Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476770 | XP_003603333.2 | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476770 | sp|D2XNR1|FLOT4_MEDTR | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476770 | G7JAE5 | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005260 | Msa0476770 | 0.825455 | 4.645029e-54 | -8.615850e-47 |
| Msa0022470 | Msa0476770 | 0.834849 | 2.362538e-56 | -8.615850e-47 |
| Msa0026420 | Msa0476770 | 0.802285 | 6.032935e-49 | -8.615850e-47 |
| Msa0030800 | Msa0476770 | 0.800296 | 1.540699e-48 | -8.615850e-47 |
| Msa0059900 | Msa0476770 | 0.802194 | 6.297684e-49 | -8.615850e-47 |
| Msa0071470 | Msa0476770 | 0.839729 | 1.331269e-57 | -8.615850e-47 |
| Msa0078210 | Msa0476770 | 0.803284 | 3.751445e-49 | -8.615850e-47 |
| Msa0086360 | Msa0476770 | 0.838995 | 2.064044e-57 | -8.615850e-47 |
| Msa0090380 | Msa0476770 | 0.826827 | 2.191048e-54 | -8.615850e-47 |
| Msa0092970 | Msa0476770 | 0.989406 | 5.496305e-178 | -8.615850e-47 |
| Msa0104810 | Msa0476770 | 0.844758 | 6.198287e-59 | -8.615850e-47 |
| Msa0118010 | Msa0476770 | 0.837991 | 3.749088e-57 | -8.615850e-47 |
| Msa0119430 | Msa0476770 | 0.811736 | 6.032106e-51 | -8.615850e-47 |
| Msa0137860 | Msa0476770 | 0.834325 | 3.199685e-56 | -8.615850e-47 |
| Msa0143640 | Msa0476770 | 0.803291 | 3.738404e-49 | -8.615850e-47 |
| Msa0151170 | Msa0476770 | 0.813201 | 2.885126e-51 | -8.615850e-47 |
| Msa0161560 | Msa0476770 | 0.836367 | 9.752763e-57 | -8.615850e-47 |
| Msa0162680 | Msa0476770 | 0.800752 | 1.243833e-48 | -8.615850e-47 |
| Msa0164250 | Msa0476770 | 0.831857 | 1.316268e-55 | -8.615850e-47 |
| Msa0185100 | Msa0476770 | 0.856475 | 3.137710e-62 | -8.615850e-47 |
| Msa0193190 | Msa0476770 | 0.867391 | 1.416812e-65 | -8.615850e-47 |
| Msa0204170 | Msa0476770 | 0.824685 | 7.058012e-54 | -8.615850e-47 |
| Msa0218090 | Msa0476770 | 0.806138 | 9.516119e-50 | -8.615850e-47 |
| Msa0234740 | Msa0476770 | 0.809429 | 1.900883e-50 | -8.615850e-47 |
| Msa0376970 | Msa0476770 | 0.804931 | 1.704575e-49 | -8.615850e-47 |
| Msa0393100 | Msa0476770 | 0.838380 | 2.976963e-57 | -8.615850e-47 |
| Msa0397180 | Msa0476770 | 0.816977 | 4.186024e-52 | -8.615850e-47 |
| Msa0443450 | Msa0476770 | 0.814458 | 1.525147e-51 | -8.615850e-47 |
| Msa0476770 | Msa0488580 | 0.841696 | 4.061876e-58 | -8.615850e-47 |
| Msa0476770 | Msa0497860 | 0.801807 | 7.563486e-49 | -8.615850e-47 |
| Msa0476770 | Msa0500770 | 0.802853 | 4.606807e-49 | -8.615850e-47 |
| Msa0476770 | Msa0521130 | 0.938332 | 8.017429e-99 | -8.615850e-47 |
| Msa0476770 | Msa0534270 | 0.814322 | 1.634125e-51 | -8.615850e-47 |
| Msa0476770 | Msa0556270 | 0.801563 | 8.490047e-49 | -8.615850e-47 |
| Msa0476770 | Msa0576560 | 0.817152 | 3.824390e-52 | -8.615850e-47 |
| Msa0476770 | Msa0590390 | 0.818037 | 2.415734e-52 | -8.615850e-47 |
| Msa0476770 | Msa0650560 | 0.801227 | 9.947470e-49 | -8.615850e-47 |
| Msa0476770 | Msa0662580 | 0.832639 | 8.430285e-56 | -8.615850e-47 |
| Msa0476770 | Msa0713060 | 0.806731 | 7.132396e-50 | -8.615850e-47 |
| Msa0476770 | Msa0717860 | 0.814089 | 1.840127e-51 | -8.615850e-47 |
| Msa0476770 | Msa0740630 | 0.808197 | 3.485765e-50 | -8.615850e-47 |
| Msa0476770 | Msa0746340 | 0.803849 | 2.865086e-49 | -8.615850e-47 |
| Msa0476770 | Msa0753930 | 0.819506 | 1.120380e-52 | -8.615850e-47 |
| Msa0476770 | Msa0758520 | 0.836080 | 1.154069e-56 | -8.615850e-47 |
| Msa0476770 | Msa0758570 | 0.835220 | 1.905221e-56 | -8.615850e-47 |
| Msa0476770 | Msa0804870 | 0.866795 | 2.196205e-65 | -8.615850e-47 |
| Msa0476770 | Msa0807020 | 0.831175 | 1.937388e-55 | -8.615850e-47 |
| Msa0476770 | Msa0820880 | 0.812419 | 4.279160e-51 | -8.615850e-47 |
| Msa0476770 | Msa0829050 | 0.987837 | 1.013968e-171 | -8.615850e-47 |
| Msa0476770 | Msa0832950 | 0.869357 | 3.290335e-66 | -8.615850e-47 |
| Msa0476770 | Msa0838870 | 0.841810 | 3.790463e-58 | -8.615850e-47 |
| Msa0476770 | Msa0848020 | 0.838690 | 2.475729e-57 | -8.615850e-47 |
| Msa0476770 | Msa0859040 | 0.826079 | 3.303228e-54 | -8.615850e-47 |
| Msa0476770 | Msa0881510 | 0.820803 | 5.654405e-53 | -8.615850e-47 |
| Msa0476770 | Msa0945130 | 0.809799 | 1.582433e-50 | -8.615850e-47 |
| Msa0476770 | Msa0965780 | 0.812390 | 4.344099e-51 | -8.615850e-47 |
| Msa0476770 | Msa1000800 | 0.825644 | 4.189227e-54 | -8.615850e-47 |
| Msa0476770 | Msa1026890 | 0.819303 | 1.246913e-52 | -8.615850e-47 |
| Msa0476770 | Msa1027910 | 0.851552 | 8.240581e-61 | -8.615850e-47 |
| Msa0476770 | Msa1030200 | 0.828819 | 7.274049e-55 | -8.615850e-47 |
| Msa0476770 | Msa1030210 | 0.818891 | 1.546992e-52 | -8.615850e-47 |
| Msa0476770 | Msa1069250 | 0.809965 | 1.457554e-50 | -8.615850e-47 |
| Msa0476770 | Msa1084890 | 0.838268 | 3.180199e-57 | -8.615850e-47 |
| Msa0476770 | Msa1120580 | 0.838782 | 2.343178e-57 | -8.615850e-47 |
| Msa0476770 | Msa1131790 | 0.804633 | 1.966879e-49 | -8.615850e-47 |
| Msa0476770 | Msa1132980 | 0.833103 | 6.461732e-56 | -8.615850e-47 |
| Msa0476770 | Msa1157110 | 0.841521 | 4.518851e-58 | -8.615850e-47 |
| Msa0476770 | Msa1184400 | 0.851446 | 8.828833e-61 | -8.615850e-47 |
| Msa0476770 | Msa1225580 | 0.851317 | 9.601779e-61 | -8.615850e-47 |
| Msa0476770 | Msa1252810 | 0.806529 | 7.871519e-50 | -8.615850e-47 |
| Msa0476770 | Msa1307930 | 0.816531 | 5.271315e-52 | -8.615850e-47 |
| Msa0476770 | Msa1355510 | 0.862602 | 4.512088e-64 | -8.615850e-47 |
| Msa0476770 | Msa1356130 | 0.805117 | 1.558496e-49 | -8.615850e-47 |
| Msa0476770 | Msa1369320 | 0.805678 | 1.188774e-49 | -8.615850e-47 |
| Msa0476770 | Msa1369450 | 0.838288 | 3.144115e-57 | -8.615850e-47 |
| Msa0476770 | Msa1395250 | 0.803719 | 3.048460e-49 | -8.615850e-47 |
| Msa0476770 | Msa1398900 | 0.813125 | 2.997939e-51 | -8.615850e-47 |
| Msa0476770 | Msa1403690 | 0.801304 | 9.590361e-49 | -8.615850e-47 |
| Msa0476770 | Msa1405500 | 0.800188 | 1.620175e-48 | -8.615850e-47 |
| Msa0476770 | Msa1413800 | 0.800016 | 1.756142e-48 | -8.615850e-47 |
| Msa0476770 | Msa1422230 | 0.813290 | 2.758182e-51 | -8.615850e-47 |
| Msa0476770 | Msa1433410 | 0.828561 | 8.397665e-55 | -8.615850e-47 |
