Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879550 | XP_024642095.1 | 94.000 | 250 | 14 | 1 | 1 | 250 | 1 | 249 | 7.62e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879550 | A0A396HGA5 | 94.000 | 250 | 14 | 1 | 1 | 250 | 1 | 249 | 3.64e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa0879550 | -0.825231 | 5.245784e-54 | -8.615850e-47 |
| Msa0026450 | Msa0879550 | -0.803122 | 4.053140e-49 | -8.615850e-47 |
| Msa0050930 | Msa0879550 | -0.800098 | 1.690346e-48 | -8.615850e-47 |
| Msa0078610 | Msa0879550 | -0.809254 | 2.072200e-50 | -8.615850e-47 |
| Msa0120400 | Msa0879550 | -0.804160 | 2.468289e-49 | -8.615850e-47 |
| Msa0658570 | Msa0879550 | -0.804515 | 2.082122e-49 | -8.615850e-47 |
| Msa0740110 | Msa0879550 | 0.825394 | 4.801460e-54 | -8.615850e-47 |
| Msa0760130 | Msa0879550 | -0.802047 | 6.751909e-49 | -8.615850e-47 |
| Msa0781750 | Msa0879550 | -0.800678 | 1.287454e-48 | -8.615850e-47 |
| Msa0140500 | Msa0879550 | 0.802172 | 6.363935e-49 | -8.615850e-47 |
| Msa0145260 | Msa0879550 | -0.803562 | 3.286001e-49 | -8.615850e-47 |
| Msa0223410 | Msa0879550 | 0.807073 | 6.040996e-50 | -8.615850e-47 |
| Msa0234440 | Msa0879550 | -0.816083 | 6.639807e-52 | -8.615850e-47 |
| Msa0381600 | Msa0879550 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0381610 | Msa0879550 | 0.826106 | 3.255028e-54 | -8.615850e-47 |
| Msa0443290 | Msa0879550 | -0.834040 | 3.771326e-56 | -8.615850e-47 |
| Msa0444750 | Msa0879550 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0469940 | Msa0879550 | 0.820082 | 8.278563e-53 | -8.615850e-47 |
| Msa0272730 | Msa0879550 | -0.817216 | 3.699123e-52 | -8.615850e-47 |
| Msa0290870 | Msa0879550 | -0.806024 | 1.005555e-49 | -8.615850e-47 |
| Msa0350320 | Msa0879550 | 0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0350870 | Msa0879550 | -0.828793 | 7.377429e-55 | -8.615850e-47 |
| Msa0490870 | Msa0879550 | -0.805578 | 1.247833e-49 | -8.615850e-47 |
| Msa0492880 | Msa0879550 | -0.814923 | 1.202968e-51 | -8.615850e-47 |
| Msa0532810 | Msa0879550 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0879550 | Msa0882570 | 0.951181 | 3.507314e-109 | -8.615850e-47 |
| Msa0879550 | Msa0884740 | -0.802814 | 4.693355e-49 | -8.615850e-47 |
| Msa0879550 | Msa0907950 | -0.804716 | 1.889991e-49 | -8.615850e-47 |
| Msa0879550 | Msa0926890 | -0.803077 | 4.140237e-49 | -8.615850e-47 |
| Msa0879550 | Msa0977180 | 0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0879550 | Msa1012590 | 0.806937 | 6.454866e-50 | -8.615850e-47 |
| Msa0879550 | Msa1074090 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0879550 | Msa1075220 | 0.826265 | 2.981962e-54 | -8.615850e-47 |
| Msa0879550 | Msa1121490 | -0.824604 | 7.377030e-54 | -8.615850e-47 |
| Msa0879550 | Msa1139000 | 0.824730 | 6.888887e-54 | -8.615850e-47 |
| Msa0879550 | Msa1144720 | 0.822676 | 2.085412e-53 | -8.615850e-47 |
| Msa0879550 | Msa1159670 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0879550 | Msa1162550 | 0.813121 | 3.005284e-51 | -8.615850e-47 |
| Msa0879550 | Msa1166500 | 0.803589 | 3.243611e-49 | -8.615850e-47 |
| Msa0879550 | Msa1264330 | 0.824312 | 8.641233e-54 | -8.615850e-47 |
| Msa0879550 | Msa1267610 | -0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0879550 | Msa1366760 | 0.806594 | 7.625451e-50 | -8.615850e-47 |
| Msa0879550 | Msa1376890 | -0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa0879550 | Msa1395900 | -0.802089 | 6.619474e-49 | -8.615850e-47 |
| Msa0879550 | Msa1433150 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
