Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841970 | XP_003612953.2 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841970 | sp|Q94AM1|OOPDA_ARATH | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841970 | G7KGF6 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0841970 | 0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0032120 | Msa0841970 | 0.817327 | 3.492713e-52 | -8.615850e-47 |
| Msa0032400 | Msa0841970 | 0.827172 | 1.811471e-54 | -8.615850e-47 |
| Msa0055590 | Msa0841970 | 0.806052 | 9.917272e-50 | -8.615850e-47 |
| Msa0059590 | Msa0841970 | 0.806226 | 9.116010e-50 | -8.615850e-47 |
| Msa0073820 | Msa0841970 | 0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0094700 | Msa0841970 | 0.822151 | 2.761746e-53 | -8.615850e-47 |
| Msa0707780 | Msa0841970 | 0.810776 | 9.741290e-51 | -8.615850e-47 |
| Msa0709480 | Msa0841970 | 0.864086 | 1.566105e-64 | -8.615850e-47 |
| Msa0720840 | Msa0841970 | 0.997739 | 3.118018e-248 | -8.615850e-47 |
| Msa0735470 | Msa0841970 | 0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0761320 | Msa0841970 | 0.959480 | 1.731438e-117 | -8.615850e-47 |
| Msa0790830 | Msa0841970 | 0.841550 | 4.438996e-58 | -8.615850e-47 |
| Msa0803920 | Msa0841970 | 0.939707 | 8.079966e-100 | -8.615850e-47 |
| Msa0805940 | Msa0841970 | 0.823020 | 1.734235e-53 | -8.615850e-47 |
| Msa0814760 | Msa0841970 | 0.829099 | 6.220291e-55 | -8.615850e-47 |
| Msa0830410 | Msa0841970 | 0.826677 | 2.378726e-54 | -8.615850e-47 |
| Msa0841970 | Msa0854590 | 0.810796 | 9.644653e-51 | -8.615850e-47 |
| Msa0841970 | Msa0901100 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
| Msa0841970 | Msa0946650 | 0.814458 | 1.525250e-51 | -8.615850e-47 |
| Msa0841970 | Msa0968010 | 0.801448 | 8.962115e-49 | -8.615850e-47 |
| Msa0841970 | Msa1011210 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0841970 | Msa1011240 | 0.822895 | 1.854255e-53 | -8.615850e-47 |
| Msa0841970 | Msa1020710 | 0.823501 | 1.338743e-53 | -8.615850e-47 |
| Msa0841970 | Msa1028460 | 0.814356 | 1.606253e-51 | -8.615850e-47 |
| Msa0841970 | Msa1072080 | 0.812304 | 4.534159e-51 | -8.615850e-47 |
| Msa0841970 | Msa1084490 | 0.868027 | 8.859802e-66 | -8.615850e-47 |
| Msa0841970 | Msa1099030 | 0.833439 | 5.328890e-56 | -8.615850e-47 |
| Msa0841970 | Msa1125780 | 0.847706 | 9.756317e-60 | -8.615850e-47 |
| Msa0841970 | Msa1125950 | 0.849343 | 3.437906e-60 | -8.615850e-47 |
| Msa0841970 | Msa1166180 | 0.811129 | 8.168376e-51 | -8.615850e-47 |
| Msa0841970 | Msa1166280 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa0841970 | Msa1171340 | 0.841272 | 5.254943e-58 | -8.615850e-47 |
| Msa0841970 | Msa1206560 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0841970 | Msa1208980 | 0.812759 | 3.606549e-51 | -8.615850e-47 |
| Msa0841970 | Msa1211070 | 0.824363 | 8.404014e-54 | -8.615850e-47 |
| Msa0841970 | Msa1224150 | 0.801113 | 1.049504e-48 | -8.615850e-47 |
| Msa0841970 | Msa1229660 | 0.812858 | 3.430556e-51 | -8.615850e-47 |
| Msa0841970 | Msa1229690 | 0.811537 | 6.661377e-51 | -8.615850e-47 |
| Msa0841970 | Msa1244260 | 0.816599 | 5.089050e-52 | -8.615850e-47 |
| Msa0841970 | Msa1310340 | 0.833920 | 4.041075e-56 | -8.615850e-47 |
| Msa0841970 | Msa1375630 | 0.854756 | 9.959673e-62 | -8.615850e-47 |
| Msa0841970 | Msa1376530 | 0.851696 | 7.499014e-61 | -8.615850e-47 |
| Msa0841970 | Msa1398480 | 0.809597 | 1.749495e-50 | -8.615850e-47 |
| Msa0841970 | Msa1426290 | 0.801088 | 1.062029e-48 | -8.615850e-47 |
| Msa0841970 | Msa1437690 | 0.802419 | 5.662135e-49 | -8.615850e-47 |
| Msa0841970 | Msa1454020 | 0.826055 | 3.346045e-54 | -8.615850e-47 |
| Msa0162030 | Msa0841970 | 0.809241 | 2.085682e-50 | -8.615850e-47 |
| Msa0162050 | Msa0841970 | 0.813218 | 2.860162e-51 | -8.615850e-47 |
| Msa0162070 | Msa0841970 | 0.829286 | 5.603750e-55 | -8.615850e-47 |
| Msa0171780 | Msa0841970 | 0.831777 | 1.377280e-55 | -8.615850e-47 |
| Msa0171930 | Msa0841970 | 0.824606 | 7.371001e-54 | -8.615850e-47 |
| Msa0185550 | Msa0841970 | 0.851899 | 6.569064e-61 | -8.615850e-47 |
| Msa0185700 | Msa0841970 | 0.817204 | 3.723328e-52 | -8.615850e-47 |
| Msa0207180 | Msa0841970 | 0.809444 | 1.886751e-50 | -8.615850e-47 |
| Msa0214730 | Msa0841970 | 0.802864 | 4.583395e-49 | -8.615850e-47 |
| Msa0230400 | Msa0841970 | 0.811409 | 7.101803e-51 | -8.615850e-47 |
| Msa0380420 | Msa0841970 | 0.855751 | 5.113827e-62 | -8.615850e-47 |
| Msa0420700 | Msa0841970 | 0.809411 | 1.917184e-50 | -8.615850e-47 |
| Msa0476150 | Msa0841970 | 0.850786 | 1.355711e-60 | -8.615850e-47 |
| Msa0476180 | Msa0841970 | 0.832095 | 1.149032e-55 | -8.615850e-47 |
| Msa0477780 | Msa0841970 | 0.817786 | 2.753129e-52 | -8.615850e-47 |
| Msa0274780 | Msa0841970 | 0.811081 | 8.365686e-51 | -8.615850e-47 |
| Msa0315480 | Msa0841970 | 0.803742 | 3.014984e-49 | -8.615850e-47 |
| Msa0486200 | Msa0841970 | 0.801973 | 6.992671e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841970 | MtrunA17_Chr5g0411651 | 98.982 | 786 | 8 | 0 | 1 | 786 | 1 | 786 | 0.0 | 1608 |
| Msa0841970 | MtrunA17_Chr3g0123041 | 27.787 | 583 | 373 | 17 | 199 | 773 | 153 | 695 | 1.64e-54 | 200 |
| Msa0841970 | MtrunA17_Chr3g0079521 | 24.096 | 664 | 453 | 18 | 137 | 784 | 66 | 694 | 4.80e-47 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841970 | AT5G65620.2 | 76.588 | 803 | 169 | 3 | 1 | 786 | 1 | 801 | 0.0 | 1241 |
| Msa0841970 | AT5G65620.1 | 77.440 | 789 | 159 | 3 | 15 | 786 | 1 | 787 | 0.0 | 1233 |
| Msa0841970 | AT5G10540.1 | 81.662 | 698 | 128 | 0 | 89 | 786 | 2 | 699 | 0.0 | 1209 |
| Msa0841970 | AT1G67690.1 | 26.268 | 552 | 365 | 16 | 233 | 778 | 187 | 702 | 3.55e-49 | 185 |
| Msa0841970 | AT5G51540.1 | 24.540 | 652 | 438 | 18 | 140 | 771 | 67 | 684 | 2.60e-48 | 182 |
Find 181 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTACCTTCTCAGTTTA+TGG | 0.075843 | 5_4:-18812639 | Msa0841970:CDS |
| GAGACTGTCTTCCATGAATT+TGG | 0.180270 | 5_4:-18812740 | Msa0841970:CDS |
| GGATAGGTTGGCTGTTGTTT+GGG | 0.205666 | 5_4:-18818014 | Msa0841970:CDS |
| TCGTGCTCTTCTTGAGAAAT+TGG | 0.224630 | 5_4:-18818657 | Msa0841970:intron |
| TAAGAACTGCCTCCTTTATT+TGG | 0.229698 | 5_4:+18816903 | None:intergenic |
| AGCTTCTGATATACGTCTTC+TGG | 0.235471 | 5_4:+18812419 | None:intergenic |
| ATGAGACACGAAGCACTTAT+TGG | 0.235646 | 5_4:-18819016 | Msa0841970:CDS |
| TGGATAGGTTGGCTGTTGTT+TGG | 0.249872 | 5_4:-18818015 | Msa0841970:CDS |
| TTGATTTAGAAAGACTTTAA+TGG | 0.272313 | 5_4:-18812477 | Msa0841970:intron |
| CACTTCAACACATGCTTACT+AGG | 0.287061 | 5_4:-18812712 | Msa0841970:CDS |
| CTTCTCAGTTTATGGAAAAC+TGG | 0.306346 | 5_4:-18812631 | Msa0841970:CDS |
| AGCTTCAGTCATATATTTGC+AGG | 0.317151 | 5_4:-18811722 | Msa0841970:intron |
| TTCACCTTCGTTTACTTGTT+CGG | 0.325252 | 5_4:-18818789 | Msa0841970:CDS |
| AGGGTCTAGTTGCTGGTATT+AGG | 0.327586 | 5_4:-18812682 | Msa0841970:CDS |
| AAAATTTGGGGAGAACGTTC+TGG | 0.328152 | 5_4:-18816257 | Msa0841970:CDS |
| AGGGAGACCATTCTTGCTCT+TGG | 0.328299 | 5_4:-18810873 | Msa0841970:CDS |
| GGATTACCTGCTACTGCTCT+TGG | 0.328426 | 5_4:-18816184 | Msa0841970:CDS |
| ATAAAGGAGGCAGTTCTTAA+TGG | 0.339071 | 5_4:-18816899 | Msa0841970:CDS |
| GGGTCTAGTTGCTGGTATTA+GGG | 0.341623 | 5_4:-18812681 | Msa0841970:CDS |
| CACATTGGGACATTAGCTTT+TGG | 0.345362 | 5_4:-18815264 | Msa0841970:CDS |
| TGATTTAGAAAGACTTTAAT+GGG | 0.346240 | 5_4:-18812476 | Msa0841970:intron |
| AATCCCTTCCTTGTCCCCTT+TGG | 0.350778 | 5_4:-18818856 | Msa0841970:CDS |
| TCGAGCATCGAGTGGTGATT+TGG | 0.351443 | 5_4:-18815915 | Msa0841970:CDS |
| TTTATCAACAGTTGCCATCT+TGG | 0.353309 | 5_4:+18815736 | None:intergenic |
| GCCTAAGTTGGTAGAACCTT+TGG | 0.367143 | 5_4:-18818047 | Msa0841970:CDS |
| AGAATGCTTAGGGTTGAAAA+AGG | 0.370003 | 5_4:+18818883 | None:intergenic |
| TTCTCTGCATTTGAGGATGC+AGG | 0.375358 | 5_4:-18811166 | Msa0841970:CDS |
| TAGAAACGGGACACAAGTTC+AGG | 0.377165 | 5_4:-18810893 | Msa0841970:CDS |
| TGCACAAAGCGCAGTATCTA+AGG | 0.381372 | 5_4:-18816155 | Msa0841970:intron |
| AGAAGCTTCGTAAAGCTTCC+TGG | 0.381601 | 5_4:-18815697 | Msa0841970:CDS |
| CTTCATACAAAATATGTTCC+TGG | 0.382795 | 5_4:-18811833 | Msa0841970:CDS |
| GGTCTTTAGAAAATTTCTTA+AGG | 0.383307 | 5_4:+18815314 | None:intergenic |
| TCAAGAAGAGCACGAATTCC+CGG | 0.388964 | 5_4:+18818665 | None:intergenic |
| AGATGCTTTCTCTGCATTTG+AGG | 0.398525 | 5_4:-18811173 | Msa0841970:CDS |
| CGATTCAAGACTCTCCTGAT+TGG | 0.407241 | 5_4:-18817407 | Msa0841970:CDS |
| AAAATTTGCAACTGTCGATC+TGG | 0.407728 | 5_4:-18811858 | Msa0841970:CDS |
| TACCTTTGCAGACCAAATAA+AGG | 0.408649 | 5_4:-18816915 | Msa0841970:intron |
| TCTGCGATCAACATCATAGA+TGG | 0.409287 | 5_4:+18811799 | None:intergenic |
| GAAGATGAGGGTCTAGTTGC+TGG | 0.410208 | 5_4:-18812689 | Msa0841970:CDS |
| AGGGATTTATGAGAATGCTT+AGG | 0.411147 | 5_4:+18818872 | None:intergenic |
| CAATGGCCTAATTGCAGCTT+AGG | 0.414174 | 5_4:-18810584 | Msa0841970:exon |
| GGGATTTATGAGAATGCTTA+GGG | 0.418338 | 5_4:+18818873 | None:intergenic |
| GATTACCTGCTACTGCTCTT+GGG | 0.426451 | 5_4:-18816183 | Msa0841970:CDS |
| ATACATAATTGTGGTTGTTA+AGG | 0.428752 | 5_4:-18810501 | Msa0841970:three_prime_UTR |
| GAAAATGCCACCGCTGAGAA+TGG | 0.428871 | 5_4:-18816037 | Msa0841970:CDS |
