Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092970 | sp|D2XNR1|FLOT4_MEDTR | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092970 | G7JAE5 | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005260 | Msa0092970 | 0.811265 | 7.633085e-51 | -8.615850e-47 |
| Msa0022470 | Msa0092970 | 0.833228 | 6.015214e-56 | -8.615850e-47 |
| Msa0026420 | Msa0092970 | 0.803815 | 2.910898e-49 | -8.615850e-47 |
| Msa0030800 | Msa0092970 | 0.810159 | 1.324222e-50 | -8.615850e-47 |
| Msa0071470 | Msa0092970 | 0.837481 | 5.068827e-57 | -8.615850e-47 |
| Msa0078210 | Msa0092970 | 0.813375 | 2.642665e-51 | -8.615850e-47 |
| Msa0086360 | Msa0092970 | 0.835391 | 1.724469e-56 | -8.615850e-47 |
| Msa0090380 | Msa0092970 | 0.821272 | 4.410682e-53 | -8.615850e-47 |
| Msa0092970 | Msa0104810 | 0.841137 | 5.700456e-58 | -8.615850e-47 |
| Msa0092970 | Msa0118010 | 0.832887 | 7.312796e-56 | -8.615850e-47 |
| Msa0092970 | Msa0119430 | 0.810948 | 8.942512e-51 | -8.615850e-47 |
| Msa0092970 | Msa0137860 | 0.829249 | 5.721046e-55 | -8.615850e-47 |
| Msa0092970 | Msa0143640 | 0.800452 | 1.431940e-48 | -8.615850e-47 |
| Msa0092970 | Msa0151170 | 0.810999 | 8.717040e-51 | -8.615850e-47 |
| Msa0092970 | Msa0161560 | 0.840887 | 6.631690e-58 | -8.615850e-47 |
| Msa0092970 | Msa0162680 | 0.810511 | 1.111351e-50 | -8.615850e-47 |
| Msa0092970 | Msa0164250 | 0.838154 | 3.402742e-57 | -8.615850e-47 |
| Msa0092970 | Msa0185100 | 0.865455 | 5.830912e-65 | -8.615850e-47 |
| Msa0092970 | Msa0193190 | 0.875141 | 3.893233e-68 | -8.615850e-47 |
| Msa0092970 | Msa0204170 | 0.830818 | 2.370824e-55 | -8.615850e-47 |
| Msa0092970 | Msa0218090 | 0.807945 | 3.943838e-50 | -8.615850e-47 |
| Msa0092970 | Msa0234740 | 0.820252 | 7.565646e-53 | -8.615850e-47 |
| Msa0092970 | Msa0247470 | 0.821436 | 4.042745e-53 | -8.615850e-47 |
| Msa0092970 | Msa0264680 | 0.853334 | 2.559358e-61 | -8.615850e-47 |
| Msa0092970 | Msa0273070 | 0.869948 | 2.111226e-66 | -8.615850e-47 |
| Msa0092970 | Msa0302730 | 0.831235 | 1.872332e-55 | -8.615850e-47 |
| Msa0092970 | Msa0306310 | 0.895532 | 8.767052e-76 | -8.615850e-47 |
| Msa0092970 | Msa0316470 | 0.808052 | 3.742424e-50 | -8.615850e-47 |
| Msa0092970 | Msa0324840 | 0.820956 | 5.213546e-53 | -8.615850e-47 |
| Msa0092970 | Msa0335080 | 0.813251 | 2.813581e-51 | -8.615850e-47 |
| Msa0092970 | Msa0345890 | 0.838402 | 2.938038e-57 | -8.615850e-47 |
| Msa0092970 | Msa0345980 | 0.856633 | 2.820017e-62 | -8.615850e-47 |
| Msa0092970 | Msa0393100 | 0.838241 | 3.232331e-57 | -8.615850e-47 |
| Msa0092970 | Msa0397180 | 0.821273 | 4.406889e-53 | -8.615850e-47 |
| Msa0092970 | Msa0443450 | 0.811580 | 6.520844e-51 | -8.615850e-47 |
| Msa0092970 | Msa0471930 | 0.800557 | 1.363196e-48 | -8.615850e-47 |
| Msa0092970 | Msa0476770 | 0.989406 | 5.496305e-178 | -8.615850e-47 |
| Msa0092970 | Msa0488580 | 0.843052 | 1.776040e-58 | -8.615850e-47 |
| Msa0092970 | Msa0497690 | 0.800727 | 1.258242e-48 | -8.615850e-47 |
| Msa0092970 | Msa0497860 | 0.801142 | 1.035060e-48 | -8.615850e-47 |
| Msa0092970 | Msa0516570 | 0.801188 | 1.013135e-48 | -8.615850e-47 |
| Msa0092970 | Msa0521130 | 0.925394 | 1.946460e-90 | -8.615850e-47 |
| Msa0092970 | Msa0534270 | 0.817642 | 2.965697e-52 | -8.615850e-47 |
| Msa0092970 | Msa0556270 | 0.810055 | 1.393790e-50 | -8.615850e-47 |
| Msa0092970 | Msa0576560 | 0.806597 | 7.613478e-50 | -8.615850e-47 |
| Msa0092970 | Msa0590390 | 0.809251 | 2.075507e-50 | -8.615850e-47 |
| Msa0092970 | Msa0610580 | 0.801633 | 8.213361e-49 | -8.615850e-47 |
| Msa0092970 | Msa0650560 | 0.804255 | 2.358293e-49 | -8.615850e-47 |
| Msa0092970 | Msa0662580 | 0.827581 | 1.445450e-54 | -8.615850e-47 |
| Msa0092970 | Msa0693240 | 0.800100 | 1.688312e-48 | -8.615850e-47 |
| Msa0092970 | Msa0717860 | 0.817952 | 2.524746e-52 | -8.615850e-47 |
| Msa0092970 | Msa0740630 | 0.807906 | 4.020160e-50 | -8.615850e-47 |
| Msa0092970 | Msa0753930 | 0.820447 | 6.827647e-53 | -8.615850e-47 |
| Msa0092970 | Msa0758520 | 0.846274 | 2.407622e-59 | -8.615850e-47 |
| Msa0092970 | Msa0758570 | 0.846363 | 2.277373e-59 | -8.615850e-47 |
| Msa0092970 | Msa0804870 | 0.865881 | 4.279029e-65 | -8.615850e-47 |
| Msa0092970 | Msa0807020 | 0.827051 | 1.936390e-54 | -8.615850e-47 |
| Msa0092970 | Msa0820880 | 0.812114 | 4.990318e-51 | -8.615850e-47 |
| Msa0092970 | Msa0829050 | 0.977173 | 2.959709e-143 | -8.615850e-47 |
| Msa0092970 | Msa0832950 | 0.865367 | 6.218778e-65 | -8.615850e-47 |
| Msa0092970 | Msa0838870 | 0.849850 | 2.480692e-60 | -8.615850e-47 |
| Msa0092970 | Msa0848020 | 0.834078 | 3.690798e-56 | -8.615850e-47 |
| Msa0092970 | Msa0859040 | 0.824539 | 7.643002e-54 | -8.615850e-47 |
| Msa0092970 | Msa0881510 | 0.823247 | 1.535399e-53 | -8.615850e-47 |
| Msa0092970 | Msa0945130 | 0.800676 | 1.288984e-48 | -8.615850e-47 |
| Msa0092970 | Msa0965780 | 0.804148 | 2.482441e-49 | -8.615850e-47 |
| Msa0092970 | Msa1000800 | 0.816238 | 6.128656e-52 | -8.615850e-47 |
| Msa0092970 | Msa1025750 | 0.800622 | 1.321754e-48 | -8.615850e-47 |
| Msa0092970 | Msa1026890 | 0.816053 | 6.741658e-52 | -8.615850e-47 |
| Msa0092970 | Msa1027910 | 0.853511 | 2.277294e-61 | -8.615850e-47 |
| Msa0092970 | Msa1030200 | 0.831845 | 1.324793e-55 | -8.615850e-47 |
| Msa0092970 | Msa1030210 | 0.830504 | 2.829578e-55 | -8.615850e-47 |
| Msa0092970 | Msa1069250 | 0.817841 | 2.674986e-52 | -8.615850e-47 |
| Msa0092970 | Msa1084890 | 0.840253 | 9.720786e-58 | -8.615850e-47 |
| Msa0092970 | Msa1102210 | 0.801088 | 1.061750e-48 | -8.615850e-47 |
| Msa0092970 | Msa1120580 | 0.845384 | 4.199914e-59 | -8.615850e-47 |
| Msa0092970 | Msa1131790 | 0.801094 | 1.059051e-48 | -8.615850e-47 |
| Msa0092970 | Msa1132980 | 0.830466 | 2.890306e-55 | -8.615850e-47 |
| Msa0092970 | Msa1157110 | 0.844075 | 9.464894e-59 | -8.615850e-47 |
| Msa0092970 | Msa1184400 | 0.848935 | 4.462329e-60 | -8.615850e-47 |
| Msa0092970 | Msa1225580 | 0.842422 | 2.611828e-58 | -8.615850e-47 |
| Msa0092970 | Msa1307930 | 0.817469 | 3.244552e-52 | -8.615850e-47 |
| Msa0092970 | Msa1355510 | 0.854223 | 1.420530e-61 | -8.615850e-47 |
| Msa0092970 | Msa1356130 | 0.808726 | 2.688279e-50 | -8.615850e-47 |
| Msa0092970 | Msa1369320 | 0.806314 | 8.736994e-50 | -8.615850e-47 |