| Msa0476770 | Msa1435320 | 0.899909 | 1.242285e-77 | -8.615850e-47 |
| Msa0476770 | Msa1436090 | 0.800779 | 1.228075e-48 | -8.615850e-47 |
| Msa0476770 | Msa1443400 | 0.900171 | 9.569325e-78 | -8.615850e-47 |
| Msa0476770 | Msa1448040 | 0.900052 | 1.076611e-77 | -8.615850e-47 |
| Msa0247470 | Msa0476770 | 0.819577 | 1.079597e-52 | -8.615850e-47 |
| Msa0264680 | Msa0476770 | 0.861963 | 7.089813e-64 | -8.615850e-47 |
| Msa0273070 | Msa0476770 | 0.861031 | 1.364999e-63 | -8.615850e-47 |
| Msa0276430 | Msa0476770 | 0.808076 | 3.699970e-50 | -8.615850e-47 |
| Msa0302730 | Msa0476770 | 0.840199 | 1.003919e-57 | -8.615850e-47 |
| Msa0306310 | Msa0476770 | 0.903607 | 2.913488e-79 | -8.615850e-47 |
| Msa0316470 | Msa0476770 | 0.820416 | 6.937823e-53 | -8.615850e-47 |
| Msa0324840 | Msa0476770 | 0.813595 | 2.364094e-51 | -8.615850e-47 |
| Msa0335080 | Msa0476770 | 0.804664 | 1.937994e-49 | -8.615850e-47 |
| Msa0345890 | Msa0476770 | 0.837732 | 4.370534e-57 | -8.615850e-47 |
| Msa0345980 | Msa0476770 | 0.857739 | 1.329451e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476770 | MtrunA17_Chr3g0137271 | 98.539 | 479 | 3 | 2 | 1 | 479 | 1 | 475 | 0.0 | 944 |
| Msa0476770 | MtrunA17_Chr3g0137321 | 92.887 | 478 | 34 | 0 | 1 | 478 | 1 | 478 | 0.0 | 906 |
| Msa0476770 | MtrunA17_Chr3g0137261 | 92.050 | 478 | 38 | 0 | 1 | 478 | 3 | 480 | 0.0 | 870 |
| Msa0476770 | MtrunA17_Chr3g0137341 | 91.632 | 478 | 36 | 2 | 1 | 478 | 1 | 474 | 0.0 | 857 |
| Msa0476770 | MtrunA17_Chr1g0192071 | 91.841 | 478 | 31 | 1 | 1 | 478 | 3 | 472 | 0.0 | 852 |
| Msa0476770 | MtrunA17_Chr1g0186201 | 92.259 | 478 | 33 | 1 | 1 | 478 | 1 | 474 | 0.0 | 848 |
| Msa0476770 | MtrunA17_Chr1g0212211 | 75.564 | 532 | 73 | 5 | 1 | 478 | 1 | 529 | 0.0 | 764 |
| Msa0476770 | MtrunA17_Chr8g0364981 | 83.575 | 414 | 42 | 4 | 52 | 464 | 1 | 389 | 0.0 | 618 |
| Msa0476770 | MtrunA17_Chr1g0184991 | 93.117 | 247 | 17 | 0 | 1 | 247 | 1 | 247 | 4.67e-170 | 478 |
| Msa0476770 | MtrunA17_Chr3g0137301 | 91.710 | 193 | 16 | 0 | 285 | 477 | 1 | 193 | 2.25e-123 | 357 |
| Msa0476770 | MtrunA17_Chr1g0184981 | 89.691 | 194 | 17 | 1 | 285 | 478 | 1 | 191 | 6.43e-123 | 356 |
| Msa0476770 | MtrunA17_Chr3g0137311 | 87.407 | 135 | 17 | 0 | 1 | 135 | 19 | 153 | 8.66e-81 | 247 |
| Msa0476770 | MtrunA17_Chr3g0110461 | 83.333 | 42 | 7 | 0 | 113 | 154 | 1 | 42 | 2.55e-16 | 72.8 |
| Msa0476770 | MtrunA17_Chr8g0364991 | 82.051 | 39 | 7 | 0 | 1 | 39 | 1 | 39 | 6.18e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476770 | AT5G25260.1 | 74.419 | 473 | 109 | 2 | 1 | 473 | 1 | 461 | 0.0 | 721 |
| Msa0476770 | AT5G25250.1 | 74.841 | 473 | 105 | 2 | 1 | 473 | 1 | 459 | 0.0 | 719 |
| Msa0476770 | AT5G64870.1 | 70.763 | 472 | 127 | 1 | 2 | 473 | 3 | 463 | 0.0 | 647 |
Find 122 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAATATTTCTCATATT+TGG | 0.034420 | 3_3:-80674458 | Msa0476770:CDS |
| CACTAGTCTTTCAGACTTTC+AGG | 0.104707 | 3_3:-80672620 | Msa0476770:three_prime_UTR |
| GTGAGATTGGTTCGAAATTA+AGG | 0.141080 | 3_3:-80674369 | Msa0476770:CDS |
| CTGCTTCCATTTGTGTCTTT+TGG | 0.142752 | 3_3:+80674434 | None:intergenic |
| GAGTTTAAACAAGAAGTATT+TGG | 0.198991 | 3_3:-80674559 | Msa0476770:CDS |
| ACTTCAAAGGTGTAATTTAC+AGG | 0.279006 | 3_3:+80674805 | None:intergenic |
| CATGAATATTTCTCATATTT+GGG | 0.285753 | 3_3:-80674457 | Msa0476770:CDS |
| AGGGATTACTTAATGATAAA+TGG | 0.291040 | 3_3:-80672947 | Msa0476770:CDS |
| CTGCTAAAGCCGTAGCTCTA+AGG | 0.291473 | 3_3:-80674129 | Msa0476770:CDS |
| ATATATATATCGACAATAAA+AGG | 0.294040 | 3_3:+80672653 | None:intergenic |
| AACAAGTTCCTTAACATGAT+TGG | 0.309318 | 3_3:+80674657 | None:intergenic |
| AGTTTAAACAAGAAGTATTT+GGG | 0.333241 | 3_3:-80674558 | Msa0476770:CDS |
| TCACAATACCTTGTGATAAC+TGG | 0.348490 | 3_3:-80674907 | Msa0476770:CDS |
| AGAGCTATATGCAAAGAAAA+AGG | 0.353826 | 3_3:-80673059 | Msa0476770:CDS |
| ATCATGAGGGGAAATTAGTT+TGG | 0.369987 | 3_3:+80674687 | None:intergenic |
| TGTAAATCAATAAACCGAAT+TGG | 0.376492 | 3_3:+80674515 | None:intergenic |
| GTAACATTCCCGTTTGTTCA+TGG | 0.378374 | 3_3:+80672750 | None:intergenic |
| AAGATTAGCATTTGGACTAA+TGG | 0.384982 | 3_3:-80672866 | Msa0476770:CDS |
| TATAGGTACAAGAAGCAAAC+TGG | 0.387176 | 3_3:-80673201 | Msa0476770:intron |
| TGAGATTGGTTCGAAATTAA+GGG | 0.391205 | 3_3:-80674368 | Msa0476770:CDS |
| TTAGTCCAAATGCTAATCTT+AGG | 0.400981 | 3_3:+80672869 | None:intergenic |
| CAACTTGAACTAAACCAATT+CGG | 0.410262 | 3_3:-80674529 | Msa0476770:CDS |
| GGCTGAGGCTAATTCTGAAT+TGG | 0.413100 | 3_3:-80674203 | Msa0476770:CDS |
| TTGAGCCTAAGATTAGCATT+TGG | 0.413132 | 3_3:-80672874 | Msa0476770:CDS |
| CGGTCCTCGTGTGGATGATA+AGG | 0.423356 | 3_3:-80674728 | Msa0476770:CDS |
| ACTAATGGTGGTGATAATAG+TGG | 0.431222 | 3_3:-80672851 | Msa0476770:CDS |
| GAAGAAAGCGGCTTGGACTA+AGG | 0.439534 | 3_3:-80674176 | Msa0476770:CDS |
| TACCTTGTGATAACTGGAAT+CGG | 0.450729 | 3_3:-80674901 | Msa0476770:CDS |
| TAAACTCTCCAATCATGTTA+AGG | 0.453562 | 3_3:-80674665 | Msa0476770:CDS |
| AATGTTACCACCTGCTTGGA+TGG | 0.462701 | 3_3:-80672735 | Msa0476770:CDS |
| AAGACAGCGGGGAGAACAAA+AGG | 0.470694 | 3_3:+80674757 | None:intergenic |
| CATGTTAAGGAACTTGTTCA+AGG | 0.472007 | 3_3:-80674652 | Msa0476770:CDS |
| GCTAAGATGAAAGGTGAGAT+TGG | 0.475874 | 3_3:-80674382 | Msa0476770:CDS |
| CTCCCCGCTGTCTTCACTAT+CGG | 0.478414 | 3_3:-80674748 | Msa0476770:CDS |
| TAAGACTGTCCATGAACAAA+CGG | 0.483381 | 3_3:-80672759 | Msa0476770:CDS |
| GGGAATAACTGAAGGTGCCA+TGG | 0.487818 | 3_3:-80672828 | Msa0476770:CDS |
| GAAACAACTACACAGCTGTA+AGG | 0.490449 | 3_3:-80672967 | Msa0476770:CDS |
| CTCAAGTCCGCGTACCGCCT+CGG | 0.491620 | 3_3:+80672892 | None:intergenic |
| TTTGGGCCAAAAGACACAAA+TGG | 0.502028 | 3_3:-80674440 | Msa0476770:CDS |
| CGGGAATGTTACCACCTGCT+TGG | 0.507160 | 3_3:-80672739 | Msa0476770:CDS |
| TGCTTCAATGACAATGGAAG+AGG | 0.507417 | 3_3:-80674599 | Msa0476770:CDS |
| CTCAAAATCAACCATGTACA+AGG | 0.508124 | 3_3:-80674941 | None:intergenic |
| CTAAGGGATGCTGAGTTACA+AGG | 0.508698 | 3_3:-80674112 | Msa0476770:CDS |
| GAGAGAAGCTGAAGTGGCTG+AGG | 0.509792 | 3_3:-80674218 | Msa0476770:CDS |
| CTTGTTCAAGGAATCATTGA+AGG | 0.510892 | 3_3:-80674640 | Msa0476770:CDS |