| AAGAGTCCATCCATAACATT+TGG | 0.435222 | 5_4:+18814544 | None:intergenic |
| TGTTCTGTAGGAACGTGATT+TGG | 0.437308 | 5_4:-18818101 | Msa0841970:intron |
| ACAGTTTAACAAAATTGAAC+AGG | 0.437317 | 5_4:-18816849 | Msa0841970:intron |
| GATAGGTTGGCTGTTGTTTG+GGG | 0.438512 | 5_4:-18818013 | Msa0841970:CDS |
| ACCTGCTACTGCTCTTGGGT+TGG | 0.439003 | 5_4:-18816179 | Msa0841970:CDS |
| ACCATTCTTGCTCTTGGAGG+TGG | 0.441175 | 5_4:-18810867 | Msa0841970:CDS |
| AAACTTGGCTTGCTTCCTAC+TGG | 0.443627 | 5_4:+18814168 | None:intergenic |
| TCGCTAAGTGTCTTCCAATC+AGG | 0.444065 | 5_4:+18817393 | None:intergenic |
| TTTAAAGCTGAGGTTGGAAA+AGG | 0.445783 | 5_4:-18815867 | Msa0841970:CDS |
| TACACAGGCTGTTGTAGAAA+CGG | 0.446001 | 5_4:-18810907 | Msa0841970:intron |
| GGAAAAGGAAGAAGACCAAA+GGG | 0.448040 | 5_4:+18818841 | None:intergenic |
| ACACAGGCTGTTGTAGAAAC+GGG | 0.450144 | 5_4:-18810906 | Msa0841970:intron |
| AGTGCCAGCACGATAAGTTC+TGG | 0.452574 | 5_4:+18812388 | None:intergenic |
| AGCTGATGATTTGACACATT+GGG | 0.453880 | 5_4:-18815278 | Msa0841970:CDS |
| GCCACCTCCAAGAGCAAGAA+TGG | 0.454854 | 5_4:+18810866 | None:intergenic |
| TAATCATCTCAAAGCTGTTA+AGG | 0.456249 | 5_4:-18817984 | Msa0841970:CDS |
| TACTTGTTCGGCTTCTTCCA+TGG | 0.461561 | 5_4:-18818777 | Msa0841970:CDS |
| TGCATTTGAGGATGCAGGAT+TGG | 0.466218 | 5_4:-18811161 | Msa0841970:CDS |
| GAGACCATTCTTGCTCTTGG+AGG | 0.466637 | 5_4:-18810870 | Msa0841970:CDS |
| TTCTAAAGACCAGGGTGCAT+TGG | 0.468313 | 5_4:-18815302 | Msa0841970:CDS |
| CTCTATCCTAAGCTGCAATT+AGG | 0.469049 | 5_4:+18810578 | None:intergenic |
| CTAATTGCAGCTTAGGATAG+AGG | 0.471602 | 5_4:-18810577 | Msa0841970:exon |
| GCTTCTGATATACGTCTTCT+GGG | 0.472090 | 5_4:+18812420 | None:intergenic |
| TTCATACAAAATATGTTCCT+GGG | 0.472245 | 5_4:-18811832 | Msa0841970:CDS |
| ACCTTGTACTGCAGCATCCC+AGG | 0.474341 | 5_4:+18815679 | None:intergenic |
| TTGTGTCTGAGCAATGCATC+TGG | 0.474510 | 5_4:+18810604 | None:intergenic |
| GAAGTGCGTGTCCAAATTCA+TGG | 0.479227 | 5_4:+18812729 | None:intergenic |
| AAAATGCCACCGCTGAGAAT+GGG | 0.481659 | 5_4:-18816036 | Msa0841970:CDS |
| GTTATTGTAGTTGAGAAGCT+TGG | 0.482142 | 5_4:+18815844 | None:intergenic |
| AACGGAGTGTGGAACCTTCG+TGG | 0.487427 | 5_4:-18818069 | Msa0841970:CDS |
| TCCTGGGATGCTGCAGTACA+AGG | 0.493226 | 5_4:-18815680 | Msa0841970:intron |
| TGAAGCGAAGCACGTGAGAC+CGG | 0.496227 | 5_4:-18818684 | Msa0841970:CDS |
| TTCGCTTCAACAACATCAAA+AGG | 0.496612 | 5_4:+18818698 | None:intergenic |
| TCACGGAATGTCATTAAACT+TGG | 0.498854 | 5_4:+18814153 | None:intergenic |
| TGAATCAATGCAGAAGGAAA+AGG | 0.499062 | 5_4:+18818826 | None:intergenic |
| ATCAAGAGCAGAAGCAGCCA+TGG | 0.501446 | 5_4:+18818760 | None:intergenic |
| GAAGAAGACCAAAGGGGACA+AGG | 0.501580 | 5_4:+18818848 | None:intergenic |
| CTGAGCAATGCATCTGGTGT+TGG | 0.501895 | 5_4:+18810610 | None:intergenic |
| AAGTACCTGCACATCTTCAA+TGG | 0.503459 | 5_4:+18817940 | None:intergenic |
| AAAGCTCATTACAGATAAGA+AGG | 0.504735 | 5_4:-18816215 | Msa0841970:CDS |
| TCCAAAGGTTCTACCAACTT+AGG | 0.505439 | 5_4:+18818046 | None:intergenic |
| TTGTTAGGTGGATATGCAGC+TGG | 0.507023 | 5_4:-18811362 | Msa0841970:intron |
| CGCCTGATGGTAACTCATCA+AGG | 0.512302 | 5_4:-18814227 | Msa0841970:CDS |
| GCCAGCTGACGGTCTAGCTC+CGG | 0.513713 | 5_4:-18814485 | Msa0841970:intron |
| GCCAACCCAAGAGCAGTAGC+AGG | 0.516424 | 5_4:+18816178 | None:intergenic |
| GCTTTGAACGCATTATAAAG+AGG | 0.517387 | 5_4:+18817429 | None:intergenic |
| ACAGATAAGAAGGAGATTGA+AGG | 0.520338 | 5_4:-18816205 | Msa0841970:CDS |
| AGGAATCTGTCCTCTGGCAA+TGG | 0.520908 | 5_4:+18811749 | None:intergenic |
| TTCAGCCATTGAAGATGTGC+AGG | 0.521027 | 5_4:-18817945 | Msa0841970:intron |
| TCTCTGCCAAATGTTATGGA+TGG | 0.522804 | 5_4:-18814550 | Msa0841970:CDS |
| TTTCGTGTCAAAGATTCCTC+AGG | 0.523767 | 5_4:-18814351 | Msa0841970:CDS |
| AACCTTGATGAGTTACCATC+AGG | 0.524848 | 5_4:+18814225 | None:intergenic |
| CTGCAAAGGAATCTGTCCTC+TGG | 0.524924 | 5_4:+18811743 | None:intergenic |
| AAAACAAACTCCTTCAAAAG+AGG | 0.528565 | 5_4:+18818725 | None:intergenic |
| ACCGGAGCTAGACCGTCAGC+TGG | 0.528990 | 5_4:+18814484 | None:intergenic |
| ATAGGTTGGCTGTTGTTTGG+GGG | 0.531375 | 5_4:-18818012 | Msa0841970:CDS |
| TGAGCATGTTTGATATAAGA+AGG | 0.536126 | 5_4:+18818990 | None:intergenic |
| GGAGAAGATTGTGGATAGGT+TGG | 0.537085 | 5_4:-18818026 | Msa0841970:CDS |
| TGCATGACTGCAATATAACT+TGG | 0.537134 | 5_4:+18815989 | None:intergenic |
| GCCGCCAGAACTTATCGTGC+TGG | 0.539991 | 5_4:-18812392 | Msa0841970:CDS |
| AGAACCTTTGGAGAAGATTG+TGG | 0.540574 | 5_4:-18818035 | Msa0841970:CDS |
| GAAGCTTCGTAAAGCTTCCT+GGG | 0.542327 | 5_4:-18815696 | Msa0841970:CDS |
| ATATATGACTGAAGCTGCAA+AGG | 0.543109 | 5_4:+18811729 | None:intergenic |
| TTGCACACCATGTGGGCCAC+AGG | 0.544073 | 5_4:+18814201 | None:intergenic |
| AGGAAAAGGAAGAAGACCAA+AGG | 0.546451 | 5_4:+18818840 | None:intergenic |
| GAAGCGAAGCACGTGAGACC+GGG | 0.547614 | 5_4:-18818683 | Msa0841970:CDS |
| TCTGTAGGAACGTGATTTGG+AGG | 0.549045 | 5_4:-18818098 | Msa0841970:intron |
| AGTCGTGTACTGTCGCCTGA+TGG | 0.549429 | 5_4:-18814240 | Msa0841970:CDS |
| GGAACCTTCGTGGCCTAAGT+TGG | 0.549948 | 5_4:-18818059 | Msa0841970:CDS |
| GGTTAGCATGGCAACCAAGA+TGG | 0.553217 | 5_4:-18815750 | Msa0841970:CDS |
| GGAGGAGCTTGAACGGAGTG+TGG | 0.554314 | 5_4:-18818080 | Msa0841970:CDS |
| CTGGTATTAGGGGAATAGAG+TGG | 0.554763 | 5_4:-18812670 | Msa0841970:CDS |
| CTGGTGTTGGTTCTCTCCCA+CGG | 0.555391 | 5_4:+18810623 | None:intergenic |
| CATTATCTTTCAGGTTAGCA+TGG | 0.555932 | 5_4:-18815762 | Msa0841970:intron |
| GTGATTTGGAGGAGCTTGAA+CGG | 0.556023 | 5_4:-18818087 | Msa0841970:CDS |
| TGGCACTCAAAGTCTTCGAC+AGG | 0.557047 | 5_4:-18812372 | Msa0841970:intron |
| AAGACCAAAGGGGACAAGGA+AGG | 0.557340 | 5_4:+18818852 | None:intergenic |
| AGACTTCCTCACGCAGAGAA+CGG | 0.558595 | 5_4:+18815954 | None:intergenic |
| TCTTATATCAAACATGCTCA+TGG | 0.559336 | 5_4:-18818987 | Msa0841970:CDS |
| CTTTGGAGAAGATTGTGGAT+AGG | 0.559597 | 5_4:-18818030 | Msa0841970:CDS |
| TTCATCCATAGGAGCTGGAA+AGG | 0.560102 | 5_4:-18816288 | Msa0841970:intron |
| TAGGTGTTTGTGCAATTCCG+TGG | 0.562292 | 5_4:-18810640 | Msa0841970:CDS |
| GTTAAGTTTCAGCTTAGACT+AGG | 0.564326 | 5_4:-18817462 | Msa0841970:CDS |
| ATCTCAATTCTCACCTCAAG+TGG | 0.569275 | 5_4:+18810837 | None:intergenic |
| AGACCAAAGGGGACAAGGAA+GGG | 0.570214 | 5_4:+18818853 | None:intergenic |
| AAGGTTGCCTGTGGCCCACA+TGG | 0.572152 | 5_4:-18814208 | Msa0841970:CDS |
| GTGAAGTGAATCAATGCAGA+AGG | 0.581186 | 5_4:+18818820 | None:intergenic |
| TGGGCCATGGGTAATTACAT+TGG | 0.581788 | 5_4:-18816017 | Msa0841970:CDS |
| AGAAACGGGACACAAGTTCA+GGG | 0.585165 | 5_4:-18810892 | Msa0841970:CDS |
| AGGTGGCAAGCCACCACTTG+AGG | 0.586218 | 5_4:-18810850 | Msa0841970:intron |
| CTTGGCTTGCTTCCTACTGG+AGG | 0.587354 | 5_4:+18814171 | None:intergenic |
| AATCTGTCCTCTGGCAATGG+AGG | 0.587690 | 5_4:+18811752 | None:intergenic |
| CACCGCTGAGAATGGGCCAT+GGG | 0.587887 | 5_4:-18816029 | Msa0841970:CDS |
| GTGTTTGATTGCACACCATG+TGG | 0.591264 | 5_4:+18814193 | None:intergenic |
| CAAGAAGTGCGTTTAAGAAG+AGG | 0.592964 | 5_4:+18818908 | None:intergenic |
| CTATCCACAATCTTCTCCAA+AGG | 0.594046 | 5_4:+18818031 | None:intergenic |
| CCATGGCCCATTCTCAGCGG+TGG | 0.595708 | 5_4:+18816030 | None:intergenic |
| ATCAAAATATGACATTAATG+AGG | 0.597730 | 5_4:-18815224 | Msa0841970:intron |
| CATGCTTACTAGGGAAGATG+AGG | 0.600428 | 5_4:-18812702 | Msa0841970:CDS |
| ACTTCAACACATGCTTACTA+GGG | 0.601967 | 5_4:-18812711 | Msa0841970:CDS |
| GCACATCTTCAATGGCTGAA+CGG | 0.602014 | 5_4:+18817948 | None:intergenic |
| GCATCCAATGTAATTACCCA+TGG | 0.603781 | 5_4:+18816013 | None:intergenic |
| CCACCGCTGAGAATGGGCCA+TGG | 0.605460 | 5_4:-18816030 | Msa0841970:CDS |
| ATTACAATGATACATAATTG+TGG | 0.609498 | 5_4:-18810510 | Msa0841970:three_prime_UTR |
| GGTCTAGTTGCTGGTATTAG+GGG | 0.609680 | 5_4:-18812680 | Msa0841970:CDS |
| TGGTATTAGGGGAATAGAGT+GGG | 0.609977 | 5_4:-18812669 | Msa0841970:CDS |
| TGCAGGATTGGATGATAACA+AGG | 0.611790 | 5_4:-18811149 | Msa0841970:intron |
| TCAATTCTCACCTCAAGTGG+TGG | 0.612691 | 5_4:+18810840 | None:intergenic |
| AGCTGGATACTATAGCTACA+AGG | 0.613270 | 5_4:-18811345 | Msa0841970:intron |
| ATTGAAATTGAGCCAGCTGA+CGG | 0.620834 | 5_4:-18814496 | Msa0841970:CDS |
| ATAGGCAACTGGACTGCCTG+AGG | 0.621371 | 5_4:+18814335 | None:intergenic |
| AAGAAGTGCGTTTAAGAAGA+GGG | 0.621610 | 5_4:+18818909 | None:intergenic |
| AAGCTGATGATTTGACACAT+TGG | 0.621920 | 5_4:-18815279 | Msa0841970:CDS |
| TCGCAACCGTTCTCTGCGTG+AGG | 0.623634 | 5_4:-18815960 | Msa0841970:CDS |
| CATCAGCTTCCAATGCACCC+TGG | 0.627389 | 5_4:+18815293 | None:intergenic |
| TCATACAAAATATGTTCCTG+GGG | 0.636482 | 5_4:-18811831 | Msa0841970:CDS |
| GATGCATTGCTCAGACACAA+TGG | 0.636669 | 5_4:-18810601 | Msa0841970:CDS |
| TAACTCATCAAGGTTGCCTG+TGG | 0.655153 | 5_4:-18814217 | Msa0841970:CDS |
| CAACTACAATAACTATGCAG+AGG | 0.660462 | 5_4:-18815834 | Msa0841970:intron |
| AGGTGTTTGTGCAATTCCGT+GGG | 0.660849 | 5_4:-18810639 | Msa0841970:CDS |
| GCCAGCACGATAAGTTCTGG+CGG | 0.666421 | 5_4:+18812391 | None:intergenic |
| TCTACCAACTTAGGCCACGA+AGG | 0.670141 | 5_4:+18818055 | None:intergenic |
| TATTTAACTCGAGCATCGAG+TGG | 0.674265 | 5_4:-18815923 | Msa0841970:CDS |