| Msa0092970 | Msa1369450 | 0.830969 | 2.176772e-55 | -8.615850e-47 |
| Msa0092970 | Msa1395250 | 0.803678 | 3.107987e-49 | -8.615850e-47 |
| Msa0092970 | Msa1398900 | 0.810162 | 1.321699e-50 | -8.615850e-47 |
| Msa0092970 | Msa1405500 | 0.804967 | 1.674834e-49 | -8.615850e-47 |
| Msa0092970 | Msa1422230 | 0.810792 | 9.665898e-51 | -8.615850e-47 |
| Msa0092970 | Msa1433410 | 0.821716 | 3.482981e-53 | -8.615850e-47 |
| Msa0092970 | Msa1435320 | 0.891383 | 4.176918e-74 | -8.615850e-47 |
| Msa0092970 | Msa1443400 | 0.890879 | 6.608296e-74 | -8.615850e-47 |
| Msa0092970 | Msa1447870 | 0.806517 | 7.915120e-50 | -8.615850e-47 |
| Msa0092970 | Msa1448040 | 0.890858 | 6.732148e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092970 | MtrunA17_Chr3g0137271 | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Msa0092970 | MtrunA17_Chr3g0137321 | 92.887 | 478 | 34 | 0 | 1 | 478 | 1 | 478 | 0.0 | 906 |
| Msa0092970 | MtrunA17_Chr3g0137261 | 92.050 | 478 | 38 | 0 | 1 | 478 | 3 | 480 | 0.0 | 870 |
| Msa0092970 | MtrunA17_Chr3g0137341 | 91.632 | 478 | 36 | 2 | 1 | 478 | 1 | 474 | 0.0 | 857 |
| Msa0092970 | MtrunA17_Chr1g0192071 | 91.841 | 478 | 31 | 1 | 1 | 478 | 3 | 472 | 0.0 | 852 |
| Msa0092970 | MtrunA17_Chr1g0186201 | 92.259 | 478 | 33 | 1 | 1 | 478 | 1 | 474 | 0.0 | 848 |
| Msa0092970 | MtrunA17_Chr1g0212211 | 75.564 | 532 | 73 | 5 | 1 | 478 | 1 | 529 | 0.0 | 764 |
| Msa0092970 | MtrunA17_Chr8g0364981 | 83.575 | 414 | 42 | 4 | 52 | 464 | 1 | 389 | 0.0 | 618 |
| Msa0092970 | MtrunA17_Chr1g0184991 | 93.117 | 247 | 17 | 0 | 1 | 247 | 1 | 247 | 4.67e-170 | 478 |
| Msa0092970 | MtrunA17_Chr3g0137301 | 91.710 | 193 | 16 | 0 | 285 | 477 | 1 | 193 | 2.25e-123 | 357 |
| Msa0092970 | MtrunA17_Chr1g0184981 | 89.691 | 194 | 17 | 1 | 285 | 478 | 1 | 191 | 6.43e-123 | 356 |
| Msa0092970 | MtrunA17_Chr3g0137311 | 87.407 | 135 | 17 | 0 | 1 | 135 | 19 | 153 | 8.66e-81 | 247 |
| Msa0092970 | MtrunA17_Chr3g0110461 | 83.333 | 42 | 7 | 0 | 113 | 154 | 1 | 42 | 2.55e-16 | 72.8 |
| Msa0092970 | MtrunA17_Chr8g0364991 | 82.051 | 39 | 7 | 0 | 1 | 39 | 1 | 39 | 6.18e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092970 | AT5G25260.1 | 74.419 | 473 | 109 | 2 | 1 | 473 | 1 | 461 | 0.0 | 721 |
| Msa0092970 | AT5G25250.1 | 74.841 | 473 | 105 | 2 | 1 | 473 | 1 | 459 | 0.0 | 719 |
| Msa0092970 | AT5G64870.1 | 70.763 | 472 | 127 | 1 | 2 | 473 | 3 | 463 | 0.0 | 647 |
Find 122 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAATATTTCTCATATT+TGG | 0.034420 | 1_2:+75779189 | Msa0092970:CDS |
| CACTAGTCTTTCAGACTTTC+AGG | 0.104707 | 1_2:+75781027 | Msa0092970:three_prime_UTR |
| GTGAGATTGGTTCGAAATTA+AGG | 0.141080 | 1_2:+75779278 | Msa0092970:CDS |
| CTGCTTCCATTTGTGTCTTT+TGG | 0.142752 | 1_2:-75779213 | None:intergenic |
| GAGTTTAAACAAGAAGTATT+TGG | 0.198991 | 1_2:+75779088 | Msa0092970:CDS |
| ACTTCAAAGGTGTAATTTAC+AGG | 0.279006 | 1_2:-75778842 | None:intergenic |
| CATGAATATTTCTCATATTT+GGG | 0.285753 | 1_2:+75779190 | Msa0092970:CDS |
| AGGGATTACTTAATGATAAA+TGG | 0.291040 | 1_2:+75780700 | Msa0092970:CDS |
| CTGCTAAAGCCGTAGCTCTA+AGG | 0.291473 | 1_2:+75779518 | Msa0092970:CDS |
| ATATATATATCGACAATAAA+AGG | 0.294040 | 1_2:-75780994 | None:intergenic |
| AACAAGTTCCTTAACATGAT+TGG | 0.309318 | 1_2:-75778990 | None:intergenic |
| AGTTTAAACAAGAAGTATTT+GGG | 0.333241 | 1_2:+75779089 | Msa0092970:CDS |
| TCACAATACCTTGTGATAAC+TGG | 0.348490 | 1_2:+75778740 | Msa0092970:CDS |
| AGAGCTATATGCAAAGAAAA+AGG | 0.353826 | 1_2:+75780588 | Msa0092970:CDS |
| ATCATGAGGGGAAATTAGTT+TGG | 0.369987 | 1_2:-75778960 | None:intergenic |
| TGTAAATCAATAAACCGAAT+TGG | 0.376492 | 1_2:-75779132 | None:intergenic |
| GTAACATTCCCGTTTGTTCA+TGG | 0.378374 | 1_2:-75780897 | None:intergenic |
| AAGATTAGCATTTGGACTAA+TGG | 0.384982 | 1_2:+75780781 | Msa0092970:CDS |
| TATAGGTACAAGAAGCAAAC+TGG | 0.387176 | 1_2:+75780446 | Msa0092970:intron |
| TGAGATTGGTTCGAAATTAA+GGG | 0.391205 | 1_2:+75779279 | Msa0092970:CDS |
| TTAGTCCAAATGCTAATCTT+AGG | 0.400981 | 1_2:-75780778 | None:intergenic |
| CAACTTGAACTAAACCAATT+CGG | 0.410262 | 1_2:+75779118 | Msa0092970:CDS |
| GGCTGAGGCTAATTCTGAAT+TGG | 0.413100 | 1_2:+75779444 | Msa0092970:CDS |
| TTGAGCCTAAGATTAGCATT+TGG | 0.413132 | 1_2:+75780773 | Msa0092970:CDS |
| CGGTCCTCGTGTGGATGATA+AGG | 0.423356 | 1_2:+75778919 | Msa0092970:CDS |
| ACTAATGGTGGTGATAATAG+TGG | 0.431222 | 1_2:+75780796 | Msa0092970:CDS |
| GAAGAAAGCGGCTTGGACTA+AGG | 0.439534 | 1_2:+75779471 | Msa0092970:CDS |
| TACCTTGTGATAACTGGAAT+CGG | 0.450729 | 1_2:+75778746 | Msa0092970:CDS |
| TAAACTCTCCAATCATGTTA+AGG | 0.453562 | 1_2:+75778982 | Msa0092970:CDS |
| AATGTTACCACCTGCTTGGA+TGG | 0.462701 | 1_2:+75780912 | Msa0092970:CDS |
| AAGACAGCGGGGAGAACAAA+AGG | 0.470694 | 1_2:-75778890 | None:intergenic |
| CATGTTAAGGAACTTGTTCA+AGG | 0.472007 | 1_2:+75778995 | Msa0092970:CDS |
| GCTAAGATGAAAGGTGAGAT+TGG | 0.475874 | 1_2:+75779265 | Msa0092970:CDS |
| CTCCCCGCTGTCTTCACTAT+CGG | 0.478414 | 1_2:+75778899 | Msa0092970:CDS |
| TAAGACTGTCCATGAACAAA+CGG | 0.483381 | 1_2:+75780888 | Msa0092970:CDS |
| GGGAATAACTGAAGGTGCCA+TGG | 0.487818 | 1_2:+75780819 | Msa0092970:CDS |
| GAAACAACTACACAGCTGTA+AGG | 0.490449 | 1_2:+75780680 | Msa0092970:CDS |
| CTCAAGTCCGCGTACCGCCT+CGG | 0.491620 | 1_2:-75780755 | None:intergenic |
| TTTGGGCCAAAAGACACAAA+TGG | 0.502028 | 1_2:+75779207 | Msa0092970:CDS |
| CGGGAATGTTACCACCTGCT+TGG | 0.507160 | 1_2:+75780908 | Msa0092970:CDS |
| TGCTTCAATGACAATGGAAG+AGG | 0.507417 | 1_2:+75779048 | Msa0092970:CDS |
| CTCAAAATCAACCATGTACA+AGG | 0.508124 | 1_2:+75778706 | None:intergenic |
| CTAAGGGATGCTGAGTTACA+AGG | 0.508698 | 1_2:+75779535 | Msa0092970:CDS |
| GAGAGAAGCTGAAGTGGCTG+AGG | 0.509792 | 1_2:+75779429 | Msa0092970:CDS |
| CTTGTTCAAGGAATCATTGA+AGG | 0.510892 | 1_2:+75779007 | Msa0092970:CDS |
| TTGGACTAAGGCGGCTCAAG+TGG | 0.511474 | 1_2:+75779483 | Msa0092970:CDS |
| GAATCAGAGAGAAGCTGAAG+TGG | 0.511635 | 1_2:+75779423 | Msa0092970:CDS |
| GTTATTGCGATGCAGAGGGC+TGG | 0.513050 | 1_2:+75779349 | Msa0092970:CDS |
| GGACCGATAGTGAAGACAGC+GGG | 0.513792 | 1_2:-75778902 | None:intergenic |
| AAGACTGTCCATGAACAAAC+GGG | 0.515531 | 1_2:+75780889 | Msa0092970:CDS |