| TTGGACTAAGGCGGCTCAAG+TGG | 0.511474 | 3_3:-80674164 | Msa0476770:CDS |
| GAATCAGAGAGAAGCTGAAG+TGG | 0.511635 | 3_3:-80674224 | Msa0476770:CDS |
| GTTATTGCGATGCAGAGGGC+TGG | 0.513050 | 3_3:-80674298 | Msa0476770:CDS |
| GGACCGATAGTGAAGACAGC+GGG | 0.513792 | 3_3:+80674745 | None:intergenic |
| AAGACTGTCCATGAACAAAC+GGG | 0.515531 | 3_3:-80672758 | Msa0476770:CDS |
| GGCTCAAGTGGCCGAAGTTG+AGG | 0.521394 | 3_3:-80674152 | Msa0476770:CDS |
| GCTGGAGAGGGCGACAAGGA+GGG | 0.521545 | 3_3:-80674280 | Msa0476770:CDS |
| GAAGACGGAGTAGGATTGAC+CGG | 0.524836 | 3_3:+80674837 | None:intergenic |
| GAGGGCTGGAGAGGGCGACA+AGG | 0.525696 | 3_3:-80674284 | Msa0476770:CDS |
| GTAACACTTGGGAATGCTCA+AGG | 0.527999 | 3_3:-80673022 | Msa0476770:CDS |
| TGCTAAAGCCGTAGCTCTAA+GGG | 0.534229 | 3_3:-80674128 | Msa0476770:CDS |
| GGAATAACTGAAGGTGCCAT+GGG | 0.534697 | 3_3:-80672827 | Msa0476770:CDS |
| AGCAACTTCTTTCATACCCA+TGG | 0.534773 | 3_3:+80672811 | None:intergenic |
| GGCAAGACTCCCATCCAAGC+AGG | 0.534806 | 3_3:+80672725 | None:intergenic |
| GCAGAGGGAATTGTAACACT+TGG | 0.536418 | 3_3:-80673034 | Msa0476770:CDS |
| GGCTGGAGAGGGCGACAAGG+AGG | 0.536888 | 3_3:-80674281 | Msa0476770:CDS |
| GCTCATTGCTTGAACTTCAA+AGG | 0.540493 | 3_3:+80674792 | None:intergenic |
| GCGATGCAGAGGGCTGGAGA+GGG | 0.540981 | 3_3:-80674292 | Msa0476770:CDS |
| CTCAGCATCCCTTAGAGCTA+CGG | 0.547484 | 3_3:+80674120 | None:intergenic |
| TGCGATGCAGAGGGCTGGAG+AGG | 0.550159 | 3_3:-80674293 | Msa0476770:CDS |
| ATTGAACGCTAGCTTTGCTA+AGG | 0.553614 | 3_3:+80674035 | None:intergenic |
| TAAAGCTTGCAAAGAAAGCA+TGG | 0.553863 | 3_3:-80674867 | Msa0476770:CDS |
| TTAGTTTGGCGTATTTGAGA+AGG | 0.553890 | 3_3:+80674701 | None:intergenic |
| TAAAGTGAGGACTGAAGTGA+AGG | 0.556664 | 3_3:-80674254 | Msa0476770:CDS |
| TGGCTAAGAAGAAAGCGGCT+TGG | 0.558254 | 3_3:-80674183 | Msa0476770:CDS |
| AAACAGTTAGTTGATGTGCC+AGG | 0.562976 | 3_3:-80674481 | Msa0476770:CDS |
| TTTGTATGAGAAGAAGGCAG+AGG | 0.567950 | 3_3:-80673143 | Msa0476770:CDS |
| ATGTTACCACCTGCTTGGAT+GGG | 0.569893 | 3_3:-80672734 | Msa0476770:CDS |
| GGAGCTGTACAAGAAACAAA+AGG | 0.571542 | 3_3:-80673179 | Msa0476770:CDS |
| TCATGGACAGTCTTAAACAA+AGG | 0.574375 | 3_3:+80672767 | None:intergenic |
| TGGAAGCAGCGAATCAAGCA+AGG | 0.574713 | 3_3:-80674420 | Msa0476770:CDS |
| CTTCACTATCGGTCCTCGTG+TGG | 0.576587 | 3_3:-80674737 | Msa0476770:CDS |
| TGAGAGGTCGAAGACGGAGT+AGG | 0.579128 | 3_3:+80674828 | None:intergenic |
| ATGGGTATGAAAGAAGTTGC+TGG | 0.579940 | 3_3:-80672809 | Msa0476770:CDS |
| TAACACTTGGGAATGCTCAA+GGG | 0.580610 | 3_3:-80673021 | Msa0476770:CDS |
| CCTCGCTGCTTCAATGACAA+TGG | 0.585018 | 3_3:-80674605 | Msa0476770:CDS |
| AAACAACTACACAGCTGTAA+GGG | 0.585417 | 3_3:-80672966 | Msa0476770:CDS |
| CTAATGGTGGTGATAATAGT+GGG | 0.587233 | 3_3:-80672850 | Msa0476770:CDS |
| GGCTTTAGCAGCCTCAACTT+CGG | 0.588855 | 3_3:+80674141 | None:intergenic |
| ATTAGCATTTGGACTAATGG+TGG | 0.590526 | 3_3:-80672863 | Msa0476770:CDS |
| GATTGGAGAGTTTATCATGA+GGG | 0.592992 | 3_3:+80674674 | None:intergenic |
| AGTGCACTTCTGAATGCACT+TGG | 0.593608 | 3_3:-80672989 | Msa0476770:CDS |
| CAAAGGTTATTGCGATGCAG+AGG | 0.594400 | 3_3:-80674303 | Msa0476770:CDS |
| TTCCGATTCCAGTTATCACA+AGG | 0.603437 | 3_3:+80674899 | None:intergenic |
| GTATCAGAAGCTAAGATGAA+AGG | 0.607033 | 3_3:-80674391 | Msa0476770:CDS |
| AGTTACAAGGTGAAGTTGAG+AGG | 0.609202 | 3_3:-80674099 | Msa0476770:CDS |
| ATTGGAGAGTTTATCATGAG+GGG | 0.615848 | 3_3:+80674675 | None:intergenic |
| TGAATTGGCTAAGAAGAAAG+CGG | 0.615999 | 3_3:-80674188 | Msa0476770:CDS |
| CAGAGGGAATTGTAACACTT+GGG | 0.616845 | 3_3:-80673033 | Msa0476770:CDS |
| ATAGGTACAAGAAGCAAACT+GGG | 0.617338 | 3_3:-80673200 | Msa0476770:intron |
| TACAGGTGAGAGGTCGAAGA+CGG | 0.620713 | 3_3:+80674822 | None:intergenic |
| AAAGGTTATTGCGATGCAGA+GGG | 0.625617 | 3_3:-80674302 | Msa0476770:CDS |
| GTACAAGAAACAAAAGGAGG+CGG | 0.626062 | 3_3:-80673173 | Msa0476770:CDS |
| AACACTTGGGAATGCTCAAG+GGG | 0.627744 | 3_3:-80673020 | Msa0476770:CDS |
| AATGGTGGTGATAATAGTGG+GGG | 0.629638 | 3_3:-80672848 | Msa0476770:CDS |
| AGGTGTAATTTACAGGTGAG+AGG | 0.630097 | 3_3:+80674812 | None:intergenic |
| ATTGGTTCGAAATTAAGGGA+AGG | 0.631020 | 3_3:-80674364 | Msa0476770:CDS |
| TAATGGTGGTGATAATAGTG+GGG | 0.634711 | 3_3:-80672849 | Msa0476770:CDS |
| GATTACTTAATGATAAATGG+TGG | 0.642965 | 3_3:-80672944 | Msa0476770:CDS |
| GATTGCTAAGATTAATGCCG+AGG | 0.643593 | 3_3:-80672909 | Msa0476770:CDS |
| TGGACAGTCTTAAACAAAGG+TGG | 0.647859 | 3_3:+80672770 | None:intergenic |
| TATGAGAAATATTCATGACC+TGG | 0.653740 | 3_3:+80674463 | None:intergenic |
| AAGACGGAGTAGGATTGACC+GGG | 0.657113 | 3_3:+80674838 | None:intergenic |
| TGCTAAGATTAATGCCGAGG+CGG | 0.661554 | 3_3:-80672906 | Msa0476770:CDS |
| TAGCGTTCAATATGAAACCA+AGG | 0.661629 | 3_3:-80674023 | Msa0476770:intron |
| AAGAAAGCATGGATTCTACC+CGG | 0.664070 | 3_3:-80674856 | Msa0476770:CDS |
| GGAAGCAGCGAATCAAGCAA+GGG | 0.666342 | 3_3:-80674419 | Msa0476770:CDS |
| TGATTGGAGAGTTTATCATG+AGG | 0.672105 | 3_3:+80674673 | None:intergenic |
| AAGACTCCCATCCAAGCAGG+TGG | 0.679480 | 3_3:+80672728 | None:intergenic |
| ATTAATGCCGAGGCGGTACG+CGG | 0.680968 | 3_3:-80672899 | Msa0476770:CDS |
| ACAAGGAGGGAATTAAAGTG+AGG | 0.693697 | 3_3:-80674267 | Msa0476770:CDS |
| CTTTCCTTATCATCCACACG+AGG | 0.701431 | 3_3:+80674724 | None:intergenic |
| CCATTGTCATTGAAGCAGCG+AGG | 0.707893 | 3_3:+80674605 | None:intergenic |
| GACCGATAGTGAAGACAGCG+GGG | 0.713902 | 3_3:+80674746 | None:intergenic |
| GCTGTACAAGAAACAAAAGG+AGG | 0.725038 | 3_3:-80673176 | Msa0476770:CDS |
| GAAAGCGGCTTGGACTAAGG+CGG | 0.747622 | 3_3:-80674173 | Msa0476770:CDS |
| AGGACCGATAGTGAAGACAG+CGG | 0.753084 | 3_3:+80674744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTATTGATTCTTTTATA+TGG | - | chr3_3:80673929-80673948 | Msa0476770:intron | 15.0% |
| !!! | GTTGCATTTTTTTAAATAAT+TGG | - | chr3_3:80673962-80673981 | Msa0476770:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | + | chr3_3:80674232-80674251 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | - | chr3_3:80674234-80674253 | Msa0476770:CDS | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | + | chr3_3:80674882-80674901 | None:intergenic | 15.0% |
| !!! | TGATTATTGATTCTTTTATA+TGG | - | chr3_3:80673929-80673948 | Msa0476770:intron | 15.0% |
| !!! | GTTGCATTTTTTTAAATAAT+TGG | - | chr3_3:80673962-80673981 | Msa0476770:intron | 15.0% |
| !! | TAGGTATTAACTATTAATTT+AGG | + | chr3_3:80674232-80674251 | None:intergenic | 15.0% |
| !! | ATTAATAGTTAATACCTATT+AGG | - | chr3_3:80674234-80674253 | Msa0476770:CDS | 15.0% |
| !! | ATATATATATCGACAATAAA+AGG | + | chr3_3:80674882-80674901 | None:intergenic | 15.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | - | chr3_3:80672974-80672993 | Msa0476770:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | - | chr3_3:80673074-80673093 | Msa0476770:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | - | chr3_3:80673075-80673094 | Msa0476770:CDS | 20.0% |
| !!! | AGTTTAAACAAGAAGTATTT+GGG | - | chr3_3:80672974-80672993 | Msa0476770:CDS | 20.0% |
| !! | TCATGAATATTTCTCATATT+TGG | - | chr3_3:80673074-80673093 | Msa0476770:CDS | 20.0% |
| !! | CATGAATATTTCTCATATTT+GGG | - | chr3_3:80673075-80673094 | Msa0476770:CDS | 20.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | - | chr3_3:80672973-80672992 | Msa0476770:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | + | chr3_3:80673020-80673039 | None:intergenic | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | - | chr3_3:80673664-80673683 | Msa0476770:intron | 25.0% |
| ! | CATTTGGTTAAACCTTAAAA+GGG | + | chr3_3:80673789-80673808 | None:intergenic | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+AGG | + | chr3_3:80673790-80673809 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | + | chr3_3:80674018-80674037 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | - | chr3_3:80674186-80674205 | Msa0476770:CDS | 25.0% |
| ! | ATATATTTACTAGGCCTAAT+AGG | + | chr3_3:80674251-80674270 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | - | chr3_3:80674304-80674323 | Msa0476770:CDS | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | - | chr3_3:80674585-80674604 | Msa0476770:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | - | chr3_3:80674588-80674607 | Msa0476770:CDS | 25.0% |
| !!! | GAGTTTAAACAAGAAGTATT+TGG | - | chr3_3:80672973-80672992 | Msa0476770:CDS | 25.0% |
| ! | TGTAAATCAATAAACCGAAT+TGG | + | chr3_3:80673020-80673039 | None:intergenic | 25.0% |
| ! | TAGCAACAAGATTAATAGTT+TGG | - | chr3_3:80673664-80673683 | Msa0476770:intron | 25.0% |
| ! | CATTTGGTTAAACCTTAAAA+GGG | + | chr3_3:80673789-80673808 | None:intergenic | 25.0% |
| ! | TCATTTGGTTAAACCTTAAA+AGG | + | chr3_3:80673790-80673809 | None:intergenic | 25.0% |
| ! | AATTCTCTATTAAGCTGTTA+TGG | + | chr3_3:80674018-80674037 | None:intergenic | 25.0% |
| ! | ATGCATTATACAATTACAAG+TGG | - | chr3_3:80674186-80674205 | Msa0476770:CDS | 25.0% |
| ! | ATATATTTACTAGGCCTAAT+AGG | + | chr3_3:80674251-80674270 | None:intergenic | 25.0% |
| !!! | TTTTTTCGTGATTGAAATTC+TGG | - | chr3_3:80674304-80674323 | Msa0476770:CDS | 25.0% |
| ! | AGGGATTACTTAATGATAAA+TGG | - | chr3_3:80674585-80674604 | Msa0476770:CDS | 25.0% |
| ! | GATTACTTAATGATAAATGG+TGG | - | chr3_3:80674588-80674607 | Msa0476770:CDS | 25.0% |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | + | chr3_3:80672730-80672749 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | - | chr3_3:80672867-80672886 | Msa0476770:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | + | chr3_3:80672878-80672897 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | - | chr3_3:80673003-80673022 | Msa0476770:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | + | chr3_3:80673072-80673091 | None:intergenic | 30.0% | |
| !! | TGAGATTGGTTCGAAATTAA+GGG | - | chr3_3:80673164-80673183 | Msa0476770:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | - | chr3_3:80673212-80673231 | Msa0476770:intron | 30.0% | |
| !! | GTTTTAAACTCTCCCTTTTA+AGG | - | chr3_3:80673774-80673793 | Msa0476770:intron | 30.0% |
| ! | TCAACACTATTTTACAACCT+TGG | - | chr3_3:80674037-80674056 | Msa0476770:CDS | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | - | chr3_3:80674044-80674063 | Msa0476770:CDS | 30.0% |
| TACTATAATGAGATCACAGT+TGG | - | chr3_3:80674113-80674132 | Msa0476770:CDS | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | + | chr3_3:80674168-80674187 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | + | chr3_3:80674169-80674188 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | - | chr3_3:80674314-80674333 | Msa0476770:CDS | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | - | chr3_3:80674473-80674492 | Msa0476770:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | + | chr3_3:80674666-80674685 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | - | chr3_3:80674666-80674685 | Msa0476770:CDS | 30.0% | |
| ! | ACTTCAAAGGTGTAATTTAC+AGG | + | chr3_3:80672730-80672749 | None:intergenic | 30.0% |
| TAAACTCTCCAATCATGTTA+AGG | - | chr3_3:80672867-80672886 | Msa0476770:CDS | 30.0% | |
| AACAAGTTCCTTAACATGAT+TGG | + | chr3_3:80672878-80672897 | None:intergenic | 30.0% | |
| CAACTTGAACTAAACCAATT+CGG | - | chr3_3:80673003-80673022 | Msa0476770:CDS | 30.0% | |
| TATGAGAAATATTCATGACC+TGG | + | chr3_3:80673072-80673091 | None:intergenic | 30.0% | |
| !! | TGAGATTGGTTCGAAATTAA+GGG | - | chr3_3:80673164-80673183 | Msa0476770:CDS | 30.0% |
| AAAAATTGATGCAGAGACAA+AGG | - | chr3_3:80673212-80673231 | Msa0476770:intron | 30.0% | |
| !! | GTTTTAAACTCTCCCTTTTA+AGG | - | chr3_3:80673774-80673793 | Msa0476770:intron | 30.0% |
| ! | TCAACACTATTTTACAACCT+TGG | - | chr3_3:80674037-80674056 | Msa0476770:CDS | 30.0% |
| !! | TATTTTACAACCTTGGTGAT+TGG | - | chr3_3:80674044-80674063 | Msa0476770:CDS | 30.0% |
| TACTATAATGAGATCACAGT+TGG | - | chr3_3:80674113-80674132 | Msa0476770:CDS | 30.0% | |
| ATATTATTCTATCGAGTAGC+GGG | + | chr3_3:80674168-80674187 | None:intergenic | 30.0% | |
| CATATTATTCTATCGAGTAG+CGG | + | chr3_3:80674169-80674188 | None:intergenic | 30.0% | |
| ATTGAAATTCTGGATGGTAT+AGG | - | chr3_3:80674314-80674333 | Msa0476770:CDS | 30.0% | |