| AGTGATTCCTCCATTGCCAG+AGG | 0.676653 | 5_4:-18811759 | Msa0841970:CDS |
| CTTTGCAGACCAAATAAAGG+AGG | 0.678762 | 5_4:-18816912 | Msa0841970:intron |
| AGAGTGAGAATGTGAGTGTG+AGG | 0.679163 | 5_4:+18818957 | None:intergenic |
| ATGCTCGAGTTAAATATGCA+CGG | 0.684859 | 5_4:+18815930 | None:intergenic |
| GCTTCAACAACATCAAAAGG+AGG | 0.685808 | 5_4:+18818701 | None:intergenic |
| TGCAATCAAACACCTCCAGT+AGG | 0.695303 | 5_4:-18814183 | Msa0841970:CDS |
| TACCCATGGCCCATTCTCAG+CGG | 0.698386 | 5_4:+18816027 | None:intergenic |
| GAAAAGGAAGAAGACCAAAG+GGG | 0.709033 | 5_4:+18818842 | None:intergenic |
| ATGCTTACTAGGGAAGATGA+GGG | 0.715837 | 5_4:-18812701 | Msa0841970:CDS |
| TGTTTGATTGCACACCATGT+GGG | 0.716151 | 5_4:+18814194 | None:intergenic |
| AAGTTTAATGACATTCCGTG+AGG | 0.718648 | 5_4:-18814151 | Msa0841970:intron |
| GAAGCCGAACAAGTAAACGA+AGG | 0.720648 | 5_4:+18818785 | None:intergenic |
| CATACAAAATATGTTCCTGG+GGG | 0.748795 | 5_4:-18811830 | Msa0841970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACTATTT+TGG | + | chr5_4:18813918-18813937 | None:intergenic | 10.0% |
| !! | GTATTAAATATTAAATTATG+TGG | + | chr5_4:18814373-18814392 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr5_4:18815847-18815866 | Msa0841970:CDS | 10.0% |
| !! | ATTAATAAGTTATACAAAAA+TGG | - | chr5_4:18816467-18816486 | Msa0841970:intron | 10.0% |
| !!! | TGAATTTTTAATGATTAATA+AGG | + | chr5_4:18816628-18816647 | None:intergenic | 10.0% |
| !!! | AATATAATGTTATTTTACAA+AGG | + | chr5_4:18816912-18816931 | None:intergenic | 10.0% |
| !! | TTCAAATAAAAATATAGAAA+AGG | + | chr5_4:18817116-18817135 | None:intergenic | 10.0% |
| !!! | TTTTTTTCAAAATAAAATTG+TGG | + | chr5_4:18818889-18818908 | None:intergenic | 10.0% |
| !! | ATAATAATGTGTTACAATTA+TGG | + | chr5_4:18811854-18811873 | None:intergenic | 15.0% |
| !!! | TGTATATGTATATATTGATT+TGG | - | chr5_4:18813870-18813889 | Msa0841970:intron | 15.0% |
| !! | TTTGTAATTGCATAAAATAA+AGG | - | chr5_4:18814509-18814528 | Msa0841970:CDS | 15.0% |
| !! | AATACATAAGAGTAAAATAT+GGG | + | chr5_4:18815313-18815332 | None:intergenic | 15.0% |
| !! | AAATACATAAGAGTAAAATA+TGG | + | chr5_4:18815314-18815333 | None:intergenic | 15.0% |
| !! | TTTAAAAGAAAAAAAACGTT+GGG | + | chr5_4:18815529-18815548 | None:intergenic | 15.0% |
| !!! | TTTTAAAAGAAAAAAAACGT+TGG | + | chr5_4:18815530-18815549 | None:intergenic | 15.0% |
| !! | AATTTATGTTGAAAATTATG+AGG | - | chr5_4:18815640-18815659 | Msa0841970:intron | 15.0% |
| !! | TGTATATAGTATTAATTGAA+GGG | - | chr5_4:18815876-18815895 | Msa0841970:CDS | 15.0% |
| !!! | TTTTGAAACAGTTTTTTTTT+TGG | - | chr5_4:18815952-18815971 | Msa0841970:CDS | 15.0% |
| !! | AACTAAAGTTATTAAGAAAT+AGG | + | chr5_4:18816288-18816307 | None:intergenic | 15.0% |
| !! | ATTTCTTAATAACTTTAGTT+TGG | - | chr5_4:18816288-18816307 | Msa0841970:intron | 15.0% |
| !!! | TTTCTTAATAACTTTAGTTT+GGG | - | chr5_4:18816289-18816308 | Msa0841970:intron | 15.0% |
| !!! | TTTATATTGTTACTTACTTA+TGG | + | chr5_4:18816835-18816854 | None:intergenic | 15.0% |
| !! | ACAAAGATATAAACTTTATA+TGG | + | chr5_4:18816859-18816878 | None:intergenic | 15.0% |
| !!! | TATTAACCAAAGTTATTTTT+TGG | + | chr5_4:18817819-18817838 | None:intergenic | 15.0% |
| !!! | TTTATAATTGTCGTTTTTTT+AGG | + | chr5_4:18817986-18818005 | None:intergenic | 15.0% |
| !! | AAATGACTATATATATCTTA+TGG | - | chr5_4:18818199-18818218 | Msa0841970:intron | 15.0% |
| !! | TCTTAGTAAATAAATACAAT+AGG | + | chr5_4:18818440-18818459 | None:intergenic | 15.0% |
| !!! | GGTATAAAGTTTAAAACTTT+TGG | - | chr5_4:18810799-18810818 | Msa0841970:intron | 20.0% |
| !!! | AAAACTTTTGGATTGTTTAT+TGG | - | chr5_4:18810811-18810830 | Msa0841970:intron | 20.0% |
| !!! | AAACTTTTGGATTGTTTATT+GGG | - | chr5_4:18810812-18810831 | Msa0841970:intron | 20.0% |
| !!! | TTTATTGGGTTTTGATTAAT+GGG | - | chr5_4:18810826-18810845 | Msa0841970:intron | 20.0% |
| !!! | TTTCAACTTTTGTTTTGTTT+TGG | - | chr5_4:18810912-18810931 | Msa0841970:intron | 20.0% |
| !!! | TCATTTTCTTAAACAAATAC+CGG | + | chr5_4:18811114-18811133 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGTTTCATTAA+TGG | - | chr5_4:18811234-18811253 | Msa0841970:intron | 20.0% |
| !!! | TGATTTTGTGTTTCATTAAT+GGG | - | chr5_4:18811235-18811254 | Msa0841970:intron | 20.0% |
| !!! | TGATTTTTTGTTTTGACTAA+TGG | - | chr5_4:18811296-18811315 | Msa0841970:intron | 20.0% |
| !!! | GATTTTTTGTTTTGACTAAT+GGG | - | chr5_4:18811297-18811316 | Msa0841970:intron | 20.0% |
| !!! | ATTTTTTGTTTTGACTAATG+GGG | - | chr5_4:18811298-18811317 | Msa0841970:intron | 20.0% |
| !! | CATGAAAATATCTTAAACAA+GGG | + | chr5_4:18811888-18811907 | None:intergenic | 20.0% |
| !!! | CTTGTTTAAGATATTTTCAT+GGG | - | chr5_4:18811887-18811906 | Msa0841970:intron | 20.0% |
| !! | TTGATATTTGACTGATAATA+TGG | - | chr5_4:18812360-18812379 | Msa0841970:intron | 20.0% |
| !!! | TTTTAACAACTGAAAACAAA+TGG | - | chr5_4:18812616-18812635 | Msa0841970:intron | 20.0% |
| !! | CTATATCCTATATCTATTTA+TGG | - | chr5_4:18812716-18812735 | Msa0841970:CDS | 20.0% |
| !! | AAAGGTTATCAGAAAAATTT+GGG | - | chr5_4:18813165-18813184 | Msa0841970:intron | 20.0% |
| !! | TTAAGAACATAATTCTATGT+AGG | - | chr5_4:18813640-18813659 | Msa0841970:intron | 20.0% |
| !!! | TTTTTTCAATTAGCTAGTAT+GGG | - | chr5_4:18813835-18813854 | Msa0841970:intron | 20.0% |
| !! | TTAATTAGATGTTGGAAATT+TGG | + | chr5_4:18813959-18813978 | None:intergenic | 20.0% |
| !! | ATCAAAATATGACATTAATG+AGG | - | chr5_4:18814211-18814230 | Msa0841970:CDS | 20.0% |
| !! | AGAAATAAATTAAGCATATC+TGG | - | chr5_4:18814327-18814346 | Msa0841970:CDS | 20.0% |
| !! | TTAGATAAATTTGGAGAAAA+AGG | + | chr5_4:18814597-18814616 | None:intergenic | 20.0% |
| !! | TCCAAATTTATCTAACTAAT+GGG | - | chr5_4:18814602-18814621 | Msa0841970:intron | 20.0% |
| !! | AAGGTAATAAAATCTTGTAT+TGG | + | chr5_4:18814767-18814786 | None:intergenic | 20.0% |
| !!! | TATTACCTTTAACAATGTTT+TGG | - | chr5_4:18814778-18814797 | Msa0841970:intron | 20.0% |
| !!! | TATTTAAGTTATCTTTGACA+TGG | + | chr5_4:18815462-18815481 | None:intergenic | 20.0% |
| !!! | TTAGACCAAAAATTTAAGTT+CGG | + | chr5_4:18815563-18815582 | None:intergenic | 20.0% |
| !! | GTGTATATAGTATTAATTGA+AGG | - | chr5_4:18815875-18815894 | Msa0841970:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr5_4:18815910-18815929 | Msa0841970:CDS | 20.0% |
| !! | GTATAAAACAAGTGATAATT+TGG | + | chr5_4:18816507-18816526 | None:intergenic | 20.0% |
| !! | TTTATACTAGTAAACTTTCA+AGG | - | chr5_4:18816520-18816539 | Msa0841970:intron | 20.0% |
| !!! | ATATGAAAGATTAGTTTAAC+AGG | + | chr5_4:18816562-18816581 | None:intergenic | 20.0% |
| !! | TTGATTTAGAAAGACTTTAA+TGG | - | chr5_4:18816958-18816977 | Msa0841970:intron | 20.0% |
| !! | TGATTTAGAAAGACTTTAAT+GGG | - | chr5_4:18816959-18816978 | Msa0841970:intron | 20.0% |
| !!! | ATTATTTTACTCTTTGCTAA+TGG | - | chr5_4:18817147-18817166 | Msa0841970:intron | 20.0% |
| !!! | ATAACTATTCTTTTTTCTTG+TGG | - | chr5_4:18817236-18817255 | Msa0841970:intron | 20.0% |
| !! | GGTATAAAAATGTAAAAGAT+TGG | + | chr5_4:18817312-18817331 | None:intergenic | 20.0% |
| !!! | TGTTTTAAAGCAAAAGAAAA+TGG | + | chr5_4:18817333-18817352 | None:intergenic | 20.0% |
| !! | ACTTTGATTGTAATCTATAT+TGG | - | chr5_4:18817546-18817565 | Msa0841970:intron | 20.0% |
| !! | TAATGAGTGAATAAAAAGTA+AGG | + | chr5_4:18817860-18817879 | None:intergenic | 20.0% |
| !!! | TAAAATAGTTGATAAAGACA+AGG | - | chr5_4:18817889-18817908 | Msa0841970:intron | 20.0% |
| !!! | CTCATTTTATTTCATTTTTC+TGG | - | chr5_4:18818041-18818060 | Msa0841970:CDS | 20.0% |
| !!! | TTGTATTGCTTTGATAATTA+TGG | - | chr5_4:18818119-18818138 | Msa0841970:intron | 20.0% |
| !! | TTGTATATTTACATTTACAC+AGG | - | chr5_4:18818513-18818532 | Msa0841970:intron | 20.0% |
| !! | ATTACAATGATACATAATTG+TGG | - | chr5_4:18818925-18818944 | Msa0841970:CDS | 20.0% |
| !!! | GTTTATTGGGTTTTGATTAA+TGG | - | chr5_4:18810825-18810844 | Msa0841970:intron | 25.0% |
| !!! | TTTTGTTTTGGATTGTTTAC+TGG | - | chr5_4:18810924-18810943 | Msa0841970:intron | 25.0% |
| !!! | TTTGTTTTGGATTGTTTACT+GGG | - | chr5_4:18810925-18810944 | Msa0841970:intron | 25.0% |
| !! | TTTGATTAATGGCTTTTGAT+TGG | - | chr5_4:18810949-18810968 | Msa0841970:intron | 25.0% |
| !!! | TGATTTTGTGTTTTGATTAG+TGG | - | chr5_4:18811021-18811040 | Msa0841970:intron | 25.0% |
| !!! | GATTTTGTGTTTTGATTAGT+GGG | - | chr5_4:18811022-18811041 | Msa0841970:intron | 25.0% |
| !!! | GGTTTTGTATTTAGCTTAAT+TGG | - | chr5_4:18811266-18811285 | Msa0841970:intron | 25.0% |
| ! | TTTAGTATTACTATGATGAC+TGG | - | chr5_4:18811597-18811616 | Msa0841970:intron | 25.0% |
| ! | TGAATTGCATGTTATCAAAT+AGG | - | chr5_4:18811652-18811671 | Msa0841970:intron | 25.0% |
| ! | GAATTGCATGTTATCAAATA+GGG | - | chr5_4:18811653-18811672 | Msa0841970:intron | 25.0% |
| ! | AATTGACAATACTGATGATT+TGG | - | chr5_4:18811789-18811808 | Msa0841970:CDS | 25.0% |
| ! | CCATGAAAATATCTTAAACA+AGG | + | chr5_4:18811889-18811908 | None:intergenic | 25.0% |
| !!! | CCTTGTTTAAGATATTTTCA+TGG | - | chr5_4:18811886-18811905 | Msa0841970:intron | 25.0% |
| !!! | GTATTTTATTTCTCCTGTAT+TGG | - | chr5_4:18812133-18812152 | Msa0841970:intron | 25.0% |
| ! | ATAAAATAACATGCCAATAC+AGG | + | chr5_4:18812149-18812168 | None:intergenic | 25.0% |