| GGCTCAAGTGGCCGAAGTTG+AGG | 0.521394 | 1_2:+75779495 | Msa0092970:CDS |
| GCTGGAGAGGGCGACAAGGA+GGG | 0.521545 | 1_2:+75779367 | Msa0092970:CDS |
| GAAGACGGAGTAGGATTGAC+CGG | 0.524836 | 1_2:-75778810 | None:intergenic |
| GAGGGCTGGAGAGGGCGACA+AGG | 0.525696 | 1_2:+75779363 | Msa0092970:CDS |
| GTAACACTTGGGAATGCTCA+AGG | 0.527999 | 1_2:+75780625 | Msa0092970:CDS |
| TGCTAAAGCCGTAGCTCTAA+GGG | 0.534229 | 1_2:+75779519 | Msa0092970:CDS |
| GGAATAACTGAAGGTGCCAT+GGG | 0.534697 | 1_2:+75780820 | Msa0092970:CDS |
| AGCAACTTCTTTCATACCCA+TGG | 0.534773 | 1_2:-75780836 | None:intergenic |
| GGCAAGACTCCCATCCAAGC+AGG | 0.534806 | 1_2:-75780922 | None:intergenic |
| GCAGAGGGAATTGTAACACT+TGG | 0.536418 | 1_2:+75780613 | Msa0092970:CDS |
| GGCTGGAGAGGGCGACAAGG+AGG | 0.536888 | 1_2:+75779366 | Msa0092970:CDS |
| GCTCATTGCTTGAACTTCAA+AGG | 0.540493 | 1_2:-75778855 | None:intergenic |
| GCGATGCAGAGGGCTGGAGA+GGG | 0.540981 | 1_2:+75779355 | Msa0092970:CDS |
| CTCAGCATCCCTTAGAGCTA+CGG | 0.547484 | 1_2:-75779527 | None:intergenic |
| TGCGATGCAGAGGGCTGGAG+AGG | 0.550159 | 1_2:+75779354 | Msa0092970:CDS |
| ATTGAACGCTAGCTTTGCTA+AGG | 0.553614 | 1_2:-75779612 | None:intergenic |
| TAAAGCTTGCAAAGAAAGCA+TGG | 0.553863 | 1_2:+75778780 | Msa0092970:CDS |
| TTAGTTTGGCGTATTTGAGA+AGG | 0.553890 | 1_2:-75778946 | None:intergenic |
| TAAAGTGAGGACTGAAGTGA+AGG | 0.556664 | 1_2:+75779393 | Msa0092970:CDS |
| TGGCTAAGAAGAAAGCGGCT+TGG | 0.558254 | 1_2:+75779464 | Msa0092970:CDS |
| AAACAGTTAGTTGATGTGCC+AGG | 0.562976 | 1_2:+75779166 | Msa0092970:CDS |
| TTTGTATGAGAAGAAGGCAG+AGG | 0.567950 | 1_2:+75780504 | Msa0092970:CDS |
| ATGTTACCACCTGCTTGGAT+GGG | 0.569893 | 1_2:+75780913 | Msa0092970:CDS |
| GGAGCTGTACAAGAAACAAA+AGG | 0.571542 | 1_2:+75780468 | Msa0092970:CDS |
| TCATGGACAGTCTTAAACAA+AGG | 0.574375 | 1_2:-75780880 | None:intergenic |
| TGGAAGCAGCGAATCAAGCA+AGG | 0.574713 | 1_2:+75779227 | Msa0092970:CDS |
| CTTCACTATCGGTCCTCGTG+TGG | 0.576587 | 1_2:+75778910 | Msa0092970:CDS |
| TGAGAGGTCGAAGACGGAGT+AGG | 0.579128 | 1_2:-75778819 | None:intergenic |
| ATGGGTATGAAAGAAGTTGC+TGG | 0.579940 | 1_2:+75780838 | Msa0092970:CDS |
| TAACACTTGGGAATGCTCAA+GGG | 0.580610 | 1_2:+75780626 | Msa0092970:CDS |
| CCTCGCTGCTTCAATGACAA+TGG | 0.585018 | 1_2:+75779042 | Msa0092970:CDS |
| AAACAACTACACAGCTGTAA+GGG | 0.585417 | 1_2:+75780681 | Msa0092970:CDS |
| CTAATGGTGGTGATAATAGT+GGG | 0.587233 | 1_2:+75780797 | Msa0092970:CDS |
| GGCTTTAGCAGCCTCAACTT+CGG | 0.588855 | 1_2:-75779506 | None:intergenic |
| ATTAGCATTTGGACTAATGG+TGG | 0.590526 | 1_2:+75780784 | Msa0092970:CDS |
| GATTGGAGAGTTTATCATGA+GGG | 0.592992 | 1_2:-75778973 | None:intergenic |
| AGTGCACTTCTGAATGCACT+TGG | 0.593608 | 1_2:+75780658 | Msa0092970:CDS |
| CAAAGGTTATTGCGATGCAG+AGG | 0.594400 | 1_2:+75779344 | Msa0092970:CDS |
| TTCCGATTCCAGTTATCACA+AGG | 0.603437 | 1_2:-75778748 | None:intergenic |
| GTATCAGAAGCTAAGATGAA+AGG | 0.607033 | 1_2:+75779256 | Msa0092970:CDS |
| AGTTACAAGGTGAAGTTGAG+AGG | 0.609202 | 1_2:+75779548 | Msa0092970:CDS |
| ATTGGAGAGTTTATCATGAG+GGG | 0.615848 | 1_2:-75778972 | None:intergenic |
| TGAATTGGCTAAGAAGAAAG+CGG | 0.615999 | 1_2:+75779459 | Msa0092970:CDS |
| CAGAGGGAATTGTAACACTT+GGG | 0.616845 | 1_2:+75780614 | Msa0092970:CDS |
| ATAGGTACAAGAAGCAAACT+GGG | 0.617338 | 1_2:+75780447 | Msa0092970:intron |
| TACAGGTGAGAGGTCGAAGA+CGG | 0.620713 | 1_2:-75778825 | None:intergenic |
| AAAGGTTATTGCGATGCAGA+GGG | 0.625617 | 1_2:+75779345 | Msa0092970:CDS |
| GTACAAGAAACAAAAGGAGG+CGG | 0.626062 | 1_2:+75780474 | Msa0092970:CDS |
| AACACTTGGGAATGCTCAAG+GGG | 0.627744 | 1_2:+75780627 | Msa0092970:CDS |
| AATGGTGGTGATAATAGTGG+GGG | 0.629638 | 1_2:+75780799 | Msa0092970:CDS |
| AGGTGTAATTTACAGGTGAG+AGG | 0.630097 | 1_2:-75778835 | None:intergenic |
| ATTGGTTCGAAATTAAGGGA+AGG | 0.631020 | 1_2:+75779283 | Msa0092970:CDS |
| TAATGGTGGTGATAATAGTG+GGG | 0.634711 | 1_2:+75780798 | Msa0092970:CDS |
| GATTACTTAATGATAAATGG+TGG | 0.642965 | 1_2:+75780703 | Msa0092970:CDS |
| GATTGCTAAGATTAATGCCG+AGG | 0.643593 | 1_2:+75780738 | Msa0092970:CDS |
| TGGACAGTCTTAAACAAAGG+TGG | 0.647859 | 1_2:-75780877 | None:intergenic |
| TATGAGAAATATTCATGACC+TGG | 0.653740 | 1_2:-75779184 | None:intergenic |
| AAGACGGAGTAGGATTGACC+GGG | 0.657113 | 1_2:-75778809 | None:intergenic |
| TGCTAAGATTAATGCCGAGG+CGG | 0.661554 | 1_2:+75780741 | Msa0092970:CDS |
| TAGCGTTCAATATGAAACCA+AGG | 0.661629 | 1_2:+75779624 | Msa0092970:CDS |
| AAGAAAGCATGGATTCTACC+CGG | 0.664070 | 1_2:+75778791 | Msa0092970:CDS |
| GGAAGCAGCGAATCAAGCAA+GGG | 0.666342 | 1_2:+75779228 | Msa0092970:CDS |
| TGATTGGAGAGTTTATCATG+AGG | 0.672105 | 1_2:-75778974 | None:intergenic |
| AAGACTCCCATCCAAGCAGG+TGG | 0.679480 | 1_2:-75780919 | None:intergenic |
| ATTAATGCCGAGGCGGTACG+CGG | 0.680968 | 1_2:+75780748 | Msa0092970:CDS |
| ACAAGGAGGGAATTAAAGTG+AGG | 0.693697 | 1_2:+75779380 | Msa0092970:CDS |
| CTTTCCTTATCATCCACACG+AGG | 0.701431 | 1_2:-75778923 | None:intergenic |
| CCATTGTCATTGAAGCAGCG+AGG | 0.707893 | 1_2:-75779042 | None:intergenic |
| GACCGATAGTGAAGACAGCG+GGG | 0.713902 | 1_2:-75778901 | None:intergenic |
| GCTGTACAAGAAACAAAAGG+AGG | 0.725038 | 1_2:+75780471 | Msa0092970:CDS |
| GAAAGCGGCTTGGACTAAGG+CGG | 0.747622 | 1_2:+75779474 | Msa0092970:CDS |
| AGGACCGATAGTGAAGACAG+CGG | 0.753084 | 1_2:-75778903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTGCATTTTTTTAAATAAT+TGG | + | chr1_2:75780077-75780096 | Msa0092970:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | - | chr1_2:75780347-75780366 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | + | chr1_2:75780349-75780368 | Msa0092970:intron | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | - | chr1_2:75780997-75781016 | None:intergenic | 15.0% |
| !!! | GTTGCATTTTTTTAAATAAT+TGG | + | chr1_2:75780077-75780096 | Msa0092970:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | - | chr1_2:75780347-75780366 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | + | chr1_2:75780349-75780368 | Msa0092970:intron | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | - | chr1_2:75780997-75781016 | None:intergenic | 15.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | + | chr1_2:75779089-75779108 | Msa0092970:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | + | chr1_2:75779189-75779208 | Msa0092970:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | + | chr1_2:75779190-75779209 | Msa0092970:CDS | 20.0% |
| !!! | TGATTATTGATTCTGTTATA+TGG | + | chr1_2:75780044-75780063 | Msa0092970:intron | 20.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | + | chr1_2:75779089-75779108 | Msa0092970:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | + | chr1_2:75779189-75779208 | Msa0092970:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | + | chr1_2:75779190-75779209 | Msa0092970:CDS | 20.0% |
| !!! | TGATTATTGATTCTGTTATA+TGG | + | chr1_2:75780044-75780063 | Msa0092970:intron | 20.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | + | chr1_2:75779088-75779107 | Msa0092970:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | - | chr1_2:75779135-75779154 | None:intergenic | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | + | chr1_2:75779779-75779798 | Msa0092970:intron | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+GGG | - | chr1_2:75779905-75779924 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | - | chr1_2:75780133-75780152 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | + | chr1_2:75780301-75780320 | Msa0092970:intron | 25.0% |
| ! | ATTTATTTACTAGGCCTAAT+AGG | - | chr1_2:75780366-75780385 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | + | chr1_2:75780419-75780438 | Msa0092970:intron | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | + | chr1_2:75780700-75780719 | Msa0092970:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | + | chr1_2:75780703-75780722 | Msa0092970:CDS | 25.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | + | chr1_2:75779088-75779107 | Msa0092970:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | - | chr1_2:75779135-75779154 | None:intergenic | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | + | chr1_2:75779779-75779798 | Msa0092970:intron | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+GGG | - | chr1_2:75779905-75779924 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | - | chr1_2:75780133-75780152 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | + | chr1_2:75780301-75780320 | Msa0092970:intron | 25.0% |
| ! | ATTTATTTACTAGGCCTAAT+AGG | - | chr1_2:75780366-75780385 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | + | chr1_2:75780419-75780438 | Msa0092970:intron | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | + | chr1_2:75780700-75780719 | Msa0092970:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | + | chr1_2:75780703-75780722 | Msa0092970:CDS | 25.0% |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | - | chr1_2:75778845-75778864 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | + | chr1_2:75778982-75779001 | Msa0092970:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | - | chr1_2:75778993-75779012 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | + | chr1_2:75779118-75779137 | Msa0092970:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | - | chr1_2:75779187-75779206 | None:intergenic | 30.0% | |
| !! | TGAGATTGGTTCGAAATTAA+GGG | + | chr1_2:75779279-75779298 | Msa0092970:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | + | chr1_2:75779327-75779346 | Msa0092970:CDS | 30.0% | |
| CATTTGGTTAAACCTTAAAG+GGG | - | chr1_2:75779904-75779923 | None:intergenic | 30.0% | |
| CTCATTTGGTTAAACCTTAA+AGG | - | chr1_2:75779906-75779925 | None:intergenic | 30.0% | |
| ! | TCAACACTATTTTACAACCT+TGG | + | chr1_2:75780152-75780171 | Msa0092970:intron | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | + | chr1_2:75780159-75780178 | Msa0092970:intron | 30.0% |
| TACTATAATGAGATCACAGT+TGG | + | chr1_2:75780228-75780247 | Msa0092970:intron | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | - | chr1_2:75780283-75780302 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | - | chr1_2:75780284-75780303 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | + | chr1_2:75780429-75780448 | Msa0092970:intron | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | + | chr1_2:75780588-75780607 | Msa0092970:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | - | chr1_2:75780781-75780800 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | + | chr1_2:75780781-75780800 | Msa0092970:CDS | 30.0% | |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | - | chr1_2:75778845-75778864 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | + | chr1_2:75778982-75779001 | Msa0092970:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | - | chr1_2:75778993-75779012 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | + | chr1_2:75779118-75779137 | Msa0092970:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | - | chr1_2:75779187-75779206 | None:intergenic | 30.0% | |
| !! | TGAGATTGGTTCGAAATTAA+GGG | + | chr1_2:75779279-75779298 | Msa0092970:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | + | chr1_2:75779327-75779346 | Msa0092970:CDS | 30.0% | |
| CATTTGGTTAAACCTTAAAG+GGG | - | chr1_2:75779904-75779923 | None:intergenic | 30.0% | |
| CTCATTTGGTTAAACCTTAA+AGG | - | chr1_2:75779906-75779925 | None:intergenic | 30.0% | |
| ! | TCAACACTATTTTACAACCT+TGG | + | chr1_2:75780152-75780171 | Msa0092970:intron | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | + | chr1_2:75780159-75780178 | Msa0092970:intron | 30.0% |
| TACTATAATGAGATCACAGT+TGG | + | chr1_2:75780228-75780247 | Msa0092970:intron | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | - | chr1_2:75780283-75780302 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | - | chr1_2:75780284-75780303 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | + | chr1_2:75780429-75780448 | Msa0092970:intron | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | + | chr1_2:75780588-75780607 | Msa0092970:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | - | chr1_2:75780781-75780800 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | + | chr1_2:75780781-75780800 | Msa0092970:CDS | 30.0% | |