| Msa0879550 | Msa1445390 | 0.800118 | 1.674473e-48 | -8.615850e-47 |
| Msa0879550 | Msa1459050 | -0.827106 | 1.879356e-54 | -8.615850e-47 |
| Msa0879550 | Msa1461810 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879550 | MtrunA17_Chr6g0462171 | 94.000 | 250 | 14 | 1 | 1 | 250 | 1 | 249 | 7.01e-176 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879550 | AT2G35790.1 | 74.611 | 193 | 40 | 2 | 62 | 250 | 51 | 238 | 3.31e-99 | 289 |
Find 70 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTTGAGATGCAGTAAAT+TGG | 0.207652 | 6_1:+22084967 | None:intergenic |
| TCCGAAAACTTGATAGTCTT+TGG | 0.213516 | 6_1:+22084561 | None:intergenic |
| TAGGCCTTATGTGACATTTA+AGG | 0.237769 | 6_1:-22084517 | Msa0879550:CDS |
| CATGATAGCATGAACCCTTT+AGG | 0.276085 | 6_1:-22084284 | Msa0879550:three_prime_UTR |
| TATGTGACATTTAAGGCTAA+TGG | 0.315354 | 6_1:-22084510 | Msa0879550:CDS |
| TCTTCCTTATCATCTCCTTC+AGG | 0.337341 | 6_1:-22089183 | Msa0879550:intron |
| TGTGTAGATGTGGTTGGATT+TGG | 0.338414 | 6_1:-22084342 | Msa0879550:three_prime_UTR |
| ATTGTTGGATTAGTAGTAAC+CGG | 0.363216 | 6_1:+22085032 | None:intergenic |
| GGAAGAAGATAAACGGTTGC+GGG | 0.377714 | 6_1:+22089200 | None:intergenic |
| CACAGAACACTGTCACAATA+AGG | 0.380606 | 6_1:-22084469 | Msa0879550:CDS |
| CTTTATTAATAAAACCTAAA+GGG | 0.383102 | 6_1:+22084270 | None:intergenic |
| AACCTCGAAGCTGTCTGAAC+CGG | 0.384867 | 6_1:+22084614 | None:intergenic |
| CCGAAAACTTGATAGTCTTT+GGG | 0.391669 | 6_1:+22084562 | None:intergenic |
| AAATGTCACATAAGGCCTAT+TGG | 0.427501 | 6_1:+22084521 | None:intergenic |
| CATTTGAGATGCAGTAAATT+GGG | 0.432664 | 6_1:+22084968 | None:intergenic |
| TTGCTCCACGGTTTGATTGT+TGG | 0.434895 | 6_1:+22085017 | None:intergenic |
| CTACAACCGCTATCCTTCAC+TGG | 0.443154 | 6_1:-22084674 | Msa0879550:CDS |
| GGAACCTGAAGGAGATGATA+AGG | 0.455065 | 6_1:+22089179 | None:intergenic |
| TGGGAAGACGGCTTATATGC+TGG | 0.462964 | 6_1:+22084987 | None:intergenic |
| CTCGGATTGTTGTACTCCAC+TGG | 0.467172 | 6_1:+22084890 | None:intergenic |
| AACGGTTGCGGGTTTGTGAT+CGG | 0.471201 | 6_1:+22089211 | None:intergenic |
| ACTTTATTAATAAAACCTAA+AGG | 0.475196 | 6_1:+22084269 | None:intergenic |
| TTCGTCCAGCTGACACCAAT+AGG | 0.484168 | 6_1:-22084536 | Msa0879550:CDS |
| TGCTAGACTCACCCCACAAA+AGG | 0.485125 | 6_1:-22084439 | Msa0879550:CDS |
| TGCTGTCTCTCGGTATCTCT+CGG | 0.488625 | 6_1:-22084783 | Msa0879550:CDS |
| TTAGCCTTAAATGTCACATA+AGG | 0.497722 | 6_1:+22084513 | None:intergenic |
| CAAATGAGATGGGCATCAAA+AGG | 0.505343 | 6_1:-22084951 | Msa0879550:CDS |
| ATGATAAGGAAGAAGATAAA+CGG | 0.506648 | 6_1:+22089193 | None:intergenic |
| TCTCTCAACTTGCTGTCTCT+CGG | 0.519620 | 6_1:-22084793 | Msa0879550:CDS |
| TTGAGGATGACATTACTGTC+AGG | 0.523823 | 6_1:+22084735 | None:intergenic |
| TAGCCATGTGTAGATGTGGT+TGG | 0.527367 | 6_1:-22084348 | Msa0879550:three_prime_UTR |
| ACCTCGAAGCTGTCTGAACC+GGG | 0.531929 | 6_1:+22084615 | None:intergenic |
| TAAGGCCTATTGGTGTCAGC+TGG | 0.540333 | 6_1:+22084531 | None:intergenic |
| CATCTGAGTTTGTGAACATA+CGG | 0.543670 | 6_1:+22084642 | None:intergenic |
| GAGGAAGACAAGATCAGCAT+TGG | 0.551218 | 6_1:-22084918 | Msa0879550:CDS |
| CGTATGTTCACAAACTCAGA+TGG | 0.554386 | 6_1:-22084641 | Msa0879550:CDS |
| TTACTGCATCTCAAATGAGA+TGG | 0.555286 | 6_1:-22084962 | Msa0879550:CDS |
| TACTGCATCTCAAATGAGAT+GGG | 0.557710 | 6_1:-22084961 | Msa0879550:CDS |
| CACAAACTCAGATGGGAACC+CGG | 0.557988 | 6_1:-22084633 | Msa0879550:CDS |
| GGTTGAGATGTTGTCATGGT+TGG | 0.558066 | 6_1:-22084595 | Msa0879550:CDS |