| AGAGCTATATGCAAAGAAAA+AGG | - | chr3_3:80674473-80674492 | Msa0476770:CDS | 30.0% | |
| TTAGTCCAAATGCTAATCTT+AGG | + | chr3_3:80674666-80674685 | None:intergenic | 30.0% | |
| AAGATTAGCATTTGGACTAA+TGG | - | chr3_3:80674666-80674685 | Msa0476770:CDS | 30.0% | |
| TCACAATACCTTGTGATAAC+TGG | - | chr3_3:80672625-80672644 | Msa0476770:three_prime_UTR | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | - | chr3_3:80672631-80672650 | Msa0476770:three_prime_UTR | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | - | chr3_3:80672665-80672684 | Msa0476770:three_prime_UTR | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | + | chr3_3:80672834-80672853 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | + | chr3_3:80672848-80672867 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | + | chr3_3:80672860-80672879 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | + | chr3_3:80672861-80672880 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | + | chr3_3:80672862-80672881 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | - | chr3_3:80672880-80672899 | Msa0476770:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | - | chr3_3:80672892-80672911 | Msa0476770:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | - | chr3_3:80673141-80673160 | Msa0476770:CDS | 35.0% | |
| !! | GTGAGATTGGTTCGAAATTA+AGG | - | chr3_3:80673163-80673182 | Msa0476770:CDS | 35.0% |
| !! | ATTGGTTCGAAATTAAGGGA+AGG | - | chr3_3:80673168-80673187 | Msa0476770:CDS | 35.0% |
| TGAATTGGCTAAGAAGAAAG+CGG | - | chr3_3:80673344-80673363 | Msa0476770:intron | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | - | chr3_3:80673509-80673528 | Msa0476770:intron | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | + | chr3_3:80673529-80673548 | None:intergenic | 35.0% | |
| ACTCATGATCAATGGACAAT+GGG | - | chr3_3:80673815-80673834 | Msa0476770:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | + | chr3_3:80674057-80674076 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | + | chr3_3:80674167-80674186 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | - | chr3_3:80674308-80674327 | Msa0476770:CDS | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | - | chr3_3:80674331-80674350 | Msa0476770:CDS | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | - | chr3_3:80674332-80674351 | Msa0476770:CDS | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | - | chr3_3:80674383-80674402 | Msa0476770:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | - | chr3_3:80674476-80674495 | Msa0476770:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | - | chr3_3:80674566-80674585 | Msa0476770:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | - | chr3_3:80674658-80674677 | Msa0476770:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | - | chr3_3:80674669-80674688 | Msa0476770:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | - | chr3_3:80674681-80674700 | Msa0476770:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | - | chr3_3:80674682-80674701 | Msa0476770:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | - | chr3_3:80674683-80674702 | Msa0476770:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | + | chr3_3:80674768-80674787 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | - | chr3_3:80674773-80674792 | Msa0476770:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | + | chr3_3:80674831-80674850 | None:intergenic | 35.0% |
| TCACAATACCTTGTGATAAC+TGG | - | chr3_3:80672625-80672644 | Msa0476770:three_prime_UTR | 35.0% | |
| TACCTTGTGATAACTGGAAT+CGG | - | chr3_3:80672631-80672650 | Msa0476770:three_prime_UTR | 35.0% | |
| TAAAGCTTGCAAAGAAAGCA+TGG | - | chr3_3:80672665-80672684 | Msa0476770:three_prime_UTR | 35.0% | |
| ! | TTAGTTTGGCGTATTTGAGA+AGG | + | chr3_3:80672834-80672853 | None:intergenic | 35.0% |
| ATCATGAGGGGAAATTAGTT+TGG | + | chr3_3:80672848-80672867 | None:intergenic | 35.0% | |
| ATTGGAGAGTTTATCATGAG+GGG | + | chr3_3:80672860-80672879 | None:intergenic | 35.0% | |
| GATTGGAGAGTTTATCATGA+GGG | + | chr3_3:80672861-80672880 | None:intergenic | 35.0% | |
| TGATTGGAGAGTTTATCATG+AGG | + | chr3_3:80672862-80672881 | None:intergenic | 35.0% | |
| ! | CATGTTAAGGAACTTGTTCA+AGG | - | chr3_3:80672880-80672899 | Msa0476770:CDS | 35.0% |
| CTTGTTCAAGGAATCATTGA+AGG | - | chr3_3:80672892-80672911 | Msa0476770:CDS | 35.0% | |
| GTATCAGAAGCTAAGATGAA+AGG | - | chr3_3:80673141-80673160 | Msa0476770:CDS | 35.0% | |
| !! | GTGAGATTGGTTCGAAATTA+AGG | - | chr3_3:80673163-80673182 | Msa0476770:CDS | 35.0% |
| !! | ATTGGTTCGAAATTAAGGGA+AGG | - | chr3_3:80673168-80673187 | Msa0476770:CDS | 35.0% |
| TGAATTGGCTAAGAAGAAAG+CGG | - | chr3_3:80673344-80673363 | Msa0476770:intron | 35.0% | |
| TAGCGTTCAATATGAAACCA+AGG | - | chr3_3:80673509-80673528 | Msa0476770:intron | 35.0% | |
| TGCATGTACTAAACTAACCT+TGG | + | chr3_3:80673529-80673548 | None:intergenic | 35.0% | |
| ACTCATGATCAATGGACAAT+GGG | - | chr3_3:80673815-80673834 | Msa0476770:intron | 35.0% | |
| TTGATTGATACCAATCACCA+AGG | + | chr3_3:80674057-80674076 | None:intergenic | 35.0% | |
| TATTATTCTATCGAGTAGCG+GGG | + | chr3_3:80674167-80674186 | None:intergenic | 35.0% | |
| TTCGTGATTGAAATTCTGGA+TGG | - | chr3_3:80674308-80674327 | Msa0476770:CDS | 35.0% | |
| TATAGGTACAAGAAGCAAAC+TGG | - | chr3_3:80674331-80674350 | Msa0476770:CDS | 35.0% | |
| ATAGGTACAAGAAGCAAACT+GGG | - | chr3_3:80674332-80674351 | Msa0476770:CDS | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | - | chr3_3:80674383-80674402 | Msa0476770:CDS | 35.0% |
| GCTATATGCAAAGAAAAAGG+AGG | - | chr3_3:80674476-80674495 | Msa0476770:CDS | 35.0% | |
| AAACAACTACACAGCTGTAA+GGG | - | chr3_3:80674566-80674585 | Msa0476770:CDS | 35.0% | |
| TTGAGCCTAAGATTAGCATT+TGG | - | chr3_3:80674658-80674677 | Msa0476770:CDS | 35.0% | |
| ATTAGCATTTGGACTAATGG+TGG | - | chr3_3:80674669-80674688 | Msa0476770:CDS | 35.0% | |
| ! | ACTAATGGTGGTGATAATAG+TGG | - | chr3_3:80674681-80674700 | Msa0476770:CDS | 35.0% |
| ! | CTAATGGTGGTGATAATAGT+GGG | - | chr3_3:80674682-80674701 | Msa0476770:CDS | 35.0% |
| ! | TAATGGTGGTGATAATAGTG+GGG | - | chr3_3:80674683-80674702 | Msa0476770:CDS | 35.0% |