| TCACAATACCTTGTGATAAC+TGG | + | chr1_2:75778740-75778759 | Msa0092970:CDS | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | + | chr1_2:75778746-75778765 | Msa0092970:CDS | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | + | chr1_2:75778780-75778799 | Msa0092970:CDS | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | - | chr1_2:75778949-75778968 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | - | chr1_2:75778963-75778982 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | - | chr1_2:75778975-75778994 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | - | chr1_2:75778976-75778995 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | - | chr1_2:75778977-75778996 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | + | chr1_2:75778995-75779014 | Msa0092970:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | + | chr1_2:75779007-75779026 | Msa0092970:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | + | chr1_2:75779256-75779275 | Msa0092970:CDS | 35.0% | |
| !! | GTGAGATTGGTTCGAAATTA+AGG | + | chr1_2:75779278-75779297 | Msa0092970:CDS | 35.0% |
| !! | ATTGGTTCGAAATTAAGGGA+AGG | + | chr1_2:75779283-75779302 | Msa0092970:CDS | 35.0% |
| TGAATTGGCTAAGAAGAAAG+CGG | + | chr1_2:75779459-75779478 | Msa0092970:CDS | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | + | chr1_2:75779624-75779643 | Msa0092970:CDS | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | - | chr1_2:75779644-75779663 | None:intergenic | 35.0% | |
| !! | GTTTTAAACTCTCCCCTTTA+AGG | + | chr1_2:75779889-75779908 | Msa0092970:intron | 35.0% |
| ACTCATGATCAATGGACAAT+GGG | + | chr1_2:75779930-75779949 | Msa0092970:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | - | chr1_2:75780172-75780191 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | - | chr1_2:75780282-75780301 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | + | chr1_2:75780423-75780442 | Msa0092970:intron | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | + | chr1_2:75780446-75780465 | Msa0092970:intron | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | + | chr1_2:75780447-75780466 | Msa0092970:intron | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | + | chr1_2:75780498-75780517 | Msa0092970:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | + | chr1_2:75780591-75780610 | Msa0092970:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | + | chr1_2:75780681-75780700 | Msa0092970:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | + | chr1_2:75780773-75780792 | Msa0092970:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | + | chr1_2:75780784-75780803 | Msa0092970:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | + | chr1_2:75780796-75780815 | Msa0092970:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | + | chr1_2:75780797-75780816 | Msa0092970:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | + | chr1_2:75780798-75780817 | Msa0092970:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | - | chr1_2:75780883-75780902 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | + | chr1_2:75780888-75780907 | Msa0092970:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | - | chr1_2:75780946-75780965 | None:intergenic | 35.0% |
| TCACAATACCTTGTGATAAC+TGG | + | chr1_2:75778740-75778759 | Msa0092970:CDS | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | + | chr1_2:75778746-75778765 | Msa0092970:CDS | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | + | chr1_2:75778780-75778799 | Msa0092970:CDS | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | - | chr1_2:75778949-75778968 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | - | chr1_2:75778963-75778982 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | - | chr1_2:75778975-75778994 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | - | chr1_2:75778976-75778995 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | - | chr1_2:75778977-75778996 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | + | chr1_2:75778995-75779014 | Msa0092970:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | + | chr1_2:75779007-75779026 | Msa0092970:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | + | chr1_2:75779256-75779275 | Msa0092970:CDS | 35.0% | |
| !! | GTGAGATTGGTTCGAAATTA+AGG | + | chr1_2:75779278-75779297 | Msa0092970:CDS | 35.0% |
| !! | ATTGGTTCGAAATTAAGGGA+AGG | + | chr1_2:75779283-75779302 | Msa0092970:CDS | 35.0% |
| TGAATTGGCTAAGAAGAAAG+CGG | + | chr1_2:75779459-75779478 | Msa0092970:CDS | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | + | chr1_2:75779624-75779643 | Msa0092970:CDS | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | - | chr1_2:75779644-75779663 | None:intergenic | 35.0% | |
| !! | GTTTTAAACTCTCCCCTTTA+AGG | + | chr1_2:75779889-75779908 | Msa0092970:intron | 35.0% |
| ACTCATGATCAATGGACAAT+GGG | + | chr1_2:75779930-75779949 | Msa0092970:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | - | chr1_2:75780172-75780191 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | - | chr1_2:75780282-75780301 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | + | chr1_2:75780423-75780442 | Msa0092970:intron | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | + | chr1_2:75780446-75780465 | Msa0092970:intron | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | + | chr1_2:75780447-75780466 | Msa0092970:intron | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | + | chr1_2:75780498-75780517 | Msa0092970:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | + | chr1_2:75780591-75780610 | Msa0092970:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | + | chr1_2:75780681-75780700 | Msa0092970:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | + | chr1_2:75780773-75780792 | Msa0092970:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | + | chr1_2:75780784-75780803 | Msa0092970:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | + | chr1_2:75780796-75780815 | Msa0092970:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | + | chr1_2:75780797-75780816 | Msa0092970:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | + | chr1_2:75780798-75780817 | Msa0092970:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | - | chr1_2:75780883-75780902 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | + | chr1_2:75780888-75780907 | Msa0092970:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | - | chr1_2:75780946-75780965 | None:intergenic | 35.0% |