| ! | TAGATTTATAACAGGTAAGA+TGG | - | chr5_4:18812224-18812243 | Msa0841970:intron | 25.0% |
| ! | TTAGAGTAATTCATTGTCTT+TGG | - | chr5_4:18812455-18812474 | Msa0841970:CDS | 25.0% |
| ! | ACAGTTTAACAAAATTGAAC+AGG | - | chr5_4:18812586-18812605 | Msa0841970:intron | 25.0% |
| ! | TTGCTTCCATAAATAGATAT+AGG | + | chr5_4:18812725-18812744 | None:intergenic | 25.0% |
| ! | TTGTCCTATTTATTTGTAAG+CGG | + | chr5_4:18812827-18812846 | None:intergenic | 25.0% |
| ! | GAAAGGTTATCAGAAAAATT+TGG | - | chr5_4:18813164-18813183 | Msa0841970:intron | 25.0% |
| ! | AAGGTTATCAGAAAAATTTG+GGG | - | chr5_4:18813166-18813185 | Msa0841970:intron | 25.0% |
| !! | AATGAGCTTTTCAAACTTTT+TGG | + | chr5_4:18813210-18813229 | None:intergenic | 25.0% |
| !!! | GTTTTTTCAATTAGCTAGTA+TGG | - | chr5_4:18813834-18813853 | Msa0841970:intron | 25.0% |
| !!! | TTTTTCAATTAGCTAGTATG+GGG | - | chr5_4:18813836-18813855 | Msa0841970:intron | 25.0% |
| ! | TGGAATAGTAAATGACAATA+AGG | + | chr5_4:18813898-18813917 | None:intergenic | 25.0% |
| ! | ATGTCTGATTAATTAGATGT+TGG | + | chr5_4:18813967-18813986 | None:intergenic | 25.0% |
| !! | GGTCTTTAGAAAATTTCTTA+AGG | + | chr5_4:18814124-18814143 | None:intergenic | 25.0% |
| !!! | TAAGAAATTTTCTAAAGACC+AGG | - | chr5_4:18814124-18814143 | Msa0841970:intron | 25.0% |
| !!! | AAGAAATTTTCTAAAGACCA+GGG | - | chr5_4:18814125-18814144 | Msa0841970:intron | 25.0% |
| !! | AAAGACACTTTAAGAACATA+AGG | - | chr5_4:18814271-18814290 | Msa0841970:CDS | 25.0% |
| !!! | ACTTTAAGAACATAAGGTTT+TGG | - | chr5_4:18814277-18814296 | Msa0841970:CDS | 25.0% |
| !! | CAATATTTTATACAGCTTGA+AGG | - | chr5_4:18814423-18814442 | Msa0841970:intron | 25.0% |
| ! | TTTGAAAAACTGTTATGTCA+AGG | - | chr5_4:18814451-18814470 | Msa0841970:intron | 25.0% |
| ! | CTCCAAATTTATCTAACTAA+TGG | - | chr5_4:18814601-18814620 | Msa0841970:intron | 25.0% |
| ! | TCCCATTAGTTAGATAAATT+TGG | + | chr5_4:18814606-18814625 | None:intergenic | 25.0% |
| ! | AAAACCATATACTATAACTG+GGG | + | chr5_4:18814710-18814729 | None:intergenic | 25.0% |
| ! | GAAAACCATATACTATAACT+GGG | + | chr5_4:18814711-18814730 | None:intergenic | 25.0% |
| ! | AGAAAACCATATACTATAAC+TGG | + | chr5_4:18814712-18814731 | None:intergenic | 25.0% |
| !!! | TCTTGTATTGGTTAGTAAAT+TGG | + | chr5_4:18814755-18814774 | None:intergenic | 25.0% |
| ! | AAAGACCAAAACATTGTTAA+AGG | + | chr5_4:18814786-18814805 | None:intergenic | 25.0% |
| ! | ACAAATGATTACTGTTATTC+AGG | - | chr5_4:18815038-18815057 | Msa0841970:intron | 25.0% |
| ! | TCAAAATAAAAATAGGCAAC+TGG | + | chr5_4:18815114-18815133 | None:intergenic | 25.0% |
| ! | GTAGGGATCAAAATAAAAAT+AGG | + | chr5_4:18815121-18815140 | None:intergenic | 25.0% |
| ! | TTAATTAAAGTGGCACTAAT+GGG | + | chr5_4:18815490-18815509 | None:intergenic | 25.0% |
| ! | ATTAATTAAAGTGGCACTAA+TGG | + | chr5_4:18815491-18815510 | None:intergenic | 25.0% |
| ! | TTAGATAACAGAAAAGTAAC+AGG | - | chr5_4:18815664-18815683 | Msa0841970:intron | 25.0% |
| ! | AAGAATAAGGACTTTGAATA+TGG | - | chr5_4:18815687-18815706 | Msa0841970:CDS | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | + | chr5_4:18815731-18815750 | None:intergenic | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | - | chr5_4:18815732-18815751 | Msa0841970:CDS | 25.0% |
| ! | GCATTAATTAAAAGAAAGAG+AGG | - | chr5_4:18815778-18815797 | Msa0841970:intron | 25.0% |
| ! | AATAGTTGATTGGGATAATT+TGG | + | chr5_4:18815814-18815833 | None:intergenic | 25.0% |
| ! | AAATTATCCCAATCAACTAT+TGG | - | chr5_4:18815813-18815832 | Msa0841970:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+GGG | + | chr5_4:18815823-18815842 | None:intergenic | 25.0% |
| ! | AAAACAAACCAATAGTTGAT+TGG | + | chr5_4:18815824-18815843 | None:intergenic | 25.0% |
| ! | GTTAAAGATTTAAACCTGAA+TGG | - | chr5_4:18816370-18816389 | Msa0841970:intron | 25.0% |
| ! | AATATTGATATGTACCATTC+AGG | + | chr5_4:18816387-18816406 | None:intergenic | 25.0% |
| ! | GTTTATATCTTTGTCTTGAA+TGG | - | chr5_4:18816865-18816884 | Msa0841970:CDS | 25.0% |
| !!! | ATTGCAAAACATTTTGAAAC+TGG | - | chr5_4:18816983-18817002 | Msa0841970:intron | 25.0% |
| !!! | TTGCAAAACATTTTGAAACT+GGG | - | chr5_4:18816984-18817003 | Msa0841970:intron | 25.0% |
| !!! | TTTCTTTTGCTTTAAAACAG+TGG | - | chr5_4:18817334-18817353 | Msa0841970:intron | 25.0% |
| ! | AACAGACACAATAGAAAAAA+AGG | + | chr5_4:18817394-18817413 | None:intergenic | 25.0% |
| ! | TTCATACAAAATATGTTCCT+GGG | - | chr5_4:18817603-18817622 | Msa0841970:intron | 25.0% |
| ! | CACAAACCAAAAAATAACTT+TGG | - | chr5_4:18817810-18817829 | Msa0841970:intron | 25.0% |
| !!! | TGGTTACGTTAACTATTTTT+TGG | + | chr5_4:18817924-18817943 | None:intergenic | 25.0% |
| !!! | CGTTTTGTTTCATATATTGA+AGG | - | chr5_4:18818143-18818162 | Msa0841970:intron | 25.0% |
| ! | ATTAAGAAAAACTGTCGATA+AGG | - | chr5_4:18818320-18818339 | Msa0841970:intron | 25.0% |
| !!! | GCATGTTTTTAGAAAAATAG+AGG | + | chr5_4:18818393-18818412 | None:intergenic | 25.0% |
| ! | ATACATAATTGTGGTTGTTA+AGG | - | chr5_4:18818934-18818953 | Msa0841970:CDS | 25.0% |
| TGAGCATGTTTGATATAAGA+AGG | + | chr5_4:18810448-18810467 | None:intergenic | 30.0% | |
| TCTTATATCAAACATGCTCA+TGG | - | chr5_4:18810448-18810467 | Msa0841970:three_prime_UTR | 30.0% | |
| AAAACAAACTCCTTCAAAAG+AGG | + | chr5_4:18810713-18810732 | None:intergenic | 30.0% | |
| !! | TTTGATTAATGGGTGTTGAT+TGG | - | chr5_4:18810836-18810855 | Msa0841970:intron | 30.0% |
| !!! | TGTTGATTGGTTTTGTGTTT+TGG | - | chr5_4:18810849-18810868 | Msa0841970:intron | 30.0% |
| !!! | TGGTTTTGTGTTTTGGTTAA+TGG | - | chr5_4:18810856-18810875 | Msa0841970:CDS | 30.0% |
| !!! | GGTTTTGTGTTTTGGTTAAT+GGG | - | chr5_4:18810857-18810876 | Msa0841970:CDS | 30.0% |
| !!! | TTTCGATTGGTTTTGTGTTT+GGG | - | chr5_4:18810880-18810899 | Msa0841970:CDS | 30.0% |
| !!! | GTTTACTGGGTTTTGATTAA+TGG | - | chr5_4:18810938-18810957 | Msa0841970:intron | 30.0% |
| !!! | GATTGGTTTTGTGTTTTGAT+TGG | - | chr5_4:18810966-18810985 | Msa0841970:intron | 30.0% |
| !!! | GATTTTGTGTTTTGGTTTGT+GGG | - | chr5_4:18810991-18811010 | Msa0841970:intron | 30.0% |
| TTGAATGTAATCACATGTGT+CGG | - | chr5_4:18811139-18811158 | Msa0841970:intron | 30.0% | |
| ! | ATGCATTCAATCAAAAGTGT+CGG | - | chr5_4:18811194-18811213 | Msa0841970:CDS | 30.0% |
| ! | TTTCATTAATGGGTCTTGAT+TGG | - | chr5_4:18811245-18811264 | Msa0841970:intron | 30.0% |
| TAATCATCTCAAAGCTGTTA+AGG | - | chr5_4:18811451-18811470 | Msa0841970:intron | 30.0% | |
| !!! | GGTACTTTTGGTTTTTGTTT+TGG | - | chr5_4:18811511-18811530 | Msa0841970:intron | 30.0% |
| ATGTGTAATTGTGCATTTCT+CGG | - | chr5_4:18811544-18811563 | Msa0841970:intron | 30.0% | |
| !! | ATACTGATGATTTGGTTTGT+TGG | - | chr5_4:18811797-18811816 | Msa0841970:CDS | 30.0% |
| GTCATCATATGCTAAAATTG+AGG | + | chr5_4:18811823-18811842 | None:intergenic | 30.0% | |
| !! | GTTTAAGATATTTTCATGGG+TGG | - | chr5_4:18811890-18811909 | Msa0841970:intron | 30.0% |
| !! | ATTGCTGTAATTTTGTTTGC+AGG | - | chr5_4:18811942-18811961 | Msa0841970:intron | 30.0% |
| TCAGCTTCTAGATTTATAAC+AGG | - | chr5_4:18812216-18812235 | Msa0841970:intron | 30.0% | |
| TGGAGAATTGTGAAAAATGA+TGG | - | chr5_4:18812244-18812263 | Msa0841970:intron | 30.0% | |
| !! | AAAAATGATGGATGTGTAGT+TGG | - | chr5_4:18812256-18812275 | Msa0841970:intron | 30.0% |
| ! | GTGTGAAGTTTTCTGATTTA+CGG | - | chr5_4:18812278-18812297 | Msa0841970:intron | 30.0% |
| TTAAATTTCCGCTTCATTGT+CGG | - | chr5_4:18812314-18812333 | Msa0841970:intron | 30.0% | |
| ATCAGTCAAATATCAACAAG+TGG | + | chr5_4:18812356-18812375 | None:intergenic | 30.0% | |
| ! | TGAATTACTCTAAGAACAAG+TGG | + | chr5_4:18812448-18812467 | None:intergenic | 30.0% |
| CTGAAAACAAATGGAAATTG+TGG | - | chr5_4:18812625-18812644 | Msa0841970:CDS | 30.0% | |
| !!! | TTCCCATTTTTTCACCATTT+AGG | - | chr5_4:18812671-18812690 | Msa0841970:CDS | 30.0% |
| !!! | TCCCATTTTTTCACCATTTA+GGG | - | chr5_4:18812672-18812691 | Msa0841970:CDS | 30.0% |
| ACCCTAAATGGTGAAAAAAT+GGG | + | chr5_4:18812676-18812695 | None:intergenic | 30.0% | |
| TAGTACATAATCACCCTAAA+TGG | + | chr5_4:18812688-18812707 | None:intergenic | 30.0% | |
| ! | ATTTAGGGTGATTATGTACT+AGG | - | chr5_4:18812687-18812706 | Msa0841970:CDS | 30.0% |
| ! | AATGCCGCTTACAAATAAAT+AGG | - | chr5_4:18812820-18812839 | Msa0841970:intron | 30.0% |
| ! | GAGATTTTCAAAAATCCCAA+AGG | - | chr5_4:18812887-18812906 | Msa0841970:intron | 30.0% |
| ACATATACTGCCAATGAAAT+TGG | + | chr5_4:18812939-18812958 | None:intergenic | 30.0% | |
| ! | TCACTACATTTGGTTTAACT+GGG | + | chr5_4:18812992-18813011 | None:intergenic | 30.0% |
| CAAAATCTTGTCACTACATT+TGG | + | chr5_4:18813002-18813021 | None:intergenic | 30.0% | |
| AAAGCTCATTACAGATAAGA+AGG | - | chr5_4:18813220-18813239 | Msa0841970:intron | 30.0% | |
| ! | TTTGAGTTCTGATTACTTGA+TGG | - | chr5_4:18813357-18813376 | Msa0841970:intron | 30.0% |
| TACTTGATGGAAAAAAATGC+AGG | - | chr5_4:18813370-18813389 | Msa0841970:intron | 30.0% | |
| ACTTGATGGAAAAAAATGCA+GGG | - | chr5_4:18813371-18813390 | Msa0841970:intron | 30.0% | |
| AATTCTATGTAGGTTACTGA+TGG | - | chr5_4:18813650-18813669 | Msa0841970:intron | 30.0% | |
| TGTTTGCTTCATGATTTGAA+TGG | - | chr5_4:18813804-18813823 | Msa0841970:intron | 30.0% | |
| GTTTGCTTCATGATTTGAAT+GGG | - | chr5_4:18813805-18813824 | Msa0841970:intron | 30.0% | |
