Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0829050 | XP_003603333.2 | 98.330 | 479 | 4 | 2 | 9 | 487 | 1 | 475 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0829050 | sp|D2XNR1|FLOT4_MEDTR | 98.330 | 479 | 4 | 2 | 9 | 487 | 1 | 475 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0829050 | G7JAE5 | 98.330 | 479 | 4 | 2 | 9 | 487 | 1 | 475 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005260 | Msa0829050 | 0.834123 | 3.594674e-56 | -8.615850e-47 |
| Msa0022470 | Msa0829050 | 0.834085 | 3.674645e-56 | -8.615850e-47 |
| Msa0059900 | Msa0829050 | 0.819971 | 8.775820e-53 | -8.615850e-47 |
| Msa0071470 | Msa0829050 | 0.832215 | 1.073580e-55 | -8.615850e-47 |
| Msa0086360 | Msa0829050 | 0.832502 | 9.111750e-56 | -8.615850e-47 |
| Msa0090380 | Msa0829050 | 0.821104 | 4.820399e-53 | -8.615850e-47 |
| Msa0092970 | Msa0829050 | 0.977173 | 2.959709e-143 | -8.615850e-47 |
| Msa0104810 | Msa0829050 | 0.847593 | 1.048511e-59 | -8.615850e-47 |
| Msa0118010 | Msa0829050 | 0.825920 | 3.603413e-54 | -8.615850e-47 |
| Msa0119430 | Msa0829050 | 0.806239 | 9.058704e-50 | -8.615850e-47 |
| Msa0662580 | Msa0829050 | 0.848919 | 4.509629e-60 | -8.615850e-47 |
| Msa0713060 | Msa0829050 | 0.805975 | 1.029857e-49 | -8.615850e-47 |
| Msa0717860 | Msa0829050 | 0.804085 | 2.558930e-49 | -8.615850e-47 |
| Msa0753930 | Msa0829050 | 0.809679 | 1.679835e-50 | -8.615850e-47 |
| Msa0758520 | Msa0829050 | 0.817095 | 3.939780e-52 | -8.615850e-47 |
| Msa0758570 | Msa0829050 | 0.816243 | 6.114704e-52 | -8.615850e-47 |
| Msa0804870 | Msa0829050 | 0.856024 | 4.254135e-62 | -8.615850e-47 |
| Msa0807020 | Msa0829050 | 0.831909 | 1.277714e-55 | -8.615850e-47 |
| Msa0829050 | Msa0832950 | 0.855553 | 5.841001e-62 | -8.615850e-47 |
| Msa0829050 | Msa0838870 | 0.822272 | 2.589200e-53 | -8.615850e-47 |
| Msa0829050 | Msa0848020 | 0.821435 | 4.043428e-53 | -8.615850e-47 |
| Msa0829050 | Msa0859040 | 0.807568 | 4.743175e-50 | -8.615850e-47 |
| Msa0829050 | Msa0881510 | 0.803633 | 3.176472e-49 | -8.615850e-47 |
| Msa0829050 | Msa0945130 | 0.809808 | 1.575800e-50 | -8.615850e-47 |
| Msa0829050 | Msa0965780 | 0.803295 | 3.731860e-49 | -8.615850e-47 |
| Msa0829050 | Msa1000800 | 0.820271 | 7.490951e-53 | -8.615850e-47 |
| Msa0829050 | Msa1026890 | 0.800459 | 1.426810e-48 | -8.615850e-47 |
| Msa0829050 | Msa1027910 | 0.835559 | 1.564145e-56 | -8.615850e-47 |
| Msa0829050 | Msa1030200 | 0.820468 | 6.752645e-53 | -8.615850e-47 |
| Msa0829050 | Msa1084890 | 0.823669 | 1.222871e-53 | -8.615850e-47 |
| Msa0829050 | Msa1120580 | 0.816843 | 4.488000e-52 | -8.615850e-47 |
| Msa0829050 | Msa1131790 | 0.804001 | 2.664011e-49 | -8.615850e-47 |
| Msa0829050 | Msa1132980 | 0.831873 | 1.303780e-55 | -8.615850e-47 |
| Msa0829050 | Msa1157110 | 0.827459 | 1.546692e-54 | -8.615850e-47 |
| Msa0829050 | Msa1184400 | 0.845660 | 3.534828e-59 | -8.615850e-47 |
| Msa0829050 | Msa1225580 | 0.854954 | 8.723936e-62 | -8.615850e-47 |
| Msa0829050 | Msa1252810 | 0.807145 | 5.830573e-50 | -8.615850e-47 |
| Msa0829050 | Msa1355510 | 0.863741 | 2.005175e-64 | -8.615850e-47 |
| Msa0829050 | Msa1369320 | 0.802046 | 6.755187e-49 | -8.615850e-47 |
| Msa0829050 | Msa1369450 | 0.830560 | 2.741676e-55 | -8.615850e-47 |
| Msa0829050 | Msa1398900 | 0.830334 | 3.113655e-55 | -8.615850e-47 |
| Msa0829050 | Msa1422230 | 0.805215 | 1.486212e-49 | -8.615850e-47 |
| Msa0829050 | Msa1433410 | 0.822259 | 2.607305e-53 | -8.615850e-47 |
| Msa0829050 | Msa1435320 | 0.886233 | 4.086248e-72 | -8.615850e-47 |
| Msa0829050 | Msa1443400 | 0.887853 | 9.906980e-73 | -8.615850e-47 |
| Msa0829050 | Msa1448040 | 0.887943 | 9.151566e-73 | -8.615850e-47 |
| Msa0137860 | Msa0829050 | 0.829311 | 5.526948e-55 | -8.615850e-47 |
| Msa0151170 | Msa0829050 | 0.812861 | 3.426056e-51 | -8.615850e-47 |
| Msa0161560 | Msa0829050 | 0.821460 | 3.990958e-53 | -8.615850e-47 |
| Msa0164250 | Msa0829050 | 0.818834 | 1.593876e-52 | -8.615850e-47 |
| Msa0185100 | Msa0829050 | 0.826774 | 2.256053e-54 | -8.615850e-47 |
| Msa0193190 | Msa0829050 | 0.845944 | 2.960550e-59 | -8.615850e-47 |
| Msa0393100 | Msa0829050 | 0.824753 | 6.803330e-54 | -8.615850e-47 |
| Msa0397180 | Msa0829050 | 0.803786 | 2.951587e-49 | -8.615850e-47 |
| Msa0443450 | Msa0829050 | 0.809765 | 1.609673e-50 | -8.615850e-47 |
| Msa0476770 | Msa0829050 | 0.987837 | 1.013968e-171 | -8.615850e-47 |
| Msa0264680 | Msa0829050 | 0.863439 | 2.487081e-64 | -8.615850e-47 |
| Msa0273070 | Msa0829050 | 0.837163 | 6.112948e-57 | -8.615850e-47 |
| Msa0276430 | Msa0829050 | 0.812432 | 4.252596e-51 | -8.615850e-47 |
| Msa0302730 | Msa0829050 | 0.843099 | 1.725017e-58 | -8.615850e-47 |
| Msa0306310 | Msa0829050 | 0.890238 | 1.180452e-73 | -8.615850e-47 |
| Msa0316470 | Msa0829050 | 0.822154 | 2.757770e-53 | -8.615850e-47 |
| Msa0345890 | Msa0829050 | 0.821284 | 4.381110e-53 | -8.615850e-47 |
| Msa0345980 | Msa0829050 | 0.846179 | 2.555069e-59 | -8.615850e-47 |
| Msa0488580 | Msa0829050 | 0.827258 | 1.728218e-54 | -8.615850e-47 |
| Msa0521130 | Msa0829050 | 0.927894 | 6.215375e-92 | -8.615850e-47 |
| Msa0576560 | Msa0829050 | 0.805877 | 1.079525e-49 | -8.615850e-47 |
| Msa0590390 | Msa0829050 | 0.808668 | 2.766124e-50 | -8.615850e-47 |
| Msa0599220 | Msa0829050 | 0.801391 | 9.205780e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0829050 | MtrunA17_Chr3g0137271 | 98.330 | 479 | 4 | 2 | 9 | 487 | 1 | 475 | 0.0 | 942 |
| Msa0829050 | MtrunA17_Chr3g0137321 | 92.678 | 478 | 35 | 0 | 9 | 486 | 1 | 478 | 0.0 | 903 |
| Msa0829050 | MtrunA17_Chr3g0137261 | 91.841 | 478 | 39 | 0 | 9 | 486 | 3 | 480 | 0.0 | 867 |
| Msa0829050 | MtrunA17_Chr3g0137341 | 91.423 | 478 | 37 | 2 | 9 | 486 | 1 | 474 | 0.0 | 855 |
| Msa0829050 | MtrunA17_Chr1g0192071 | 91.632 | 478 | 32 | 1 | 9 | 486 | 3 | 472 | 0.0 | 851 |
| Msa0829050 | MtrunA17_Chr1g0186201 | 92.050 | 478 | 34 | 1 | 9 | 486 | 1 | 474 | 0.0 | 845 |