| ACTGTCAGGGGATGTCATGA+AGG | 0.563633 | 6_1:+22084749 | None:intergenic |
| GCTGGATTTGCATTGCTCCA+CGG | 0.566497 | 6_1:+22085005 | None:intergenic |
| TGACAGTAATGTCATCCTCA+AGG | 0.568316 | 6_1:-22084733 | Msa0879550:CDS |
| AGGAAGAAGATAAACGGTTG+CGG | 0.582963 | 6_1:+22089199 | None:intergenic |
| GATTGTTGTACTCCACTGGC+AGG | 0.587858 | 6_1:+22084894 | None:intergenic |
| AACCGGGCGTCCGGATGTGG+AGG | 0.589758 | 6_1:+22085049 | None:intergenic |
| GATGCAGTAAATTGGGAAGA+CGG | 0.595617 | 6_1:+22084975 | None:intergenic |
| TCTCTCGGTATCTCTCGGTC+CGG | 0.596437 | 6_1:-22084778 | Msa0879550:CDS |
| TTGTTGGATTAGTAGTAACC+GGG | 0.597339 | 6_1:+22085033 | None:intergenic |
| TGAGGATGACATTACTGTCA+GGG | 0.598643 | 6_1:+22084736 | None:intergenic |
| ATCAGCATTGGACCTGCCAG+TGG | 0.600861 | 6_1:-22084906 | Msa0879550:CDS |
| ATGTGGAGGACCTAAAACAC+TGG | 0.602768 | 6_1:+22085063 | None:intergenic |
| TGTCATCCTCAAGGGTGCAG+TGG | 0.606987 | 6_1:-22084724 | Msa0879550:CDS |
| GATGTCATGAAGGTTATGAC+CGG | 0.607668 | 6_1:+22084759 | None:intergenic |
| GACAGTAATGTCATCCTCAA+GGG | 0.610533 | 6_1:-22084732 | Msa0879550:CDS |
| GGAGTACAACAATCCGAGGA+AGG | 0.613550 | 6_1:-22084885 | Msa0879550:CDS |
| GCTTTAGCCATGTGTAGATG+TGG | 0.616430 | 6_1:-22084352 | Msa0879550:three_prime_UTR |
| ATAATTATTGAAGTTTACTG+TGG | 0.617031 | 6_1:-22084161 | Msa0879550:three_prime_UTR |
| TCGAGGTTGAGATGTTGTCA+TGG | 0.619215 | 6_1:-22084599 | Msa0879550:CDS |
| ACGGACTGACAAACCAGTGA+AGG | 0.626755 | 6_1:+22084661 | None:intergenic |
| ATCAAAAGGCACAACAACAG+AGG | 0.634648 | 6_1:-22084937 | Msa0879550:CDS |
| GACACCGCAGTTTACTACTA+CGG | 0.636046 | 6_1:-22084855 | Msa0879550:CDS |
| CAGTGGAGTACAACAATCCG+AGG | 0.659205 | 6_1:-22084889 | Msa0879550:CDS |
| GTATGTTCACAAACTCAGAT+GGG | 0.660379 | 6_1:-22084640 | Msa0879550:CDS |
| ATGATGCCACTGCACCCTTG+AGG | 0.666549 | 6_1:+22084718 | None:intergenic |
| GACAAACCAGTGAAGGATAG+CGG | 0.672441 | 6_1:+22084668 | None:intergenic |
| GAGGATGACATTACTGTCAG+GGG | 0.692973 | 6_1:+22084737 | None:intergenic |
| AATCCAACCACATCTACACA+TGG | 0.696717 | 6_1:+22084345 | None:intergenic |
| CTAATCCAACAATCAAACCG+TGG | 0.712375 | 6_1:-22085022 | Msa0879550:CDS |
| TGGACCGTAGTAGTAAACTG+CGG | 0.798271 | 6_1:+22084851 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAGTTAATTCAAAA+CGG | + | chr6_1:22084632-22084651 | None:intergenic | 10.0% |
| !!! | AATAAACTGACTTTTTTTTT+AGG | - | chr6_1:22084853-22084872 | Msa0879550:CDS | 15.0% |
| !!! | AAATATCAAAAATGATTTTC+TGG | - | chr6_1:22085350-22085369 | Msa0879550:intron | 15.0% |
| !!! | TAAACTTTTAAATTTGACAT+TGG | - | chr6_1:22085544-22085563 | Msa0879550:intron | 15.0% |
| !! | TTATCCTAAACTAAATTTAA+GGG | - | chr6_1:22086797-22086816 | Msa0879550:intron | 15.0% |
| !!! | CATTAAATTTTTAATTGATG+AGG | + | chr6_1:22086977-22086996 | None:intergenic | 15.0% |
| !! | ATTAAAAATTTAATGACAAG+TGG | - | chr6_1:22086982-22087001 | Msa0879550:intron | 15.0% |
| !!! | ATACAAATTTTAAAGCAAAA+GGG | + | chr6_1:22087622-22087641 | None:intergenic | 15.0% |
| !!! | AATACAAATTTTAAAGCAAA+AGG | + | chr6_1:22087623-22087642 | None:intergenic | 15.0% |
| !! | CATCAAAATAAAAACATTAA+TGG | + | chr6_1:22088329-22088348 | None:intergenic | 15.0% |
| !!! | TAGAAGTTTTACTTTTTTTA+TGG | + | chr6_1:22088621-22088640 | None:intergenic | 15.0% |
| !! | CTTTATTAATAAAACCTAAA+GGG | + | chr6_1:22089169-22089188 | None:intergenic | 15.0% |
| !! | ACTTTATTAATAAAACCTAA+AGG | + | chr6_1:22089170-22089189 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTAACTTCAATTA+TGG | - | chr6_1:22089196-22089215 | Msa0879550:CDS | 15.0% |
| !!! | TTTTTTGTAACTTCAATTAT+GGG | - | chr6_1:22089197-22089216 | Msa0879550:CDS | 15.0% |
| !! | AATGTAAAATGGTTTATGTT+TGG | - | chr6_1:22084883-22084902 | Msa0879550:CDS | 20.0% |
| !!! | TGATTTTGCAAAATTGATTA+TGG | - | chr6_1:22084944-22084963 | Msa0879550:CDS | 20.0% |
| !! | AAATTATAAAATGAACTCGA+TGG | + | chr6_1:22085231-22085250 | None:intergenic | 20.0% |
| !!! | TCGAGTTCATTTTATAATTT+AGG | - | chr6_1:22085231-22085250 | Msa0879550:intron | 20.0% |
| !!! | CGAGTTCATTTTATAATTTA+GGG | - | chr6_1:22085232-22085251 | Msa0879550:intron | 20.0% |
| !! | TTAAATTTGACATTGGAATA+TGG | - | chr6_1:22085551-22085570 | Msa0879550:intron | 20.0% |
| !! | TAAATTTGACATTGGAATAT+GGG | - | chr6_1:22085552-22085571 | Msa0879550:intron | 20.0% |
| !!! | TTAGGATAACACTATTTTTA+TGG | + | chr6_1:22086786-22086805 | None:intergenic | 20.0% |
| !! | GTTATCCTAAACTAAATTTA+AGG | - | chr6_1:22086796-22086815 | Msa0879550:intron | 20.0% |
| !! | TTATTTACAAAACATCACAA+TGG | + | chr6_1:22087313-22087332 | None:intergenic | 20.0% |
| !!! | GTTAAAGTTACTTTTTGAAA+CGG | - | chr6_1:22087530-22087549 | Msa0879550:intron | 20.0% |
| !!! | TTTTTATTGTGATAAGAAAC+AGG | + | chr6_1:22087597-22087616 | None:intergenic | 20.0% |
| !! | GGGATAAATAAATTAGAAAT+GGG | + | chr6_1:22087663-22087682 | None:intergenic | 20.0% |
| !! | TGGGATAAATAAATTAGAAA+TGG | + | chr6_1:22087664-22087683 | None:intergenic | 20.0% |
| !! | ACAGAAATTAAAACCAATTA+GGG | + | chr6_1:22087718-22087737 | None:intergenic | 20.0% |
| !! | TACAGAAATTAAAACCAATT+AGG | + | chr6_1:22087719-22087738 | None:intergenic | 20.0% |
| !!! | AATCTGAAGTTAAAAAATGT+TGG | - | chr6_1:22087974-22087993 | Msa0879550:intron | 20.0% |
| !!! | TAATGGAAATTTCTATTTTG+TGG | - | chr6_1:22088943-22088962 | Msa0879550:intron | 20.0% |
| !!! | TTTTTGTAACTTCAATTATG+GGG | - | chr6_1:22089198-22089217 | Msa0879550:CDS | 20.0% |
| !!! | GAAATCACTAATAATTTTGA+AGG | + | chr6_1:22089235-22089254 | None:intergenic | 20.0% |
| !! | ATAATTATTGAAGTTTACTG+TGG | - | chr6_1:22089275-22089294 | Msa0879550:five_prime_UTR | 20.0% |
| ! | ATGATAAGGAAGAAGATAAA+CGG | + | chr6_1:22084246-22084265 | None:intergenic | 25.0% |
| !!! | ACTAGGGTTTATTGTTTTTT+AGG | - | chr6_1:22084312-22084331 | Msa0879550:three_prime_UTR | 25.0% |
| !!! | CTAGGGTTTATTGTTTTTTA+GGG | - | chr6_1:22084313-22084332 | Msa0879550:three_prime_UTR | 25.0% |
| !!! | CTAGTCATAAGTTTTTTTTG+AGG | + | chr6_1:22084772-22084791 | None:intergenic | 25.0% |
| !!! | AAACTGACTTTTTTTTTAGG+TGG | - | chr6_1:22084856-22084875 | Msa0879550:CDS | 25.0% |
| !!! | AACTGACTTTTTTTTTAGGT+GGG | - | chr6_1:22084857-22084876 | Msa0879550:CDS | 25.0% |
| ! | AAATTGATTATGGCTAAAAG+TGG | - | chr6_1:22084954-22084973 | Msa0879550:CDS | 25.0% |
| ! | AATTGATTATGGCTAAAAGT+GGG | - | chr6_1:22084955-22084974 | Msa0879550:CDS | 25.0% |
| !!! | TAGTATTCAAGTCACTTTTA+CGG | + | chr6_1:22085015-22085034 | None:intergenic | 25.0% |
| !!! | AAGTTAGAATCAGTTCTAAA+TGG | - | chr6_1:22085087-22085106 | Msa0879550:intron | 25.0% |
| !!! | AGTTAGAATCAGTTCTAAAT+GGG | - | chr6_1:22085088-22085107 | Msa0879550:intron | 25.0% |
| !!! | AAATGGGTTATAGTATTAGT+TGG | - | chr6_1:22085104-22085123 | Msa0879550:intron | 25.0% |
| ! | AATTAAAACCCAACAACAAT+AGG | - | chr6_1:22085513-22085532 | Msa0879550:intron | 25.0% |
| ! | TTTCATCAAGATAATTGACA+TGG | + | chr6_1:22085615-22085634 | None:intergenic | 25.0% |
| !! | TGAACTTCTAAATTTGACTT+TGG | - | chr6_1:22086037-22086056 | Msa0879550:intron | 25.0% |
