCGAGGACGCCTAGAAGATCAAATTAGACAACACGAAAAGAAAAAAGCAGCTCTTTCAACAAATGGTGGTAAAAAAGAAGGAATAGAAAATGAGGATGATTCGTATGATGTGACTCTTGACGATGATTTCCTAACGGCTTTGGAGTATGGAATGCCTCCAGCTTCTGGAATGGGACTTGGGATTGACAGGTTGGTGATGCTTTTGACAAATTCTCCCAGCATTAGAGATGTAATAGCCTTCCCAGTACTCAAGGTCCAACAATAA

Protein sequence

>Msa1309240

MVEALKLLNLTWNPLMNNFIHAFRRTPRTLLIRASSSYSTTSSGRNRRNSPSSSTTSTSDRESIRAMRLKKVEELRSKGLDPYAYEWNKTHSANQLQDIYRDLGNGEETNSETDHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLDDQFEQLKAYVDIGDILGARGTIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDIRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGFVEVETPVLQGEAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVHGKLTVDYQGVEICLERPWRRETMHNLVKEISGIDFNELGNDLEVAKQATLSTLGKNLDNKDKASIEACQSAGHLLNEVFEIYVEPKLIQPTFVLDYPIEISPLAKPHRRSTGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQIRQHEKKKAALSTNGGKKEGIENEDDSYDVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVLKVQQ*