Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720840 | XP_003612953.2 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720840 | sp|Q94AM1|OOPDA_ARATH | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720840 | G7KGF6 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0720840 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa0030000 | Msa0720840 | 0.806401 | 8.374757e-50 | -8.615850e-47 |
| Msa0032120 | Msa0720840 | 0.825306 | 5.037738e-54 | -8.615850e-47 |
| Msa0032400 | Msa0720840 | 0.837078 | 6.426428e-57 | -8.615850e-47 |
| Msa0055590 | Msa0720840 | 0.808725 | 2.689438e-50 | -8.615850e-47 |
| Msa0059590 | Msa0720840 | 0.811602 | 6.450636e-51 | -8.615850e-47 |
| Msa0073820 | Msa0720840 | 0.813478 | 2.508008e-51 | -8.615850e-47 |
| Msa0094700 | Msa0720840 | 0.826527 | 2.582827e-54 | -8.615850e-47 |
| Msa0646390 | Msa0720840 | 0.800498 | 1.401046e-48 | -8.615850e-47 |
| Msa0707780 | Msa0720840 | 0.821420 | 4.076477e-53 | -8.615850e-47 |
| Msa0709480 | Msa0720840 | 0.872363 | 3.369153e-67 | -8.615850e-47 |
| Msa0720840 | Msa0726610 | 0.801084 | 1.064045e-48 | -8.615850e-47 |
| Msa0720840 | Msa0735470 | 0.814987 | 1.164343e-51 | -8.615850e-47 |
| Msa0720840 | Msa0761320 | 0.957028 | 7.262808e-115 | -8.615850e-47 |
| Msa0720840 | Msa0770430 | 0.807326 | 5.337635e-50 | -8.615850e-47 |
| Msa0720840 | Msa0790830 | 0.850208 | 1.970336e-60 | -8.615850e-47 |
| Msa0720840 | Msa0803920 | 0.941114 | 7.298185e-101 | -8.615850e-47 |
| Msa0720840 | Msa0805940 | 0.829410 | 5.227851e-55 | -8.615850e-47 |
| Msa0720840 | Msa0814760 | 0.834748 | 2.505090e-56 | -8.615850e-47 |
| Msa0720840 | Msa0830410 | 0.829463 | 5.075421e-55 | -8.615850e-47 |
| Msa0720840 | Msa0841970 | 0.997739 | 3.118018e-248 | -8.615850e-47 |
| Msa0720840 | Msa0843690 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
| Msa0720840 | Msa0854590 | 0.816655 | 4.944188e-52 | -8.615850e-47 |
| Msa0720840 | Msa0855020 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa0720840 | Msa0901100 | 0.807319 | 5.355771e-50 | -8.615850e-47 |
| Msa0720840 | Msa0946650 | 0.820663 | 6.089714e-53 | -8.615850e-47 |
| Msa0720840 | Msa0968010 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0720840 | Msa1000470 | 0.800661 | 1.298161e-48 | -8.615850e-47 |
| Msa0720840 | Msa1011210 | 0.816498 | 5.360503e-52 | -8.615850e-47 |
| Msa0720840 | Msa1011240 | 0.829160 | 6.013855e-55 | -8.615850e-47 |
| Msa0720840 | Msa1020710 | 0.828826 | 7.245913e-55 | -8.615850e-47 |
| Msa0720840 | Msa1028460 | 0.824661 | 7.152745e-54 | -8.615850e-47 |
| Msa0720840 | Msa1072080 | 0.822199 | 2.692053e-53 | -8.615850e-47 |
| Msa0720840 | Msa1073840 | 0.800568 | 1.355995e-48 | -8.615850e-47 |
| Msa0720840 | Msa1084490 | 0.876203 | 1.682893e-68 | -8.615850e-47 |
| Msa0720840 | Msa1099030 | 0.838385 | 2.967251e-57 | -8.615850e-47 |
| Msa0720840 | Msa1125780 | 0.857000 | 2.198514e-62 | -8.615850e-47 |
| Msa0720840 | Msa1125950 | 0.858236 | 9.465315e-63 | -8.615850e-47 |
| Msa0720840 | Msa1129720 | 0.801274 | 9.729279e-49 | -8.615850e-47 |
| Msa0720840 | Msa1145370 | 0.802093 | 6.607642e-49 | -8.615850e-47 |
| Msa0720840 | Msa1156210 | 0.803582 | 3.253967e-49 | -8.615850e-47 |
| Msa0720840 | Msa1159100 | 0.810496 | 1.119850e-50 | -8.615850e-47 |
| Msa0720840 | Msa1166180 | 0.821603 | 3.698401e-53 | -8.615850e-47 |
| Msa0720840 | Msa1166280 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0720840 | Msa1171340 | 0.850665 | 1.466170e-60 | -8.615850e-47 |
| Msa0720840 | Msa1206560 | 0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0720840 | Msa1208980 | 0.818116 | 2.318106e-52 | -8.615850e-47 |
| Msa0720840 | Msa1211070 | 0.832003 | 1.210895e-55 | -8.615850e-47 |
| Msa0720840 | Msa1224150 | 0.800938 | 1.139637e-48 | -8.615850e-47 |
| Msa0720840 | Msa1229660 | 0.819464 | 1.145544e-52 | -8.615850e-47 |
| Msa0720840 | Msa1229690 | 0.818539 | 1.859772e-52 | -8.615850e-47 |
| Msa0720840 | Msa1244260 | 0.817906 | 2.585476e-52 | -8.615850e-47 |
| Msa0720840 | Msa1280120 | 0.802973 | 4.350542e-49 | -8.615850e-47 |
| Msa0720840 | Msa1283770 | 0.806482 | 8.053709e-50 | -8.615850e-47 |
| Msa0720840 | Msa1310110 | 0.805650 | 1.204772e-49 | -8.615850e-47 |
| Msa0720840 | Msa1310340 | 0.840621 | 7.789441e-58 | -8.615850e-47 |
| Msa0720840 | Msa1337340 | 0.800159 | 1.642821e-48 | -8.615850e-47 |
| Msa0720840 | Msa1375630 | 0.861870 | 7.568173e-64 | -8.615850e-47 |
| Msa0720840 | Msa1376530 | 0.858448 | 8.179638e-63 | -8.615850e-47 |
| Msa0720840 | Msa1393530 | 0.804020 | 2.639503e-49 | -8.615850e-47 |
| Msa0720840 | Msa1398480 | 0.819175 | 1.333399e-52 | -8.615850e-47 |
| Msa0720840 | Msa1410170 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
| Msa0720840 | Msa1426290 | 0.806597 | 7.616121e-50 | -8.615850e-47 |
| Msa0720840 | Msa1437690 | 0.803706 | 3.067636e-49 | -8.615850e-47 |
| Msa0720840 | Msa1454020 | 0.832339 | 1.000443e-55 | -8.615850e-47 |
| Msa0157020 | Msa0720840 | 0.800138 | 1.658500e-48 | -8.615850e-47 |
| Msa0162030 | Msa0720840 | 0.814707 | 1.343056e-51 | -8.615850e-47 |
| Msa0162050 | Msa0720840 | 0.817511 | 3.174585e-52 | -8.615850e-47 |
| Msa0162070 | Msa0720840 | 0.833327 | 5.684976e-56 | -8.615850e-47 |
| Msa0171780 | Msa0720840 | 0.838733 | 2.413302e-57 | -8.615850e-47 |
| Msa0171930 | Msa0720840 | 0.830976 | 2.168247e-55 | -8.615850e-47 |
| Msa0185550 | Msa0720840 | 0.856854 | 2.427612e-62 | -8.615850e-47 |
| Msa0185700 | Msa0720840 | 0.827743 | 1.321865e-54 | -8.615850e-47 |
| Msa0207180 | Msa0720840 | 0.813991 | 1.933544e-51 | -8.615850e-47 |
| Msa0214730 | Msa0720840 | 0.809706 | 1.657166e-50 | -8.615850e-47 |
| Msa0230400 | Msa0720840 | 0.818112 | 2.323387e-52 | -8.615850e-47 |
| Msa0372090 | Msa0720840 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0374070 | Msa0720840 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa0380420 | Msa0720840 | 0.862698 | 4.215493e-64 | -8.615850e-47 |
| Msa0420700 | Msa0720840 | 0.814209 | 1.731289e-51 | -8.615850e-47 |
| Msa0423250 | Msa0720840 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0466730 | Msa0720840 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0476150 | Msa0720840 | 0.855455 | 6.238634e-62 | -8.615850e-47 |
| Msa0476180 | Msa0720840 | 0.836783 | 7.642198e-57 | -8.615850e-47 |
| Msa0477780 | Msa0720840 | 0.826396 | 2.776144e-54 | -8.615850e-47 |
| Msa0274780 | Msa0720840 | 0.817989 | 2.476811e-52 | -8.615850e-47 |
| Msa0304870 | Msa0720840 | 0.806336 | 8.644099e-50 | -8.615850e-47 |
| Msa0314790 | Msa0720840 | 0.805896 | 1.069763e-49 | -8.615850e-47 |
| Msa0315480 | Msa0720840 | 0.809803 | 1.579879e-50 | -8.615850e-47 |
| Msa0341260 | Msa0720840 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0349000 | Msa0720840 | 0.800794 | 1.219153e-48 | -8.615850e-47 |
| Msa0486200 | Msa0720840 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720840 | MtrunA17_Chr5g0411651 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Msa0720840 | MtrunA17_Chr3g0123041 | 27.787 | 583 | 373 | 17 | 199 | 773 | 153 | 695 | 1.64e-54 | 200 |
| Msa0720840 | MtrunA17_Chr3g0079521 | 24.096 | 664 | 453 | 18 | 137 | 784 | 66 | 694 | 4.80e-47 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720840 | AT5G65620.2 | 76.588 | 803 | 169 | 3 | 1 | 786 | 1 | 801 | 0.0 | 1241 |
| Msa0720840 | AT5G65620.1 | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Msa0720840 | AT5G10540.1 | 81.662 | 698 | 128 | 0 | 89 | 786 | 2 | 699 | 0.0 | 1209 |
| Msa0720840 | AT1G67690.1 | 26.268 | 552 | 365 | 16 | 233 | 778 | 187 | 702 | 3.55e-49 | 185 |
| Msa0720840 | AT5G51540.1 | 24.540 | 652 | 438 | 18 | 140 | 771 | 67 | 684 | 2.60e-48 | 182 |
Find 181 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTACCTTCTCAGTTTA+TGG | 0.075843 | 5_1:-17092469 | Msa0720840:CDS |
| GAGACTGTCTTCCATGAATT+TGG | 0.180270 | 5_1:-17092570 | Msa0720840:CDS |
| GGATAGGTTGGCTGTTGTTT+GGG | 0.205666 | 5_1:-17097844 | Msa0720840:CDS |
| TCGTGCTCTTCTTGAGAAAT+TGG | 0.224630 | 5_1:-17098487 | Msa0720840:intron |
| TAAGAACTGCCTCCTTTATT+TGG | 0.229698 | 5_1:+17096733 | None:intergenic |
| AGCTTCTGATATACGTCTTC+TGG | 0.235471 | 5_1:+17092249 | None:intergenic |
| ATGAGACACGAAGCACTTAT+TGG | 0.235646 | 5_1:-17098846 | Msa0720840:CDS |
| TGGATAGGTTGGCTGTTGTT+TGG | 0.249872 | 5_1:-17097845 | Msa0720840:CDS |
| TTGATTTAGAAAGACTTTAA+TGG | 0.272313 | 5_1:-17092307 | Msa0720840:intron |
| CACTTCAACACATGCTTACT+AGG | 0.287061 | 5_1:-17092542 | Msa0720840:CDS |
| CTTCTCAGTTTATGGAAAAC+TGG | 0.306346 | 5_1:-17092461 | Msa0720840:CDS |
| AGCTTCAGTCATATATTTGC+AGG | 0.317151 | 5_1:-17091552 | Msa0720840:intron |
| TTCACCTTCGTTTACTTGTT+CGG | 0.325252 | 5_1:-17098619 | Msa0720840:CDS |
| AGGGTCTAGTTGCTGGTATT+AGG | 0.327586 | 5_1:-17092512 | Msa0720840:CDS |
| AAAATTTGGGGAGAACGTTC+TGG | 0.328152 | 5_1:-17096087 | Msa0720840:CDS |
| AGGGAGACCATTCTTGCTCT+TGG | 0.328299 | 5_1:-17090703 | Msa0720840:CDS |
| GGATTACCTGCTACTGCTCT+TGG | 0.328426 | 5_1:-17096014 | Msa0720840:CDS |
| ATAAAGGAGGCAGTTCTTAA+TGG | 0.339071 | 5_1:-17096729 | Msa0720840:CDS |
| GGGTCTAGTTGCTGGTATTA+GGG | 0.341623 | 5_1:-17092511 | Msa0720840:CDS |
| CACATTGGGACATTAGCTTT+TGG | 0.345362 | 5_1:-17095094 | Msa0720840:CDS |
| TGATTTAGAAAGACTTTAAT+GGG | 0.346240 | 5_1:-17092306 | Msa0720840:intron |
| AATCCCTTCCTTGTCCCCTT+TGG | 0.350778 | 5_1:-17098686 | Msa0720840:CDS |
| TCGAGCATCGAGTGGTGATT+TGG | 0.351443 | 5_1:-17095745 | Msa0720840:CDS |