| AATTAAGCATATCTGGAAGA+AGG | - | chr5_4:18814334-18814353 | Msa0841970:CDS | 30.0% | |
| CAAATGCAGGAACAAAATAA+CGG | + | chr5_4:18814552-18814571 | None:intergenic | 30.0% | |
| TGGCAAAAATATTCAAATGC+AGG | + | chr5_4:18814565-18814584 | None:intergenic | 30.0% | |
| GGATATCCATCTTAGTTAAA+GGG | - | chr5_4:18814623-18814642 | Msa0841970:intron | 30.0% | |
| AAGTACAGTGAACAGAATTA+TGG | + | chr5_4:18814655-18814674 | None:intergenic | 30.0% | |
| AAACCATATACTATAACTGG+GGG | + | chr5_4:18814709-18814728 | None:intergenic | 30.0% | |
| TGGTTAGTAAATTGGTCAAT+GGG | + | chr5_4:18814747-18814766 | None:intergenic | 30.0% | |
| TTGGTTAGTAAATTGGTCAA+TGG | + | chr5_4:18814748-18814767 | None:intergenic | 30.0% | |
| ! | TTGTAACTTTTAATCTGCCT+TGG | - | chr5_4:18814809-18814828 | Msa0841970:intron | 30.0% |
| CATTTGGCAGAGAAAAAAAT+GGG | + | chr5_4:18814878-18814897 | None:intergenic | 30.0% | |
| ACATTTGGCAGAGAAAAAAA+TGG | + | chr5_4:18814879-18814898 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTGCCAAATGTTA+TGG | - | chr5_4:18814881-18814900 | Msa0841970:intron | 30.0% |
| ATAAAAGGGAGTCTAATTAC+CGG | + | chr5_4:18814972-18814991 | None:intergenic | 30.0% | |
| AGAACCACAGATGAATAAAA+GGG | + | chr5_4:18814986-18815005 | None:intergenic | 30.0% | |
| AAGAACCACAGATGAATAAA+AGG | + | chr5_4:18814987-18815006 | None:intergenic | 30.0% | |
| ! | TGATTACTGTTATTCAGGTT+TGG | - | chr5_4:18815043-18815062 | Msa0841970:intron | 30.0% |
| TGTACGAAAAAAAAGTTGTC+TGG | - | chr5_4:18815369-18815388 | Msa0841970:intron | 30.0% | |
| GTACGAAAAAAAAGTTGTCT+GGG | - | chr5_4:18815370-18815389 | Msa0841970:intron | 30.0% | |
| ! | TTACAGGTAGCTGTATTTTA+TGG | - | chr5_4:18815614-18815633 | Msa0841970:intron | 30.0% |
| GAAAAGTAACAGGAAGAATA+AGG | - | chr5_4:18815674-18815693 | Msa0841970:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+TGG | - | chr5_4:18815978-18815997 | Msa0841970:CDS | 30.0% |
| ! | CTTTGATCTTTTGTTCTTGA+TGG | + | chr5_4:18816074-18816093 | None:intergenic | 30.0% |
| TATAATATCACACCATCATC+AGG | + | chr5_4:18816205-18816224 | None:intergenic | 30.0% | |
| TTCACACTTCAATTGAAAAC+AGG | + | chr5_4:18816341-18816360 | None:intergenic | 30.0% | |
| !! | TGAAAGATTAGTTTAACAGG+AGG | + | chr5_4:18816559-18816578 | None:intergenic | 30.0% |
| TGAATTACCTTCTCAGTTTA+TGG | - | chr5_4:18816796-18816815 | Msa0841970:intron | 30.0% | |
| !!! | TGCAAAACATTTTGAAACTG+GGG | - | chr5_4:18816985-18817004 | Msa0841970:intron | 30.0% |
| !! | ATTCCAGAAATCTGTTTTGA+AGG | + | chr5_4:18817206-18817225 | None:intergenic | 30.0% |
| CTTCATACAAAATATGTTCC+TGG | - | chr5_4:18817602-18817621 | Msa0841970:intron | 30.0% | |
| TCATACAAAATATGTTCCTG+GGG | - | chr5_4:18817604-18817623 | Msa0841970:intron | 30.0% | |
| ATCTTAAAAGCCATGTACAA+TGG | + | chr5_4:18817783-18817802 | None:intergenic | 30.0% | |
| !! | TTAGTCGTTTTCAAAACAGA+TGG | + | chr5_4:18817944-18817963 | None:intergenic | 30.0% |
| ! | TTCTGGATTTTGCATTTGTT+AGG | - | chr5_4:18818058-18818077 | Msa0841970:CDS | 30.0% |
| !! | AGGATTTTGCTTTTCTCTTT+AGG | - | chr5_4:18818340-18818359 | Msa0841970:intron | 30.0% |
| !! | GGATTTTGCTTTTCTCTTTA+GGG | - | chr5_4:18818341-18818360 | Msa0841970:intron | 30.0% |
| !!! | CTAGGATTTTTTACCAACTT+TGG | - | chr5_4:18818730-18818749 | Msa0841970:CDS | 30.0% |
| CTTGAACATTTAATGCAATG+TGG | - | chr5_4:18818762-18818781 | Msa0841970:CDS | 30.0% | |
| !!! | GCAATGTGGTTTTTTTATGT+AGG | - | chr5_4:18818776-18818795 | Msa0841970:CDS | 30.0% |
| ! | AAGAAGTGCGTTTAAGAAGA+GGG | + | chr5_4:18810529-18810548 | None:intergenic | 35.0% |
| AGAATGCTTAGGGTTGAAAA+AGG | + | chr5_4:18810555-18810574 | None:intergenic | 35.0% | |
| GGGATTTATGAGAATGCTTA+GGG | + | chr5_4:18810565-18810584 | None:intergenic | 35.0% | |
| AGGGATTTATGAGAATGCTT+AGG | + | chr5_4:18810566-18810585 | None:intergenic | 35.0% | |
| TGAATCAATGCAGAAGGAAA+AGG | + | chr5_4:18810612-18810631 | None:intergenic | 35.0% | |
| TTCACCTTCGTTTACTTGTT+CGG | - | chr5_4:18810646-18810665 | Msa0841970:intron | 35.0% | |
| ! | TGAAGCTAATCCTCTTTTGA+AGG | - | chr5_4:18810700-18810719 | Msa0841970:intron | 35.0% |
| TTCGCTTCAACAACATCAAA+AGG | + | chr5_4:18810740-18810759 | None:intergenic | 35.0% | |
| !! | TTTGGTTAATGGGTTTCGAT+TGG | - | chr5_4:18810867-18810886 | Msa0841970:CDS | 35.0% |
| !!! | GTTTCGATTGGTTTTGTGTT+TGG | - | chr5_4:18810879-18810898 | Msa0841970:CDS | 35.0% |
| !!! | TTCGATTGGTTTTGTGTTTG+GGG | - | chr5_4:18810881-18810900 | Msa0841970:CDS | 35.0% |
| !!! | TGGTTTTGTGTTTTGATTGG+TGG | - | chr5_4:18810969-18810988 | Msa0841970:intron | 35.0% |
| !!! | GATTGGTGGATTTTGTGTTT+TGG | - | chr5_4:18810983-18811002 | Msa0841970:intron | 35.0% |
| !!! | GGATTTTGTGTTTTGGTTTG+TGG | - | chr5_4:18810990-18811009 | Msa0841970:intron | 35.0% |
| TGTTAGTGCTTCATAGATCA+AGG | + | chr5_4:18811048-18811067 | None:intergenic | 35.0% | |
| !! | CTTTTGATTGAATGCATGTC+CGG | + | chr5_4:18811191-18811210 | None:intergenic | 35.0% |
| TGTGTATCATGAAACAATCG+TGG | + | chr5_4:18811712-18811731 | None:intergenic | 35.0% | |
| GTTAAGTTTCAGCTTAGACT+AGG | - | chr5_4:18811973-18811992 | Msa0841970:intron | 35.0% | |
| ! | GCTTTGAACGCATTATAAAG+AGG | + | chr5_4:18812009-18812028 | None:intergenic | 35.0% |
| TGAAAGAACAGGCTGTTATT+GGG | + | chr5_4:18812417-18812436 | None:intergenic | 35.0% | |
| ! | TTACTCTAAGAACAAGTGGA+AGG | + | chr5_4:18812444-18812463 | None:intergenic | 35.0% |
| TACCTTTGCAGACCAAATAA+AGG | - | chr5_4:18812520-18812539 | Msa0841970:intron | 35.0% | |
| TAAGAACTGCCTCCTTTATT+TGG | + | chr5_4:18812535-18812554 | None:intergenic | 35.0% | |
| ATAAAGGAGGCAGTTCTTAA+TGG | - | chr5_4:18812536-18812555 | Msa0841970:intron | 35.0% | |
| CACCCTAAATGGTGAAAAAA+TGG | + | chr5_4:18812677-18812696 | None:intergenic | 35.0% | |
| AGCAACATGAACTGGTAATA+TGG | - | chr5_4:18812846-18812865 | Msa0841970:intron | 35.0% | |
| GCCTGAAATTCCAATTTCAT+TGG | - | chr5_4:18812926-18812945 | Msa0841970:intron | 35.0% | |
| GCCAATGAAATTGGAATTTC+AGG | + | chr5_4:18812930-18812949 | None:intergenic | 35.0% | |
| ! | GTCACTACATTTGGTTTAAC+TGG | + | chr5_4:18812993-18813012 | None:intergenic | 35.0% |
| CTTCAGAAATTTGAGCACAT+TGG | + | chr5_4:18813045-18813064 | None:intergenic | 35.0% | |
| !! | CTCAAATTTCTGAAGCAAAG+TGG | - | chr5_4:18813050-18813069 | Msa0841970:intron | 35.0% |
| GTGTGTGTGTAATATTGTCA+TGG | - | chr5_4:18813123-18813142 | Msa0841970:intron | 35.0% | |
| ATTGTCATGGTTTCATCCAT+AGG | - | chr5_4:18813136-18813155 | Msa0841970:intron | 35.0% | |
| ACAGATAAGAAGGAGATTGA+AGG | - | chr5_4:18813230-18813249 | Msa0841970:intron | 35.0% | |
| CTTGATGGAAAAAAATGCAG+GGG | - | chr5_4:18813372-18813391 | Msa0841970:intron | 35.0% | |
| TGCATGACTGCAATATAACT+TGG | + | chr5_4:18813449-18813468 | None:intergenic | 35.0% | |
| ATGCTCGAGTTAAATATGCA+CGG | + | chr5_4:18813508-18813527 | None:intergenic | 35.0% | |
| !!! | TCGAGCAAATTTTAAAGCTG+AGG | - | chr5_4:18813558-18813577 | Msa0841970:intron | 35.0% |
| !!! | GCAAATTTTAAAGCTGAGGT+TGG | - | chr5_4:18813562-18813581 | Msa0841970:intron | 35.0% |
| ! | TTTAAAGCTGAGGTTGGAAA+AGG | - | chr5_4:18813568-18813587 | Msa0841970:intron | 35.0% |
| GTTATTGTAGTTGAGAAGCT+TGG | + | chr5_4:18813594-18813613 | None:intergenic | 35.0% | |
| CAACTACAATAACTATGCAG+AGG | - | chr5_4:18813601-18813620 | Msa0841970:intron | 35.0% | |
| TACTGATGGCATTATCTTTC+AGG | - | chr5_4:18813664-18813683 | Msa0841970:intron | 35.0% | |
| !! | CATTATCTTTCAGGTTAGCA+TGG | - | chr5_4:18813673-18813692 | Msa0841970:intron | 35.0% |
| TTTATCAACAGTTGCCATCT+TGG | + | chr5_4:18813702-18813721 | None:intergenic | 35.0% | |
| ATATCTGCAAGGAAGAAAGA+TGG | + | chr5_4:18814095-18814114 | None:intergenic | 35.0% | |
| ATCTTTCTTCCTTGCAGATA+TGG | - | chr5_4:18814094-18814113 | Msa0841970:intron | 35.0% | |
| AAGCTGATGATTTGACACAT+TGG | - | chr5_4:18814156-18814175 | Msa0841970:CDS | 35.0% | |
| AGCTGATGATTTGACACATT+GGG | - | chr5_4:18814157-18814176 | Msa0841970:CDS | 35.0% | |
| GGGATATCCATCTTAGTTAA+AGG | - | chr5_4:18814622-18814641 | Msa0841970:intron | 35.0% | |
| AGCTTTCCCTTTAACTAAGA+TGG | + | chr5_4:18814632-18814651 | None:intergenic | 35.0% | |
| AACCATATACTATAACTGGG+GGG | + | chr5_4:18814708-18814727 | None:intergenic | 35.0% | |
| GGTTAGTAAATTGGTCAATG+GGG | + | chr5_4:18814746-18814765 | None:intergenic | 35.0% | |
| !!! | CATCTGCTATTTTGTCTCAT+AGG | - | chr5_4:18814842-18814861 | Msa0841970:intron | 35.0% |
| AAGAGTCCATCCATAACATT+TGG | + | chr5_4:18814894-18814913 | None:intergenic | 35.0% | |
| ! | GACCTTGCAAAAACACTTTT+TGG | - | chr5_4:18814915-18814934 | Msa0841970:intron | 35.0% |
| !!! | TGCCAAAAAGTGTTTTTGCA+AGG | + | chr5_4:18814920-18814939 | None:intergenic | 35.0% |
| TCACGGAATGTCATTAAACT+TGG | + | chr5_4:18815285-18815304 | None:intergenic | 35.0% | |
| AAGTTTAATGACATTCCGTG+AGG | - | chr5_4:18815284-18815303 | Msa0841970:CDS | 35.0% | |
| ! | GTAAAATATGGGTTACCTCA+CGG | + | chr5_4:18815302-18815321 | None:intergenic | 35.0% |
| ATCATGTGAAGACCAGATAA+TGG | + | chr5_4:18815426-18815445 | None:intergenic | 35.0% | |
| AGAAAAAAAACGTTGGGAAG+TGG | + | chr5_4:18815523-18815542 | None:intergenic | 35.0% | |