| ! | GTACAAAATATTGTGAAAAG+CGG | + | chr6_1:22086705-22086724 | None:intergenic | 25.0% |
| !! | TCTTCCCTTAAATTTAGTTT+AGG | + | chr6_1:22086804-22086823 | None:intergenic | 25.0% |
| !! | TTAACAGTGTTGAAAAATCA+GGG | + | chr6_1:22086887-22086906 | None:intergenic | 25.0% |
| !! | TTTAACAGTGTTGAAAAATC+AGG | + | chr6_1:22086888-22086907 | None:intergenic | 25.0% |
| ! | AGTAAACAAAAATCCAAAGA+TGG | + | chr6_1:22087039-22087058 | None:intergenic | 25.0% |
| !!! | GACTAGATTTTAGTAACAAA+GGG | + | chr6_1:22087072-22087091 | None:intergenic | 25.0% |
| !!! | AGACTAGATTTTAGTAACAA+AGG | + | chr6_1:22087073-22087092 | None:intergenic | 25.0% |
| ! | AAAACTACTTCACAACAATA+AGG | + | chr6_1:22087384-22087403 | None:intergenic | 25.0% |
| !! | CATCTTAATTTGAAGTTATG+TGG | + | chr6_1:22087908-22087927 | None:intergenic | 25.0% |
| !! | CTTCAGATTGTAGATTTTAT+AGG | + | chr6_1:22087963-22087982 | None:intergenic | 25.0% |
| !!! | TTTTTTATGGTACTTGAGAT+TGG | + | chr6_1:22088608-22088627 | None:intergenic | 25.0% |
| TCTACAGAACTATCTTACTA+GGG | - | chr6_1:22084296-22084315 | Msa0879550:three_prime_UTR | 30.0% | |
| TTTGTGAATTTGTGTCTGTT+TGG | - | chr6_1:22084515-22084534 | Msa0879550:CDS | 30.0% | |
| GTTTATTCAACATCAACGTT+TGG | + | chr6_1:22084840-22084859 | None:intergenic | 30.0% | |
| TGGATACATTTACGTATGTT+TGG | - | chr6_1:22084903-22084922 | Msa0879550:CDS | 30.0% | |
| !!! | AGTATTCAAGTCACTTTTAC+GGG | + | chr6_1:22085014-22085033 | None:intergenic | 30.0% |
| !! | ATGTTTAGTTCCACTTTTGA+AGG | + | chr6_1:22085183-22085202 | None:intergenic | 30.0% |
| AAAGTGGAACTAAACATACA+TGG | - | chr6_1:22085186-22085205 | Msa0879550:intron | 30.0% | |
| !! | AAATGAGAAGTTGTTTCTAG+TGG | + | chr6_1:22085381-22085400 | None:intergenic | 30.0% |
| ! | TTTAAGAGCCTATTGTTGTT+GGG | + | chr6_1:22085524-22085543 | None:intergenic | 30.0% |
| ATTTAAGAGCCTATTGTTGT+TGG | + | chr6_1:22085525-22085544 | None:intergenic | 30.0% | |
| ! | TTTTGTCAAATAGTGGCTTT+AGG | - | chr6_1:22085658-22085677 | Msa0879550:intron | 30.0% |
| ! | TTTGTCAAATAGTGGCTTTA+GGG | - | chr6_1:22085659-22085678 | Msa0879550:intron | 30.0% |
| CATATAAGCTCTTATGCATA+AGG | + | chr6_1:22085889-22085908 | None:intergenic | 30.0% | |
| TTAAGCTGTTTACACAAACA+AGG | - | chr6_1:22085936-22085955 | Msa0879550:intron | 30.0% | |
| ! | CTAAATTTGACTTTGGACTA+TGG | - | chr6_1:22086044-22086063 | Msa0879550:intron | 30.0% |
| ! | TAGCGGCTATAACTTTTATA+AGG | - | chr6_1:22086267-22086286 | Msa0879550:intron | 30.0% |
| ! | ATTTTTCTCCCTCCAATTTA+TGG | - | chr6_1:22086383-22086402 | Msa0879550:intron | 30.0% |
| ! | GTGTTGTTAATCACATATTG+CGG | - | chr6_1:22086428-22086447 | Msa0879550:intron | 30.0% |
| ATACTATCAGTGTTCTCATA+TGG | - | chr6_1:22086495-22086514 | Msa0879550:intron | 30.0% | |
| ! | TAACAGTGTTGAAAAATCAG+GGG | + | chr6_1:22086886-22086905 | None:intergenic | 30.0% |
| ACAAAAATCCAAAGATGGAA+GGG | + | chr6_1:22087034-22087053 | None:intergenic | 30.0% | |
| AACAAAAATCCAAAGATGGA+AGG | + | chr6_1:22087035-22087054 | None:intergenic | 30.0% | |
| !! | CTCTTCTAAAATGTCCATTA+TGG | - | chr6_1:22087096-22087115 | Msa0879550:intron | 30.0% |
| AGAATTTCTACCTCTTTAGT+TGG | - | chr6_1:22087129-22087148 | Msa0879550:intron | 30.0% | |
| TCAACTAAGTAAAGCACAAA+GGG | + | chr6_1:22087194-22087213 | None:intergenic | 30.0% | |
| ATCAACTAAGTAAAGCACAA+AGG | + | chr6_1:22087195-22087214 | None:intergenic | 30.0% | |
| ATAAAGTTGAAAACGAGAAC+TGG | - | chr6_1:22087329-22087348 | Msa0879550:intron | 30.0% | |