| TTTATCAACAGTTGCCATCT+TGG | 0.353309 | 5_1:+17095566 | None:intergenic |
| GCCTAAGTTGGTAGAACCTT+TGG | 0.367143 | 5_1:-17097877 | Msa0720840:CDS |
| AGAATGCTTAGGGTTGAAAA+AGG | 0.370003 | 5_1:+17098713 | None:intergenic |
| TTCTCTGCATTTGAGGATGC+AGG | 0.375358 | 5_1:-17090996 | Msa0720840:CDS |
| TAGAAACGGGACACAAGTTC+AGG | 0.377165 | 5_1:-17090723 | Msa0720840:CDS |
| TGCACAAAGCGCAGTATCTA+AGG | 0.381372 | 5_1:-17095985 | Msa0720840:intron |
| AGAAGCTTCGTAAAGCTTCC+TGG | 0.381601 | 5_1:-17095527 | Msa0720840:CDS |
| CTTCATACAAAATATGTTCC+TGG | 0.382795 | 5_1:-17091663 | Msa0720840:CDS |
| GGTCTTTAGAAAATTTCTTA+AGG | 0.383307 | 5_1:+17095144 | None:intergenic |
| TCAAGAAGAGCACGAATTCC+CGG | 0.388964 | 5_1:+17098495 | None:intergenic |
| AGATGCTTTCTCTGCATTTG+AGG | 0.398525 | 5_1:-17091003 | Msa0720840:CDS |
| CGATTCAAGACTCTCCTGAT+TGG | 0.407241 | 5_1:-17097237 | Msa0720840:CDS |
| AAAATTTGCAACTGTCGATC+TGG | 0.407728 | 5_1:-17091688 | Msa0720840:CDS |
| TACCTTTGCAGACCAAATAA+AGG | 0.408649 | 5_1:-17096745 | Msa0720840:intron |
| TCTGCGATCAACATCATAGA+TGG | 0.409287 | 5_1:+17091629 | None:intergenic |
| GAAGATGAGGGTCTAGTTGC+TGG | 0.410208 | 5_1:-17092519 | Msa0720840:CDS |
| AGGGATTTATGAGAATGCTT+AGG | 0.411147 | 5_1:+17098702 | None:intergenic |
| CAATGGCCTAATTGCAGCTT+AGG | 0.414174 | 5_1:-17090414 | Msa0720840:exon |
| GGGATTTATGAGAATGCTTA+GGG | 0.418338 | 5_1:+17098703 | None:intergenic |
| GATTACCTGCTACTGCTCTT+GGG | 0.426451 | 5_1:-17096013 | Msa0720840:CDS |
| ATACATAATTGTGGTTGTTA+AGG | 0.428752 | 5_1:-17090333 | Msa0720840:three_prime_UTR |
| GAAAATGCCACCGCTGAGAA+TGG | 0.428871 | 5_1:-17095867 | Msa0720840:CDS |
| AAGAGTCCATCCATAACATT+TGG | 0.435222 | 5_1:+17094374 | None:intergenic |
| TGTTCTGTAGGAACGTGATT+TGG | 0.437308 | 5_1:-17097931 | Msa0720840:intron |
| ACAGTTTAACAAAATTGAAC+AGG | 0.437317 | 5_1:-17096679 | Msa0720840:intron |
| GATAGGTTGGCTGTTGTTTG+GGG | 0.438512 | 5_1:-17097843 | Msa0720840:CDS |
| ACCTGCTACTGCTCTTGGGT+TGG | 0.439003 | 5_1:-17096009 | Msa0720840:CDS |
| ACCATTCTTGCTCTTGGAGG+TGG | 0.441175 | 5_1:-17090697 | Msa0720840:CDS |
| AAACTTGGCTTGCTTCCTAC+TGG | 0.443627 | 5_1:+17093998 | None:intergenic |
| TCGCTAAGTGTCTTCCAATC+AGG | 0.444065 | 5_1:+17097223 | None:intergenic |
| TTTAAAGCTGAGGTTGGAAA+AGG | 0.445783 | 5_1:-17095697 | Msa0720840:CDS |
| TACACAGGCTGTTGTAGAAA+CGG | 0.446001 | 5_1:-17090737 | Msa0720840:intron |
| GGAAAAGGAAGAAGACCAAA+GGG | 0.448040 | 5_1:+17098671 | None:intergenic |
| ACACAGGCTGTTGTAGAAAC+GGG | 0.450144 | 5_1:-17090736 | Msa0720840:intron |
| AGTGCCAGCACGATAAGTTC+TGG | 0.452574 | 5_1:+17092218 | None:intergenic |
| AGCTGATGATTTGACACATT+GGG | 0.453880 | 5_1:-17095108 | Msa0720840:CDS |
| GCCACCTCCAAGAGCAAGAA+TGG | 0.454854 | 5_1:+17090696 | None:intergenic |
| TAATCATCTCAAAGCTGTTA+AGG | 0.456249 | 5_1:-17097814 | Msa0720840:CDS |
| TACTTGTTCGGCTTCTTCCA+TGG | 0.461561 | 5_1:-17098607 | Msa0720840:CDS |
| TGCATTTGAGGATGCAGGAT+TGG | 0.466218 | 5_1:-17090991 | Msa0720840:CDS |
| GAGACCATTCTTGCTCTTGG+AGG | 0.466637 | 5_1:-17090700 | Msa0720840:CDS |
| TTCTAAAGACCAGGGTGCAT+TGG | 0.468313 | 5_1:-17095132 | Msa0720840:CDS |
| CTCTATCCTAAGCTGCAATT+AGG | 0.469049 | 5_1:+17090408 | None:intergenic |
| CTAATTGCAGCTTAGGATAG+AGG | 0.471602 | 5_1:-17090407 | Msa0720840:exon |
| GCTTCTGATATACGTCTTCT+GGG | 0.472090 | 5_1:+17092250 | None:intergenic |
| TTCATACAAAATATGTTCCT+GGG | 0.472245 | 5_1:-17091662 | Msa0720840:CDS |
| ACCTTGTACTGCAGCATCCC+AGG | 0.474341 | 5_1:+17095509 | None:intergenic |
| TTGTGTCTGAGCAATGCATC+TGG | 0.474510 | 5_1:+17090434 | None:intergenic |
| GAAGTGCGTGTCCAAATTCA+TGG | 0.479227 | 5_1:+17092559 | None:intergenic |
| AAAATGCCACCGCTGAGAAT+GGG | 0.481659 | 5_1:-17095866 | Msa0720840:CDS |
| GTTATTGTAGTTGAGAAGCT+TGG | 0.482142 | 5_1:+17095674 | None:intergenic |
| AACGGAGTGTGGAACCTTCG+TGG | 0.487427 | 5_1:-17097899 | Msa0720840:CDS |
| TCCTGGGATGCTGCAGTACA+AGG | 0.493226 | 5_1:-17095510 | Msa0720840:intron |
| TGAAGCGAAGCACGTGAGAC+CGG | 0.496227 | 5_1:-17098514 | Msa0720840:CDS |
| TTCGCTTCAACAACATCAAA+AGG | 0.496612 | 5_1:+17098528 | None:intergenic |
| TCACGGAATGTCATTAAACT+TGG | 0.498854 | 5_1:+17093983 | None:intergenic |
| TGAATCAATGCAGAAGGAAA+AGG | 0.499062 | 5_1:+17098656 | None:intergenic |
| ATCAAGAGCAGAAGCAGCCA+TGG | 0.501446 | 5_1:+17098590 | None:intergenic |
| GAAGAAGACCAAAGGGGACA+AGG | 0.501580 | 5_1:+17098678 | None:intergenic |
| CTGAGCAATGCATCTGGTGT+TGG | 0.501895 | 5_1:+17090440 | None:intergenic |
| AAGTACCTGCACATCTTCAA+TGG | 0.503459 | 5_1:+17097770 | None:intergenic |
| AAAGCTCATTACAGATAAGA+AGG | 0.504735 | 5_1:-17096045 | Msa0720840:CDS |
| TCCAAAGGTTCTACCAACTT+AGG | 0.505439 | 5_1:+17097876 | None:intergenic |
| TTGTTAGGTGGATATGCAGC+TGG | 0.507023 | 5_1:-17091192 | Msa0720840:intron |
| CGCCTGATGGTAACTCATCA+AGG | 0.512302 | 5_1:-17094057 | Msa0720840:CDS |
| GCCAGCTGACGGTCTAGCTC+CGG | 0.513713 | 5_1:-17094315 | Msa0720840:intron |
| GCCAACCCAAGAGCAGTAGC+AGG | 0.516424 | 5_1:+17096008 | None:intergenic |
| GCTTTGAACGCATTATAAAG+AGG | 0.517387 | 5_1:+17097259 | None:intergenic |
| ACAGATAAGAAGGAGATTGA+AGG | 0.520338 | 5_1:-17096035 | Msa0720840:CDS |
| AGGAATCTGTCCTCTGGCAA+TGG | 0.520908 | 5_1:+17091579 | None:intergenic |
| TTCAGCCATTGAAGATGTGC+AGG | 0.521027 | 5_1:-17097775 | Msa0720840:intron |
| TCTCTGCCAAATGTTATGGA+TGG | 0.522804 | 5_1:-17094380 | Msa0720840:CDS |
| TTTCGTGTCAAAGATTCCTC+AGG | 0.523767 | 5_1:-17094181 | Msa0720840:CDS |
| AACCTTGATGAGTTACCATC+AGG | 0.524848 | 5_1:+17094055 | None:intergenic |
| CTGCAAAGGAATCTGTCCTC+TGG | 0.524924 | 5_1:+17091573 | None:intergenic |
| AAAACAAACTCCTTCAAAAG+AGG | 0.528565 | 5_1:+17098555 | None:intergenic |
| ACCGGAGCTAGACCGTCAGC+TGG | 0.528990 | 5_1:+17094314 | None:intergenic |
| ATAGGTTGGCTGTTGTTTGG+GGG | 0.531375 | 5_1:-17097842 | Msa0720840:CDS |
| TGAGCATGTTTGATATAAGA+AGG | 0.536126 | 5_1:+17098820 | None:intergenic |
| GGAGAAGATTGTGGATAGGT+TGG | 0.537085 | 5_1:-17097856 | Msa0720840:CDS |
| TGCATGACTGCAATATAACT+TGG | 0.537134 | 5_1:+17095819 | None:intergenic |
| GCCGCCAGAACTTATCGTGC+TGG | 0.539991 | 5_1:-17092222 | Msa0720840:CDS |
| AGAACCTTTGGAGAAGATTG+TGG | 0.540574 | 5_1:-17097865 | Msa0720840:CDS |
| GAAGCTTCGTAAAGCTTCCT+GGG | 0.542327 | 5_1:-17095526 | Msa0720840:CDS |
| ATATATGACTGAAGCTGCAA+AGG | 0.543109 | 5_1:+17091559 | None:intergenic |
| TTGCACACCATGTGGGCCAC+AGG | 0.544073 | 5_1:+17094031 | None:intergenic |
| AGGAAAAGGAAGAAGACCAA+AGG | 0.546451 | 5_1:+17098670 | None:intergenic |
| GAAGCGAAGCACGTGAGACC+GGG | 0.547614 | 5_1:-17098513 | Msa0720840:CDS |
| TCTGTAGGAACGTGATTTGG+AGG | 0.549045 | 5_1:-17097928 | Msa0720840:intron |
| AGTCGTGTACTGTCGCCTGA+TGG | 0.549429 | 5_1:-17094070 | Msa0720840:CDS |
| GGAACCTTCGTGGCCTAAGT+TGG | 0.549948 | 5_1:-17097889 | Msa0720840:CDS |
| GGTTAGCATGGCAACCAAGA+TGG | 0.553217 | 5_1:-17095580 | Msa0720840:CDS |
| GGAGGAGCTTGAACGGAGTG+TGG | 0.554314 | 5_1:-17097910 | Msa0720840:CDS |
| CTGGTATTAGGGGAATAGAG+TGG | 0.554763 | 5_1:-17092500 | Msa0720840:CDS |
| CTGGTGTTGGTTCTCTCCCA+CGG | 0.555391 | 5_1:+17090453 | None:intergenic |
| CATTATCTTTCAGGTTAGCA+TGG | 0.555932 | 5_1:-17095592 | Msa0720840:intron |
| GTGATTTGGAGGAGCTTGAA+CGG | 0.556023 | 5_1:-17097917 | Msa0720840:CDS |
| TGGCACTCAAAGTCTTCGAC+AGG | 0.557047 | 5_1:-17092202 | Msa0720840:intron |
| AAGACCAAAGGGGACAAGGA+AGG | 0.557340 | 5_1:+17098682 | None:intergenic |
| AGACTTCCTCACGCAGAGAA+CGG | 0.558595 | 5_1:+17095784 | None:intergenic |
| TCTTATATCAAACATGCTCA+TGG | 0.559336 | 5_1:-17098817 | Msa0720840:CDS |
| CTTTGGAGAAGATTGTGGAT+AGG | 0.559597 | 5_1:-17097860 | Msa0720840:CDS |
| TTCATCCATAGGAGCTGGAA+AGG | 0.560102 | 5_1:-17096118 | Msa0720840:intron |
| TAGGTGTTTGTGCAATTCCG+TGG | 0.562292 | 5_1:-17090470 | Msa0720840:CDS |
| GTTAAGTTTCAGCTTAGACT+AGG | 0.564326 | 5_1:-17097292 | Msa0720840:CDS |
| ATCTCAATTCTCACCTCAAG+TGG | 0.569275 | 5_1:+17090667 | None:intergenic |
| AGACCAAAGGGGACAAGGAA+GGG | 0.570214 | 5_1:+17098683 | None:intergenic |
| AAGGTTGCCTGTGGCCCACA+TGG | 0.572152 | 5_1:-17094038 | Msa0720840:CDS |
| GTGAAGTGAATCAATGCAGA+AGG | 0.581186 | 5_1:+17098650 | None:intergenic |
| TGGGCCATGGGTAATTACAT+TGG | 0.581788 | 5_1:-17095847 | Msa0720840:CDS |
| AGAAACGGGACACAAGTTCA+GGG | 0.585165 | 5_1:-17090722 | Msa0720840:CDS |
| AGGTGGCAAGCCACCACTTG+AGG | 0.586218 | 5_1:-17090680 | Msa0720840:intron |
| CTTGGCTTGCTTCCTACTGG+AGG | 0.587354 | 5_1:+17094001 | None:intergenic |
| AATCTGTCCTCTGGCAATGG+AGG | 0.587690 | 5_1:+17091582 | None:intergenic |
| CACCGCTGAGAATGGGCCAT+GGG | 0.587887 | 5_1:-17095859 | Msa0720840:CDS |
| GTGTTTGATTGCACACCATG+TGG | 0.591264 | 5_1:+17094023 | None:intergenic |
| CAAGAAGTGCGTTTAAGAAG+AGG | 0.592964 | 5_1:+17098738 | None:intergenic |
| CTATCCACAATCTTCTCCAA+AGG | 0.594046 | 5_1:+17097861 | None:intergenic |
| CCATGGCCCATTCTCAGCGG+TGG | 0.595708 | 5_1:+17095860 | None:intergenic |
| ATCAAAATATGACATTAATG+AGG | 0.597730 | 5_1:-17095054 | Msa0720840:intron |
| CATGCTTACTAGGGAAGATG+AGG | 0.600428 | 5_1:-17092532 | Msa0720840:CDS |
| ACTTCAACACATGCTTACTA+GGG | 0.601967 | 5_1:-17092541 | Msa0720840:CDS |
| GCACATCTTCAATGGCTGAA+CGG | 0.602014 | 5_1:+17097778 | None:intergenic |
| GCATCCAATGTAATTACCCA+TGG | 0.603781 | 5_1:+17095843 | None:intergenic |
| CCACCGCTGAGAATGGGCCA+TGG | 0.605460 | 5_1:-17095860 | Msa0720840:CDS |
| ATTACAATGATACATAATTG+TGG | 0.609498 | 5_1:-17090342 | Msa0720840:three_prime_UTR |
| GGTCTAGTTGCTGGTATTAG+GGG | 0.609680 | 5_1:-17092510 | Msa0720840:CDS |
| TGGTATTAGGGGAATAGAGT+GGG | 0.609977 | 5_1:-17092499 | Msa0720840:CDS |
| TGCAGGATTGGATGATAACA+AGG | 0.611790 | 5_1:-17090979 | Msa0720840:intron |
| TCAATTCTCACCTCAAGTGG+TGG | 0.612691 | 5_1:+17090670 | None:intergenic |
| AGCTGGATACTATAGCTACA+AGG | 0.613270 | 5_1:-17091175 | Msa0720840:intron |
| ATTGAAATTGAGCCAGCTGA+CGG | 0.620834 | 5_1:-17094326 | Msa0720840:CDS |
| ATAGGCAACTGGACTGCCTG+AGG | 0.621371 | 5_1:+17094165 | None:intergenic |
| AAGAAGTGCGTTTAAGAAGA+GGG | 0.621610 | 5_1:+17098739 | None:intergenic |
| AAGCTGATGATTTGACACAT+TGG | 0.621920 | 5_1:-17095109 | Msa0720840:CDS |
| TCGCAACCGTTCTCTGCGTG+AGG | 0.623634 | 5_1:-17095790 | Msa0720840:CDS |
| CATCAGCTTCCAATGCACCC+TGG | 0.627389 | 5_1:+17095123 | None:intergenic |
| TCATACAAAATATGTTCCTG+GGG | 0.636482 | 5_1:-17091661 | Msa0720840:CDS |
| GATGCATTGCTCAGACACAA+TGG | 0.636669 | 5_1:-17090431 | Msa0720840:CDS |
| TAACTCATCAAGGTTGCCTG+TGG | 0.655153 | 5_1:-17094047 | Msa0720840:CDS |
| CAACTACAATAACTATGCAG+AGG | 0.660462 | 5_1:-17095664 | Msa0720840:intron |
| AGGTGTTTGTGCAATTCCGT+GGG | 0.660849 | 5_1:-17090469 | Msa0720840:CDS |
| GCCAGCACGATAAGTTCTGG+CGG | 0.666421 | 5_1:+17092221 | None:intergenic |
| TCTACCAACTTAGGCCACGA+AGG | 0.670141 | 5_1:+17097885 | None:intergenic |
| TATTTAACTCGAGCATCGAG+TGG | 0.674265 | 5_1:-17095753 | Msa0720840:CDS |
| AGTGATTCCTCCATTGCCAG+AGG | 0.676653 | 5_1:-17091589 | Msa0720840:CDS |
| CTTTGCAGACCAAATAAAGG+AGG | 0.678762 | 5_1:-17096742 | Msa0720840:intron |
| AGAGTGAGAATGTGAGTGTG+AGG | 0.679163 | 5_1:+17098787 | None:intergenic |
| ATGCTCGAGTTAAATATGCA+CGG | 0.684859 | 5_1:+17095760 | None:intergenic |
| GCTTCAACAACATCAAAAGG+AGG | 0.685808 | 5_1:+17098531 | None:intergenic |
| TGCAATCAAACACCTCCAGT+AGG | 0.695303 | 5_1:-17094013 | Msa0720840:CDS |
| TACCCATGGCCCATTCTCAG+CGG | 0.698386 | 5_1:+17095857 | None:intergenic |
| GAAAAGGAAGAAGACCAAAG+GGG | 0.709033 | 5_1:+17098672 | None:intergenic |
| ATGCTTACTAGGGAAGATGA+GGG | 0.715837 | 5_1:-17092531 | Msa0720840:CDS |
| TGTTTGATTGCACACCATGT+GGG | 0.716151 | 5_1:+17094024 | None:intergenic |
| AAGTTTAATGACATTCCGTG+AGG | 0.718648 | 5_1:-17093981 | Msa0720840:intron |
| GAAGCCGAACAAGTAAACGA+AGG | 0.720648 | 5_1:+17098615 | None:intergenic |
| CATACAAAATATGTTCCTGG+GGG | 0.748795 | 5_1:-17091660 | Msa0720840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACTATTT+TGG | + | chr5_1:17093750-17093769 | None:intergenic | 10.0% |
| !! | GTATTAAATATTAAATTATG+TGG | + | chr5_1:17094205-17094224 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr5_1:17095679-17095698 | Msa0720840:CDS | 10.0% |
| !! | ATTAATAAGTTATACAAAAA+TGG | - | chr5_1:17096299-17096318 | Msa0720840:intron | 10.0% |
| !!! | TGAATTTTTAATGATTAATA+AGG | + | chr5_1:17096460-17096479 | None:intergenic | 10.0% |
| !!! | AATATAATGTTATTTTACAA+AGG | + | chr5_1:17096744-17096763 | None:intergenic | 10.0% |
| !! | TTCAAATAAAAATATAGAAA+AGG | + | chr5_1:17096948-17096967 | None:intergenic | 10.0% |
| !!! | TTTTTTTCAAAATAAAATTG+TGG | + | chr5_1:17098721-17098740 | None:intergenic | 10.0% |
| !! | ATAATAATGTGTTACAATTA+TGG | + | chr5_1:17091686-17091705 | None:intergenic | 15.0% |
| !!! | TGTATATGTATATATTGATT+TGG | - | chr5_1:17093702-17093721 | Msa0720840:intron | 15.0% |
| !! | TTTGTAATTGCATAAAATAA+AGG | - | chr5_1:17094341-17094360 | Msa0720840:CDS | 15.0% |
| !! | AATACATAAGAGTAAAATAT+GGG | + | chr5_1:17095145-17095164 | None:intergenic | 15.0% |
| !! | AAATACATAAGAGTAAAATA+TGG | + | chr5_1:17095146-17095165 | None:intergenic | 15.0% |
| !! | TTTAAAAGAAAAAAAACGTT+GGG | + | chr5_1:17095361-17095380 | None:intergenic | 15.0% |
| !!! | TTTTAAAAGAAAAAAAACGT+TGG | + | chr5_1:17095362-17095381 | None:intergenic | 15.0% |
| !! | AATTTATGTTGAAAATTATG+AGG | - | chr5_1:17095472-17095491 | Msa0720840:intron | 15.0% |
| !! | TGTATATAGTATTAATTGAA+GGG | - | chr5_1:17095708-17095727 | Msa0720840:CDS | 15.0% |
| !!! | TTTTGAAACAGTTTTTTTTT+TGG | - | chr5_1:17095784-17095803 | Msa0720840:CDS | 15.0% |
| !! | AACTAAAGTTATTAAGAAAT+AGG | + | chr5_1:17096120-17096139 | None:intergenic | 15.0% |
| !! | ATTTCTTAATAACTTTAGTT+TGG | - | chr5_1:17096120-17096139 | Msa0720840:intron | 15.0% |
| !!! | TTTCTTAATAACTTTAGTTT+GGG | - | chr5_1:17096121-17096140 | Msa0720840:intron | 15.0% |
| !!! | TTTATATTGTTACTTACTTA+TGG | + | chr5_1:17096667-17096686 | None:intergenic | 15.0% |
| !! | ACAAAGATATAAACTTTATA+TGG | + | chr5_1:17096691-17096710 | None:intergenic | 15.0% |
| !!! | TATTAACCAAAGTTATTTTT+TGG | + | chr5_1:17097651-17097670 | None:intergenic | 15.0% |
| !!! | TTTATAATTGTCGTTTTTTT+AGG | + | chr5_1:17097818-17097837 | None:intergenic | 15.0% |
| !! | AAATGACTATATATATCTTA+TGG | - | chr5_1:17098031-17098050 | Msa0720840:intron | 15.0% |
| !! | TCTTAGTAAATAAATACAAT+AGG | + | chr5_1:17098272-17098291 | None:intergenic | 15.0% |
| !!! | GGTATAAAGTTTAAAACTTT+TGG | - | chr5_1:17090631-17090650 | Msa0720840:intron | 20.0% |
| !!! | AAAACTTTTGGATTGTTTAT+TGG | - | chr5_1:17090643-17090662 | Msa0720840:intron | 20.0% |
| !!! | AAACTTTTGGATTGTTTATT+GGG | - | chr5_1:17090644-17090663 | Msa0720840:intron | 20.0% |
| !!! | TTTATTGGGTTTTGATTAAT+GGG | - | chr5_1:17090658-17090677 | Msa0720840:intron | 20.0% |
| !!! | TTTCAACTTTTGTTTTGTTT+TGG | - | chr5_1:17090744-17090763 | Msa0720840:intron | 20.0% |
| !!! | TCATTTTCTTAAACAAATAC+CGG | + | chr5_1:17090946-17090965 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGTTTCATTAA+TGG | - | chr5_1:17091066-17091085 | Msa0720840:intron | 20.0% |
| !!! | TGATTTTGTGTTTCATTAAT+GGG | - | chr5_1:17091067-17091086 | Msa0720840:intron | 20.0% |
| !!! | TGATTTTTTGTTTTGACTAA+TGG | - | chr5_1:17091128-17091147 | Msa0720840:intron | 20.0% |
| !!! | GATTTTTTGTTTTGACTAAT+GGG | - | chr5_1:17091129-17091148 | Msa0720840:intron | 20.0% |
| !!! | ATTTTTTGTTTTGACTAATG+GGG | - | chr5_1:17091130-17091149 | Msa0720840:intron | 20.0% |
| !! | CATGAAAATATCTTAAACAA+GGG | + | chr5_1:17091720-17091739 | None:intergenic | 20.0% |
| !!! | CTTGTTTAAGATATTTTCAT+GGG | - | chr5_1:17091719-17091738 | Msa0720840:intron | 20.0% |
| !! | TTGATATTTGACTGATAATA+TGG | - | chr5_1:17092192-17092211 | Msa0720840:intron | 20.0% |
| !!! | TTTTAACAACTGAAAACAAA+TGG | - | chr5_1:17092448-17092467 | Msa0720840:intron | 20.0% |
| !! | CTATATCCTATATCTATTTA+TGG | - | chr5_1:17092548-17092567 | Msa0720840:CDS | 20.0% |
| !! | AAAGGTTATCAGAAAAATTT+GGG | - | chr5_1:17092997-17093016 | Msa0720840:intron | 20.0% |
| !! | TTAAGAACATAATTCTATGT+AGG | - | chr5_1:17093472-17093491 | Msa0720840:intron | 20.0% |
| !!! | TTTTTTCAATTAGCTAGTAT+GGG | - | chr5_1:17093667-17093686 | Msa0720840:intron | 20.0% |
| !! | TTAATTAGATGTTGGAAATT+TGG | + | chr5_1:17093791-17093810 | None:intergenic | 20.0% |
| !! | ATCAAAATATGACATTAATG+AGG | - | chr5_1:17094043-17094062 | Msa0720840:CDS | 20.0% |
| !! | AGAAATAAATTAAGCATATC+TGG | - | chr5_1:17094159-17094178 | Msa0720840:CDS | 20.0% |
| !! | TTAGATAAATTTGGAGAAAA+AGG | + | chr5_1:17094429-17094448 | None:intergenic | 20.0% |
| !! | TCCAAATTTATCTAACTAAT+GGG | - | chr5_1:17094434-17094453 | Msa0720840:intron | 20.0% |
| !! | AAGGTAATAAAATCTTGTAT+TGG | + | chr5_1:17094599-17094618 | None:intergenic | 20.0% |
| !!! | TATTACCTTTAACAATGTTT+TGG | - | chr5_1:17094610-17094629 | Msa0720840:intron | 20.0% |
| !!! | TATTTAAGTTATCTTTGACA+TGG | + | chr5_1:17095294-17095313 | None:intergenic | 20.0% |
| !!! | TTAGACCAAAAATTTAAGTT+CGG | + | chr5_1:17095395-17095414 | None:intergenic | 20.0% |
| !! | GTGTATATAGTATTAATTGA+AGG | - | chr5_1:17095707-17095726 | Msa0720840:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr5_1:17095742-17095761 | Msa0720840:CDS | 20.0% |
| !! | GTATAAAACAAGTGATAATT+TGG | + | chr5_1:17096339-17096358 | None:intergenic | 20.0% |
| !! | TTTATACTAGTAAACTTTCA+AGG | - | chr5_1:17096352-17096371 | Msa0720840:intron | 20.0% |
| !!! | ATATGAAAGATTAGTTTAAC+AGG | + | chr5_1:17096394-17096413 | None:intergenic | 20.0% |
| !! | TTGATTTAGAAAGACTTTAA+TGG | - | chr5_1:17096790-17096809 | Msa0720840:intron | 20.0% |
| !! | TGATTTAGAAAGACTTTAAT+GGG | - | chr5_1:17096791-17096810 | Msa0720840:intron | 20.0% |
| !!! | ATTATTTTACTCTTTGCTAA+TGG | - | chr5_1:17096979-17096998 | Msa0720840:intron | 20.0% |
| !!! | ATAACTATTCTTTTTTCTTG+TGG | - | chr5_1:17097068-17097087 | Msa0720840:intron | 20.0% |
| !! | GGTATAAAAATGTAAAAGAT+TGG | + | chr5_1:17097144-17097163 | None:intergenic | 20.0% |
| !!! | TGTTTTAAAGCAAAAGAAAA+TGG | + | chr5_1:17097165-17097184 | None:intergenic | 20.0% |
| !! | ACTTTGATTGTAATCTATAT+TGG | - | chr5_1:17097378-17097397 | Msa0720840:intron | 20.0% |
| !! | TAATGAGTGAATAAAAAGTA+AGG | + | chr5_1:17097692-17097711 | None:intergenic | 20.0% |
| !!! | TAAAATAGTTGATAAAGACA+AGG | - | chr5_1:17097721-17097740 | Msa0720840:intron | 20.0% |
| !!! | CTCATTTTATTTCATTTTTC+TGG | - | chr5_1:17097873-17097892 | Msa0720840:CDS | 20.0% |
| !!! | TTGTATTGCTTTGATAATTA+TGG | - | chr5_1:17097951-17097970 | Msa0720840:intron | 20.0% |
| !! | TTGTATATTTACATTTACAC+AGG | - | chr5_1:17098345-17098364 | Msa0720840:intron | 20.0% |
| !! | ATTACAATGATACATAATTG+TGG | - | chr5_1:17098755-17098774 | Msa0720840:CDS | 20.0% |
| !!! | GTTTATTGGGTTTTGATTAA+TGG | - | chr5_1:17090657-17090676 | Msa0720840:intron | 25.0% |
| !!! | TTTTGTTTTGGATTGTTTAC+TGG | - | chr5_1:17090756-17090775 | Msa0720840:intron | 25.0% |
| !!! | TTTGTTTTGGATTGTTTACT+GGG | - | chr5_1:17090757-17090776 | Msa0720840:intron | 25.0% |
| !! | TTTGATTAATGGCTTTTGAT+TGG | - | chr5_1:17090781-17090800 | Msa0720840:intron | 25.0% |
| !!! | TGATTTTGTGTTTTGATTAG+TGG | - | chr5_1:17090853-17090872 | Msa0720840:intron | 25.0% |
| !!! | GATTTTGTGTTTTGATTAGT+GGG | - | chr5_1:17090854-17090873 | Msa0720840:intron | 25.0% |
| !!! | GGTTTTGTATTTAGCTTAAT+TGG | - | chr5_1:17091098-17091117 | Msa0720840:intron | 25.0% |
| ! | TTTAGTATTACTATGATGAC+TGG | - | chr5_1:17091429-17091448 | Msa0720840:intron | 25.0% |
| ! | TGAATTGCATGTTATCAAAT+AGG | - | chr5_1:17091484-17091503 | Msa0720840:intron | 25.0% |
| ! | GAATTGCATGTTATCAAATA+GGG | - | chr5_1:17091485-17091504 | Msa0720840:intron | 25.0% |
| ! | AATTGACAATACTGATGATT+TGG | - | chr5_1:17091621-17091640 | Msa0720840:CDS | 25.0% |
| ! | CCATGAAAATATCTTAAACA+AGG | + | chr5_1:17091721-17091740 | None:intergenic | 25.0% |
| !!! | CCTTGTTTAAGATATTTTCA+TGG | - | chr5_1:17091718-17091737 | Msa0720840:intron | 25.0% |
| !!! | GTATTTTATTTCTCCTGTAT+TGG | - | chr5_1:17091965-17091984 | Msa0720840:intron | 25.0% |
| ! | ATAAAATAACATGCCAATAC+AGG | + | chr5_1:17091981-17092000 | None:intergenic | 25.0% |
| ! | TAGATTTATAACAGGTAAGA+TGG | - | chr5_1:17092056-17092075 | Msa0720840:intron | 25.0% |
| ! | TTAGAGTAATTCATTGTCTT+TGG | - | chr5_1:17092287-17092306 | Msa0720840:CDS | 25.0% |
| ! | ACAGTTTAACAAAATTGAAC+AGG | - | chr5_1:17092418-17092437 | Msa0720840:intron | 25.0% |
| ! | TTGCTTCCATAAATAGATAT+AGG | + | chr5_1:17092557-17092576 | None:intergenic | 25.0% |
| ! | TTGTCCTATTTATTTGTAAG+CGG | + | chr5_1:17092659-17092678 | None:intergenic | 25.0% |
| ! | GAAAGGTTATCAGAAAAATT+TGG | - | chr5_1:17092996-17093015 | Msa0720840:intron | 25.0% |
| ! | AAGGTTATCAGAAAAATTTG+GGG | - | chr5_1:17092998-17093017 | Msa0720840:intron | 25.0% |
| !! | AATGAGCTTTTCAAACTTTT+TGG | + | chr5_1:17093042-17093061 | None:intergenic | 25.0% |
| !!! | GTTTTTTCAATTAGCTAGTA+TGG | - | chr5_1:17093666-17093685 | Msa0720840:intron | 25.0% |
| !!! | TTTTTCAATTAGCTAGTATG+GGG | - | chr5_1:17093668-17093687 | Msa0720840:intron | 25.0% |
| ! | TGGAATAGTAAATGACAATA+AGG | + | chr5_1:17093730-17093749 | None:intergenic | 25.0% |
| ! | ATGTCTGATTAATTAGATGT+TGG | + | chr5_1:17093799-17093818 | None:intergenic | 25.0% |
| !! | GGTCTTTAGAAAATTTCTTA+AGG | + | chr5_1:17093956-17093975 | None:intergenic | 25.0% |
| !!! | TAAGAAATTTTCTAAAGACC+AGG | - | chr5_1:17093956-17093975 | Msa0720840:intron | 25.0% |
| !!! | AAGAAATTTTCTAAAGACCA+GGG | - | chr5_1:17093957-17093976 | Msa0720840:intron | 25.0% |
| !! | AAAGACACTTTAAGAACATA+AGG | - | chr5_1:17094103-17094122 | Msa0720840:CDS | 25.0% |
| !!! | ACTTTAAGAACATAAGGTTT+TGG | - | chr5_1:17094109-17094128 | Msa0720840:CDS | 25.0% |
| !! | CAATATTTTATACAGCTTGA+AGG | - | chr5_1:17094255-17094274 | Msa0720840:intron | 25.0% |
| ! | TTTGAAAAACTGTTATGTCA+AGG | - | chr5_1:17094283-17094302 | Msa0720840:intron | 25.0% |
| ! | CTCCAAATTTATCTAACTAA+TGG | - | chr5_1:17094433-17094452 | Msa0720840:intron | 25.0% |
| ! | TCCCATTAGTTAGATAAATT+TGG | + | chr5_1:17094438-17094457 | None:intergenic | 25.0% |
| ! | AAAACCATATACTATAACTG+GGG | + | chr5_1:17094542-17094561 | None:intergenic | 25.0% |
| ! | GAAAACCATATACTATAACT+GGG | + | chr5_1:17094543-17094562 | None:intergenic | 25.0% |
| ! | AGAAAACCATATACTATAAC+TGG | + | chr5_1:17094544-17094563 | None:intergenic | 25.0% |
| !!! | TCTTGTATTGGTTAGTAAAT+TGG | + | chr5_1:17094587-17094606 | None:intergenic | 25.0% |
| ! | AAAGACCAAAACATTGTTAA+AGG | + | chr5_1:17094618-17094637 | None:intergenic | 25.0% |
| ! | ACAAATGATTACTGTTATTC+AGG | - | chr5_1:17094870-17094889 | Msa0720840:intron | 25.0% |
| ! | TCAAAATAAAAATAGGCAAC+TGG | + | chr5_1:17094946-17094965 | None:intergenic | 25.0% |
| ! | GTAGGGATCAAAATAAAAAT+AGG | + | chr5_1:17094953-17094972 | None:intergenic | 25.0% |
| ! | TTAATTAAAGTGGCACTAAT+GGG | + | chr5_1:17095322-17095341 | None:intergenic | 25.0% |
| ! | ATTAATTAAAGTGGCACTAA+TGG | + | chr5_1:17095323-17095342 | None:intergenic | 25.0% |
| ! | TTAGATAACAGAAAAGTAAC+AGG | - | chr5_1:17095496-17095515 | Msa0720840:intron | 25.0% |
| ! | AAGAATAAGGACTTTGAATA+TGG | - | chr5_1:17095519-17095538 | Msa0720840:CDS | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | + | chr5_1:17095563-17095582 | None:intergenic | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | - | chr5_1:17095564-17095583 | Msa0720840:CDS | 25.0% |
| ! | GCATTAATTAAAAGAAAGAG+AGG | - | chr5_1:17095610-17095629 | Msa0720840:intron | 25.0% |
| ! | AATAGTTGATTGGGATAATT+TGG | + | chr5_1:17095646-17095665 | None:intergenic | 25.0% |
| ! | AAATTATCCCAATCAACTAT+TGG | - | chr5_1:17095645-17095664 | Msa0720840:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+GGG | + | chr5_1:17095655-17095674 | None:intergenic | 25.0% |
| ! | AAAACAAACCAATAGTTGAT+TGG | + | chr5_1:17095656-17095675 | None:intergenic | 25.0% |
| ! | GTTAAAGATTTAAACCTGAA+TGG | - | chr5_1:17096202-17096221 | Msa0720840:intron | 25.0% |
| ! | AATATTGATATGTACCATTC+AGG | + | chr5_1:17096219-17096238 | None:intergenic | 25.0% |
| ! | GTTTATATCTTTGTCTTGAA+TGG | - | chr5_1:17096697-17096716 | Msa0720840:CDS | 25.0% |
| !!! | ATTGCAAAACATTTTGAAAC+TGG | - | chr5_1:17096815-17096834 | Msa0720840:intron | 25.0% |
| !!! | TTGCAAAACATTTTGAAACT+GGG | - | chr5_1:17096816-17096835 | Msa0720840:intron | 25.0% |
| !!! | TTTCTTTTGCTTTAAAACAG+TGG | - | chr5_1:17097166-17097185 | Msa0720840:intron | 25.0% |
| ! | AACAGACACAATAGAAAAAA+AGG | + | chr5_1:17097226-17097245 | None:intergenic | 25.0% |
| ! | TTCATACAAAATATGTTCCT+GGG | - | chr5_1:17097435-17097454 | Msa0720840:intron | 25.0% |
| ! | CACAAACCAAAAAATAACTT+TGG | - | chr5_1:17097642-17097661 | Msa0720840:intron | 25.0% |
| !!! | TGGTTACGTTAACTATTTTT+TGG | + | chr5_1:17097756-17097775 | None:intergenic | 25.0% |
| !!! | CGTTTTGTTTCATATATTGA+AGG | - | chr5_1:17097975-17097994 | Msa0720840:intron | 25.0% |
| ! | ATTAAGAAAAACTGTCGATA+AGG | - | chr5_1:17098152-17098171 | Msa0720840:intron | 25.0% |
| !!! | GCATGTTTTTAGAAAAATAG+AGG | + | chr5_1:17098225-17098244 | None:intergenic | 25.0% |
| ! | ATACATAATTGTGGTTGTTA+AGG | - | chr5_1:17098764-17098783 | Msa0720840:CDS | 25.0% |
| TGAGCATGTTTGATATAAGA+AGG | + | chr5_1:17090280-17090299 | None:intergenic | 30.0% | |
| TCTTATATCAAACATGCTCA+TGG | - | chr5_1:17090280-17090299 | Msa0720840:three_prime_UTR | 30.0% | |
| AAAACAAACTCCTTCAAAAG+AGG | + | chr5_1:17090545-17090564 | None:intergenic | 30.0% | |
| !! | TTTGATTAATGGGTGTTGAT+TGG | - | chr5_1:17090668-17090687 | Msa0720840:intron | 30.0% |
| !!! | TGTTGATTGGTTTTGTGTTT+TGG | - | chr5_1:17090681-17090700 | Msa0720840:CDS | 30.0% |
| !!! | TGGTTTTGTGTTTTGGTTAA+TGG | - | chr5_1:17090688-17090707 | Msa0720840:CDS | 30.0% |
| !!! | GGTTTTGTGTTTTGGTTAAT+GGG | - | chr5_1:17090689-17090708 | Msa0720840:CDS | 30.0% |
| !!! | TTTCGATTGGTTTTGTGTTT+GGG | - | chr5_1:17090712-17090731 | Msa0720840:CDS | 30.0% |
| !!! | GTTTACTGGGTTTTGATTAA+TGG | - | chr5_1:17090770-17090789 | Msa0720840:intron | 30.0% |
| !!! | GATTGGTTTTGTGTTTTGAT+TGG | - | chr5_1:17090798-17090817 | Msa0720840:intron | 30.0% |
| !!! | GATTTTGTGTTTTGGTTTGT+GGG | - | chr5_1:17090823-17090842 | Msa0720840:intron | 30.0% |
| TTGAATGTAATCACATGTGT+CGG | - | chr5_1:17090971-17090990 | Msa0720840:intron | 30.0% | |
| ! | ATGCATTCAATCAAAAGTGT+CGG | - | chr5_1:17091026-17091045 | Msa0720840:CDS | 30.0% |
| ! | TTTCATTAATGGGTCTTGAT+TGG | - | chr5_1:17091077-17091096 | Msa0720840:intron | 30.0% |
| TAATCATCTCAAAGCTGTTA+AGG | - | chr5_1:17091283-17091302 | Msa0720840:intron | 30.0% | |
| !!! | GGTACTTTTGGTTTTTGTTT+TGG | - | chr5_1:17091343-17091362 | Msa0720840:intron | 30.0% |
| ATGTGTAATTGTGCATTTCT+CGG | - | chr5_1:17091376-17091395 | Msa0720840:intron | 30.0% | |
| !! | ATACTGATGATTTGGTTTGT+TGG | - | chr5_1:17091629-17091648 | Msa0720840:CDS | 30.0% |
| GTCATCATATGCTAAAATTG+AGG | + | chr5_1:17091655-17091674 | None:intergenic | 30.0% | |
| !! | GTTTAAGATATTTTCATGGG+TGG | - | chr5_1:17091722-17091741 | Msa0720840:intron | 30.0% |
| !! | ATTGCTGTAATTTTGTTTGC+AGG | - | chr5_1:17091774-17091793 | Msa0720840:intron | 30.0% |
| TCAGCTTCTAGATTTATAAC+AGG | - | chr5_1:17092048-17092067 | Msa0720840:intron | 30.0% | |
| TGGAGAATTGTGAAAAATGA+TGG | - | chr5_1:17092076-17092095 | Msa0720840:intron | 30.0% | |
| !! | AAAAATGATGGATGTGTAGT+TGG | - | chr5_1:17092088-17092107 | Msa0720840:intron | 30.0% |
| ! | GTGTGAAGTTTTCTGATTTA+CGG | - | chr5_1:17092110-17092129 | Msa0720840:intron | 30.0% |
| TTAAATTTCCGCTTCATTGT+CGG | - | chr5_1:17092146-17092165 | Msa0720840:intron | 30.0% | |
| ATCAGTCAAATATCAACAAG+TGG | + | chr5_1:17092188-17092207 | None:intergenic | 30.0% | |
| ! | TGAATTACTCTAAGAACAAG+TGG | + | chr5_1:17092280-17092299 | None:intergenic | 30.0% |
| CTGAAAACAAATGGAAATTG+TGG | - | chr5_1:17092457-17092476 | Msa0720840:CDS | 30.0% | |
| !!! | TTCCCATTTTTTCACCATTT+AGG | - | chr5_1:17092503-17092522 | Msa0720840:CDS | 30.0% |
| !!! | TCCCATTTTTTCACCATTTA+GGG | - | chr5_1:17092504-17092523 | Msa0720840:CDS | 30.0% |
| ACCCTAAATGGTGAAAAAAT+GGG | + | chr5_1:17092508-17092527 | None:intergenic | 30.0% | |
| TAGTACATAATCACCCTAAA+TGG | + | chr5_1:17092520-17092539 | None:intergenic | 30.0% | |
| ! | ATTTAGGGTGATTATGTACT+AGG | - | chr5_1:17092519-17092538 | Msa0720840:CDS | 30.0% |
| ! | AATGCCGCTTACAAATAAAT+AGG | - | chr5_1:17092652-17092671 | Msa0720840:intron | 30.0% |
| ! | GAGATTTTCAAAAATCCCAA+AGG | - | chr5_1:17092719-17092738 | Msa0720840:intron | 30.0% |
| ACATATACTGCCAATGAAAT+TGG | + | chr5_1:17092771-17092790 | None:intergenic | 30.0% | |
| ! | TCACTACATTTGGTTTAACT+GGG | + | chr5_1:17092824-17092843 | None:intergenic | 30.0% |
| CAAAATCTTGTCACTACATT+TGG | + | chr5_1:17092834-17092853 | None:intergenic | 30.0% | |
| AAAGCTCATTACAGATAAGA+AGG | - | chr5_1:17093052-17093071 | Msa0720840:intron | 30.0% | |
| ! | TTTGAGTTCTGATTACTTGA+TGG | - | chr5_1:17093189-17093208 | Msa0720840:intron | 30.0% |
| TACTTGATGGAAAAAAATGC+AGG | - | chr5_1:17093202-17093221 | Msa0720840:intron | 30.0% | |
| ACTTGATGGAAAAAAATGCA+GGG | - | chr5_1:17093203-17093222 | Msa0720840:intron | 30.0% | |
| AATTCTATGTAGGTTACTGA+TGG | - | chr5_1:17093482-17093501 | Msa0720840:intron | 30.0% | |
| TGTTTGCTTCATGATTTGAA+TGG | - | chr5_1:17093636-17093655 | Msa0720840:intron | 30.0% | |
| GTTTGCTTCATGATTTGAAT+GGG | - | chr5_1:17093637-17093656 | Msa0720840:intron | 30.0% | |
| AATTAAGCATATCTGGAAGA+AGG | - | chr5_1:17094166-17094185 | Msa0720840:CDS | 30.0% | |
| CAAATGCAGGAACAAAATAA+CGG | + | chr5_1:17094384-17094403 | None:intergenic | 30.0% | |
| TGGCAAAAATATTCAAATGC+AGG | + | chr5_1:17094397-17094416 | None:intergenic | 30.0% | |
| GGATATCCATCTTAGTTAAA+GGG | - | chr5_1:17094455-17094474 | Msa0720840:intron | 30.0% | |
| AAGTACAGTGAACAGAATTA+TGG | + | chr5_1:17094487-17094506 | None:intergenic | 30.0% | |
| AAACCATATACTATAACTGG+GGG | + | chr5_1:17094541-17094560 | None:intergenic | 30.0% | |
| TGGTTAGTAAATTGGTCAAT+GGG | + | chr5_1:17094579-17094598 | None:intergenic | 30.0% | |
| TTGGTTAGTAAATTGGTCAA+TGG | + | chr5_1:17094580-17094599 | None:intergenic | 30.0% | |
| ! | TTGTAACTTTTAATCTGCCT+TGG | - | chr5_1:17094641-17094660 | Msa0720840:intron | 30.0% |
| CATTTGGCAGAGAAAAAAAT+GGG | + | chr5_1:17094710-17094729 | None:intergenic | 30.0% | |
| ACATTTGGCAGAGAAAAAAA+TGG | + | chr5_1:17094711-17094730 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTGCCAAATGTTA+TGG | - | chr5_1:17094713-17094732 | Msa0720840:intron | 30.0% |
| ATAAAAGGGAGTCTAATTAC+CGG | + | chr5_1:17094804-17094823 | None:intergenic | 30.0% | |
| AGAACCACAGATGAATAAAA+GGG | + | chr5_1:17094818-17094837 | None:intergenic | 30.0% | |
| AAGAACCACAGATGAATAAA+AGG | + | chr5_1:17094819-17094838 | None:intergenic | 30.0% | |
| ! | TGATTACTGTTATTCAGGTT+TGG | - | chr5_1:17094875-17094894 | Msa0720840:intron | 30.0% |
| TGTACGAAAAAAAAGTTGTC+TGG | - | chr5_1:17095201-17095220 | Msa0720840:intron | 30.0% | |
| GTACGAAAAAAAAGTTGTCT+GGG | - | chr5_1:17095202-17095221 | Msa0720840:intron | 30.0% | |
| ! | TTACAGGTAGCTGTATTTTA+TGG | - | chr5_1:17095446-17095465 | Msa0720840:intron | 30.0% |
| GAAAAGTAACAGGAAGAATA+AGG | - | chr5_1:17095506-17095525 | Msa0720840:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+TGG | - | chr5_1:17095810-17095829 | Msa0720840:CDS | 30.0% |
| ! | CTTTGATCTTTTGTTCTTGA+TGG | + | chr5_1:17095906-17095925 | None:intergenic | 30.0% |
| TATAATATCACACCATCATC+AGG | + | chr5_1:17096037-17096056 | None:intergenic | 30.0% | |
| TTCACACTTCAATTGAAAAC+AGG | + | chr5_1:17096173-17096192 | None:intergenic | 30.0% | |
| !! | TGAAAGATTAGTTTAACAGG+AGG | + | chr5_1:17096391-17096410 | None:intergenic | 30.0% |
| TGAATTACCTTCTCAGTTTA+TGG | - | chr5_1:17096628-17096647 | Msa0720840:intron | 30.0% | |
| !!! | TGCAAAACATTTTGAAACTG+GGG | - | chr5_1:17096817-17096836 | Msa0720840:intron | 30.0% |
| !! | ATTCCAGAAATCTGTTTTGA+AGG | + | chr5_1:17097038-17097057 | None:intergenic | 30.0% |
| CTTCATACAAAATATGTTCC+TGG | - | chr5_1:17097434-17097453 | Msa0720840:intron | 30.0% | |
| TCATACAAAATATGTTCCTG+GGG | - | chr5_1:17097436-17097455 | Msa0720840:intron | 30.0% | |
| ATCTTAAAAGCCATGTACAA+TGG | + | chr5_1:17097615-17097634 | None:intergenic | 30.0% | |
| !! | TTAGTCGTTTTCAAAACAGA+TGG | + | chr5_1:17097776-17097795 | None:intergenic | 30.0% |
| ! | TTCTGGATTTTGCATTTGTT+AGG | - | chr5_1:17097890-17097909 | Msa0720840:CDS | 30.0% |
| !! | AGGATTTTGCTTTTCTCTTT+AGG | - | chr5_1:17098172-17098191 | Msa0720840:intron | 30.0% |
| !! | GGATTTTGCTTTTCTCTTTA+GGG | - | chr5_1:17098173-17098192 | Msa0720840:intron | 30.0% |
| !!! | CTAGGATTTTTTACCAACTT+TGG | - | chr5_1:17098562-17098581 | Msa0720840:CDS | 30.0% |
| CTTGAACATTTAATGCAATG+TGG | - | chr5_1:17098594-17098613 | Msa0720840:CDS | 30.0% | |
| !!! | GCAATGTGGTTTTTTTATGT+AGG | - | chr5_1:17098608-17098627 | Msa0720840:CDS | 30.0% |
| ! | AAGAAGTGCGTTTAAGAAGA+GGG | + | chr5_1:17090361-17090380 | None:intergenic | 35.0% |
| AGAATGCTTAGGGTTGAAAA+AGG | + | chr5_1:17090387-17090406 | None:intergenic | 35.0% | |
| GGGATTTATGAGAATGCTTA+GGG | + | chr5_1:17090397-17090416 | None:intergenic | 35.0% | |
| AGGGATTTATGAGAATGCTT+AGG | + | chr5_1:17090398-17090417 | None:intergenic | 35.0% | |
| TGAATCAATGCAGAAGGAAA+AGG | + | chr5_1:17090444-17090463 | None:intergenic | 35.0% | |
| TTCACCTTCGTTTACTTGTT+CGG | - | chr5_1:17090478-17090497 | Msa0720840:intron | 35.0% | |
| ! | TGAAGCTAATCCTCTTTTGA+AGG | - | chr5_1:17090532-17090551 | Msa0720840:intron | 35.0% |
| TTCGCTTCAACAACATCAAA+AGG | + | chr5_1:17090572-17090591 | None:intergenic | 35.0% | |
| !! | TTTGGTTAATGGGTTTCGAT+TGG | - | chr5_1:17090699-17090718 | Msa0720840:CDS | 35.0% |
| !!! | GTTTCGATTGGTTTTGTGTT+TGG | - | chr5_1:17090711-17090730 | Msa0720840:CDS | 35.0% |
| !!! | TTCGATTGGTTTTGTGTTTG+GGG | - | chr5_1:17090713-17090732 | Msa0720840:CDS | 35.0% |
| !!! | TGGTTTTGTGTTTTGATTGG+TGG | - | chr5_1:17090801-17090820 | Msa0720840:intron | 35.0% |
| !!! | GATTGGTGGATTTTGTGTTT+TGG | - | chr5_1:17090815-17090834 | Msa0720840:intron | 35.0% |
| !!! | GGATTTTGTGTTTTGGTTTG+TGG | - | chr5_1:17090822-17090841 | Msa0720840:intron | 35.0% |
| TGTTAGTGCTTCATAGATCA+AGG | + | chr5_1:17090880-17090899 | None:intergenic | 35.0% | |
| !! | CTTTTGATTGAATGCATGTC+CGG | + | chr5_1:17091023-17091042 | None:intergenic | 35.0% |
| TGTGTATCATGAAACAATCG+TGG | + | chr5_1:17091544-17091563 | None:intergenic | 35.0% | |
| GTTAAGTTTCAGCTTAGACT+AGG | - | chr5_1:17091805-17091824 | Msa0720840:intron | 35.0% | |
| ! | GCTTTGAACGCATTATAAAG+AGG | + | chr5_1:17091841-17091860 | None:intergenic | 35.0% |
| TGAAAGAACAGGCTGTTATT+GGG | + | chr5_1:17092249-17092268 | None:intergenic | 35.0% | |
| ! | TTACTCTAAGAACAAGTGGA+AGG | + | chr5_1:17092276-17092295 | None:intergenic | 35.0% |
| TACCTTTGCAGACCAAATAA+AGG | - | chr5_1:17092352-17092371 | Msa0720840:intron | 35.0% | |
| TAAGAACTGCCTCCTTTATT+TGG | + | chr5_1:17092367-17092386 | None:intergenic | 35.0% | |
| ATAAAGGAGGCAGTTCTTAA+TGG | - | chr5_1:17092368-17092387 | Msa0720840:intron | 35.0% | |
| CACCCTAAATGGTGAAAAAA+TGG | + | chr5_1:17092509-17092528 | None:intergenic | 35.0% | |
| AGCAACATGAACTGGTAATA+TGG | - | chr5_1:17092678-17092697 | Msa0720840:intron | 35.0% | |
| GCCTGAAATTCCAATTTCAT+TGG | - | chr5_1:17092758-17092777 | Msa0720840:intron | 35.0% | |
| GCCAATGAAATTGGAATTTC+AGG | + | chr5_1:17092762-17092781 | None:intergenic | 35.0% | |
| ! | GTCACTACATTTGGTTTAAC+TGG | + | chr5_1:17092825-17092844 | None:intergenic | 35.0% |
| CTTCAGAAATTTGAGCACAT+TGG | + | chr5_1:17092877-17092896 | None:intergenic | 35.0% | |
| !! | CTCAAATTTCTGAAGCAAAG+TGG | - | chr5_1:17092882-17092901 | Msa0720840:intron | 35.0% |
| GTGTGTGTGTAATATTGTCA+TGG | - | chr5_1:17092955-17092974 | Msa0720840:intron | 35.0% | |
| ATTGTCATGGTTTCATCCAT+AGG | - | chr5_1:17092968-17092987 | Msa0720840:intron | 35.0% | |
| ACAGATAAGAAGGAGATTGA+AGG | - | chr5_1:17093062-17093081 | Msa0720840:intron | 35.0% | |
| CTTGATGGAAAAAAATGCAG+GGG | - | chr5_1:17093204-17093223 | Msa0720840:intron | 35.0% | |
| TGCATGACTGCAATATAACT+TGG | + | chr5_1:17093281-17093300 | None:intergenic | 35.0% | |
| ATGCTCGAGTTAAATATGCA+CGG | + | chr5_1:17093340-17093359 | None:intergenic | 35.0% | |
| !!! | TCGAGCAAATTTTAAAGCTG+AGG | - | chr5_1:17093390-17093409 | Msa0720840:intron | 35.0% |
| !!! | GCAAATTTTAAAGCTGAGGT+TGG | - | chr5_1:17093394-17093413 | Msa0720840:intron | 35.0% |
| ! | TTTAAAGCTGAGGTTGGAAA+AGG | - | chr5_1:17093400-17093419 | Msa0720840:intron | 35.0% |
| GTTATTGTAGTTGAGAAGCT+TGG | + | chr5_1:17093426-17093445 | None:intergenic | 35.0% | |
| CAACTACAATAACTATGCAG+AGG | - | chr5_1:17093433-17093452 | Msa0720840:intron | 35.0% | |
| TACTGATGGCATTATCTTTC+AGG | - | chr5_1:17093496-17093515 | Msa0720840:intron | 35.0% | |
| !! | CATTATCTTTCAGGTTAGCA+TGG | - | chr5_1:17093505-17093524 | Msa0720840:intron | 35.0% |
| TTTATCAACAGTTGCCATCT+TGG | + | chr5_1:17093534-17093553 | None:intergenic | 35.0% | |
| ATATCTGCAAGGAAGAAAGA+TGG | + | chr5_1:17093927-17093946 | None:intergenic | 35.0% | |
| ATCTTTCTTCCTTGCAGATA+TGG | - | chr5_1:17093926-17093945 | Msa0720840:intron | 35.0% | |
| AAGCTGATGATTTGACACAT+TGG | - | chr5_1:17093988-17094007 | Msa0720840:CDS | 35.0% | |
| AGCTGATGATTTGACACATT+GGG | - | chr5_1:17093989-17094008 | Msa0720840:CDS | 35.0% | |
| GGGATATCCATCTTAGTTAA+AGG | - | chr5_1:17094454-17094473 | Msa0720840:intron | 35.0% | |
| AGCTTTCCCTTTAACTAAGA+TGG | + | chr5_1:17094464-17094483 | None:intergenic | 35.0% | |
| AACCATATACTATAACTGGG+GGG | + | chr5_1:17094540-17094559 | None:intergenic | 35.0% | |
| GGTTAGTAAATTGGTCAATG+GGG | + | chr5_1:17094578-17094597 | None:intergenic | 35.0% | |
| !!! | CATCTGCTATTTTGTCTCAT+AGG | - | chr5_1:17094674-17094693 | Msa0720840:intron | 35.0% |
| AAGAGTCCATCCATAACATT+TGG | + | chr5_1:17094726-17094745 | None:intergenic | 35.0% | |