| TTCCGATTCCAGTTATCACA+AGG | - | chr1_2:75778751-75778770 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | + | chr1_2:75778791-75778810 | Msa0092970:CDS | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | - | chr1_2:75778838-75778857 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | - | chr1_2:75778858-75778877 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | + | chr1_2:75779048-75779067 | Msa0092970:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | + | chr1_2:75779058-75779077 | Msa0092970:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | + | chr1_2:75779166-75779185 | Msa0092970:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | + | chr1_2:75779207-75779226 | Msa0092970:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | - | chr1_2:75779216-75779235 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | + | chr1_2:75779265-75779284 | Msa0092970:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | + | chr1_2:75779345-75779364 | Msa0092970:CDS | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | + | chr1_2:75779380-75779399 | Msa0092970:CDS | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | + | chr1_2:75779393-75779412 | Msa0092970:CDS | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | + | chr1_2:75779548-75779567 | Msa0092970:CDS | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | - | chr1_2:75779615-75779634 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | - | chr1_2:75779920-75779939 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | + | chr1_2:75779922-75779941 | Msa0092970:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | + | chr1_2:75779929-75779948 | Msa0092970:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | - | chr1_2:75780281-75780300 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | + | chr1_2:75780468-75780487 | Msa0092970:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | + | chr1_2:75780471-75780490 | Msa0092970:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | + | chr1_2:75780474-75780493 | Msa0092970:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | + | chr1_2:75780504-75780523 | Msa0092970:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | + | chr1_2:75780614-75780633 | Msa0092970:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | + | chr1_2:75780626-75780645 | Msa0092970:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | + | chr1_2:75780680-75780699 | Msa0092970:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | + | chr1_2:75780738-75780757 | Msa0092970:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | + | chr1_2:75780799-75780818 | Msa0092970:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | + | chr1_2:75780811-75780830 | Msa0092970:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | - | chr1_2:75780839-75780858 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | + | chr1_2:75780838-75780857 | Msa0092970:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | - | chr1_2:75780880-75780899 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | + | chr1_2:75780889-75780908 | Msa0092970:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | - | chr1_2:75780900-75780919 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | + | chr1_2:75780942-75780961 | Msa0092970:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | + | chr1_2:75781027-75781046 | Msa0092970:three_prime_UTR | 40.0% |
| TTCCGATTCCAGTTATCACA+AGG | - | chr1_2:75778751-75778770 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | + | chr1_2:75778791-75778810 | Msa0092970:CDS | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | - | chr1_2:75778838-75778857 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | - | chr1_2:75778858-75778877 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | + | chr1_2:75779048-75779067 | Msa0092970:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | + | chr1_2:75779058-75779077 | Msa0092970:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | + | chr1_2:75779166-75779185 | Msa0092970:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | + | chr1_2:75779207-75779226 | Msa0092970:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | - | chr1_2:75779216-75779235 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | + | chr1_2:75779265-75779284 | Msa0092970:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | + | chr1_2:75779345-75779364 | Msa0092970:CDS | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | + | chr1_2:75779380-75779399 | Msa0092970:CDS | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | + | chr1_2:75779393-75779412 | Msa0092970:CDS | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | + | chr1_2:75779548-75779567 | Msa0092970:CDS | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | - | chr1_2:75779615-75779634 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | - | chr1_2:75779920-75779939 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | + | chr1_2:75779922-75779941 | Msa0092970:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | + | chr1_2:75779929-75779948 | Msa0092970:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | - | chr1_2:75780281-75780300 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | + | chr1_2:75780468-75780487 | Msa0092970:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | + | chr1_2:75780471-75780490 | Msa0092970:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | + | chr1_2:75780474-75780493 | Msa0092970:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | + | chr1_2:75780504-75780523 | Msa0092970:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | + | chr1_2:75780614-75780633 | Msa0092970:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | + | chr1_2:75780626-75780645 | Msa0092970:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | + | chr1_2:75780680-75780699 | Msa0092970:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | + | chr1_2:75780738-75780757 | Msa0092970:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | + | chr1_2:75780799-75780818 | Msa0092970:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | + | chr1_2:75780811-75780830 | Msa0092970:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | - | chr1_2:75780839-75780858 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | + | chr1_2:75780838-75780857 | Msa0092970:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | - | chr1_2:75780880-75780899 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | + | chr1_2:75780889-75780908 | Msa0092970:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | - | chr1_2:75780900-75780919 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | + | chr1_2:75780942-75780961 | Msa0092970:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | + | chr1_2:75781027-75781046 | Msa0092970:three_prime_UTR | 40.0% |