| !!! | AGGTGCCGAACTTAAATTTT+TGG | - | chr5_4:18815555-18815574 | Msa0841970:intron | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | + | chr5_4:18815727-18815746 | None:intergenic | 35.0% |
| AGAAATGCTTAACCACCAAA+AGG | - | chr5_4:18816028-18816047 | Msa0841970:CDS | 35.0% | |
| !!! | CTTTGGTTGCTTTTTCCTTT+TGG | + | chr5_4:18816046-18816065 | None:intergenic | 35.0% |
| ! | TGTTCTTGATGGTTAAGCTT+TGG | + | chr5_4:18816063-18816082 | None:intergenic | 35.0% |
| AACTTTGCTTATGTCTTGAG+TGG | + | chr5_4:18816108-18816127 | None:intergenic | 35.0% | |
| ! | TTTGTCTTCTCCTTTTTCTC+AGG | - | chr5_4:18816670-18816689 | Msa0841970:intron | 35.0% |
| ACTTCAACACATGCTTACTA+GGG | - | chr5_4:18816724-18816743 | Msa0841970:intron | 35.0% | |
| ! | CAGTTTTCCATAAACTGAGA+AGG | + | chr5_4:18816806-18816825 | None:intergenic | 35.0% |
| CTTCTCAGTTTATGGAAAAC+TGG | - | chr5_4:18816804-18816823 | Msa0841970:intron | 35.0% | |
| TATCTTTGTCTTGAATGGAC+AGG | - | chr5_4:18816870-18816889 | Msa0841970:CDS | 35.0% | |
| ACAGGTCAGTATGAATGAAT+TGG | - | chr5_4:18817081-18817100 | Msa0841970:intron | 35.0% | |
| GTTCCTTCAAAACAGATTTC+TGG | - | chr5_4:18817200-18817219 | Msa0841970:intron | 35.0% | |
| TAAGCTTTCTGCATCAGTAT+TGG | - | chr5_4:18817272-18817291 | Msa0841970:intron | 35.0% | |
| !!! | TGCATCAGTATTGGTACTTT+TGG | - | chr5_4:18817281-18817300 | Msa0841970:intron | 35.0% |
| !!! | GCATCAGTATTGGTACTTTT+GGG | - | chr5_4:18817282-18817301 | Msa0841970:intron | 35.0% |
| TGATTCAAACCCATCTTTCT+TGG | - | chr5_4:18817493-18817512 | Msa0841970:intron | 35.0% | |
| GATTCAAACCCATCTTTCTT+GGG | - | chr5_4:18817494-18817513 | Msa0841970:intron | 35.0% | |
| TAACACAACCCAAGAAAGAT+GGG | + | chr5_4:18817505-18817524 | None:intergenic | 35.0% | |
| AAAATTTGCAACTGTCGATC+TGG | - | chr5_4:18817577-18817596 | Msa0841970:intron | 35.0% | |
| CATACAAAATATGTTCCTGG+GGG | - | chr5_4:18817605-18817624 | Msa0841970:intron | 35.0% | |
| ATATATGACTGAAGCTGCAA+AGG | + | chr5_4:18817709-18817728 | None:intergenic | 35.0% | |
| AGCTTCAGTCATATATTTGC+AGG | - | chr5_4:18817713-18817732 | Msa0841970:intron | 35.0% | |
| ! | AATCAACAAAGAGGTATAGG+AGG | + | chr5_4:18817748-18817767 | None:intergenic | 35.0% |
| ! | CGTAATCAACAAAGAGGTAT+AGG | + | chr5_4:18817751-18817770 | None:intergenic | 35.0% |
| !! | TGGATTTTGCATTTGTTAGG+TGG | - | chr5_4:18818061-18818080 | Msa0841970:CDS | 35.0% |
| TGTCATATAGTCCACAGAAA+AGG | - | chr5_4:18818173-18818192 | Msa0841970:intron | 35.0% | |
| GTCATATAGTCCACAGAAAA+GGG | - | chr5_4:18818174-18818193 | Msa0841970:intron | 35.0% | |
| TCATATAGTCCACAGAAAAG+GGG | - | chr5_4:18818175-18818194 | Msa0841970:intron | 35.0% | |
| TGAATTTGTGTGTTATGCAG+TGG | - | chr5_4:18818222-18818241 | Msa0841970:intron | 35.0% | |
| GAATTTGTGTGTTATGCAGT+GGG | - | chr5_4:18818223-18818242 | Msa0841970:intron | 35.0% | |
| ! | CATATGCATGTGACAGATTT+TGG | + | chr5_4:18818702-18818721 | None:intergenic | 35.0% |
| AAATCTGTCACATGCATATG+TGG | - | chr5_4:18818702-18818721 | Msa0841970:CDS | 35.0% | |
| AATCTGTCACATGCATATGT+GGG | - | chr5_4:18818703-18818722 | Msa0841970:CDS | 35.0% | |
| ! | ATGAGACACGAAGCACTTAT+TGG | - | chr5_4:18810419-18810438 | Msa0841970:three_prime_UTR | 40.0% |
| ! | CAAGAAGTGCGTTTAAGAAG+AGG | + | chr5_4:18810530-18810549 | None:intergenic | 40.0% |
| GAAAAGGAAGAAGACCAAAG+GGG | + | chr5_4:18810596-18810615 | None:intergenic | 40.0% | |
| GGAAAAGGAAGAAGACCAAA+GGG | + | chr5_4:18810597-18810616 | None:intergenic | 40.0% | |
| AGGAAAAGGAAGAAGACCAA+AGG | + | chr5_4:18810598-18810617 | None:intergenic | 40.0% | |
| GTGAAGTGAATCAATGCAGA+AGG | + | chr5_4:18810618-18810637 | None:intergenic | 40.0% | |
| GCTTCAACAACATCAAAAGG+AGG | + | chr5_4:18810737-18810756 | None:intergenic | 40.0% | |
| TCGTGCTCTTCTTGAGAAAT+TGG | - | chr5_4:18810778-18810797 | Msa0841970:intron | 40.0% | |
| CACTAACATAGACACACCAA+CGG | - | chr5_4:18811066-18811085 | Msa0841970:intron | 40.0% | |
| CATATTAGTGTCATGTCCGT+TGG | + | chr5_4:18811085-18811104 | None:intergenic | 40.0% | |
| ACGGACATGACACTAATATG+TGG | - | chr5_4:18811085-18811104 | Msa0841970:intron | 40.0% | |
| TGACACTAATATGTGGACAC+CGG | - | chr5_4:18811092-18811111 | Msa0841970:intron | 40.0% | |
| !! | TTGACTAATGGGGTGTTGAT+TGG | - | chr5_4:18811308-18811327 | Msa0841970:intron | 40.0% |
| ! | GTTGATTGGTTGTGTTCTGT+AGG | - | chr5_4:18811322-18811341 | Msa0841970:intron | 40.0% |
| TGTTCTGTAGGAACGTGATT+TGG | - | chr5_4:18811334-18811353 | Msa0841970:intron | 40.0% | |
| TCCAAAGGTTCTACCAACTT+AGG | + | chr5_4:18811392-18811411 | None:intergenic | 40.0% | |
| ! | AGAACCTTTGGAGAAGATTG+TGG | - | chr5_4:18811400-18811419 | Msa0841970:intron | 40.0% |
| CTATCCACAATCTTCTCCAA+AGG | + | chr5_4:18811407-18811426 | None:intergenic | 40.0% | |
| ! | CTTTGGAGAAGATTGTGGAT+AGG | - | chr5_4:18811405-18811424 | Msa0841970:intron | 40.0% |
| AAGTACCTGCACATCTTCAA+TGG | + | chr5_4:18811498-18811517 | None:intergenic | 40.0% | |
| ! | TGAAGATGTGCAGGTACTTT+TGG | - | chr5_4:18811499-18811518 | Msa0841970:intron | 40.0% |
| ! | TATGATGACTGGTTGTGCTT+TGG | - | chr5_4:18811608-18811627 | Msa0841970:intron | 40.0% |
| ! | ATGATGACTGGTTGTGCTTT+GGG | - | chr5_4:18811609-18811628 | Msa0841970:intron | 40.0% |
| GCGGAAATTTAACAAACGAG+TGG | + | chr5_4:18812306-18812325 | None:intergenic | 40.0% | |
| GAAAGAACAGGCTGTTATTG+GGG | + | chr5_4:18812416-18812435 | None:intergenic | 40.0% | |
| GTGAAAGAACAGGCTGTTAT+TGG | + | chr5_4:18812418-18812437 | None:intergenic | 40.0% | |
| TGGAAGGTAAGTGAAAGAAC+AGG | + | chr5_4:18812428-18812447 | None:intergenic | 40.0% | |
| ! | CTCCTTTATTTGGTCTGCAA+AGG | + | chr5_4:18812525-18812544 | None:intergenic | 40.0% |
| CTTTGCAGACCAAATAAAGG+AGG | - | chr5_4:18812523-18812542 | Msa0841970:intron | 40.0% | |
| GGTGATTATGTACTAGGCTT+TGG | - | chr5_4:18812693-18812712 | Msa0841970:CDS | 40.0% | |
| ACTGAGCATATCATGTTCTC+AGG | - | chr5_4:18812744-18812763 | Msa0841970:CDS | 40.0% | |
| CATATCATGTTCTCAGGCTA+GGG | - | chr5_4:18812750-18812769 | Msa0841970:intron | 40.0% | |
| ATAGGACAAGCAACATGAAC+TGG | - | chr5_4:18812838-18812857 | Msa0841970:intron | 40.0% | |
| AAAATTTGGGGAGAACGTTC+TGG | - | chr5_4:18813178-18813197 | Msa0841970:intron | 40.0% | |
| GCATCCAATGTAATTACCCA+TGG | + | chr5_4:18813425-18813444 | None:intergenic | 40.0% | |
| !! | TATTTAACTCGAGCATCGAG+TGG | - | chr5_4:18813512-18813531 | Msa0841970:intron | 40.0% |
| ATTGCCTCATTAGAGGAAGA+TGG | + | chr5_4:18814060-18814079 | None:intergenic | 40.0% | |
| CCAAGTTATTGCCTCATTAG+AGG | + | chr5_4:18814067-18814086 | None:intergenic | 40.0% | |
| CCTCTAATGAGGCAATAACT+TGG | - | chr5_4:18814064-18814083 | Msa0841970:intron | 40.0% | |
| TAAGGTCTTCCATATCTGCA+AGG | + | chr5_4:18814106-18814125 | None:intergenic | 40.0% | |
| !!! | CACATTGGGACATTAGCTTT+TGG | - | chr5_4:18814171-18814190 | Msa0841970:CDS | 40.0% |
| !!! | ACATTAGCTTTTGGAGTGAG+AGG | - | chr5_4:18814180-18814199 | Msa0841970:CDS | 40.0% |
| GGAGAAAAAGGAACGTTTAG+TGG | + | chr5_4:18814585-18814604 | None:intergenic | 40.0% | |
| TTCCCCCCAGTTATAGTATA+TGG | - | chr5_4:18814703-18814722 | Msa0841970:intron | 40.0% | |
| AAATTGGTCAATGGGGCAAA+CGG | + | chr5_4:18814739-18814758 | None:intergenic | 40.0% | |
| TCTCTGCCAAATGTTATGGA+TGG | - | chr5_4:18814885-18814904 | Msa0841970:intron | 40.0% | |
| ATTGAAATTGAGCCAGCTGA+CGG | - | chr5_4:18814939-18814958 | Msa0841970:intron | 40.0% | |
| ! | GACTCCCTTTTATTCATCTG+TGG | - | chr5_4:18814979-18814998 | Msa0841970:intron | 40.0% |
| TTTCGTGTCAAAGATTCCTC+AGG | - | chr5_4:18815084-18815103 | Msa0841970:intron | 40.0% | |
| AACCTTGATGAGTTACCATC+AGG | + | chr5_4:18815213-18815232 | None:intergenic | 40.0% | |
| TGTTTGATTGCACACCATGT+GGG | + | chr5_4:18815244-18815263 | None:intergenic | 40.0% | |
| AGTTGTCTGGGCTATATCAA+TGG | - | chr5_4:18815382-18815401 | Msa0841970:intron | 40.0% | |
| GTTGTCTGGGCTATATCAAT+GGG | - | chr5_4:18815383-18815402 | Msa0841970:intron | 40.0% | |
| GTAAATACAGCAAGACTGAG+AGG | + | chr5_4:18815598-18815617 | None:intergenic | 40.0% | |
| ! | CTCAGTCTTGCTGTATTTAC+AGG | - | chr5_4:18815598-18815617 | Msa0841970:intron | 40.0% |
| !!! | CGACATTCATTTTGAAACGG+AGG | + | chr5_4:18815728-18815747 | None:intergenic | 40.0% |
| !!! | TGGTTGCTTTTTCCTTTTGG+TGG | + | chr5_4:18816043-18816062 | None:intergenic | 40.0% |
| AAGCTTAACCATCAAGCACA+AGG | - | chr5_4:18816132-18816151 | Msa0841970:intron | 40.0% | |
| AAGATATGCCTTGTGCTTGA+TGG | + | chr5_4:18816143-18816162 | None:intergenic | 40.0% | |
| CAAGCACAAGGCATATCTTA+AGG | - | chr5_4:18816144-18816163 | Msa0841970:intron | 40.0% | |
| CATGCTTAATCACCTGATGA+TGG | - | chr5_4:18816190-18816209 | Msa0841970:CDS | 40.0% | |
| GGAAACCTTCATCCTAACTT+GGG | - | chr5_4:18816310-18816329 | Msa0841970:intron | 40.0% | |
| AGTTTCCCAAGTTAGGATGA+AGG | + | chr5_4:18816318-18816337 | None:intergenic | 40.0% | |
| AAACAGGAGTTTCCCAAGTT+AGG | + | chr5_4:18816325-18816344 | None:intergenic | 40.0% | |
| ACAGTCTCAACCTGAGAAAA+AGG | + | chr5_4:18816683-18816702 | None:intergenic | 40.0% | |
| GAGACTGTCTTCCATGAATT+TGG | - | chr5_4:18816695-18816714 | Msa0841970:intron | 40.0% | |
| CACTTCAACACATGCTTACT+AGG | - | chr5_4:18816723-18816742 | Msa0841970:intron | 40.0% | |
| ATGCTTACTAGGGAAGATGA+GGG | - | chr5_4:18816734-18816753 | Msa0841970:intron | 40.0% | |