| ! | GACCTTGCAAAAACACTTTT+TGG | - | chr5_1:17094747-17094766 | Msa0720840:intron | 35.0% |
| !!! | TGCCAAAAAGTGTTTTTGCA+AGG | + | chr5_1:17094752-17094771 | None:intergenic | 35.0% |
| TCACGGAATGTCATTAAACT+TGG | + | chr5_1:17095117-17095136 | None:intergenic | 35.0% | |
| AAGTTTAATGACATTCCGTG+AGG | - | chr5_1:17095116-17095135 | Msa0720840:CDS | 35.0% | |
| ! | GTAAAATATGGGTTACCTCA+CGG | + | chr5_1:17095134-17095153 | None:intergenic | 35.0% |
| ATCATGTGAAGACCAGATAA+TGG | + | chr5_1:17095258-17095277 | None:intergenic | 35.0% | |
| AGAAAAAAAACGTTGGGAAG+TGG | + | chr5_1:17095355-17095374 | None:intergenic | 35.0% | |
| !!! | AGGTGCCGAACTTAAATTTT+TGG | - | chr5_1:17095387-17095406 | Msa0720840:intron | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | + | chr5_1:17095559-17095578 | None:intergenic | 35.0% |
| AGAAATGCTTAACCACCAAA+AGG | - | chr5_1:17095860-17095879 | Msa0720840:CDS | 35.0% | |
| !!! | CTTTGGTTGCTTTTTCCTTT+TGG | + | chr5_1:17095878-17095897 | None:intergenic | 35.0% |
| ! | TGTTCTTGATGGTTAAGCTT+TGG | + | chr5_1:17095895-17095914 | None:intergenic | 35.0% |
| AACTTTGCTTATGTCTTGAG+TGG | + | chr5_1:17095940-17095959 | None:intergenic | 35.0% | |
| ! | TTTGTCTTCTCCTTTTTCTC+AGG | - | chr5_1:17096502-17096521 | Msa0720840:intron | 35.0% |
| ACTTCAACACATGCTTACTA+GGG | - | chr5_1:17096556-17096575 | Msa0720840:intron | 35.0% | |
| ! | CAGTTTTCCATAAACTGAGA+AGG | + | chr5_1:17096638-17096657 | None:intergenic | 35.0% |
| CTTCTCAGTTTATGGAAAAC+TGG | - | chr5_1:17096636-17096655 | Msa0720840:intron | 35.0% | |
| TATCTTTGTCTTGAATGGAC+AGG | - | chr5_1:17096702-17096721 | Msa0720840:CDS | 35.0% | |
| ACAGGTCAGTATGAATGAAT+TGG | - | chr5_1:17096913-17096932 | Msa0720840:intron | 35.0% | |
| GTTCCTTCAAAACAGATTTC+TGG | - | chr5_1:17097032-17097051 | Msa0720840:intron | 35.0% | |
| TAAGCTTTCTGCATCAGTAT+TGG | - | chr5_1:17097104-17097123 | Msa0720840:intron | 35.0% | |
| !!! | TGCATCAGTATTGGTACTTT+TGG | - | chr5_1:17097113-17097132 | Msa0720840:intron | 35.0% |
| !!! | GCATCAGTATTGGTACTTTT+GGG | - | chr5_1:17097114-17097133 | Msa0720840:intron | 35.0% |
| TGATTCAAACCCATCTTTCT+TGG | - | chr5_1:17097325-17097344 | Msa0720840:intron | 35.0% | |
| GATTCAAACCCATCTTTCTT+GGG | - | chr5_1:17097326-17097345 | Msa0720840:intron | 35.0% | |
| TAACACAACCCAAGAAAGAT+GGG | + | chr5_1:17097337-17097356 | None:intergenic | 35.0% | |
| AAAATTTGCAACTGTCGATC+TGG | - | chr5_1:17097409-17097428 | Msa0720840:intron | 35.0% | |
| CATACAAAATATGTTCCTGG+GGG | - | chr5_1:17097437-17097456 | Msa0720840:intron | 35.0% | |
| ATATATGACTGAAGCTGCAA+AGG | + | chr5_1:17097541-17097560 | None:intergenic | 35.0% | |
| AGCTTCAGTCATATATTTGC+AGG | - | chr5_1:17097545-17097564 | Msa0720840:intron | 35.0% | |
| ! | AATCAACAAAGAGGTATAGG+AGG | + | chr5_1:17097580-17097599 | None:intergenic | 35.0% |
| ! | CGTAATCAACAAAGAGGTAT+AGG | + | chr5_1:17097583-17097602 | None:intergenic | 35.0% |
| !! | TGGATTTTGCATTTGTTAGG+TGG | - | chr5_1:17097893-17097912 | Msa0720840:CDS | 35.0% |
| TGTCATATAGTCCACAGAAA+AGG | - | chr5_1:17098005-17098024 | Msa0720840:intron | 35.0% | |
| GTCATATAGTCCACAGAAAA+GGG | - | chr5_1:17098006-17098025 | Msa0720840:intron | 35.0% | |
| TCATATAGTCCACAGAAAAG+GGG | - | chr5_1:17098007-17098026 | Msa0720840:intron | 35.0% | |
| TGAATTTGTGTGTTATGCAG+TGG | - | chr5_1:17098054-17098073 | Msa0720840:intron | 35.0% | |
| GAATTTGTGTGTTATGCAGT+GGG | - | chr5_1:17098055-17098074 | Msa0720840:intron | 35.0% | |
| ! | CATATGCATGTGACAGATTT+TGG | + | chr5_1:17098534-17098553 | None:intergenic | 35.0% |
| AAATCTGTCACATGCATATG+TGG | - | chr5_1:17098534-17098553 | Msa0720840:CDS | 35.0% | |
| AATCTGTCACATGCATATGT+GGG | - | chr5_1:17098535-17098554 | Msa0720840:CDS | 35.0% | |
| ! | ATGAGACACGAAGCACTTAT+TGG | - | chr5_1:17090251-17090270 | Msa0720840:three_prime_UTR | 40.0% |
| ! | CAAGAAGTGCGTTTAAGAAG+AGG | + | chr5_1:17090362-17090381 | None:intergenic | 40.0% |
| GAAAAGGAAGAAGACCAAAG+GGG | + | chr5_1:17090428-17090447 | None:intergenic | 40.0% | |
| GGAAAAGGAAGAAGACCAAA+GGG | + | chr5_1:17090429-17090448 | None:intergenic | 40.0% | |
| AGGAAAAGGAAGAAGACCAA+AGG | + | chr5_1:17090430-17090449 | None:intergenic | 40.0% | |
| GTGAAGTGAATCAATGCAGA+AGG | + | chr5_1:17090450-17090469 | None:intergenic | 40.0% | |
| GCTTCAACAACATCAAAAGG+AGG | + | chr5_1:17090569-17090588 | None:intergenic | 40.0% | |
| TCGTGCTCTTCTTGAGAAAT+TGG | - | chr5_1:17090610-17090629 | Msa0720840:intron | 40.0% | |
| CACTAACATAGACACACCAA+CGG | - | chr5_1:17090898-17090917 | Msa0720840:intron | 40.0% | |
| CATATTAGTGTCATGTCCGT+TGG | + | chr5_1:17090917-17090936 | None:intergenic | 40.0% | |
| ACGGACATGACACTAATATG+TGG | - | chr5_1:17090917-17090936 | Msa0720840:intron | 40.0% | |
| TGACACTAATATGTGGACAC+CGG | - | chr5_1:17090924-17090943 | Msa0720840:intron | 40.0% | |
| !! | TTGACTAATGGGGTGTTGAT+TGG | - | chr5_1:17091140-17091159 | Msa0720840:intron | 40.0% |
| ! | GTTGATTGGTTGTGTTCTGT+AGG | - | chr5_1:17091154-17091173 | Msa0720840:intron | 40.0% |
| TGTTCTGTAGGAACGTGATT+TGG | - | chr5_1:17091166-17091185 | Msa0720840:intron | 40.0% | |
| TCCAAAGGTTCTACCAACTT+AGG | + | chr5_1:17091224-17091243 | None:intergenic | 40.0% | |
| ! | AGAACCTTTGGAGAAGATTG+TGG | - | chr5_1:17091232-17091251 | Msa0720840:intron | 40.0% |
| CTATCCACAATCTTCTCCAA+AGG | + | chr5_1:17091239-17091258 | None:intergenic | 40.0% | |
| ! | CTTTGGAGAAGATTGTGGAT+AGG | - | chr5_1:17091237-17091256 | Msa0720840:intron | 40.0% |
| AAGTACCTGCACATCTTCAA+TGG | + | chr5_1:17091330-17091349 | None:intergenic | 40.0% | |
| ! | TGAAGATGTGCAGGTACTTT+TGG | - | chr5_1:17091331-17091350 | Msa0720840:intron | 40.0% |
| ! | TATGATGACTGGTTGTGCTT+TGG | - | chr5_1:17091440-17091459 | Msa0720840:intron | 40.0% |
| ! | ATGATGACTGGTTGTGCTTT+GGG | - | chr5_1:17091441-17091460 | Msa0720840:intron | 40.0% |
| GCGGAAATTTAACAAACGAG+TGG | + | chr5_1:17092138-17092157 | None:intergenic | 40.0% | |
| GAAAGAACAGGCTGTTATTG+GGG | + | chr5_1:17092248-17092267 | None:intergenic | 40.0% | |
| GTGAAAGAACAGGCTGTTAT+TGG | + | chr5_1:17092250-17092269 | None:intergenic | 40.0% | |
| TGGAAGGTAAGTGAAAGAAC+AGG | + | chr5_1:17092260-17092279 | None:intergenic | 40.0% | |
| ! | CTCCTTTATTTGGTCTGCAA+AGG | + | chr5_1:17092357-17092376 | None:intergenic | 40.0% |
| CTTTGCAGACCAAATAAAGG+AGG | - | chr5_1:17092355-17092374 | Msa0720840:intron | 40.0% | |
| GGTGATTATGTACTAGGCTT+TGG | - | chr5_1:17092525-17092544 | Msa0720840:CDS | 40.0% | |
| ACTGAGCATATCATGTTCTC+AGG | - | chr5_1:17092576-17092595 | Msa0720840:CDS | 40.0% | |
| CATATCATGTTCTCAGGCTA+GGG | - | chr5_1:17092582-17092601 | Msa0720840:intron | 40.0% | |
| ATAGGACAAGCAACATGAAC+TGG | - | chr5_1:17092670-17092689 | Msa0720840:intron | 40.0% | |
| AAAATTTGGGGAGAACGTTC+TGG | - | chr5_1:17093010-17093029 | Msa0720840:intron | 40.0% | |
| GCATCCAATGTAATTACCCA+TGG | + | chr5_1:17093257-17093276 | None:intergenic | 40.0% | |
| !! | TATTTAACTCGAGCATCGAG+TGG | - | chr5_1:17093344-17093363 | Msa0720840:intron | 40.0% |
| ATTGCCTCATTAGAGGAAGA+TGG | + | chr5_1:17093892-17093911 | None:intergenic | 40.0% | |
| CCAAGTTATTGCCTCATTAG+AGG | + | chr5_1:17093899-17093918 | None:intergenic | 40.0% | |
| CCTCTAATGAGGCAATAACT+TGG | - | chr5_1:17093896-17093915 | Msa0720840:intron | 40.0% | |
| TAAGGTCTTCCATATCTGCA+AGG | + | chr5_1:17093938-17093957 | None:intergenic | 40.0% | |
| !!! | CACATTGGGACATTAGCTTT+TGG | - | chr5_1:17094003-17094022 | Msa0720840:CDS | 40.0% |
| !!! | ACATTAGCTTTTGGAGTGAG+AGG | - | chr5_1:17094012-17094031 | Msa0720840:CDS | 40.0% |
| GGAGAAAAAGGAACGTTTAG+TGG | + | chr5_1:17094417-17094436 | None:intergenic | 40.0% | |
| TTCCCCCCAGTTATAGTATA+TGG | - | chr5_1:17094535-17094554 | Msa0720840:intron | 40.0% | |
| AAATTGGTCAATGGGGCAAA+CGG | + | chr5_1:17094571-17094590 | None:intergenic | 40.0% | |
| TCTCTGCCAAATGTTATGGA+TGG | - | chr5_1:17094717-17094736 | Msa0720840:intron | 40.0% | |
| ATTGAAATTGAGCCAGCTGA+CGG | - | chr5_1:17094771-17094790 | Msa0720840:intron | 40.0% | |
| ! | GACTCCCTTTTATTCATCTG+TGG | - | chr5_1:17094811-17094830 | Msa0720840:intron | 40.0% |
| TTTCGTGTCAAAGATTCCTC+AGG | - | chr5_1:17094916-17094935 | Msa0720840:intron | 40.0% | |
| AACCTTGATGAGTTACCATC+AGG | + | chr5_1:17095045-17095064 | None:intergenic | 40.0% | |
| TGTTTGATTGCACACCATGT+GGG | + | chr5_1:17095076-17095095 | None:intergenic | 40.0% | |
| AGTTGTCTGGGCTATATCAA+TGG | - | chr5_1:17095214-17095233 | Msa0720840:intron | 40.0% | |
| GTTGTCTGGGCTATATCAAT+GGG | - | chr5_1:17095215-17095234 | Msa0720840:intron | 40.0% | |
| GTAAATACAGCAAGACTGAG+AGG | + | chr5_1:17095430-17095449 | None:intergenic | 40.0% | |
| ! | CTCAGTCTTGCTGTATTTAC+AGG | - | chr5_1:17095430-17095449 | Msa0720840:intron | 40.0% |
| !!! | CGACATTCATTTTGAAACGG+AGG | + | chr5_1:17095560-17095579 | None:intergenic | 40.0% |
| !!! | TGGTTGCTTTTTCCTTTTGG+TGG | + | chr5_1:17095875-17095894 | None:intergenic | 40.0% |
| AAGCTTAACCATCAAGCACA+AGG | - | chr5_1:17095964-17095983 | Msa0720840:intron | 40.0% | |
| AAGATATGCCTTGTGCTTGA+TGG | + | chr5_1:17095975-17095994 | None:intergenic | 40.0% | |
| CAAGCACAAGGCATATCTTA+AGG | - | chr5_1:17095976-17095995 | Msa0720840:intron | 40.0% | |
| CATGCTTAATCACCTGATGA+TGG | - | chr5_1:17096022-17096041 | Msa0720840:CDS | 40.0% | |
| GGAAACCTTCATCCTAACTT+GGG | - | chr5_1:17096142-17096161 | Msa0720840:intron | 40.0% | |
| AGTTTCCCAAGTTAGGATGA+AGG | + | chr5_1:17096150-17096169 | None:intergenic | 40.0% | |