| CTTTCCTTATCATCCACACG+AGG | - | chr1_2:75778926-75778945 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | + | chr1_2:75779344-75779363 | Msa0092970:CDS | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | + | chr1_2:75779423-75779442 | Msa0092970:CDS | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | + | chr1_2:75779444-75779463 | Msa0092970:CDS | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | + | chr1_2:75779519-75779538 | Msa0092970:CDS | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | + | chr1_2:75779535-75779554 | Msa0092970:CDS | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | + | chr1_2:75780597-75780616 | Msa0092970:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | + | chr1_2:75780598-75780617 | Msa0092970:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | + | chr1_2:75780613-75780632 | Msa0092970:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | + | chr1_2:75780625-75780644 | Msa0092970:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | + | chr1_2:75780627-75780646 | Msa0092970:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | + | chr1_2:75780658-75780677 | Msa0092970:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | + | chr1_2:75780741-75780760 | Msa0092970:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | + | chr1_2:75780820-75780839 | Msa0092970:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | + | chr1_2:75780912-75780931 | Msa0092970:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | + | chr1_2:75780913-75780932 | Msa0092970:CDS | 45.0% | |
| CTTTCCTTATCATCCACACG+AGG | - | chr1_2:75778926-75778945 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | + | chr1_2:75779344-75779363 | Msa0092970:CDS | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | + | chr1_2:75779423-75779442 | Msa0092970:CDS | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | + | chr1_2:75779444-75779463 | Msa0092970:CDS | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | + | chr1_2:75779519-75779538 | Msa0092970:CDS | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | + | chr1_2:75779535-75779554 | Msa0092970:CDS | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | + | chr1_2:75780597-75780616 | Msa0092970:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | + | chr1_2:75780598-75780617 | Msa0092970:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | + | chr1_2:75780613-75780632 | Msa0092970:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | + | chr1_2:75780625-75780644 | Msa0092970:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | + | chr1_2:75780627-75780646 | Msa0092970:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | + | chr1_2:75780658-75780677 | Msa0092970:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | + | chr1_2:75780741-75780760 | Msa0092970:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | + | chr1_2:75780820-75780839 | Msa0092970:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | + | chr1_2:75780912-75780931 | Msa0092970:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | + | chr1_2:75780913-75780932 | Msa0092970:CDS | 45.0% | |
| !!! | ATAAAAGATTAATATTTTTA+AGG | + | chr1_2:75779955-75779974 | Msa0092970:intron | 5.0% |
| !! | ATATATATAATTTATTTACT+AGG | - | chr1_2:75780375-75780394 | None:intergenic | 5.0% |
| !!! | ATAAAAGATTAATATTTTTA+AGG | + | chr1_2:75779955-75779974 | Msa0092970:intron | 5.0% |
| !! | ATATATATAATTTATTTACT+AGG | - | chr1_2:75780375-75780394 | None:intergenic | 5.0% |
| AAGACGGAGTAGGATTGACC+GGG | - | chr1_2:75778812-75778831 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | - | chr1_2:75778813-75778832 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | - | chr1_2:75778828-75778847 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | - | chr1_2:75778893-75778912 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | - | chr1_2:75778906-75778925 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | - | chr1_2:75779045-75779064 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | + | chr1_2:75779042-75779061 | Msa0092970:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | + | chr1_2:75779227-75779246 | Msa0092970:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | + | chr1_2:75779228-75779247 | Msa0092970:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | + | chr1_2:75779464-75779483 | Msa0092970:CDS | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | + | chr1_2:75779471-75779490 | Msa0092970:CDS | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | - | chr1_2:75779509-75779528 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | + | chr1_2:75779518-75779537 | Msa0092970:CDS | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | - | chr1_2:75779530-75779549 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | - | chr1_2:75780267-75780286 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | + | chr1_2:75780819-75780838 | Msa0092970:CDS | 50.0% |