| AAGCTGTTTAACACCAATTA+TGG | - | chr6_1:22087477-22087496 | Msa0879550:intron | 30.0% | |
| CTTTCTTAAGATTCTGTCAA+TGG | + | chr6_1:22087566-22087585 | None:intergenic | 30.0% | |
| ACTTGAATCACAGAATGTTA+TGG | - | chr6_1:22087744-22087763 | Msa0879550:intron | 30.0% | |
| !! | TTTGATTTGCTTCTAACACA+TGG | - | chr6_1:22087796-22087815 | Msa0879550:intron | 30.0% |
| ACACATGGTTCATAATGTTT+CGG | - | chr6_1:22087811-22087830 | Msa0879550:intron | 30.0% | |
| GTTGAGAGACTATTAGAATT+TGG | + | chr6_1:22087843-22087862 | None:intergenic | 30.0% | |
| !!! | CACTCATGTACTGTTTTTAA+TGG | - | chr6_1:22088024-22088043 | Msa0879550:intron | 30.0% |
| ! | GTTTTTAATGGTTACTCTTG+AGG | - | chr6_1:22088036-22088055 | Msa0879550:intron | 30.0% |
| GGTCTATATAAATTCAGTTC+AGG | + | chr6_1:22088216-22088235 | None:intergenic | 30.0% | |
| !! | GAATGTTGTTTCTGAAATGA+CGG | - | chr6_1:22088244-22088263 | Msa0879550:intron | 30.0% |
| !! | ATTGTTGGATTAGTAGTAAC+CGG | + | chr6_1:22088407-22088426 | None:intergenic | 30.0% |
| ! | CATTTGAGATGCAGTAAATT+GGG | + | chr6_1:22088471-22088490 | None:intergenic | 30.0% |
| ! | TCATTTGAGATGCAGTAAAT+TGG | + | chr6_1:22088472-22088491 | None:intergenic | 30.0% |
| !! | TTAGCCTTAAATGTCACATA+AGG | + | chr6_1:22088926-22088945 | None:intergenic | 30.0% |
| ! | TATGTGACATTTAAGGCTAA+TGG | - | chr6_1:22088926-22088945 | Msa0879550:intron | 30.0% |
| ! | AATCATGAGTTTCCTTTTGT+GGG | + | chr6_1:22089012-22089031 | None:intergenic | 30.0% |
| CTCTACAGAACTATCTTACT+AGG | - | chr6_1:22084295-22084314 | Msa0879550:three_prime_UTR | 35.0% | |
| GAATTTGTGTCTGTTTGGAT+TGG | - | chr6_1:22084520-22084539 | Msa0879550:CDS | 35.0% | |
| !! | TTTGGATTGGTTGTTTGAGT+TGG | - | chr6_1:22084533-22084552 | Msa0879550:CDS | 35.0% |
| TACTAGTCATAAGCTTGTCA+AGG | + | chr6_1:22084745-22084764 | None:intergenic | 35.0% | |
| TTCAACATCAACGTTTGGAT+TGG | + | chr6_1:22084835-22084854 | None:intergenic | 35.0% | |
| !! | TAGGTGGGTTGAATGTAAAA+TGG | - | chr6_1:22084872-22084891 | Msa0879550:CDS | 35.0% |
| ! | ACTGATTCTAACTTAGAGCT+AGG | + | chr6_1:22085081-22085100 | None:intergenic | 35.0% |
| TTTGACATTGGAATATGGGA+AGG | - | chr6_1:22085556-22085575 | Msa0879550:intron | 35.0% | |
| ATTGGAATATGGGAAGGAAA+TGG | - | chr6_1:22085562-22085581 | Msa0879550:intron | 35.0% | |
| TTGACAAAACTGGTCATTTC+TGG | + | chr6_1:22085647-22085666 | None:intergenic | 35.0% | |
| !! | TGACCAGTTTTGTCAAATAG+TGG | - | chr6_1:22085651-22085670 | Msa0879550:intron | 35.0% |
| AAGCCACTATTTGACAAAAC+TGG | + | chr6_1:22085657-22085676 | None:intergenic | 35.0% | |
| TAAGTACTTGTGAGACTGTT+TGG | - | chr6_1:22085721-22085740 | Msa0879550:intron | 35.0% | |
| AAGTACTTGTGAGACTGTTT+GGG | - | chr6_1:22085722-22085741 | Msa0879550:intron | 35.0% | |
| GCTCAGTACGTAGAAAATAA+AGG | + | chr6_1:22085962-22085981 | None:intergenic | 35.0% | |
| TTTGGACTATGGTGAGAAAA+TGG | - | chr6_1:22086055-22086074 | Msa0879550:intron | 35.0% | |
| AAAGTAGTGTTGTCGAATAG+TGG | - | chr6_1:22086141-22086160 | Msa0879550:intron | 35.0% | |
| TACTTTGCGATATATCTCCA+TGG | - | chr6_1:22086202-22086221 | Msa0879550:intron | 35.0% | |
| TAGCCGCTATTTAACAACAT+CGG | + | chr6_1:22086256-22086275 | None:intergenic | 35.0% | |
| !!! | GTGGAAGTATTTTTTCCCAA+TGG | + | chr6_1:22086333-22086352 | None:intergenic | 35.0% |
| GACAACAAGAAAAGTTAAGG+TGG | + | chr6_1:22086352-22086371 | None:intergenic | 35.0% | |
| GTGGACAACAAGAAAAGTTA+AGG | + | chr6_1:22086355-22086374 | None:intergenic | 35.0% | |
| !! | TAACTTTTCTTGTTGTCCAC+AGG | - | chr6_1:22086355-22086374 | Msa0879550:intron | 35.0% |