| TCATGGACAGTCTTAAACAA+AGG | + | chr3_3:80674768-80674787 | None:intergenic | 35.0% | |
| TAAGACTGTCCATGAACAAA+CGG | - | chr3_3:80674773-80674792 | Msa0476770:CDS | 35.0% | |
| !! | TCCTAATTCGAGTTTTTGTC+AGG | + | chr3_3:80674831-80674850 | None:intergenic | 35.0% |
| TTCCGATTCCAGTTATCACA+AGG | + | chr3_3:80672636-80672655 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | - | chr3_3:80672676-80672695 | Msa0476770:three_prime_UTR | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | + | chr3_3:80672723-80672742 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | + | chr3_3:80672743-80672762 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | - | chr3_3:80672933-80672952 | Msa0476770:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | - | chr3_3:80672943-80672962 | Msa0476770:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | - | chr3_3:80673051-80673070 | Msa0476770:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | - | chr3_3:80673092-80673111 | Msa0476770:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | + | chr3_3:80673101-80673120 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | - | chr3_3:80673150-80673169 | Msa0476770:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | - | chr3_3:80673230-80673249 | Msa0476770:intron | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | - | chr3_3:80673265-80673284 | Msa0476770:intron | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | - | chr3_3:80673278-80673297 | Msa0476770:intron | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | - | chr3_3:80673433-80673452 | Msa0476770:intron | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | + | chr3_3:80673500-80673519 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | + | chr3_3:80673805-80673824 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | - | chr3_3:80673807-80673826 | Msa0476770:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | - | chr3_3:80673814-80673833 | Msa0476770:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | + | chr3_3:80674166-80674185 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | - | chr3_3:80674353-80674372 | Msa0476770:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | - | chr3_3:80674356-80674375 | Msa0476770:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | - | chr3_3:80674359-80674378 | Msa0476770:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | - | chr3_3:80674389-80674408 | Msa0476770:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | - | chr3_3:80674499-80674518 | Msa0476770:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | - | chr3_3:80674511-80674530 | Msa0476770:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | - | chr3_3:80674565-80674584 | Msa0476770:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | - | chr3_3:80674623-80674642 | Msa0476770:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | - | chr3_3:80674684-80674703 | Msa0476770:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | - | chr3_3:80674696-80674715 | Msa0476770:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | + | chr3_3:80674724-80674743 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | - | chr3_3:80674723-80674742 | Msa0476770:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | + | chr3_3:80674765-80674784 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | - | chr3_3:80674774-80674793 | Msa0476770:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | + | chr3_3:80674785-80674804 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | - | chr3_3:80674827-80674846 | Msa0476770:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | - | chr3_3:80674912-80674931 | Msa0476770:CDS | 40.0% |
| TTCCGATTCCAGTTATCACA+AGG | + | chr3_3:80672636-80672655 | None:intergenic | 40.0% | |
| ! | AAGAAAGCATGGATTCTACC+CGG | - | chr3_3:80672676-80672695 | Msa0476770:three_prime_UTR | 40.0% |
| AGGTGTAATTTACAGGTGAG+AGG | + | chr3_3:80672723-80672742 | None:intergenic | 40.0% | |
| GCTCATTGCTTGAACTTCAA+AGG | + | chr3_3:80672743-80672762 | None:intergenic | 40.0% | |
| TGCTTCAATGACAATGGAAG+AGG | - | chr3_3:80672933-80672952 | Msa0476770:CDS | 40.0% | |
| ! | ACAATGGAAGAGGTTTTCAG+AGG | - | chr3_3:80672943-80672962 | Msa0476770:CDS | 40.0% |
| ! | AAACAGTTAGTTGATGTGCC+AGG | - | chr3_3:80673051-80673070 | Msa0476770:CDS | 40.0% |
| TTTGGGCCAAAAGACACAAA+TGG | - | chr3_3:80673092-80673111 | Msa0476770:CDS | 40.0% | |
| ! | CTGCTTCCATTTGTGTCTTT+TGG | + | chr3_3:80673101-80673120 | None:intergenic | 40.0% |
| GCTAAGATGAAAGGTGAGAT+TGG | - | chr3_3:80673150-80673169 | Msa0476770:CDS | 40.0% | |
| AAAGGTTATTGCGATGCAGA+GGG | - | chr3_3:80673230-80673249 | Msa0476770:intron | 40.0% | |
| ACAAGGAGGGAATTAAAGTG+AGG | - | chr3_3:80673265-80673284 | Msa0476770:intron | 40.0% | |
| TAAAGTGAGGACTGAAGTGA+AGG | - | chr3_3:80673278-80673297 | Msa0476770:intron | 40.0% | |
| AGTTACAAGGTGAAGTTGAG+AGG | - | chr3_3:80673433-80673452 | Msa0476770:intron | 40.0% | |
| !! | ATTGAACGCTAGCTTTGCTA+AGG | + | chr3_3:80673500-80673519 | None:intergenic | 40.0% |
| GATCATGAGTGTGACTCATT+TGG | + | chr3_3:80673805-80673824 | None:intergenic | 40.0% | |
| TGAGTCACACTCATGATCAA+TGG | - | chr3_3:80673807-80673826 | Msa0476770:intron | 40.0% | |
| CACTCATGATCAATGGACAA+TGG | - | chr3_3:80673814-80673833 | Msa0476770:intron | 40.0% | |
| ATTATTCTATCGAGTAGCGG+GGG | + | chr3_3:80674166-80674185 | None:intergenic | 40.0% | |
| GGAGCTGTACAAGAAACAAA+AGG | - | chr3_3:80674353-80674372 | Msa0476770:CDS | 40.0% | |
| GCTGTACAAGAAACAAAAGG+AGG | - | chr3_3:80674356-80674375 | Msa0476770:CDS | 40.0% | |
| GTACAAGAAACAAAAGGAGG+CGG | - | chr3_3:80674359-80674378 | Msa0476770:CDS | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | - | chr3_3:80674389-80674408 | Msa0476770:CDS | 40.0% | |
| CAGAGGGAATTGTAACACTT+GGG | - | chr3_3:80674499-80674518 | Msa0476770:CDS | 40.0% | |
| TAACACTTGGGAATGCTCAA+GGG | - | chr3_3:80674511-80674530 | Msa0476770:CDS | 40.0% | |
| GAAACAACTACACAGCTGTA+AGG | - | chr3_3:80674565-80674584 | Msa0476770:CDS | 40.0% | |