| AAACAGGAGTTTCCCAAGTT+AGG | + | chr5_1:17096157-17096176 | None:intergenic | 40.0% | |
| ACAGTCTCAACCTGAGAAAA+AGG | + | chr5_1:17096515-17096534 | None:intergenic | 40.0% | |
| GAGACTGTCTTCCATGAATT+TGG | - | chr5_1:17096527-17096546 | Msa0720840:intron | 40.0% | |
| CACTTCAACACATGCTTACT+AGG | - | chr5_1:17096555-17096574 | Msa0720840:intron | 40.0% | |
| ATGCTTACTAGGGAAGATGA+GGG | - | chr5_1:17096566-17096585 | Msa0720840:intron | 40.0% | |
| TGGTATTAGGGGAATAGAGT+GGG | - | chr5_1:17096598-17096617 | Msa0720840:intron | 40.0% | |
| GCTTCTGATATACGTCTTCT+GGG | + | chr5_1:17096850-17096869 | None:intergenic | 40.0% | |
| AGCTTCTGATATACGTCTTC+TGG | + | chr5_1:17096851-17096870 | None:intergenic | 40.0% | |
| GTAACACAACCCAAGAAAGA+TGG | + | chr5_1:17097338-17097357 | None:intergenic | 40.0% | |
| TCTGCGATCAACATCATAGA+TGG | + | chr5_1:17097471-17097490 | None:intergenic | 40.0% | |
| AGCTGGATACTATAGCTACA+AGG | - | chr5_1:17097922-17097941 | Msa0720840:CDS | 40.0% | |
| CATATAGTCCACAGAAAAGG+GGG | - | chr5_1:17098008-17098027 | Msa0720840:intron | 40.0% | |
| AGATGCTTTCTCTGCATTTG+AGG | - | chr5_1:17098094-17098113 | Msa0720840:intron | 40.0% | |
| TGCAGGATTGGATGATAACA+AGG | - | chr5_1:17098118-17098137 | Msa0720840:intron | 40.0% | |
| TACACAGGCTGTTGTAGAAA+CGG | - | chr5_1:17098360-17098379 | Msa0720840:intron | 40.0% | |
| ATCTCAATTCTCACCTCAAG+TGG | + | chr5_1:17098433-17098452 | None:intergenic | 40.0% | |
| ATCTGTCACATGCATATGTG+GGG | - | chr5_1:17098536-17098555 | Msa0720840:CDS | 40.0% | |
| ! | TTTTTACCAACTTTGGCGTG+TGG | - | chr5_1:17098569-17098588 | Msa0720840:CDS | 40.0% |
| CTCTATCCTAAGCTGCAATT+AGG | + | chr5_1:17098692-17098711 | None:intergenic | 40.0% | |
| CTAATTGCAGCTTAGGATAG+AGG | - | chr5_1:17098690-17098709 | Msa0720840:CDS | 40.0% | |
| AGAGTGAGAATGTGAGTGTG+AGG | + | chr5_1:17090313-17090332 | None:intergenic | 45.0% | |
| GAAGCCGAACAAGTAAACGA+AGG | + | chr5_1:17090485-17090504 | None:intergenic | 45.0% | |
| TACTTGTTCGGCTTCTTCCA+TGG | - | chr5_1:17090490-17090509 | Msa0720840:intron | 45.0% | |
| ! | TCAAGAAGAGCACGAATTCC+CGG | + | chr5_1:17090605-17090624 | None:intergenic | 45.0% |
| TGCATGTTAGTGGCATGTGT+CGG | - | chr5_1:17090994-17091013 | Msa0720840:CDS | 45.0% | |
| ! | TCTGTAGGAACGTGATTTGG+AGG | - | chr5_1:17091169-17091188 | Msa0720840:intron | 45.0% |
| ! | GTGATTTGGAGGAGCTTGAA+CGG | - | chr5_1:17091180-17091199 | Msa0720840:CDS | 45.0% |
| !! | GCCTAAGTTGGTAGAACCTT+TGG | - | chr5_1:17091220-17091239 | Msa0720840:intron | 45.0% |
| GGAGAAGATTGTGGATAGGT+TGG | - | chr5_1:17091241-17091260 | Msa0720840:intron | 45.0% | |
| ! | TGGATAGGTTGGCTGTTGTT+TGG | - | chr5_1:17091252-17091271 | Msa0720840:intron | 45.0% |
| ! | GGATAGGTTGGCTGTTGTTT+GGG | - | chr5_1:17091253-17091272 | Msa0720840:intron | 45.0% |
| ! | GATAGGTTGGCTGTTGTTTG+GGG | - | chr5_1:17091254-17091273 | Msa0720840:intron | 45.0% |
| ! | ATAGGTTGGCTGTTGTTTGG+GGG | - | chr5_1:17091255-17091274 | Msa0720840:intron | 45.0% |
| GCACATCTTCAATGGCTGAA+CGG | + | chr5_1:17091322-17091341 | None:intergenic | 45.0% | |
| TTCAGCCATTGAAGATGTGC+AGG | - | chr5_1:17091322-17091341 | Msa0720840:intron | 45.0% | |
| !! | TGGTTGTGCTTTGGGATGTA+GGG | - | chr5_1:17091449-17091468 | Msa0720840:intron | 45.0% |
| CGATTCAAGACTCTCCTGAT+TGG | - | chr5_1:17091860-17091879 | Msa0720840:intron | 45.0% | |
| TCGCTAAGTGTCTTCCAATC+AGG | + | chr5_1:17091877-17091896 | None:intergenic | 45.0% | |
| TAGAAGCTGAGAACCAGCTA+CGG | + | chr5_1:17092038-17092057 | None:intergenic | 45.0% | |
| CGACATTTCCGACAATGAAG+CGG | + | chr5_1:17092157-17092176 | None:intergenic | 45.0% | |
| GCATATCATGTTCTCAGGCT+AGG | - | chr5_1:17092581-17092600 | Msa0720840:intron | 45.0% | |
| GTGATGCATGTGGTTCCTTT+GGG | + | chr5_1:17092737-17092756 | None:intergenic | 45.0% | |
| TGTGATGCATGTGGTTCCTT+TGG | + | chr5_1:17092738-17092757 | None:intergenic | 45.0% | |
| ATTTCAGGCTGTGATGCATG+TGG | + | chr5_1:17092747-17092766 | None:intergenic | 45.0% | |
| ATTGGCAGTATATGTCAGCG+AGG | - | chr5_1:17092776-17092795 | Msa0720840:intron | 45.0% | |
| ATGGTTTCATCCATAGGAGC+TGG | - | chr5_1:17092974-17092993 | Msa0720840:intron | 45.0% | |
| TTCATCCATAGGAGCTGGAA+AGG | - | chr5_1:17092979-17092998 | Msa0720840:intron | 45.0% | |
| GATAACCTTTCCAGCTCCTA+TGG | + | chr5_1:17092987-17093006 | None:intergenic | 45.0% | |
| GATTACCTGCTACTGCTCTT+GGG | - | chr5_1:17093084-17093103 | Msa0720840:intron | 45.0% | |
| TGCACAAAGCGCAGTATCTA+AGG | - | chr5_1:17093112-17093131 | Msa0720840:intron | 45.0% | |
| AAAATGCCACCGCTGAGAAT+GGG | - | chr5_1:17093231-17093250 | Msa0720840:intron | 45.0% | |
| TGGGCCATGGGTAATTACAT+TGG | - | chr5_1:17093250-17093269 | Msa0720840:intron | 45.0% | |
| AGAAGCTTCGTAAAGCTTCC+TGG | - | chr5_1:17093570-17093589 | Msa0720840:intron | 45.0% | |
| GAAGCTTCGTAAAGCTTCCT+GGG | - | chr5_1:17093571-17093590 | Msa0720840:intron | 45.0% | |
| ACGTCCATCTTCCTCTAATG+AGG | - | chr5_1:17093885-17093904 | Msa0720840:intron | 45.0% | |
| ! | TTCTAAAGACCAGGGTGCAT+TGG | - | chr5_1:17093965-17093984 | Msa0720840:intron | 45.0% |
| TTCAAGTGAGTGAGTGTGAG+AGG | + | chr5_1:17094071-17094090 | None:intergenic | 45.0% | |
| AATTGGTCAATGGGGCAAAC+GGG | + | chr5_1:17094570-17094589 | None:intergenic | 45.0% | |
| GCAGATGTATGAGCTTTCCA+AGG | + | chr5_1:17094661-17094680 | None:intergenic | 45.0% | |
| TTCATCTGTGGTTCTTGCGT+TGG | - | chr5_1:17094823-17094842 | Msa0720840:intron | 45.0% | |
| TCATCTGTGGTTCTTGCGTT+GGG | - | chr5_1:17094824-17094843 | Msa0720840:intron | 45.0% | |
| ! | TTTTCGGAAGGACGACTGTA+GGG | + | chr5_1:17094970-17094989 | None:intergenic | 45.0% |
| !! | TTTTTCGGAAGGACGACTGT+AGG | + | chr5_1:17094971-17094990 | None:intergenic | 45.0% |
| ACAGTCGTCCTTCCGAAAAA+AGG | - | chr5_1:17094971-17094990 | Msa0720840:intron | 45.0% | |
| TAACTCATCAAGGTTGCCTG+TGG | - | chr5_1:17095050-17095069 | Msa0720840:intron | 45.0% | |
| GTGTTTGATTGCACACCATG+TGG | + | chr5_1:17095077-17095096 | None:intergenic | 45.0% | |
| TGCAATCAAACACCTCCAGT+AGG | - | chr5_1:17095084-17095103 | Msa0720840:CDS | 45.0% | |
| !! | AAACTTGGCTTGCTTCCTAC+TGG | + | chr5_1:17095102-17095121 | None:intergenic | 45.0% |
| GGGAAACCTTCATCCTAACT+TGG | - | chr5_1:17096141-17096160 | Msa0720840:intron | 45.0% | |
| GAAGTGCGTGTCCAAATTCA+TGG | + | chr5_1:17096541-17096560 | None:intergenic | 45.0% | |
| CATGCTTACTAGGGAAGATG+AGG | - | chr5_1:17096565-17096584 | Msa0720840:intron | 45.0% | |
| AGGGTCTAGTTGCTGGTATT+AGG | - | chr5_1:17096585-17096604 | Msa0720840:intron | 45.0% | |
| GGGTCTAGTTGCTGGTATTA+GGG | - | chr5_1:17096586-17096605 | Msa0720840:intron | 45.0% | |
| GGTCTAGTTGCTGGTATTAG+GGG | - | chr5_1:17096587-17096606 | Msa0720840:intron | 45.0% | |
| CTGGTATTAGGGGAATAGAG+TGG | - | chr5_1:17096597-17096616 | Msa0720840:intron | 45.0% | |
| ! | ACAAAGAGGTATAGGAGGCA+CGG | + | chr5_1:17097575-17097594 | None:intergenic | 45.0% |
| AGACGGCGTAATCAACAAAG+AGG | + | chr5_1:17097589-17097608 | None:intergenic | 45.0% | |
| GCCATGTACAATGGAACAGA+CGG | + | chr5_1:17097606-17097625 | None:intergenic | 45.0% | |
| TTGTTAGGTGGATATGCAGC+TGG | - | chr5_1:17097905-17097924 | Msa0720840:CDS | 45.0% | |
| ! | AGTCATTTCCCCCTTTTCTG+TGG | + | chr5_1:17098019-17098038 | None:intergenic | 45.0% |
| TTCTCTGCATTTGAGGATGC+AGG | - | chr5_1:17098101-17098120 | Msa0720840:intron | 45.0% | |
| TGCATTTGAGGATGCAGGAT+TGG | - | chr5_1:17098106-17098125 | Msa0720840:intron | 45.0% | |
| ACACAGGCTGTTGTAGAAAC+GGG | - | chr5_1:17098361-17098380 | Msa0720840:intron | 45.0% | |
| TAGAAACGGGACACAAGTTC+AGG | - | chr5_1:17098374-17098393 | Msa0720840:intron | 45.0% | |
| AGAAACGGGACACAAGTTCA+GGG | - | chr5_1:17098375-17098394 | Msa0720840:intron | 45.0% | |
| TCAATTCTCACCTCAAGTGG+TGG | + | chr5_1:17098430-17098449 | None:intergenic | 45.0% | |
| CATGCATATGTGGGGTAACT+AGG | - | chr5_1:17098544-17098563 | Msa0720840:CDS | 45.0% | |
| TAGGTGTTTGTGCAATTCCG+TGG | - | chr5_1:17098627-17098646 | Msa0720840:CDS | 45.0% | |
| AGGTGTTTGTGCAATTCCGT+GGG | - | chr5_1:17098628-17098647 | Msa0720840:CDS | 45.0% | |
| TTGTGTCTGAGCAATGCATC+TGG | + | chr5_1:17098666-17098685 | None:intergenic | 45.0% | |
| GATGCATTGCTCAGACACAA+TGG | - | chr5_1:17098666-17098685 | Msa0720840:CDS | 45.0% | |
| CAATGGCCTAATTGCAGCTT+AGG | - | chr5_1:17098683-17098702 | Msa0720840:CDS | 45.0% | |
| !! | TAAAAATAATTATATATCAA+GGG | + | chr5_1:17094312-17094331 | None:intergenic | 5.0% |
| !! | TTAAAAATAATTATATATCA+AGG | + | chr5_1:17094313-17094332 | None:intergenic | 5.0% |
| !! | AAAATTATTATTAATTAAAG+TGG | + | chr5_1:17095332-17095351 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAAAAAAAAT+AGG | - | chr5_1:17095367-17095386 | Msa0720840:intron | 5.0% |
| AATCCCTTCCTTGTCCCCTT+TGG | - | chr5_1:17090411-17090430 | Msa0720840:exon | 50.0% | |
| AGACCAAAGGGGACAAGGAA+GGG | + | chr5_1:17090417-17090436 | None:intergenic | 50.0% | |
| AAGACCAAAGGGGACAAGGA+AGG | + | chr5_1:17090418-17090437 | None:intergenic | 50.0% | |
| GAAGAAGACCAAAGGGGACA+AGG | + | chr5_1:17090422-17090441 | None:intergenic | 50.0% | |
| ATCAAGAGCAGAAGCAGCCA+TGG | + | chr5_1:17090510-17090529 | None:intergenic | 50.0% | |
| ! | CATGTGTCGGTGCATGTTAG+TGG | - | chr5_1:17090984-17091003 | Msa0720840:CDS | 50.0% |
| !! | CAAAAGTGTCGGTGCTACAG+AGG | - | chr5_1:17091037-17091056 | Msa0720840:intron | 50.0% |
| TCTACCAACTTAGGCCACGA+AGG | + | chr5_1:17091215-17091234 | None:intergenic | 50.0% | |