| Msa0829050 | MtrunA17_Chr1g0212211 | 75.376 | 532 | 74 | 5 | 9 | 486 | 1 | 529 | 0.0 | 761 |
| Msa0829050 | MtrunA17_Chr8g0364981 | 83.333 | 414 | 43 | 4 | 60 | 472 | 1 | 389 | 0.0 | 617 |
| Msa0829050 | MtrunA17_Chr1g0184991 | 92.713 | 247 | 18 | 0 | 9 | 255 | 1 | 247 | 3.86e-169 | 476 |
| Msa0829050 | MtrunA17_Chr3g0137301 | 91.710 | 193 | 16 | 0 | 293 | 485 | 1 | 193 | 2.36e-123 | 358 |
| Msa0829050 | MtrunA17_Chr1g0184981 | 89.691 | 194 | 17 | 1 | 293 | 486 | 1 | 191 | 9.13e-123 | 356 |
| Msa0829050 | MtrunA17_Chr3g0137311 | 83.916 | 143 | 23 | 0 | 1 | 143 | 11 | 153 | 7.45e-82 | 250 |
| Msa0829050 | MtrunA17_Chr3g0110461 | 83.333 | 42 | 7 | 0 | 121 | 162 | 1 | 42 | 2.45e-16 | 72.8 |
| Msa0829050 | MtrunA17_Chr8g0364991 | 82.051 | 39 | 7 | 0 | 9 | 47 | 1 | 39 | 6.05e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0829050 | AT5G25260.1 | 74.419 | 473 | 109 | 2 | 9 | 481 | 1 | 461 | 0.0 | 722 |
| Msa0829050 | AT5G25250.1 | 74.841 | 473 | 105 | 2 | 9 | 481 | 1 | 459 | 0.0 | 717 |
| Msa0829050 | AT5G64870.1 | 70.763 | 472 | 127 | 1 | 10 | 481 | 3 | 463 | 0.0 | 647 |
Find 122 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAATATTTCTCATATT+TGG | 0.034420 | 5_4:-2011781 | Msa0829050:CDS |
| CACTAGTCTTTCAGACTTTC+AGG | 0.104707 | 5_4:-2009942 | Msa0829050:three_prime_UTR |
| GTGAGATTGGTTTGAAATTA+AGG | 0.126017 | 5_4:-2011692 | Msa0829050:CDS |
| CTGCTTCCATTTGTGTCTTT+TGG | 0.142752 | 5_4:+2011757 | None:intergenic |
| GAGTTTAAACAAGAAGTATT+TGG | 0.198991 | 5_4:-2011882 | Msa0829050:CDS |
| ACTTCAAAGGTGTAATTTAC+AGG | 0.279006 | 5_4:+2012128 | None:intergenic |
| CATGAATATTTCTCATATTT+GGG | 0.285753 | 5_4:-2011780 | Msa0829050:CDS |
| AGGGATTACTTAATGATAAA+TGG | 0.291040 | 5_4:-2010269 | Msa0829050:CDS |
| CTGCTAAAGCCGTAGCTCTA+AGG | 0.291473 | 5_4:-2011452 | Msa0829050:CDS |
| ATATATATATCGACAATAAA+AGG | 0.294040 | 5_4:+2009975 | None:intergenic |
| AACAAGTTCCTTAACATGAT+TGG | 0.309318 | 5_4:+2011980 | None:intergenic |
| AGTTTAAACAAGAAGTATTT+GGG | 0.333241 | 5_4:-2011881 | Msa0829050:CDS |
| TCACAATACCTTGTGATAAC+TGG | 0.348490 | 5_4:-2012230 | Msa0829050:CDS |
| AGAGCTATATGCAAAGAAAA+AGG | 0.353826 | 5_4:-2010381 | Msa0829050:CDS |
| ATCATGAGGGGAAATTAGTT+TGG | 0.369987 | 5_4:+2012010 | None:intergenic |
| TGAGATTGGTTTGAAATTAA+GGG | 0.370549 | 5_4:-2011691 | Msa0829050:CDS |
| TGTAAATCAATAAACCGAAT+TGG | 0.376492 | 5_4:+2011838 | None:intergenic |
| GTAACATTCCCGTTTGTTCA+TGG | 0.378374 | 5_4:+2010072 | None:intergenic |
| AAGATTAGCATTTGGACTAA+TGG | 0.384982 | 5_4:-2010188 | Msa0829050:CDS |
| TATAGGTACAAGAAGCAAAC+TGG | 0.387176 | 5_4:-2010523 | Msa0829050:intron |
| TTAGTCCAAATGCTAATCTT+AGG | 0.400981 | 5_4:+2010191 | None:intergenic |
| GCTAAGATGAAAGGTGAGAT+TGG | 0.404823 | 5_4:-2011705 | Msa0829050:CDS |
| CAACTTGAACTAAACCAATT+CGG | 0.410262 | 5_4:-2011852 | Msa0829050:CDS |
| GGCTGAGGCTAATTCTGAAT+TGG | 0.413100 | 5_4:-2011526 | Msa0829050:CDS |
| TTGAGCCTAAGATTAGCATT+TGG | 0.413132 | 5_4:-2010196 | Msa0829050:CDS |
| CGGTCCTCGTGTGGATGATA+AGG | 0.423356 | 5_4:-2012051 | Msa0829050:CDS |
| ACTAATGGTGGTGATAATAG+TGG | 0.431222 | 5_4:-2010173 | Msa0829050:CDS |
| GAAGAAAGCGGCTTGGACTA+AGG | 0.439534 | 5_4:-2011499 | Msa0829050:CDS |
| TACCTTGTGATAACTGGAAT+CGG | 0.450729 | 5_4:-2012224 | Msa0829050:CDS |
| TAAACTCTCCAATCATGTTA+AGG | 0.453562 | 5_4:-2011988 | Msa0829050:CDS |
| AATGTTACCACCTGCTTGGA+TGG | 0.462701 | 5_4:-2010057 | Msa0829050:CDS |
| AAGACAGCGGGGAGAACAAA+AGG | 0.470694 | 5_4:+2012080 | None:intergenic |
| CATGTTAAGGAACTTGTTCA+AGG | 0.472007 | 5_4:-2011975 | Msa0829050:CDS |
| CTCCCCGCTGTCTTCACTAT+CGG | 0.478414 | 5_4:-2012071 | Msa0829050:CDS |
| TAAGACTGTCCATGAACAAA+CGG | 0.483381 | 5_4:-2010081 | Msa0829050:CDS |
| GGGAATAACTGAAGGTGCCA+TGG | 0.487818 | 5_4:-2010150 | Msa0829050:CDS |
| GAAACAACTACACAGCTGTA+AGG | 0.490449 | 5_4:-2010289 | Msa0829050:CDS |
| CTCAAGTCCGCGTACCGCCT+CGG | 0.491620 | 5_4:+2010214 | None:intergenic |
| TTTGGGCCAAAAGACACAAA+TGG | 0.502028 | 5_4:-2011763 | Msa0829050:CDS |
| CGGGAATGTTACCACCTGCT+TGG | 0.507160 | 5_4:-2010061 | Msa0829050:CDS |
| TGCTTCAATGACAATGGAAG+AGG | 0.507417 | 5_4:-2011922 | Msa0829050:CDS |
| CTCAAAATCAACCATGTACA+AGG | 0.508124 | 5_4:-2012264 | Msa0829050:CDS |
| CTAAGGGATGCTGAGTTACA+AGG | 0.508698 | 5_4:-2011435 | Msa0829050:CDS |
| GAGAGAAGCTGAAGTGGCTG+AGG | 0.509792 | 5_4:-2011541 | Msa0829050:CDS |
| CTTGTTCAAGGAATCATTGA+AGG | 0.510892 | 5_4:-2011963 | Msa0829050:CDS |
| TTGGACTAAGGCGGCTCAAG+TGG | 0.511474 | 5_4:-2011487 | Msa0829050:CDS |
| GAATCAGAGAGAAGCTGAAG+TGG | 0.511635 | 5_4:-2011547 | Msa0829050:CDS |
| GTTATTGCGATGCAGAGGGC+TGG | 0.513050 | 5_4:-2011621 | Msa0829050:CDS |
| GGACCGATAGTGAAGACAGC+GGG | 0.513792 | 5_4:+2012068 | None:intergenic |
| AAGACTGTCCATGAACAAAC+GGG | 0.515531 | 5_4:-2010080 | Msa0829050:CDS |
| GGCTCAAGTGGCCGAAGTTG+AGG | 0.521394 | 5_4:-2011475 | Msa0829050:CDS |
| GCTGGAGAGGGCGACAAGGA+GGG | 0.521545 | 5_4:-2011603 | Msa0829050:CDS |
| GAAGACGGAGTAGGATTGAC+CGG | 0.524836 | 5_4:+2012160 | None:intergenic |
| GAGGGCTGGAGAGGGCGACA+AGG | 0.525696 | 5_4:-2011607 | Msa0829050:CDS |
| GTAACACTTGGGAATGCTCA+AGG | 0.527999 | 5_4:-2010344 | Msa0829050:CDS |
| TGCTAAAGCCGTAGCTCTAA+GGG | 0.534229 | 5_4:-2011451 | Msa0829050:CDS |
| GGAATAACTGAAGGTGCCAT+GGG | 0.534697 | 5_4:-2010149 | Msa0829050:CDS |
| AGCAACTTCTTTCATACCCA+TGG | 0.534773 | 5_4:+2010133 | None:intergenic |
| GGCAAGACTCCCATCCAAGC+AGG | 0.534806 | 5_4:+2010047 | None:intergenic |
| GCAGAGGGAATTGTAACACT+TGG | 0.536418 | 5_4:-2010356 | Msa0829050:CDS |
| GGCTGGAGAGGGCGACAAGG+AGG | 0.536888 | 5_4:-2011604 | Msa0829050:CDS |
| GCTCATTGCTTGAACTTCAA+AGG | 0.540493 | 5_4:+2012115 | None:intergenic |
| GCGATGCAGAGGGCTGGAGA+GGG | 0.540981 | 5_4:-2011615 | Msa0829050:CDS |
| CTCAGCATCCCTTAGAGCTA+CGG | 0.547484 | 5_4:+2011443 | None:intergenic |
| TGCGATGCAGAGGGCTGGAG+AGG | 0.550159 | 5_4:-2011616 | Msa0829050:CDS |
| ATTGAACGCTAGCTTTGCTA+AGG | 0.553614 | 5_4:+2011358 | None:intergenic |