| GATTGCTAAGATTAATGCCG+AGG | - | chr3_3:80674623-80674642 | Msa0476770:CDS | 40.0% | |
| ! | AATGGTGGTGATAATAGTGG+GGG | - | chr3_3:80674684-80674703 | Msa0476770:CDS | 40.0% |
| ! | AATAGTGGGGGAATAACTGA+AGG | - | chr3_3:80674696-80674715 | Msa0476770:CDS | 40.0% |
| AGCAACTTCTTTCATACCCA+TGG | + | chr3_3:80674724-80674743 | None:intergenic | 40.0% | |
| ATGGGTATGAAAGAAGTTGC+TGG | - | chr3_3:80674723-80674742 | Msa0476770:CDS | 40.0% | |
| TGGACAGTCTTAAACAAAGG+TGG | + | chr3_3:80674765-80674784 | None:intergenic | 40.0% | |
| AAGACTGTCCATGAACAAAC+GGG | - | chr3_3:80674774-80674793 | Msa0476770:CDS | 40.0% | |
| GTAACATTCCCGTTTGTTCA+TGG | + | chr3_3:80674785-80674804 | None:intergenic | 40.0% | |
| GCCTGACAAAAACTCGAATT+AGG | - | chr3_3:80674827-80674846 | Msa0476770:CDS | 40.0% | |
| !! | CACTAGTCTTTCAGACTTTC+AGG | - | chr3_3:80674912-80674931 | Msa0476770:CDS | 40.0% |
| CTTTCCTTATCATCCACACG+AGG | + | chr3_3:80672811-80672830 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | - | chr3_3:80673229-80673248 | Msa0476770:intron | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | - | chr3_3:80673308-80673327 | Msa0476770:intron | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | - | chr3_3:80673329-80673348 | Msa0476770:intron | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | - | chr3_3:80673404-80673423 | Msa0476770:intron | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | - | chr3_3:80673420-80673439 | Msa0476770:intron | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | - | chr3_3:80674482-80674501 | Msa0476770:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | - | chr3_3:80674483-80674502 | Msa0476770:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | - | chr3_3:80674498-80674517 | Msa0476770:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | - | chr3_3:80674510-80674529 | Msa0476770:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | - | chr3_3:80674512-80674531 | Msa0476770:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | - | chr3_3:80674543-80674562 | Msa0476770:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | - | chr3_3:80674626-80674645 | Msa0476770:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | - | chr3_3:80674705-80674724 | Msa0476770:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | - | chr3_3:80674797-80674816 | Msa0476770:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | - | chr3_3:80674798-80674817 | Msa0476770:CDS | 45.0% | |
| CTTTCCTTATCATCCACACG+AGG | + | chr3_3:80672811-80672830 | None:intergenic | 45.0% | |
| CAAAGGTTATTGCGATGCAG+AGG | - | chr3_3:80673229-80673248 | Msa0476770:intron | 45.0% | |
| GAATCAGAGAGAAGCTGAAG+TGG | - | chr3_3:80673308-80673327 | Msa0476770:intron | 45.0% | |
| GGCTGAGGCTAATTCTGAAT+TGG | - | chr3_3:80673329-80673348 | Msa0476770:intron | 45.0% | |
| !! | TGCTAAAGCCGTAGCTCTAA+GGG | - | chr3_3:80673404-80673423 | Msa0476770:intron | 45.0% |
| CTAAGGGATGCTGAGTTACA+AGG | - | chr3_3:80673420-80673439 | Msa0476770:intron | 45.0% | |
| TGCAAAGAAAAAGGAGGCAG+AGG | - | chr3_3:80674482-80674501 | Msa0476770:CDS | 45.0% | |
| GCAAAGAAAAAGGAGGCAGA+GGG | - | chr3_3:80674483-80674502 | Msa0476770:CDS | 45.0% | |
| GCAGAGGGAATTGTAACACT+TGG | - | chr3_3:80674498-80674517 | Msa0476770:CDS | 45.0% | |
| GTAACACTTGGGAATGCTCA+AGG | - | chr3_3:80674510-80674529 | Msa0476770:CDS | 45.0% | |
| AACACTTGGGAATGCTCAAG+GGG | - | chr3_3:80674512-80674531 | Msa0476770:CDS | 45.0% | |
| AGTGCACTTCTGAATGCACT+TGG | - | chr3_3:80674543-80674562 | Msa0476770:CDS | 45.0% | |
| TGCTAAGATTAATGCCGAGG+CGG | - | chr3_3:80674626-80674645 | Msa0476770:CDS | 45.0% | |
| !! | GGAATAACTGAAGGTGCCAT+GGG | - | chr3_3:80674705-80674724 | Msa0476770:CDS | 45.0% |
| AATGTTACCACCTGCTTGGA+TGG | - | chr3_3:80674797-80674816 | Msa0476770:CDS | 45.0% | |
| ATGTTACCACCTGCTTGGAT+GGG | - | chr3_3:80674798-80674817 | Msa0476770:CDS | 45.0% | |
| !!! | ATAAAAGATTAATATTTTTA+AGG | - | chr3_3:80673840-80673859 | Msa0476770:intron | 5.0% |
| !! | ATATATATAATATATTTACT+AGG | + | chr3_3:80674260-80674279 | None:intergenic | 5.0% |
| !!! | ATAAAAGATTAATATTTTTA+AGG | - | chr3_3:80673840-80673859 | Msa0476770:intron | 5.0% |
| !! | ATATATATAATATATTTACT+AGG | + | chr3_3:80674260-80674279 | None:intergenic | 5.0% |
| AAGACGGAGTAGGATTGACC+GGG | + | chr3_3:80672697-80672716 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | + | chr3_3:80672698-80672717 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | + | chr3_3:80672713-80672732 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | + | chr3_3:80672778-80672797 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | + | chr3_3:80672791-80672810 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | + | chr3_3:80672930-80672949 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | - | chr3_3:80672927-80672946 | Msa0476770:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | - | chr3_3:80673112-80673131 | Msa0476770:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | - | chr3_3:80673113-80673132 | Msa0476770:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | - | chr3_3:80673349-80673368 | Msa0476770:intron | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | - | chr3_3:80673356-80673375 | Msa0476770:intron | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | + | chr3_3:80673394-80673413 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | - | chr3_3:80673403-80673422 | Msa0476770:intron | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | + | chr3_3:80673415-80673434 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | + | chr3_3:80674152-80674171 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | - | chr3_3:80674704-80674723 | Msa0476770:CDS | 50.0% |
| AAGACGGAGTAGGATTGACC+GGG | + | chr3_3:80672697-80672716 | None:intergenic | 50.0% | |
| GAAGACGGAGTAGGATTGAC+CGG | + | chr3_3:80672698-80672717 | None:intergenic | 50.0% | |
| TACAGGTGAGAGGTCGAAGA+CGG | + | chr3_3:80672713-80672732 | None:intergenic | 50.0% | |
| AAGACAGCGGGGAGAACAAA+AGG | + | chr3_3:80672778-80672797 | None:intergenic | 50.0% | |