| CTCGGTCTTGCTTCTGTTGA+TGG | - | chr5_1:17091394-17091413 | Msa0720840:intron | 50.0% | |
| !! | CTGGTTGTGCTTTGGGATGT+AGG | - | chr5_1:17091448-17091467 | Msa0720840:intron | 50.0% |
| TTCACCTTGCATTCCGTAGC+TGG | - | chr5_1:17092022-17092041 | Msa0720840:intron | 50.0% | |
| AGAACCAGCTACGGAATGCA+AGG | + | chr5_1:17092029-17092048 | None:intergenic | 50.0% | |
| GGATTACCTGCTACTGCTCT+TGG | - | chr5_1:17093083-17093102 | Msa0720840:intron | 50.0% | |
| GAAAATGCCACCGCTGAGAA+TGG | - | chr5_1:17093230-17093249 | Msa0720840:intron | 50.0% | |
| AGACTTCCTCACGCAGAGAA+CGG | + | chr5_1:17093316-17093335 | None:intergenic | 50.0% | |
| !! | TCGAGCATCGAGTGGTGATT+TGG | - | chr5_1:17093352-17093371 | Msa0720840:intron | 50.0% |
| GGTTAGCATGGCAACCAAGA+TGG | - | chr5_1:17093517-17093536 | Msa0720840:intron | 50.0% | |
| GGGGGGAATGAACTTTCATG+TGG | + | chr5_1:17094523-17094542 | None:intergenic | 50.0% | |
| CATCTGTGGTTCTTGCGTTG+GGG | - | chr5_1:17094825-17094844 | Msa0720840:intron | 50.0% | |
| CGTCCTTCCGAAAAAAGGCA+AGG | - | chr5_1:17094976-17094995 | Msa0720840:intron | 50.0% | |
| !!! | GCACCTTGCCTTTTTTCGGA+AGG | + | chr5_1:17094982-17095001 | None:intergenic | 50.0% |
| !!! | CCACGCACCTTGCCTTTTTT+CGG | + | chr5_1:17094986-17095005 | None:intergenic | 50.0% |
| AAAAAGGCAAGGTGCGTGGA+TGG | - | chr5_1:17094987-17095006 | Msa0720840:intron | 50.0% | |
| CGCCTGATGGTAACTCATCA+AGG | - | chr5_1:17095040-17095059 | Msa0720840:intron | 50.0% | |
| GAAGATGAGGGTCTAGTTGC+TGG | - | chr5_1:17096578-17096597 | Msa0720840:intron | 50.0% | |
| AGTGCCAGCACGATAAGTTC+TGG | + | chr5_1:17096882-17096901 | None:intergenic | 50.0% | |
| TGGCACTCAAAGTCTTCGAC+AGG | - | chr5_1:17096895-17096914 | Msa0720840:intron | 50.0% | |
| ! | TAGATGGATTCTTGTCCCCC+AGG | + | chr5_1:17097455-17097474 | None:intergenic | 50.0% |
| AGTGATTCCTCCATTGCCAG+AGG | - | chr5_1:17097508-17097527 | Msa0720840:intron | 50.0% | |
| AATCTGTCCTCTGGCAATGG+AGG | + | chr5_1:17097518-17097537 | None:intergenic | 50.0% | |
| AGGAATCTGTCCTCTGGCAA+TGG | + | chr5_1:17097521-17097540 | None:intergenic | 50.0% | |
| CTGCAAAGGAATCTGTCCTC+TGG | + | chr5_1:17097527-17097546 | None:intergenic | 50.0% | |
| GCCGTCTGTTCCATTGTACA+TGG | - | chr5_1:17097602-17097621 | Msa0720840:intron | 50.0% | |
| AGGGAGACCATTCTTGCTCT+TGG | - | chr5_1:17098394-17098413 | Msa0720840:intron | 50.0% | |
| GAGACCATTCTTGCTCTTGG+AGG | - | chr5_1:17098397-17098416 | Msa0720840:intron | 50.0% | |
| ACCATTCTTGCTCTTGGAGG+TGG | - | chr5_1:17098400-17098419 | Msa0720840:intron | 50.0% | |
| CAAGATCCACACGCCAAAGT+TGG | + | chr5_1:17098578-17098597 | None:intergenic | 50.0% | |
| CTGAGCAATGCATCTGGTGT+TGG | + | chr5_1:17098660-17098679 | None:intergenic | 50.0% | |
| TGAAGCGAAGCACGTGAGAC+CGG | - | chr5_1:17090583-17090602 | Msa0720840:intron | 55.0% | |
| TAGTGGCATGTGTCGGACAC+CGG | - | chr5_1:17091001-17091020 | Msa0720840:CDS | 55.0% | |
| AACGGAGTGTGGAACCTTCG+TGG | - | chr5_1:17091198-17091217 | Msa0720840:intron | 55.0% | |
| GGAACCTTCGTGGCCTAAGT+TGG | - | chr5_1:17091208-17091227 | Msa0720840:intron | 55.0% | |
| ! | GTTGGCTGTTGTTTGGGGGA+TGG | - | chr5_1:17091259-17091278 | Msa0720840:intron | 55.0% |
| ACCTGCTACTGCTCTTGGGT+TGG | - | chr5_1:17093088-17093107 | Msa0720840:intron | 55.0% | |
| TACCCATGGCCCATTCTCAG+CGG | + | chr5_1:17093243-17093262 | None:intergenic | 55.0% | |
| TCCTGGGATGCTGCAGTACA+AGG | - | chr5_1:17093587-17093606 | Msa0720840:intron | 55.0% | |
| ACCTTGTACTGCAGCATCCC+AGG | + | chr5_1:17093591-17093610 | None:intergenic | 55.0% | |
| CATCAGCTTCCAATGCACCC+TGG | + | chr5_1:17093977-17093996 | None:intergenic | 55.0% | |
| ATAGGCAACTGGACTGCCTG+AGG | + | chr5_1:17094935-17094954 | None:intergenic | 55.0% | |
| CCGAAAAAAGGCAAGGTGCG+TGG | - | chr5_1:17094983-17095002 | Msa0720840:intron | 55.0% | |
| AGTCGTGTACTGTCGCCTGA+TGG | - | chr5_1:17095027-17095046 | Msa0720840:intron | 55.0% | |
| !! | CTTGGCTTGCTTCCTACTGG+AGG | + | chr5_1:17095099-17095118 | None:intergenic | 55.0% |
| ! | GCCAGCACGATAAGTTCTGG+CGG | + | chr5_1:17096879-17096898 | None:intergenic | 55.0% |
| GCCACCTCCAAGAGCAAGAA+TGG | + | chr5_1:17098404-17098423 | None:intergenic | 55.0% | |
| !! | CTGGTGTTGGTTCTCTCCCA+CGG | + | chr5_1:17098647-17098666 | None:intergenic | 55.0% |
| GAAGCGAAGCACGTGAGACC+GGG | - | chr5_1:17090584-17090603 | Msa0720840:intron | 60.0% | |
| GGAGGAGCTTGAACGGAGTG+TGG | - | chr5_1:17091187-17091206 | Msa0720840:CDS | 60.0% | |
| GCCAACCCAAGAGCAGTAGC+AGG | + | chr5_1:17093092-17093111 | None:intergenic | 60.0% | |
| CACCGCTGAGAATGGGCCAT+GGG | - | chr5_1:17093238-17093257 | Msa0720840:intron | 60.0% | |
| TCGCAACCGTTCTCTGCGTG+AGG | - | chr5_1:17093307-17093326 | Msa0720840:intron | 60.0% | |
| AAGGTTGCCTGTGGCCCACA+TGG | - | chr5_1:17095059-17095078 | Msa0720840:CDS | 60.0% | |
| TTGCACACCATGTGGGCCAC+AGG | + | chr5_1:17095069-17095088 | None:intergenic | 60.0% | |
| GCCGCCAGAACTTATCGTGC+TGG | - | chr5_1:17096875-17096894 | Msa0720840:intron | 60.0% | |
| AGGTGGCAAGCCACCACTTG+AGG | - | chr5_1:17098417-17098436 | Msa0720840:intron | 60.0% | |
| CCATGGCCCATTCTCAGCGG+TGG | + | chr5_1:17093240-17093259 | None:intergenic | 65.0% | |
| CCACCGCTGAGAATGGGCCA+TGG | - | chr5_1:17093237-17093256 | Msa0720840:intron | 65.0% | |
| ! | GCCAGCTGACGGTCTAGCTC+CGG | - | chr5_1:17094782-17094801 | Msa0720840:intron | 65.0% |
| ACCGGAGCTAGACCGTCAGC+TGG | + | chr5_1:17094786-17094805 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 17090245 | 17098874 | 17090245 | ID=Msa0720840;Name=Msa0720840 |
| chr5_1 | mRNA | 17090245 | 17098874 | 17090245 | ID=Msa0720840-mRNA-1;Parent=Msa0720840;Name=Msa0720840-mRNA-1;_AED=0.07;_eAED=0.07;_QI=6|1|1|1|1|1|17|170|786 |
| chr5_1 | exon | 17090245 | 17090489 | 17090245 | ID=Msa0720840-mRNA-1:exon:6520;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17090681 | 17090752 | 17090681 | ID=Msa0720840-mRNA-1:exon:6519;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17090980 | 17091045 | 17090980 | ID=Msa0720840-mRNA-1:exon:6518;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17091176 | 17091207 | 17091176 | ID=Msa0720840-mRNA-1:exon:6517;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17091553 | 17091712 | 17091553 | ID=Msa0720840-mRNA-1:exon:6516;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17092203 | 17092320 | 17092203 | ID=Msa0720840-mRNA-1:exon:6515;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17092450 | 17092595 | 17092450 | ID=Msa0720840-mRNA-1:exon:6514;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17093982 | 17094227 | 17093982 | ID=Msa0720840-mRNA-1:exon:6513;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17094316 | 17094423 | 17094316 | ID=Msa0720840-mRNA-1:exon:6512;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17095055 | 17095176 | 17095055 | ID=Msa0720840-mRNA-1:exon:6511;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17095511 | 17095601 | 17095511 | ID=Msa0720840-mRNA-1:exon:6510;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17095665 | 17095895 | 17095665 | ID=Msa0720840-mRNA-1:exon:6509;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17095986 | 17096129 | 17095986 | ID=Msa0720840-mRNA-1:exon:6508;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17096680 | 17096756 | 17096680 | ID=Msa0720840-mRNA-1:exon:6507;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17097200 | 17097323 | 17097200 | ID=Msa0720840-mRNA-1:exon:6506;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17097776 | 17097943 | 17097776 | ID=Msa0720840-mRNA-1:exon:6505;Parent=Msa0720840-mRNA-1 |
| chr5_1 | exon | 17098488 | 17098874 | 17098488 | ID=Msa0720840-mRNA-1:exon:6504;Parent=Msa0720840-mRNA-1 |
| chr5_1 | five_prime_UTR | 17098869 | 17098874 | 17098869 | ID=Msa0720840-mRNA-1:five_prime_utr;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17098488 | 17098868 | 17098488 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17097776 | 17097943 | 17097776 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17097200 | 17097323 | 17097200 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17096680 | 17096756 | 17096680 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17095986 | 17096129 | 17095986 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17095665 | 17095895 | 17095665 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17095511 | 17095601 | 17095511 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17095055 | 17095176 | 17095055 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17094316 | 17094423 | 17094316 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17093982 | 17094227 | 17093982 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17092450 | 17092595 | 17092450 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17092203 | 17092320 | 17092203 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17091553 | 17091712 | 17091553 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17091176 | 17091207 | 17091176 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17090980 | 17091045 | 17090980 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17090681 | 17090752 | 17090681 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | CDS | 17090415 | 17090489 | 17090415 | ID=Msa0720840-mRNA-1:cds;Parent=Msa0720840-mRNA-1 |
| chr5_1 | three_prime_UTR | 17090245 | 17090414 | 17090245 | ID=Msa0720840-mRNA-1:three_prime_utr;Parent=Msa0720840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