| TAAAGCTTGCAAAGAAAGCA+TGG | 0.553863 | 5_4:-2012190 | Msa0829050:CDS |
| TTAGTTTGGCGTATTTGAGA+AGG | 0.553890 | 5_4:+2012024 | None:intergenic |
| TAAAGTGAGGACTGAAGTGA+AGG | 0.556664 | 5_4:-2011577 | Msa0829050:CDS |
| TGGCTAAGAAGAAAGCGGCT+TGG | 0.558254 | 5_4:-2011506 | Msa0829050:CDS |
| AAACAGTTAGTTGATGTGCC+AGG | 0.562976 | 5_4:-2011804 | Msa0829050:CDS |
| TTTGTATGAGAAGAAGGCAG+AGG | 0.567950 | 5_4:-2010465 | Msa0829050:CDS |
| ATGTTACCACCTGCTTGGAT+GGG | 0.569893 | 5_4:-2010056 | Msa0829050:CDS |
| GGAGCTGTACAAGAAACAAA+AGG | 0.571542 | 5_4:-2010501 | Msa0829050:CDS |
| ATTGGTTTGAAATTAAGGGA+AGG | 0.574015 | 5_4:-2011687 | Msa0829050:CDS |
| TCATGGACAGTCTTAAACAA+AGG | 0.574375 | 5_4:+2010089 | None:intergenic |
| TGGAAGCAGCGAATCAAGCA+AGG | 0.574713 | 5_4:-2011743 | Msa0829050:CDS |
| CTTCACTATCGGTCCTCGTG+TGG | 0.576587 | 5_4:-2012060 | Msa0829050:CDS |
| TGAGAGGTCGAAGACGGAGT+AGG | 0.579128 | 5_4:+2012151 | None:intergenic |
| ATGGGTATGAAAGAAGTTGC+TGG | 0.579940 | 5_4:-2010131 | Msa0829050:CDS |
| TAACACTTGGGAATGCTCAA+GGG | 0.580610 | 5_4:-2010343 | Msa0829050:CDS |
| CCTCGCTGCTTCAATGACAA+TGG | 0.585018 | 5_4:-2011928 | Msa0829050:CDS |
| AAACAACTACACAGCTGTAA+GGG | 0.585417 | 5_4:-2010288 | Msa0829050:CDS |
| CTAATGGTGGTGATAATAGT+GGG | 0.587233 | 5_4:-2010172 | Msa0829050:CDS |
| GGCTTTAGCAGCCTCAACTT+CGG | 0.588855 | 5_4:+2011464 | None:intergenic |
| ATTAGCATTTGGACTAATGG+TGG | 0.590526 | 5_4:-2010185 | Msa0829050:CDS |
| GATTGGAGAGTTTATCATGA+GGG | 0.592992 | 5_4:+2011997 | None:intergenic |
| AGTGCACTTCTGAATGCACT+TGG | 0.593608 | 5_4:-2010311 | Msa0829050:CDS |
| CAAAGGTTATTGCGATGCAG+AGG | 0.594400 | 5_4:-2011626 | Msa0829050:CDS |
| TTCCGATTCCAGTTATCACA+AGG | 0.603437 | 5_4:+2012222 | None:intergenic |
| GTATCAGAAGCTAAGATGAA+AGG | 0.607033 | 5_4:-2011714 | Msa0829050:CDS |
| AGTTACAAGGTGAAGTTGAG+AGG | 0.609202 | 5_4:-2011422 | Msa0829050:CDS |
| ATTGGAGAGTTTATCATGAG+GGG | 0.615848 | 5_4:+2011998 | None:intergenic |
| TGAATTGGCTAAGAAGAAAG+CGG | 0.615999 | 5_4:-2011511 | Msa0829050:CDS |
| CAGAGGGAATTGTAACACTT+GGG | 0.616845 | 5_4:-2010355 | Msa0829050:CDS |
| ATAGGTACAAGAAGCAAACT+GGG | 0.617338 | 5_4:-2010522 | Msa0829050:intron |
| TACAGGTGAGAGGTCGAAGA+CGG | 0.620713 | 5_4:+2012145 | None:intergenic |
| AAAGGTTATTGCGATGCAGA+GGG | 0.625617 | 5_4:-2011625 | Msa0829050:CDS |
| GTACAAGAAACAAAAGGAGG+CGG | 0.626062 | 5_4:-2010495 | Msa0829050:CDS |
| AACACTTGGGAATGCTCAAG+GGG | 0.627744 | 5_4:-2010342 | Msa0829050:CDS |
| AATGGTGGTGATAATAGTGG+GGG | 0.629638 | 5_4:-2010170 | Msa0829050:CDS |
| AGGTGTAATTTACAGGTGAG+AGG | 0.630097 | 5_4:+2012135 | None:intergenic |
| TAATGGTGGTGATAATAGTG+GGG | 0.634711 | 5_4:-2010171 | Msa0829050:CDS |
| GATTACTTAATGATAAATGG+TGG | 0.642965 | 5_4:-2010266 | Msa0829050:CDS |
| GATTGCTAAGATTAATGCCG+AGG | 0.643593 | 5_4:-2010231 | Msa0829050:CDS |
| TGGACAGTCTTAAACAAAGG+TGG | 0.647859 | 5_4:+2010092 | None:intergenic |
| TATGAGAAATATTCATGACC+TGG | 0.653740 | 5_4:+2011786 | None:intergenic |
| AAGACGGAGTAGGATTGACC+GGG | 0.657113 | 5_4:+2012161 | None:intergenic |
| TGCTAAGATTAATGCCGAGG+CGG | 0.661554 | 5_4:-2010228 | Msa0829050:CDS |
| TAGCGTTCAATATGAAACCA+AGG | 0.661629 | 5_4:-2011346 | Msa0829050:intron |
| AAGAAAGCATGGATTCTACC+CGG | 0.664070 | 5_4:-2012179 | Msa0829050:CDS |
| GGAAGCAGCGAATCAAGCAA+GGG | 0.666342 | 5_4:-2011742 | Msa0829050:CDS |
| TGATTGGAGAGTTTATCATG+AGG | 0.672105 | 5_4:+2011996 | None:intergenic |
| AAGACTCCCATCCAAGCAGG+TGG | 0.679480 | 5_4:+2010050 | None:intergenic |
| ATTAATGCCGAGGCGGTACG+CGG | 0.680968 | 5_4:-2010221 | Msa0829050:CDS |
| ACAAGGAGGGAATTAAAGTG+AGG | 0.693697 | 5_4:-2011590 | Msa0829050:CDS |
| CTTTCCTTATCATCCACACG+AGG | 0.701431 | 5_4:+2012047 | None:intergenic |
| CCATTGTCATTGAAGCAGCG+AGG | 0.707893 | 5_4:+2011928 | None:intergenic |
| GACCGATAGTGAAGACAGCG+GGG | 0.713902 | 5_4:+2012069 | None:intergenic |
| GCTGTACAAGAAACAAAAGG+AGG | 0.725038 | 5_4:-2010498 | Msa0829050:CDS |
| GAAAGCGGCTTGGACTAAGG+CGG | 0.747622 | 5_4:-2011496 | Msa0829050:CDS |
| AGGACCGATAGTGAAGACAG+CGG | 0.753084 | 5_4:+2012067 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTATTGATTCTTTTATA+TGG | - | chr5_4:2011276-2011295 | Msa0829050:intron | 15.0% |
| !!! | GTTGCATTTTTTTAAATAAT+TGG | - | chr5_4:2011309-2011328 | Msa0829050:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | + | chr5_4:2011579-2011598 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | - | chr5_4:2011581-2011600 | Msa0829050:CDS | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | + | chr5_4:2012229-2012248 | None:intergenic | 15.0% |
| !!! | TGATTATTGATTCTTTTATA+TGG | - | chr5_4:2011276-2011295 | Msa0829050:intron | 15.0% |
| !!! | GTTGCATTTTTTTAAATAAT+TGG | - | chr5_4:2011309-2011328 | Msa0829050:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | + | chr5_4:2011579-2011598 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | - | chr5_4:2011581-2011600 | Msa0829050:CDS | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | + | chr5_4:2012229-2012248 | None:intergenic | 15.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | - | chr5_4:2010320-2010339 | Msa0829050:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | - | chr5_4:2010420-2010439 | Msa0829050:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | - | chr5_4:2010421-2010440 | Msa0829050:CDS | 20.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | - | chr5_4:2010320-2010339 | Msa0829050:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | - | chr5_4:2010420-2010439 | Msa0829050:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | - | chr5_4:2010421-2010440 | Msa0829050:CDS | 20.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | - | chr5_4:2010319-2010338 | Msa0829050:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | + | chr5_4:2010366-2010385 | None:intergenic | 25.0% |
| !!! | TGAGATTGGTTTGAAATTAA+GGG | - | chr5_4:2010510-2010529 | Msa0829050:CDS | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | - | chr5_4:2011011-2011030 | Msa0829050:intron | 25.0% |
| ! | CATTTGGTTAAACCTTAAAA+GGG | + | chr5_4:2011136-2011155 | None:intergenic | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+AGG | + | chr5_4:2011137-2011156 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | + | chr5_4:2011365-2011384 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | - | chr5_4:2011533-2011552 | Msa0829050:CDS | 25.0% |
| ! | ATATATTTACTAGGCCTAAT+AGG | + | chr5_4:2011598-2011617 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | - | chr5_4:2011651-2011670 | Msa0829050:CDS | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | - | chr5_4:2011932-2011951 | Msa0829050:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | - | chr5_4:2011935-2011954 | Msa0829050:CDS | 25.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | - | chr5_4:2010319-2010338 | Msa0829050:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | + | chr5_4:2010366-2010385 | None:intergenic | 25.0% |
| !!! | TGAGATTGGTTTGAAATTAA+GGG | - | chr5_4:2010510-2010529 | Msa0829050:CDS | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | - | chr5_4:2011011-2011030 | Msa0829050:intron | 25.0% |
| ! | CATTTGGTTAAACCTTAAAA+GGG | + | chr5_4:2011136-2011155 | None:intergenic | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+AGG | + | chr5_4:2011137-2011156 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | + | chr5_4:2011365-2011384 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | - | chr5_4:2011533-2011552 | Msa0829050:CDS | 25.0% |
| ! | ATATATTTACTAGGCCTAAT+AGG | + | chr5_4:2011598-2011617 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | - | chr5_4:2011651-2011670 | Msa0829050:CDS | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | - | chr5_4:2011932-2011951 | Msa0829050:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | - | chr5_4:2011935-2011954 | Msa0829050:CDS | 25.0% |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | + | chr5_4:2010076-2010095 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | - | chr5_4:2010213-2010232 | Msa0829050:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | + | chr5_4:2010224-2010243 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | - | chr5_4:2010349-2010368 | Msa0829050:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | + | chr5_4:2010418-2010437 | None:intergenic | 30.0% | |
| !! | GTGAGATTGGTTTGAAATTA+AGG | - | chr5_4:2010509-2010528 | Msa0829050:CDS | 30.0% |
| !! | ATTGGTTTGAAATTAAGGGA+AGG | - | chr5_4:2010514-2010533 | Msa0829050:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | - | chr5_4:2010558-2010577 | Msa0829050:intron | 30.0% | |
| !! | GTTTTAAACTCTCCCTTTTA+AGG | - | chr5_4:2011121-2011140 | Msa0829050:intron | 30.0% |
| ! | TCAACACTATTTTACAACCT+TGG | - | chr5_4:2011384-2011403 | Msa0829050:CDS | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | - | chr5_4:2011391-2011410 | Msa0829050:CDS | 30.0% |
| TACTATAATGAGATCACAGT+TGG | - | chr5_4:2011460-2011479 | Msa0829050:CDS | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | + | chr5_4:2011515-2011534 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | + | chr5_4:2011516-2011535 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | - | chr5_4:2011661-2011680 | Msa0829050:CDS | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | - | chr5_4:2011820-2011839 | Msa0829050:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | + | chr5_4:2012013-2012032 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | - | chr5_4:2012013-2012032 | Msa0829050:CDS | 30.0% | |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | + | chr5_4:2010076-2010095 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | - | chr5_4:2010213-2010232 | Msa0829050:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | + | chr5_4:2010224-2010243 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | - | chr5_4:2010349-2010368 | Msa0829050:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | + | chr5_4:2010418-2010437 | None:intergenic | 30.0% | |
| !! | GTGAGATTGGTTTGAAATTA+AGG | - | chr5_4:2010509-2010528 | Msa0829050:CDS | 30.0% |
| !! | ATTGGTTTGAAATTAAGGGA+AGG | - | chr5_4:2010514-2010533 | Msa0829050:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | - | chr5_4:2010558-2010577 | Msa0829050:intron | 30.0% | |
| !! | GTTTTAAACTCTCCCTTTTA+AGG | - | chr5_4:2011121-2011140 | Msa0829050:intron | 30.0% |
| ! | TCAACACTATTTTACAACCT+TGG | - | chr5_4:2011384-2011403 | Msa0829050:CDS | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | - | chr5_4:2011391-2011410 | Msa0829050:CDS | 30.0% |
| TACTATAATGAGATCACAGT+TGG | - | chr5_4:2011460-2011479 | Msa0829050:CDS | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | + | chr5_4:2011515-2011534 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | + | chr5_4:2011516-2011535 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | - | chr5_4:2011661-2011680 | Msa0829050:CDS | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | - | chr5_4:2011820-2011839 | Msa0829050:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | + | chr5_4:2012013-2012032 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | - | chr5_4:2012013-2012032 | Msa0829050:CDS | 30.0% | |
| CTCAAAATCAACCATGTACA+AGG | - | chr5_4:2009937-2009956 | Msa0829050:three_prime_UTR | 35.0% | |
| TCACAATACCTTGTGATAAC+TGG | - | chr5_4:2009971-2009990 | Msa0829050:three_prime_UTR | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | - | chr5_4:2009977-2009996 | Msa0829050:three_prime_UTR | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | - | chr5_4:2010011-2010030 | Msa0829050:exon | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | + | chr5_4:2010180-2010199 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | + | chr5_4:2010194-2010213 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | + | chr5_4:2010206-2010225 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | + | chr5_4:2010207-2010226 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | + | chr5_4:2010208-2010227 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | - | chr5_4:2010226-2010245 | Msa0829050:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | - | chr5_4:2010238-2010257 | Msa0829050:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | - | chr5_4:2010487-2010506 | Msa0829050:CDS | 35.0% | |
| TGAATTGGCTAAGAAGAAAG+CGG | - | chr5_4:2010690-2010709 | Msa0829050:intron | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | - | chr5_4:2010855-2010874 | Msa0829050:intron | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | + | chr5_4:2010875-2010894 | None:intergenic | 35.0% | |
| ACTCATGATCAATGGACAAT+GGG | - | chr5_4:2011162-2011181 | Msa0829050:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | + | chr5_4:2011404-2011423 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | + | chr5_4:2011514-2011533 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | - | chr5_4:2011655-2011674 | Msa0829050:CDS | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | - | chr5_4:2011678-2011697 | Msa0829050:CDS | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | - | chr5_4:2011679-2011698 | Msa0829050:CDS | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | - | chr5_4:2011730-2011749 | Msa0829050:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | - | chr5_4:2011823-2011842 | Msa0829050:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | - | chr5_4:2011913-2011932 | Msa0829050:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | - | chr5_4:2012005-2012024 | Msa0829050:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | - | chr5_4:2012016-2012035 | Msa0829050:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | - | chr5_4:2012028-2012047 | Msa0829050:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | - | chr5_4:2012029-2012048 | Msa0829050:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | - | chr5_4:2012030-2012049 | Msa0829050:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | + | chr5_4:2012115-2012134 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | - | chr5_4:2012120-2012139 | Msa0829050:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | + | chr5_4:2012178-2012197 | None:intergenic | 35.0% |
| CTCAAAATCAACCATGTACA+AGG | - | chr5_4:2009937-2009956 | Msa0829050:three_prime_UTR | 35.0% | |
| TCACAATACCTTGTGATAAC+TGG | - | chr5_4:2009971-2009990 | Msa0829050:three_prime_UTR | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | - | chr5_4:2009977-2009996 | Msa0829050:three_prime_UTR | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | - | chr5_4:2010011-2010030 | Msa0829050:exon | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | + | chr5_4:2010180-2010199 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | + | chr5_4:2010194-2010213 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | + | chr5_4:2010206-2010225 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | + | chr5_4:2010207-2010226 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | + | chr5_4:2010208-2010227 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | - | chr5_4:2010226-2010245 | Msa0829050:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | - | chr5_4:2010238-2010257 | Msa0829050:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | - | chr5_4:2010487-2010506 | Msa0829050:CDS | 35.0% | |
| TGAATTGGCTAAGAAGAAAG+CGG | - | chr5_4:2010690-2010709 | Msa0829050:intron | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | - | chr5_4:2010855-2010874 | Msa0829050:intron | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | + | chr5_4:2010875-2010894 | None:intergenic | 35.0% | |
| ACTCATGATCAATGGACAAT+GGG | - | chr5_4:2011162-2011181 | Msa0829050:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | + | chr5_4:2011404-2011423 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | + | chr5_4:2011514-2011533 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | - | chr5_4:2011655-2011674 | Msa0829050:CDS | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | - | chr5_4:2011678-2011697 | Msa0829050:CDS | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | - | chr5_4:2011679-2011698 | Msa0829050:CDS | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | - | chr5_4:2011730-2011749 | Msa0829050:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | - | chr5_4:2011823-2011842 | Msa0829050:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | - | chr5_4:2011913-2011932 | Msa0829050:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | - | chr5_4:2012005-2012024 | Msa0829050:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | - | chr5_4:2012016-2012035 | Msa0829050:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | - | chr5_4:2012028-2012047 | Msa0829050:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | - | chr5_4:2012029-2012048 | Msa0829050:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | - | chr5_4:2012030-2012049 | Msa0829050:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | + | chr5_4:2012115-2012134 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | - | chr5_4:2012120-2012139 | Msa0829050:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | + | chr5_4:2012178-2012197 | None:intergenic | 35.0% |
| ! | TGCTTTTGCTACCTTGTACA+TGG | + | chr5_4:2009951-2009970 | None:intergenic | 40.0% |