| AGGACCGATAGTGAAGACAG+CGG | + | chr3_3:80672791-80672810 | None:intergenic | 50.0% | |
| CCATTGTCATTGAAGCAGCG+AGG | + | chr3_3:80672930-80672949 | None:intergenic | 50.0% | |
| CCTCGCTGCTTCAATGACAA+TGG | - | chr3_3:80672927-80672946 | Msa0476770:CDS | 50.0% | |
| TGGAAGCAGCGAATCAAGCA+AGG | - | chr3_3:80673112-80673131 | Msa0476770:CDS | 50.0% | |
| GGAAGCAGCGAATCAAGCAA+GGG | - | chr3_3:80673113-80673132 | Msa0476770:CDS | 50.0% | |
| TGGCTAAGAAGAAAGCGGCT+TGG | - | chr3_3:80673349-80673368 | Msa0476770:intron | 50.0% | |
| ! | GAAGAAAGCGGCTTGGACTA+AGG | - | chr3_3:80673356-80673375 | Msa0476770:intron | 50.0% |
| ! | GGCTTTAGCAGCCTCAACTT+CGG | + | chr3_3:80673394-80673413 | None:intergenic | 50.0% |
| ! | CTGCTAAAGCCGTAGCTCTA+AGG | - | chr3_3:80673403-80673422 | Msa0476770:intron | 50.0% |
| CTCAGCATCCCTTAGAGCTA+CGG | + | chr3_3:80673415-80673434 | None:intergenic | 50.0% | |
| ! | TAGCGGGGGAGCTAACTTTT+GGG | + | chr3_3:80674152-80674171 | None:intergenic | 50.0% |
| !! | GGGAATAACTGAAGGTGCCA+TGG | - | chr3_3:80674704-80674723 | Msa0476770:CDS | 50.0% |
| TGAGAGGTCGAAGACGGAGT+AGG | + | chr3_3:80672707-80672726 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | - | chr3_3:80672784-80672803 | Msa0476770:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | + | chr3_3:80672789-80672808 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | + | chr3_3:80672790-80672809 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | - | chr3_3:80672795-80672814 | Msa0476770:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | - | chr3_3:80672804-80672823 | Msa0476770:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | - | chr3_3:80673234-80673253 | Msa0476770:intron | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | - | chr3_3:80673314-80673333 | Msa0476770:intron | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | - | chr3_3:80673359-80673378 | Msa0476770:intron | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | - | chr3_3:80673368-80673387 | Msa0476770:intron | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | + | chr3_3:80674153-80674172 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | - | chr3_3:80674633-80674652 | Msa0476770:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | - | chr3_3:80674793-80674812 | Msa0476770:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | + | chr3_3:80674807-80674826 | None:intergenic | 55.0% | |
| TGAGAGGTCGAAGACGGAGT+AGG | + | chr3_3:80672707-80672726 | None:intergenic | 55.0% | |
| CTCCCCGCTGTCTTCACTAT+CGG | - | chr3_3:80672784-80672803 | Msa0476770:CDS | 55.0% | |
| GACCGATAGTGAAGACAGCG+GGG | + | chr3_3:80672789-80672808 | None:intergenic | 55.0% | |
| GGACCGATAGTGAAGACAGC+GGG | + | chr3_3:80672790-80672809 | None:intergenic | 55.0% | |
| CTTCACTATCGGTCCTCGTG+TGG | - | chr3_3:80672795-80672814 | Msa0476770:CDS | 55.0% | |
| CGGTCCTCGTGTGGATGATA+AGG | - | chr3_3:80672804-80672823 | Msa0476770:CDS | 55.0% | |
| GTTATTGCGATGCAGAGGGC+TGG | - | chr3_3:80673234-80673253 | Msa0476770:intron | 55.0% | |
| GAGAGAAGCTGAAGTGGCTG+AGG | - | chr3_3:80673314-80673333 | Msa0476770:intron | 55.0% | |
| ! | GAAAGCGGCTTGGACTAAGG+CGG | - | chr3_3:80673359-80673378 | Msa0476770:intron | 55.0% |
| TTGGACTAAGGCGGCTCAAG+TGG | - | chr3_3:80673368-80673387 | Msa0476770:intron | 55.0% | |
| !! | GTAGCGGGGGAGCTAACTTT+TGG | + | chr3_3:80674153-80674172 | None:intergenic | 55.0% |
| ATTAATGCCGAGGCGGTACG+CGG | - | chr3_3:80674633-80674652 | Msa0476770:CDS | 55.0% | |
| CGGGAATGTTACCACCTGCT+TGG | - | chr3_3:80674793-80674812 | Msa0476770:CDS | 55.0% | |
| AAGACTCCCATCCAAGCAGG+TGG | + | chr3_3:80674807-80674826 | None:intergenic | 55.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | - | chr3_3:80673380-80673399 | Msa0476770:intron | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | + | chr3_3:80674810-80674829 | None:intergenic | 60.0% | |
| GGCTCAAGTGGCCGAAGTTG+AGG | - | chr3_3:80673380-80673399 | Msa0476770:intron | 60.0% | |
| GGCAAGACTCCCATCCAAGC+AGG | + | chr3_3:80674810-80674829 | None:intergenic | 60.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | - | chr3_3:80673239-80673258 | Msa0476770:intron | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | - | chr3_3:80673240-80673259 | Msa0476770:intron | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | - | chr3_3:80673252-80673271 | Msa0476770:intron | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | + | chr3_3:80674643-80674662 | None:intergenic | 65.0% | |
| TGCGATGCAGAGGGCTGGAG+AGG | - | chr3_3:80673239-80673258 | Msa0476770:intron | 65.0% | |
| GCGATGCAGAGGGCTGGAGA+GGG | - | chr3_3:80673240-80673259 | Msa0476770:intron | 65.0% | |
| GCTGGAGAGGGCGACAAGGA+GGG | - | chr3_3:80673252-80673271 | Msa0476770:intron | 65.0% | |
| CTCAAGTCCGCGTACCGCCT+CGG | + | chr3_3:80674643-80674662 | None:intergenic | 65.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | - | chr3_3:80673248-80673267 | Msa0476770:intron | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | - | chr3_3:80673251-80673270 | Msa0476770:intron | 70.0% | |
| GAGGGCTGGAGAGGGCGACA+AGG | - | chr3_3:80673248-80673267 | Msa0476770:intron | 70.0% | |
| GGCTGGAGAGGGCGACAAGG+AGG | - | chr3_3:80673251-80673270 | Msa0476770:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 80672604 | 80674950 | 80672604 | ID=Msa0476770;Name=Msa0476770 |
| chr3_3 | mRNA | 80672604 | 80674950 | 80672604 | ID=Msa0476770-mRNA-1;Parent=Msa0476770;Name=Msa0476770-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|1|0.5|1|1|1|2|102|479 |
| chr3_3 | exon | 80672604 | 80673218 | 80672604 | ID=Msa0476770-mRNA-1:exon:22225;Parent=Msa0476770-mRNA-1 |
| chr3_3 | exon | 80674024 | 80674950 | 80674024 | ID=Msa0476770-mRNA-1:exon:22224;Parent=Msa0476770-mRNA-1 |
| chr3_3 | CDS | 80674024 | 80674950 | 80674024 | ID=Msa0476770-mRNA-1:cds;Parent=Msa0476770-mRNA-1 |
| chr3_3 | CDS | 80672706 | 80673218 | 80672706 | ID=Msa0476770-mRNA-1:cds;Parent=Msa0476770-mRNA-1 |
| chr3_3 | three_prime_UTR | 80672604 | 80672705 | 80672604 | ID=Msa0476770-mRNA-1:three_prime_utr;Parent=Msa0476770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