| TGATGGGAAATGCCATAAAT+TGG | + | chr6_1:22086398-22086417 | None:intergenic | 35.0% | |
| CAACACTGTATAGAAGTGAT+GGG | + | chr6_1:22086414-22086433 | None:intergenic | 35.0% | |
| ACAACACTGTATAGAAGTGA+TGG | + | chr6_1:22086415-22086434 | None:intergenic | 35.0% | |
| GAGAACACTGATAGTATCTA+TGG | + | chr6_1:22086492-22086511 | None:intergenic | 35.0% | |
| ! | GAACAAATTGCTATTGTTCC+TGG | + | chr6_1:22086742-22086761 | None:intergenic | 35.0% |
| AAAAATCAGGGGGAAAAATG+GGG | + | chr6_1:22086875-22086894 | None:intergenic | 35.0% | |
| GAAAAATCAGGGGGAAAAAT+GGG | + | chr6_1:22086876-22086895 | None:intergenic | 35.0% | |
| TGAAAAATCAGGGGGAAAAA+TGG | + | chr6_1:22086877-22086896 | None:intergenic | 35.0% | |
| ! | AACAGTGTTGAAAAATCAGG+GGG | + | chr6_1:22086885-22086904 | None:intergenic | 35.0% |
| !!! | ACTTGATCAGTTTTGAGAGT+AGG | - | chr6_1:22086907-22086926 | Msa0879550:intron | 35.0% |
| ! | TTCTGAGTTTTTCGCCATAA+TGG | + | chr6_1:22087113-22087132 | None:intergenic | 35.0% |
| AGAACATGATAATCAGTAGG+AGG | + | chr6_1:22087158-22087177 | None:intergenic | 35.0% | |
| GACAGAACATGATAATCAGT+AGG | + | chr6_1:22087161-22087180 | None:intergenic | 35.0% | |
| ! | GCTTTACTTAGTTGATACGA+TGG | - | chr6_1:22087199-22087218 | Msa0879550:intron | 35.0% |
| ! | ATGGTAATGTCTTGATTCAG+AGG | - | chr6_1:22087218-22087237 | Msa0879550:intron | 35.0% |
| CACAACAATAAGGTTCAGTT+TGG | + | chr6_1:22087374-22087393 | None:intergenic | 35.0% | |
| CATCAAGAAGAGTCCATAAT+TGG | + | chr6_1:22087493-22087512 | None:intergenic | 35.0% | |
| TGTTAGAAGCAAATCAAACC+AGG | + | chr6_1:22087794-22087813 | None:intergenic | 35.0% | |
| AGAAACAACATTCGAAACAG+AGG | + | chr6_1:22088237-22088256 | None:intergenic | 35.0% | |
| TGAAATGACGGTGATTAGAA+TGG | - | chr6_1:22088256-22088275 | Msa0879550:intron | 35.0% | |
| !! | TTGTTGGATTAGTAGTAACC+GGG | + | chr6_1:22088406-22088425 | None:intergenic | 35.0% |
| TTACTGCATCTCAAATGAGA+TGG | - | chr6_1:22088474-22088493 | Msa0879550:intron | 35.0% | |
| TACTGCATCTCAAATGAGAT+GGG | - | chr6_1:22088475-22088494 | Msa0879550:intron | 35.0% | |
| CATCTGAGTTTGTGAACATA+CGG | + | chr6_1:22088797-22088816 | None:intergenic | 35.0% | |
| GTATGTTCACAAACTCAGAT+GGG | - | chr6_1:22088796-22088815 | Msa0879550:intron | 35.0% | |
| ! | CCGAAAACTTGATAGTCTTT+GGG | + | chr6_1:22088877-22088896 | None:intergenic | 35.0% |
| ! | CCCAAAGACTATCAAGTTTT+CGG | - | chr6_1:22088874-22088893 | Msa0879550:intron | 35.0% |
| ! | TCCGAAAACTTGATAGTCTT+TGG | + | chr6_1:22088878-22088897 | None:intergenic | 35.0% |
| AAATGTCACATAAGGCCTAT+TGG | + | chr6_1:22088918-22088937 | None:intergenic | 35.0% | |
| ! | TAGGCCTTATGTGACATTTA+AGG | - | chr6_1:22088919-22088938 | Msa0879550:intron | 35.0% |
| ! | ATCATGAGTTTCCTTTTGTG+GGG | + | chr6_1:22089011-22089030 | None:intergenic | 35.0% |
| ! | GAATCATGAGTTTCCTTTTG+TGG | + | chr6_1:22089013-22089032 | None:intergenic | 35.0% |
| AGGAAGAAGATAAACGGTTG+CGG | + | chr6_1:22084240-22084259 | None:intergenic | 40.0% | |
| TCTTCCTTATCATCTCCTTC+AGG | - | chr6_1:22084253-22084272 | Msa0879550:three_prime_UTR | 40.0% | |
| AGTTCTGTCTCCTTCAAAAG+TGG | - | chr6_1:22085170-22085189 | Msa0879550:intron | 40.0% | |
| AGACTGTTTGGGAGAACTTA+TGG | - | chr6_1:22085733-22085752 | Msa0879550:intron | 40.0% | |
| CAGCCGATGTTGTTAAATAG+CGG | - | chr6_1:22086250-22086269 | Msa0879550:intron | 40.0% | |
| !!! | AGTATTTTTTCCCAATGGCC+CGG | + | chr6_1:22086328-22086347 | None:intergenic | 40.0% |
| GGGAAATGCCATAAATTGGA+GGG | + | chr6_1:22086394-22086413 | None:intergenic | 40.0% | |