| TTCCGATTCCAGTTATCACA+AGG | + | chr5_4:2009982-2010001 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | - | chr5_4:2010022-2010041 | Msa0829050:exon | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | + | chr5_4:2010069-2010088 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | + | chr5_4:2010089-2010108 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | - | chr5_4:2010279-2010298 | Msa0829050:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | - | chr5_4:2010289-2010308 | Msa0829050:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | - | chr5_4:2010397-2010416 | Msa0829050:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | - | chr5_4:2010438-2010457 | Msa0829050:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | + | chr5_4:2010447-2010466 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | - | chr5_4:2010496-2010515 | Msa0829050:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | - | chr5_4:2010576-2010595 | Msa0829050:intron | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | - | chr5_4:2010611-2010630 | Msa0829050:intron | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | - | chr5_4:2010624-2010643 | Msa0829050:intron | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | - | chr5_4:2010779-2010798 | Msa0829050:intron | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | + | chr5_4:2010846-2010865 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | + | chr5_4:2011152-2011171 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | - | chr5_4:2011154-2011173 | Msa0829050:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | - | chr5_4:2011161-2011180 | Msa0829050:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | + | chr5_4:2011513-2011532 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | - | chr5_4:2011700-2011719 | Msa0829050:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | - | chr5_4:2011703-2011722 | Msa0829050:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | - | chr5_4:2011706-2011725 | Msa0829050:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | - | chr5_4:2011736-2011755 | Msa0829050:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | - | chr5_4:2011846-2011865 | Msa0829050:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | - | chr5_4:2011858-2011877 | Msa0829050:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | - | chr5_4:2011912-2011931 | Msa0829050:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | - | chr5_4:2011970-2011989 | Msa0829050:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | - | chr5_4:2012031-2012050 | Msa0829050:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | - | chr5_4:2012043-2012062 | Msa0829050:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | + | chr5_4:2012071-2012090 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | - | chr5_4:2012070-2012089 | Msa0829050:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | + | chr5_4:2012112-2012131 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | - | chr5_4:2012121-2012140 | Msa0829050:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | + | chr5_4:2012132-2012151 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | - | chr5_4:2012174-2012193 | Msa0829050:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | - | chr5_4:2012259-2012278 | Msa0829050:CDS | 40.0% |
| ! | TGCTTTTGCTACCTTGTACA+TGG | + | chr5_4:2009951-2009970 | None:intergenic | 40.0% |
| TTCCGATTCCAGTTATCACA+AGG | + | chr5_4:2009982-2010001 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | - | chr5_4:2010022-2010041 | Msa0829050:exon | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | + | chr5_4:2010069-2010088 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | + | chr5_4:2010089-2010108 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | - | chr5_4:2010279-2010298 | Msa0829050:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | - | chr5_4:2010289-2010308 | Msa0829050:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | - | chr5_4:2010397-2010416 | Msa0829050:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | - | chr5_4:2010438-2010457 | Msa0829050:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | + | chr5_4:2010447-2010466 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | - | chr5_4:2010496-2010515 | Msa0829050:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | - | chr5_4:2010576-2010595 | Msa0829050:intron | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | - | chr5_4:2010611-2010630 | Msa0829050:intron | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | - | chr5_4:2010624-2010643 | Msa0829050:intron | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | - | chr5_4:2010779-2010798 | Msa0829050:intron | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | + | chr5_4:2010846-2010865 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | + | chr5_4:2011152-2011171 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | - | chr5_4:2011154-2011173 | Msa0829050:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | - | chr5_4:2011161-2011180 | Msa0829050:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | + | chr5_4:2011513-2011532 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | - | chr5_4:2011700-2011719 | Msa0829050:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | - | chr5_4:2011703-2011722 | Msa0829050:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | - | chr5_4:2011706-2011725 | Msa0829050:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | - | chr5_4:2011736-2011755 | Msa0829050:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | - | chr5_4:2011846-2011865 | Msa0829050:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | - | chr5_4:2011858-2011877 | Msa0829050:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | - | chr5_4:2011912-2011931 | Msa0829050:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | - | chr5_4:2011970-2011989 | Msa0829050:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | - | chr5_4:2012031-2012050 | Msa0829050:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | - | chr5_4:2012043-2012062 | Msa0829050:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | + | chr5_4:2012071-2012090 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | - | chr5_4:2012070-2012089 | Msa0829050:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | + | chr5_4:2012112-2012131 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | - | chr5_4:2012121-2012140 | Msa0829050:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | + | chr5_4:2012132-2012151 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | - | chr5_4:2012174-2012193 | Msa0829050:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | - | chr5_4:2012259-2012278 | Msa0829050:CDS | 40.0% |