| AAGACGGAGTAGGATTGACC+GGG | - | chr1_2:75778812-75778831 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | - | chr1_2:75778813-75778832 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | - | chr1_2:75778828-75778847 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | - | chr1_2:75778893-75778912 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | - | chr1_2:75778906-75778925 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | - | chr1_2:75779045-75779064 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | + | chr1_2:75779042-75779061 | Msa0092970:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | + | chr1_2:75779227-75779246 | Msa0092970:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | + | chr1_2:75779228-75779247 | Msa0092970:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | + | chr1_2:75779464-75779483 | Msa0092970:CDS | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | + | chr1_2:75779471-75779490 | Msa0092970:CDS | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | - | chr1_2:75779509-75779528 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | + | chr1_2:75779518-75779537 | Msa0092970:CDS | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | - | chr1_2:75779530-75779549 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | - | chr1_2:75780267-75780286 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | + | chr1_2:75780819-75780838 | Msa0092970:CDS | 50.0% |
| TGAGAGGTCGAAGACGGAGT+AGG | - | chr1_2:75778822-75778841 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | + | chr1_2:75778899-75778918 | Msa0092970:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | - | chr1_2:75778904-75778923 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | - | chr1_2:75778905-75778924 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | + | chr1_2:75778910-75778929 | Msa0092970:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | + | chr1_2:75778919-75778938 | Msa0092970:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | + | chr1_2:75779349-75779368 | Msa0092970:CDS | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | + | chr1_2:75779429-75779448 | Msa0092970:CDS | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | + | chr1_2:75779474-75779493 | Msa0092970:CDS | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | + | chr1_2:75779483-75779502 | Msa0092970:CDS | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | - | chr1_2:75780268-75780287 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | + | chr1_2:75780748-75780767 | Msa0092970:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | + | chr1_2:75780908-75780927 | Msa0092970:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | - | chr1_2:75780922-75780941 | None:intergenic | 55.0% | |
| TGAGAGGTCGAAGACGGAGT+AGG | - | chr1_2:75778822-75778841 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | + | chr1_2:75778899-75778918 | Msa0092970:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | - | chr1_2:75778904-75778923 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | - | chr1_2:75778905-75778924 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | + | chr1_2:75778910-75778929 | Msa0092970:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | + | chr1_2:75778919-75778938 | Msa0092970:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | + | chr1_2:75779349-75779368 | Msa0092970:CDS | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | + | chr1_2:75779429-75779448 | Msa0092970:CDS | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | + | chr1_2:75779474-75779493 | Msa0092970:CDS | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | + | chr1_2:75779483-75779502 | Msa0092970:CDS | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | - | chr1_2:75780268-75780287 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | + | chr1_2:75780748-75780767 | Msa0092970:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | + | chr1_2:75780908-75780927 | Msa0092970:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | - | chr1_2:75780922-75780941 | None:intergenic | 55.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | + | chr1_2:75779495-75779514 | Msa0092970:CDS | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | - | chr1_2:75780925-75780944 | None:intergenic | 60.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | + | chr1_2:75779495-75779514 | Msa0092970:CDS | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | - | chr1_2:75780925-75780944 | None:intergenic | 60.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | + | chr1_2:75779354-75779373 | Msa0092970:CDS | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | + | chr1_2:75779355-75779374 | Msa0092970:CDS | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | + | chr1_2:75779367-75779386 | Msa0092970:CDS | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | - | chr1_2:75780758-75780777 | None:intergenic | 65.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | + | chr1_2:75779354-75779373 | Msa0092970:CDS | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | + | chr1_2:75779355-75779374 | Msa0092970:CDS | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | + | chr1_2:75779367-75779386 | Msa0092970:CDS | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | - | chr1_2:75780758-75780777 | None:intergenic | 65.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | + | chr1_2:75779363-75779382 | Msa0092970:CDS | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | + | chr1_2:75779366-75779385 | Msa0092970:CDS | 70.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | + | chr1_2:75779363-75779382 | Msa0092970:CDS | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | + | chr1_2:75779366-75779385 | Msa0092970:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 75778719 | 75781065 | 75778719 | ID=Msa0092970;Name=Msa0092970 |
| chr1_2 | mRNA | 75778719 | 75781065 | 75778719 | ID=Msa0092970-mRNA-1;Parent=Msa0092970;Name=Msa0092970-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|1|0.5|1|1|1|2|102|479 |
| chr1_2 | exon | 75778719 | 75779645 | 75778719 | ID=Msa0092970-mRNA-1:exon:26672;Parent=Msa0092970-mRNA-1 |
| chr1_2 | exon | 75780451 | 75781065 | 75780451 | ID=Msa0092970-mRNA-1:exon:26673;Parent=Msa0092970-mRNA-1 |
| chr1_2 | CDS | 75778719 | 75779645 | 75778719 | ID=Msa0092970-mRNA-1:cds;Parent=Msa0092970-mRNA-1 |
| chr1_2 | CDS | 75780451 | 75780963 | 75780451 | ID=Msa0092970-mRNA-1:cds;Parent=Msa0092970-mRNA-1 |
| chr1_2 | three_prime_UTR | 75780964 | 75781065 | 75780964 | ID=Msa0092970-mRNA-1:three_prime_utr;Parent=Msa0092970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