| TGGTATTAGGGGAATAGAGT+GGG | - | chr5_4:18816766-18816785 | Msa0841970:intron | 40.0% | |
| GCTTCTGATATACGTCTTCT+GGG | + | chr5_4:18817018-18817037 | None:intergenic | 40.0% | |
| AGCTTCTGATATACGTCTTC+TGG | + | chr5_4:18817019-18817038 | None:intergenic | 40.0% | |
| GTAACACAACCCAAGAAAGA+TGG | + | chr5_4:18817506-18817525 | None:intergenic | 40.0% | |
| TCTGCGATCAACATCATAGA+TGG | + | chr5_4:18817639-18817658 | None:intergenic | 40.0% | |
| AGCTGGATACTATAGCTACA+AGG | - | chr5_4:18818090-18818109 | Msa0841970:CDS | 40.0% | |
| CATATAGTCCACAGAAAAGG+GGG | - | chr5_4:18818176-18818195 | Msa0841970:intron | 40.0% | |
| AGATGCTTTCTCTGCATTTG+AGG | - | chr5_4:18818262-18818281 | Msa0841970:intron | 40.0% | |
| TGCAGGATTGGATGATAACA+AGG | - | chr5_4:18818286-18818305 | Msa0841970:intron | 40.0% | |
| TACACAGGCTGTTGTAGAAA+CGG | - | chr5_4:18818528-18818547 | Msa0841970:intron | 40.0% | |
| ATCTCAATTCTCACCTCAAG+TGG | + | chr5_4:18818601-18818620 | None:intergenic | 40.0% | |
| ATCTGTCACATGCATATGTG+GGG | - | chr5_4:18818704-18818723 | Msa0841970:CDS | 40.0% | |
| ! | TTTTTACCAACTTTGGCGTG+TGG | - | chr5_4:18818737-18818756 | Msa0841970:CDS | 40.0% |
| CTCTATCCTAAGCTGCAATT+AGG | + | chr5_4:18818860-18818879 | None:intergenic | 40.0% | |
| CTAATTGCAGCTTAGGATAG+AGG | - | chr5_4:18818858-18818877 | Msa0841970:CDS | 40.0% | |
| AGAGTGAGAATGTGAGTGTG+AGG | + | chr5_4:18810481-18810500 | None:intergenic | 45.0% | |
| GAAGCCGAACAAGTAAACGA+AGG | + | chr5_4:18810653-18810672 | None:intergenic | 45.0% | |
| TACTTGTTCGGCTTCTTCCA+TGG | - | chr5_4:18810658-18810677 | Msa0841970:intron | 45.0% | |
| ! | TCAAGAAGAGCACGAATTCC+CGG | + | chr5_4:18810773-18810792 | None:intergenic | 45.0% |
| TGCATGTTAGTGGCATGTGT+CGG | - | chr5_4:18811162-18811181 | Msa0841970:CDS | 45.0% | |
| ! | TCTGTAGGAACGTGATTTGG+AGG | - | chr5_4:18811337-18811356 | Msa0841970:intron | 45.0% |
| ! | GTGATTTGGAGGAGCTTGAA+CGG | - | chr5_4:18811348-18811367 | Msa0841970:CDS | 45.0% |
| !! | GCCTAAGTTGGTAGAACCTT+TGG | - | chr5_4:18811388-18811407 | Msa0841970:intron | 45.0% |
| GGAGAAGATTGTGGATAGGT+TGG | - | chr5_4:18811409-18811428 | Msa0841970:intron | 45.0% | |
| ! | TGGATAGGTTGGCTGTTGTT+TGG | - | chr5_4:18811420-18811439 | Msa0841970:intron | 45.0% |
| ! | GGATAGGTTGGCTGTTGTTT+GGG | - | chr5_4:18811421-18811440 | Msa0841970:intron | 45.0% |
| ! | GATAGGTTGGCTGTTGTTTG+GGG | - | chr5_4:18811422-18811441 | Msa0841970:intron | 45.0% |
| ! | ATAGGTTGGCTGTTGTTTGG+GGG | - | chr5_4:18811423-18811442 | Msa0841970:intron | 45.0% |
| GCACATCTTCAATGGCTGAA+CGG | + | chr5_4:18811490-18811509 | None:intergenic | 45.0% | |
| TTCAGCCATTGAAGATGTGC+AGG | - | chr5_4:18811490-18811509 | Msa0841970:intron | 45.0% | |
| !! | TGGTTGTGCTTTGGGATGTA+GGG | - | chr5_4:18811617-18811636 | Msa0841970:intron | 45.0% |
| CGATTCAAGACTCTCCTGAT+TGG | - | chr5_4:18812028-18812047 | Msa0841970:intron | 45.0% | |
| TCGCTAAGTGTCTTCCAATC+AGG | + | chr5_4:18812045-18812064 | None:intergenic | 45.0% | |
| TAGAAGCTGAGAACCAGCTA+CGG | + | chr5_4:18812206-18812225 | None:intergenic | 45.0% | |
| CGACATTTCCGACAATGAAG+CGG | + | chr5_4:18812325-18812344 | None:intergenic | 45.0% | |
| GCATATCATGTTCTCAGGCT+AGG | - | chr5_4:18812749-18812768 | Msa0841970:intron | 45.0% | |
| GTGATGCATGTGGTTCCTTT+GGG | + | chr5_4:18812905-18812924 | None:intergenic | 45.0% | |
| TGTGATGCATGTGGTTCCTT+TGG | + | chr5_4:18812906-18812925 | None:intergenic | 45.0% | |
| ATTTCAGGCTGTGATGCATG+TGG | + | chr5_4:18812915-18812934 | None:intergenic | 45.0% | |
| ATTGGCAGTATATGTCAGCG+AGG | - | chr5_4:18812944-18812963 | Msa0841970:intron | 45.0% | |
| ATGGTTTCATCCATAGGAGC+TGG | - | chr5_4:18813142-18813161 | Msa0841970:intron | 45.0% | |
| TTCATCCATAGGAGCTGGAA+AGG | - | chr5_4:18813147-18813166 | Msa0841970:intron | 45.0% | |
| GATAACCTTTCCAGCTCCTA+TGG | + | chr5_4:18813155-18813174 | None:intergenic | 45.0% | |
| GATTACCTGCTACTGCTCTT+GGG | - | chr5_4:18813252-18813271 | Msa0841970:intron | 45.0% | |
| TGCACAAAGCGCAGTATCTA+AGG | - | chr5_4:18813280-18813299 | Msa0841970:intron | 45.0% | |
| AAAATGCCACCGCTGAGAAT+GGG | - | chr5_4:18813399-18813418 | Msa0841970:intron | 45.0% | |
| TGGGCCATGGGTAATTACAT+TGG | - | chr5_4:18813418-18813437 | Msa0841970:intron | 45.0% | |
| AGAAGCTTCGTAAAGCTTCC+TGG | - | chr5_4:18813738-18813757 | Msa0841970:intron | 45.0% | |
| GAAGCTTCGTAAAGCTTCCT+GGG | - | chr5_4:18813739-18813758 | Msa0841970:intron | 45.0% | |
| ACGTCCATCTTCCTCTAATG+AGG | - | chr5_4:18814053-18814072 | Msa0841970:intron | 45.0% | |
| ! | TTCTAAAGACCAGGGTGCAT+TGG | - | chr5_4:18814133-18814152 | Msa0841970:intron | 45.0% |
| TTCAAGTGAGTGAGTGTGAG+AGG | + | chr5_4:18814239-18814258 | None:intergenic | 45.0% | |
| AATTGGTCAATGGGGCAAAC+GGG | + | chr5_4:18814738-18814757 | None:intergenic | 45.0% | |
| GCAGATGTATGAGCTTTCCA+AGG | + | chr5_4:18814829-18814848 | None:intergenic | 45.0% | |
| TTCATCTGTGGTTCTTGCGT+TGG | - | chr5_4:18814991-18815010 | Msa0841970:intron | 45.0% | |
| TCATCTGTGGTTCTTGCGTT+GGG | - | chr5_4:18814992-18815011 | Msa0841970:intron | 45.0% | |
| ! | TTTTCGGAAGGACGACTGTA+GGG | + | chr5_4:18815138-18815157 | None:intergenic | 45.0% |
| !! | TTTTTCGGAAGGACGACTGT+AGG | + | chr5_4:18815139-18815158 | None:intergenic | 45.0% |
| ACAGTCGTCCTTCCGAAAAA+AGG | - | chr5_4:18815139-18815158 | Msa0841970:intron | 45.0% | |
| TAACTCATCAAGGTTGCCTG+TGG | - | chr5_4:18815218-18815237 | Msa0841970:intron | 45.0% | |
| GTGTTTGATTGCACACCATG+TGG | + | chr5_4:18815245-18815264 | None:intergenic | 45.0% | |
| TGCAATCAAACACCTCCAGT+AGG | - | chr5_4:18815252-18815271 | Msa0841970:CDS | 45.0% | |
| !! | AAACTTGGCTTGCTTCCTAC+TGG | + | chr5_4:18815270-18815289 | None:intergenic | 45.0% |
| GGGAAACCTTCATCCTAACT+TGG | - | chr5_4:18816309-18816328 | Msa0841970:intron | 45.0% | |
| GAAGTGCGTGTCCAAATTCA+TGG | + | chr5_4:18816709-18816728 | None:intergenic | 45.0% | |
| CATGCTTACTAGGGAAGATG+AGG | - | chr5_4:18816733-18816752 | Msa0841970:intron | 45.0% | |
| AGGGTCTAGTTGCTGGTATT+AGG | - | chr5_4:18816753-18816772 | Msa0841970:intron | 45.0% | |
| GGGTCTAGTTGCTGGTATTA+GGG | - | chr5_4:18816754-18816773 | Msa0841970:intron | 45.0% | |
| GGTCTAGTTGCTGGTATTAG+GGG | - | chr5_4:18816755-18816774 | Msa0841970:intron | 45.0% | |
| CTGGTATTAGGGGAATAGAG+TGG | - | chr5_4:18816765-18816784 | Msa0841970:intron | 45.0% | |
| ! | ACAAAGAGGTATAGGAGGCA+CGG | + | chr5_4:18817743-18817762 | None:intergenic | 45.0% |
| AGACGGCGTAATCAACAAAG+AGG | + | chr5_4:18817757-18817776 | None:intergenic | 45.0% | |
| GCCATGTACAATGGAACAGA+CGG | + | chr5_4:18817774-18817793 | None:intergenic | 45.0% | |
| TTGTTAGGTGGATATGCAGC+TGG | - | chr5_4:18818073-18818092 | Msa0841970:CDS | 45.0% | |
| ! | AGTCATTTCCCCCTTTTCTG+TGG | + | chr5_4:18818187-18818206 | None:intergenic | 45.0% |
| TTCTCTGCATTTGAGGATGC+AGG | - | chr5_4:18818269-18818288 | Msa0841970:intron | 45.0% | |
| TGCATTTGAGGATGCAGGAT+TGG | - | chr5_4:18818274-18818293 | Msa0841970:intron | 45.0% | |
| ACACAGGCTGTTGTAGAAAC+GGG | - | chr5_4:18818529-18818548 | Msa0841970:intron | 45.0% | |
| TAGAAACGGGACACAAGTTC+AGG | - | chr5_4:18818542-18818561 | Msa0841970:intron | 45.0% | |
| AGAAACGGGACACAAGTTCA+GGG | - | chr5_4:18818543-18818562 | Msa0841970:intron | 45.0% | |
| TCAATTCTCACCTCAAGTGG+TGG | + | chr5_4:18818598-18818617 | None:intergenic | 45.0% | |
| CATGCATATGTGGGGTAACT+AGG | - | chr5_4:18818712-18818731 | Msa0841970:CDS | 45.0% | |
| TAGGTGTTTGTGCAATTCCG+TGG | - | chr5_4:18818795-18818814 | Msa0841970:CDS | 45.0% | |
| AGGTGTTTGTGCAATTCCGT+GGG | - | chr5_4:18818796-18818815 | Msa0841970:CDS | 45.0% | |
| TTGTGTCTGAGCAATGCATC+TGG | + | chr5_4:18818834-18818853 | None:intergenic | 45.0% | |
| GATGCATTGCTCAGACACAA+TGG | - | chr5_4:18818834-18818853 | Msa0841970:CDS | 45.0% | |
| CAATGGCCTAATTGCAGCTT+AGG | - | chr5_4:18818851-18818870 | Msa0841970:CDS | 45.0% | |
| !! | TAAAAATAATTATATATCAA+GGG | + | chr5_4:18814480-18814499 | None:intergenic | 5.0% |
| !! | TTAAAAATAATTATATATCA+AGG | + | chr5_4:18814481-18814500 | None:intergenic | 5.0% |
| !! | AAAATTATTATTAATTAAAG+TGG | + | chr5_4:18815500-18815519 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAAAAAAAAT+AGG | - | chr5_4:18815535-18815554 | Msa0841970:intron | 5.0% |
| AATCCCTTCCTTGTCCCCTT+TGG | - | chr5_4:18810579-18810598 | Msa0841970:exon | 50.0% | |
| AGACCAAAGGGGACAAGGAA+GGG | + | chr5_4:18810585-18810604 | None:intergenic | 50.0% | |
| AAGACCAAAGGGGACAAGGA+AGG | + | chr5_4:18810586-18810605 | None:intergenic | 50.0% | |
| GAAGAAGACCAAAGGGGACA+AGG | + | chr5_4:18810590-18810609 | None:intergenic | 50.0% | |
| ATCAAGAGCAGAAGCAGCCA+TGG | + | chr5_4:18810678-18810697 | None:intergenic | 50.0% | |
| ! | CATGTGTCGGTGCATGTTAG+TGG | - | chr5_4:18811152-18811171 | Msa0841970:CDS | 50.0% |
| !! | CAAAAGTGTCGGTGCTACAG+AGG | - | chr5_4:18811205-18811224 | Msa0841970:intron | 50.0% |
| TCTACCAACTTAGGCCACGA+AGG | + | chr5_4:18811383-18811402 | None:intergenic | 50.0% | |
| CTCGGTCTTGCTTCTGTTGA+TGG | - | chr5_4:18811562-18811581 | Msa0841970:intron | 50.0% | |
| !! | CTGGTTGTGCTTTGGGATGT+AGG | - | chr5_4:18811616-18811635 | Msa0841970:intron | 50.0% |
| TTCACCTTGCATTCCGTAGC+TGG | - | chr5_4:18812190-18812209 | Msa0841970:intron | 50.0% | |