| CTTTCCTTATCATCCACACG+AGG | + | chr5_4:2010157-2010176 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | - | chr5_4:2010575-2010594 | Msa0829050:intron | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | - | chr5_4:2010654-2010673 | Msa0829050:intron | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | - | chr5_4:2010675-2010694 | Msa0829050:intron | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | - | chr5_4:2010750-2010769 | Msa0829050:intron | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | - | chr5_4:2010766-2010785 | Msa0829050:intron | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | - | chr5_4:2011829-2011848 | Msa0829050:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | - | chr5_4:2011830-2011849 | Msa0829050:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | - | chr5_4:2011845-2011864 | Msa0829050:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | - | chr5_4:2011857-2011876 | Msa0829050:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | - | chr5_4:2011859-2011878 | Msa0829050:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | - | chr5_4:2011890-2011909 | Msa0829050:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | - | chr5_4:2011973-2011992 | Msa0829050:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | - | chr5_4:2012052-2012071 | Msa0829050:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | - | chr5_4:2012144-2012163 | Msa0829050:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | - | chr5_4:2012145-2012164 | Msa0829050:CDS | 45.0% | |
| CTTTCCTTATCATCCACACG+AGG | + | chr5_4:2010157-2010176 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | - | chr5_4:2010575-2010594 | Msa0829050:intron | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | - | chr5_4:2010654-2010673 | Msa0829050:intron | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | - | chr5_4:2010675-2010694 | Msa0829050:intron | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | - | chr5_4:2010750-2010769 | Msa0829050:intron | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | - | chr5_4:2010766-2010785 | Msa0829050:intron | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | - | chr5_4:2011829-2011848 | Msa0829050:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | - | chr5_4:2011830-2011849 | Msa0829050:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | - | chr5_4:2011845-2011864 | Msa0829050:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | - | chr5_4:2011857-2011876 | Msa0829050:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | - | chr5_4:2011859-2011878 | Msa0829050:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | - | chr5_4:2011890-2011909 | Msa0829050:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | - | chr5_4:2011973-2011992 | Msa0829050:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | - | chr5_4:2012052-2012071 | Msa0829050:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | - | chr5_4:2012144-2012163 | Msa0829050:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | - | chr5_4:2012145-2012164 | Msa0829050:CDS | 45.0% | |
| !!! | ATAAAAGATTAATATTTTTA+AGG | - | chr5_4:2011187-2011206 | Msa0829050:intron | 5.0% |
| !! | ATATATATAATATATTTACT+AGG | + | chr5_4:2011607-2011626 | None:intergenic | 5.0% |
| !!! | ATAAAAGATTAATATTTTTA+AGG | - | chr5_4:2011187-2011206 | Msa0829050:intron | 5.0% |
| !! | ATATATATAATATATTTACT+AGG | + | chr5_4:2011607-2011626 | None:intergenic | 5.0% |
| AAGACGGAGTAGGATTGACC+GGG | + | chr5_4:2010043-2010062 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | + | chr5_4:2010044-2010063 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | + | chr5_4:2010059-2010078 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | + | chr5_4:2010124-2010143 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | + | chr5_4:2010137-2010156 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | + | chr5_4:2010276-2010295 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | - | chr5_4:2010273-2010292 | Msa0829050:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | - | chr5_4:2010458-2010477 | Msa0829050:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | - | chr5_4:2010459-2010478 | Msa0829050:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | - | chr5_4:2010695-2010714 | Msa0829050:intron | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | - | chr5_4:2010702-2010721 | Msa0829050:intron | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | + | chr5_4:2010740-2010759 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | - | chr5_4:2010749-2010768 | Msa0829050:intron | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | + | chr5_4:2010761-2010780 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | + | chr5_4:2011499-2011518 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | - | chr5_4:2012051-2012070 | Msa0829050:CDS | 50.0% |
| AAGACGGAGTAGGATTGACC+GGG | + | chr5_4:2010043-2010062 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | + | chr5_4:2010044-2010063 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | + | chr5_4:2010059-2010078 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | + | chr5_4:2010124-2010143 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | + | chr5_4:2010137-2010156 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | + | chr5_4:2010276-2010295 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | - | chr5_4:2010273-2010292 | Msa0829050:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | - | chr5_4:2010458-2010477 | Msa0829050:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | - | chr5_4:2010459-2010478 | Msa0829050:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | - | chr5_4:2010695-2010714 | Msa0829050:intron | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | - | chr5_4:2010702-2010721 | Msa0829050:intron | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | + | chr5_4:2010740-2010759 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | - | chr5_4:2010749-2010768 | Msa0829050:intron | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | + | chr5_4:2010761-2010780 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | + | chr5_4:2011499-2011518 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | - | chr5_4:2012051-2012070 | Msa0829050:CDS | 50.0% |
| TGAGAGGTCGAAGACGGAGT+AGG | + | chr5_4:2010053-2010072 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | - | chr5_4:2010130-2010149 | Msa0829050:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | + | chr5_4:2010135-2010154 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | + | chr5_4:2010136-2010155 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | - | chr5_4:2010141-2010160 | Msa0829050:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | - | chr5_4:2010150-2010169 | Msa0829050:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | - | chr5_4:2010580-2010599 | Msa0829050:intron | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | - | chr5_4:2010660-2010679 | Msa0829050:intron | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | - | chr5_4:2010705-2010724 | Msa0829050:intron | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | - | chr5_4:2010714-2010733 | Msa0829050:intron | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | + | chr5_4:2011500-2011519 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | - | chr5_4:2011980-2011999 | Msa0829050:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | - | chr5_4:2012140-2012159 | Msa0829050:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | + | chr5_4:2012154-2012173 | None:intergenic | 55.0% | |
| TGAGAGGTCGAAGACGGAGT+AGG | + | chr5_4:2010053-2010072 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | - | chr5_4:2010130-2010149 | Msa0829050:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | + | chr5_4:2010135-2010154 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | + | chr5_4:2010136-2010155 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | - | chr5_4:2010141-2010160 | Msa0829050:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | - | chr5_4:2010150-2010169 | Msa0829050:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | - | chr5_4:2010580-2010599 | Msa0829050:intron | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | - | chr5_4:2010660-2010679 | Msa0829050:intron | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | - | chr5_4:2010705-2010724 | Msa0829050:intron | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | - | chr5_4:2010714-2010733 | Msa0829050:intron | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | + | chr5_4:2011500-2011519 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | - | chr5_4:2011980-2011999 | Msa0829050:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | - | chr5_4:2012140-2012159 | Msa0829050:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | + | chr5_4:2012154-2012173 | None:intergenic | 55.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | - | chr5_4:2010726-2010745 | Msa0829050:intron | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | + | chr5_4:2012157-2012176 | None:intergenic | 60.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | - | chr5_4:2010726-2010745 | Msa0829050:intron | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | + | chr5_4:2012157-2012176 | None:intergenic | 60.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | - | chr5_4:2010585-2010604 | Msa0829050:intron | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | - | chr5_4:2010586-2010605 | Msa0829050:intron | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | - | chr5_4:2010598-2010617 | Msa0829050:intron | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | + | chr5_4:2011990-2012009 | None:intergenic | 65.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | - | chr5_4:2010585-2010604 | Msa0829050:intron | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | - | chr5_4:2010586-2010605 | Msa0829050:intron | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | - | chr5_4:2010598-2010617 | Msa0829050:intron | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | + | chr5_4:2011990-2012009 | None:intergenic | 65.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | - | chr5_4:2010594-2010613 | Msa0829050:intron | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | - | chr5_4:2010597-2010616 | Msa0829050:intron | 70.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | - | chr5_4:2010594-2010613 | Msa0829050:intron | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | - | chr5_4:2010597-2010616 | Msa0829050:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 2009926 | 2012297 | 2009926 | ID=Msa0829050;Name=Msa0829050 |
| chr5_4 | mRNA | 2009926 | 2012297 | 2009926 | ID=Msa0829050-mRNA-1;Parent=Msa0829050;Name=Msa0829050-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|1|0.5|1|1|1|2|102|487 |
| chr5_4 | exon | 2009926 | 2010540 | 2009926 | ID=Msa0829050-mRNA-1:exon:643;Parent=Msa0829050-mRNA-1 |
| chr5_4 | exon | 2011347 | 2012297 | 2011347 | ID=Msa0829050-mRNA-1:exon:642;Parent=Msa0829050-mRNA-1 |
| chr5_4 | CDS | 2011347 | 2012297 | 2011347 | ID=Msa0829050-mRNA-1:cds;Parent=Msa0829050-mRNA-1 |
| chr5_4 | CDS | 2010028 | 2010540 | 2010028 | ID=Msa0829050-mRNA-1:cds;Parent=Msa0829050-mRNA-1 |
| chr5_4 | three_prime_UTR | 2009926 | 2010027 | 2009926 | ID=Msa0829050-mRNA-1:three_prime_utr;Parent=Msa0829050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