| AGAACCAGCTACGGAATGCA+AGG | + | chr5_4:18812197-18812216 | None:intergenic | 50.0% | |
| GGATTACCTGCTACTGCTCT+TGG | - | chr5_4:18813251-18813270 | Msa0841970:intron | 50.0% | |
| GAAAATGCCACCGCTGAGAA+TGG | - | chr5_4:18813398-18813417 | Msa0841970:intron | 50.0% | |
| AGACTTCCTCACGCAGAGAA+CGG | + | chr5_4:18813484-18813503 | None:intergenic | 50.0% | |
| !! | TCGAGCATCGAGTGGTGATT+TGG | - | chr5_4:18813520-18813539 | Msa0841970:intron | 50.0% |
| GGTTAGCATGGCAACCAAGA+TGG | - | chr5_4:18813685-18813704 | Msa0841970:intron | 50.0% | |
| GGGGGGAATGAACTTTCATG+TGG | + | chr5_4:18814691-18814710 | None:intergenic | 50.0% | |
| CATCTGTGGTTCTTGCGTTG+GGG | - | chr5_4:18814993-18815012 | Msa0841970:intron | 50.0% | |
| CGTCCTTCCGAAAAAAGGCA+AGG | - | chr5_4:18815144-18815163 | Msa0841970:intron | 50.0% | |
| !!! | GCACCTTGCCTTTTTTCGGA+AGG | + | chr5_4:18815150-18815169 | None:intergenic | 50.0% |
| !!! | CCACGCACCTTGCCTTTTTT+CGG | + | chr5_4:18815154-18815173 | None:intergenic | 50.0% |
| AAAAAGGCAAGGTGCGTGGA+TGG | - | chr5_4:18815155-18815174 | Msa0841970:intron | 50.0% | |
| CGCCTGATGGTAACTCATCA+AGG | - | chr5_4:18815208-18815227 | Msa0841970:intron | 50.0% | |
| GAAGATGAGGGTCTAGTTGC+TGG | - | chr5_4:18816746-18816765 | Msa0841970:intron | 50.0% | |
| AGTGCCAGCACGATAAGTTC+TGG | + | chr5_4:18817050-18817069 | None:intergenic | 50.0% | |
| TGGCACTCAAAGTCTTCGAC+AGG | - | chr5_4:18817063-18817082 | Msa0841970:intron | 50.0% | |
| ! | TAGATGGATTCTTGTCCCCC+AGG | + | chr5_4:18817623-18817642 | None:intergenic | 50.0% |
| AGTGATTCCTCCATTGCCAG+AGG | - | chr5_4:18817676-18817695 | Msa0841970:intron | 50.0% | |
| AATCTGTCCTCTGGCAATGG+AGG | + | chr5_4:18817686-18817705 | None:intergenic | 50.0% | |
| AGGAATCTGTCCTCTGGCAA+TGG | + | chr5_4:18817689-18817708 | None:intergenic | 50.0% | |
| CTGCAAAGGAATCTGTCCTC+TGG | + | chr5_4:18817695-18817714 | None:intergenic | 50.0% | |
| GCCGTCTGTTCCATTGTACA+TGG | - | chr5_4:18817770-18817789 | Msa0841970:intron | 50.0% | |
| AGGGAGACCATTCTTGCTCT+TGG | - | chr5_4:18818562-18818581 | Msa0841970:intron | 50.0% | |
| GAGACCATTCTTGCTCTTGG+AGG | - | chr5_4:18818565-18818584 | Msa0841970:intron | 50.0% | |
| ACCATTCTTGCTCTTGGAGG+TGG | - | chr5_4:18818568-18818587 | Msa0841970:intron | 50.0% | |
| CAAGATCCACACGCCAAAGT+TGG | + | chr5_4:18818746-18818765 | None:intergenic | 50.0% | |
| CTGAGCAATGCATCTGGTGT+TGG | + | chr5_4:18818828-18818847 | None:intergenic | 50.0% | |
| TGAAGCGAAGCACGTGAGAC+CGG | - | chr5_4:18810751-18810770 | Msa0841970:intron | 55.0% | |
| TAGTGGCATGTGTCGGACAC+CGG | - | chr5_4:18811169-18811188 | Msa0841970:CDS | 55.0% | |
| AACGGAGTGTGGAACCTTCG+TGG | - | chr5_4:18811366-18811385 | Msa0841970:intron | 55.0% | |
| GGAACCTTCGTGGCCTAAGT+TGG | - | chr5_4:18811376-18811395 | Msa0841970:intron | 55.0% | |
| ! | GTTGGCTGTTGTTTGGGGGA+TGG | - | chr5_4:18811427-18811446 | Msa0841970:intron | 55.0% |
| ACCTGCTACTGCTCTTGGGT+TGG | - | chr5_4:18813256-18813275 | Msa0841970:intron | 55.0% | |
| TACCCATGGCCCATTCTCAG+CGG | + | chr5_4:18813411-18813430 | None:intergenic | 55.0% | |
| TCCTGGGATGCTGCAGTACA+AGG | - | chr5_4:18813755-18813774 | Msa0841970:intron | 55.0% | |
| ACCTTGTACTGCAGCATCCC+AGG | + | chr5_4:18813759-18813778 | None:intergenic | 55.0% | |
| CATCAGCTTCCAATGCACCC+TGG | + | chr5_4:18814145-18814164 | None:intergenic | 55.0% | |
| ATAGGCAACTGGACTGCCTG+AGG | + | chr5_4:18815103-18815122 | None:intergenic | 55.0% | |
| CCGAAAAAAGGCAAGGTGCG+TGG | - | chr5_4:18815151-18815170 | Msa0841970:intron | 55.0% | |
| AGTCGTGTACTGTCGCCTGA+TGG | - | chr5_4:18815195-18815214 | Msa0841970:intron | 55.0% | |
| !! | CTTGGCTTGCTTCCTACTGG+AGG | + | chr5_4:18815267-18815286 | None:intergenic | 55.0% |
| ! | GCCAGCACGATAAGTTCTGG+CGG | + | chr5_4:18817047-18817066 | None:intergenic | 55.0% |
| GCCACCTCCAAGAGCAAGAA+TGG | + | chr5_4:18818572-18818591 | None:intergenic | 55.0% | |
| !! | CTGGTGTTGGTTCTCTCCCA+CGG | + | chr5_4:18818815-18818834 | None:intergenic | 55.0% |
| GAAGCGAAGCACGTGAGACC+GGG | - | chr5_4:18810752-18810771 | Msa0841970:intron | 60.0% | |
| GGAGGAGCTTGAACGGAGTG+TGG | - | chr5_4:18811355-18811374 | Msa0841970:CDS | 60.0% | |
| GCCAACCCAAGAGCAGTAGC+AGG | + | chr5_4:18813260-18813279 | None:intergenic | 60.0% | |
| CACCGCTGAGAATGGGCCAT+GGG | - | chr5_4:18813406-18813425 | Msa0841970:intron | 60.0% | |
| TCGCAACCGTTCTCTGCGTG+AGG | - | chr5_4:18813475-18813494 | Msa0841970:intron | 60.0% | |
| AAGGTTGCCTGTGGCCCACA+TGG | - | chr5_4:18815227-18815246 | Msa0841970:CDS | 60.0% | |
| TTGCACACCATGTGGGCCAC+AGG | + | chr5_4:18815237-18815256 | None:intergenic | 60.0% | |
| GCCGCCAGAACTTATCGTGC+TGG | - | chr5_4:18817043-18817062 | Msa0841970:intron | 60.0% | |
| AGGTGGCAAGCCACCACTTG+AGG | - | chr5_4:18818585-18818604 | Msa0841970:intron | 60.0% | |
| CCATGGCCCATTCTCAGCGG+TGG | + | chr5_4:18813408-18813427 | None:intergenic | 65.0% | |
| CCACCGCTGAGAATGGGCCA+TGG | - | chr5_4:18813405-18813424 | Msa0841970:intron | 65.0% | |
| ! | GCCAGCTGACGGTCTAGCTC+CGG | - | chr5_4:18814950-18814969 | Msa0841970:intron | 65.0% |
| ACCGGAGCTAGACCGTCAGC+TGG | + | chr5_4:18814954-18814973 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 18810413 | 18819044 | 18810413 | ID=Msa0841970;Name=Msa0841970 |
| chr5_4 | mRNA | 18810413 | 18819044 | 18810413 | ID=Msa0841970-mRNA-1;Parent=Msa0841970;Name=Msa0841970-mRNA-1;_AED=0.07;_eAED=0.07;_QI=6|1|1|1|1|1|17|172|786 |
| chr5_4 | exon | 18810413 | 18810659 | 18810413 | ID=Msa0841970-mRNA-1:exon:7864;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18810851 | 18810922 | 18810851 | ID=Msa0841970-mRNA-1:exon:7863;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18811150 | 18811215 | 18811150 | ID=Msa0841970-mRNA-1:exon:7862;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18811346 | 18811377 | 18811346 | ID=Msa0841970-mRNA-1:exon:7861;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18811723 | 18811882 | 18811723 | ID=Msa0841970-mRNA-1:exon:7860;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18812373 | 18812490 | 18812373 | ID=Msa0841970-mRNA-1:exon:7859;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18812620 | 18812765 | 18812620 | ID=Msa0841970-mRNA-1:exon:7858;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18814152 | 18814397 | 18814152 | ID=Msa0841970-mRNA-1:exon:7857;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18814486 | 18814593 | 18814486 | ID=Msa0841970-mRNA-1:exon:7856;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18815225 | 18815346 | 18815225 | ID=Msa0841970-mRNA-1:exon:7855;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18815681 | 18815771 | 18815681 | ID=Msa0841970-mRNA-1:exon:7854;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18815835 | 18816065 | 18815835 | ID=Msa0841970-mRNA-1:exon:7853;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18816156 | 18816299 | 18816156 | ID=Msa0841970-mRNA-1:exon:7852;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18816850 | 18816926 | 18816850 | ID=Msa0841970-mRNA-1:exon:7851;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18817370 | 18817493 | 18817370 | ID=Msa0841970-mRNA-1:exon:7850;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18817946 | 18818113 | 18817946 | ID=Msa0841970-mRNA-1:exon:7849;Parent=Msa0841970-mRNA-1 |
| chr5_4 | exon | 18818658 | 18819044 | 18818658 | ID=Msa0841970-mRNA-1:exon:7848;Parent=Msa0841970-mRNA-1 |
| chr5_4 | five_prime_UTR | 18819039 | 18819044 | 18819039 | ID=Msa0841970-mRNA-1:five_prime_utr;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18818658 | 18819038 | 18818658 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18817946 | 18818113 | 18817946 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18817370 | 18817493 | 18817370 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18816850 | 18816926 | 18816850 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18816156 | 18816299 | 18816156 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18815835 | 18816065 | 18815835 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18815681 | 18815771 | 18815681 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18815225 | 18815346 | 18815225 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18814486 | 18814593 | 18814486 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18814152 | 18814397 | 18814152 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18812620 | 18812765 | 18812620 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18812373 | 18812490 | 18812373 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18811723 | 18811882 | 18811723 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18811346 | 18811377 | 18811346 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18811150 | 18811215 | 18811150 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18810851 | 18810922 | 18810851 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | CDS | 18810585 | 18810659 | 18810585 | ID=Msa0841970-mRNA-1:cds;Parent=Msa0841970-mRNA-1 |
| chr5_4 | three_prime_UTR | 18810413 | 18810584 | 18810413 | ID=Msa0841970-mRNA-1:three_prime_utr;Parent=Msa0841970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