| TGGGAAATGCCATAAATTGG+AGG | + | chr6_1:22086395-22086414 | None:intergenic | 40.0% | |
| CTATCAGTGTTCTCATATGG+CGG | - | chr6_1:22086498-22086517 | Msa0879550:intron | 40.0% | |
| GTACAAAATAGCATATCGCC+AGG | - | chr6_1:22086721-22086740 | Msa0879550:intron | 40.0% | |
| ! | TTTAAAAGCCCACCGTTTTG+GGG | + | chr6_1:22086833-22086852 | None:intergenic | 40.0% |
| !! | CTTTAAAAGCCCACCGTTTT+GGG | + | chr6_1:22086834-22086853 | None:intergenic | 40.0% |
| !! | TCTTTAAAAGCCCACCGTTT+TGG | + | chr6_1:22086835-22086854 | None:intergenic | 40.0% |
| !!! | TGATCAGTTTTGAGAGTAGG+TGG | - | chr6_1:22086910-22086929 | Msa0879550:intron | 40.0% |
| TTTGAGAGTAGGTGGACAAA+CGG | - | chr6_1:22086918-22086937 | Msa0879550:intron | 40.0% | |
| AACGGTTAGACAGATTGTGA+AGG | - | chr6_1:22086936-22086955 | Msa0879550:intron | 40.0% | |
| CTTCGGATCATTGAAGAACT+GGG | + | chr6_1:22087683-22087702 | None:intergenic | 40.0% | |
| TCTTCGGATCATTGAAGAAC+TGG | + | chr6_1:22087684-22087703 | None:intergenic | 40.0% | |
| AGTTCTTCAATGATCCGAAG+AGG | - | chr6_1:22087683-22087702 | Msa0879550:intron | 40.0% | |
| GCAATACACGAAGAAGACAA+TGG | + | chr6_1:22088115-22088134 | None:intergenic | 40.0% | |
| ! | GTTCAGTGTACCAGTGTTTT+AGG | - | chr6_1:22088363-22088382 | Msa0879550:intron | 40.0% |
| CTAATCCAACAATCAAACCG+TGG | - | chr6_1:22088414-22088433 | Msa0879550:intron | 40.0% | |
| GATGCAGTAAATTGGGAAGA+CGG | + | chr6_1:22088464-22088483 | None:intergenic | 40.0% | |
| CAAATGAGATGGGCATCAAA+AGG | - | chr6_1:22088485-22088504 | Msa0879550:intron | 40.0% | |
| ! | ATCAAAAGGCACAACAACAG+AGG | - | chr6_1:22088499-22088518 | Msa0879550:intron | 40.0% |
| ACAATCCGAGGAAGGAAAAA+AGG | - | chr6_1:22088559-22088578 | Msa0879550:intron | 40.0% | |
| GATGTCATGAAGGTTATGAC+CGG | + | chr6_1:22088680-22088699 | None:intergenic | 40.0% | |
| TGAGGATGACATTACTGTCA+GGG | + | chr6_1:22088703-22088722 | None:intergenic | 40.0% | |
| TTGAGGATGACATTACTGTC+AGG | + | chr6_1:22088704-22088723 | None:intergenic | 40.0% | |
| TGACAGTAATGTCATCCTCA+AGG | - | chr6_1:22088703-22088722 | Msa0879550:intron | 40.0% | |
| GACAGTAATGTCATCCTCAA+GGG | - | chr6_1:22088704-22088723 | Msa0879550:intron | 40.0% | |
| CGTATGTTCACAAACTCAGA+TGG | - | chr6_1:22088795-22088814 | Msa0879550:intron | 40.0% | |
| CACAGAACACTGTCACAATA+AGG | - | chr6_1:22088967-22088986 | Msa0879550:intron | 40.0% | |
| AATCCAACCACATCTACACA+TGG | + | chr6_1:22089094-22089113 | None:intergenic | 40.0% | |
| TGTGTAGATGTGGTTGGATT+TGG | - | chr6_1:22089094-22089113 | Msa0879550:intron | 40.0% | |
| CATGATAGCATGAACCCTTT+AGG | - | chr6_1:22089152-22089171 | Msa0879550:intron | 40.0% | |
| GGAAGAAGATAAACGGTTGC+GGG | + | chr6_1:22084239-22084258 | None:intergenic | 45.0% | |
| GGAACCTGAAGGAGATGATA+AGG | + | chr6_1:22084260-22084279 | None:intergenic | 45.0% | |
| AGAGTGAGATTGGAACCTGA+AGG | + | chr6_1:22084271-22084290 | None:intergenic | 45.0% | |
| GTAGAGAGAGAGAGTGAGAT+TGG | + | chr6_1:22084281-22084300 | None:intergenic | 45.0% | |
| !! | TAGTGGCTTTAGGGCATGTT+TGG | - | chr6_1:22085668-22085687 | Msa0879550:intron | 45.0% |
| CATATTTCCAGCAGTTCTCC+AGG | - | chr6_1:22085791-22085810 | Msa0879550:intron | 45.0% | |
| GCAGTTGTCATAAGCTATCC+TGG | + | chr6_1:22085812-22085831 | None:intergenic | 45.0% | |
| CTACGTACTGAGCTAAAGCA+AGG | - | chr6_1:22085969-22085988 | Msa0879550:intron | 45.0% | |
| ATAGTGGTTATAGCGCGTAG+CGG | - | chr6_1:22086157-22086176 | Msa0879550:intron | 45.0% | |
| CAACAGTCTGCACTAAACCA+TGG | + | chr6_1:22086222-22086241 | None:intergenic | 45.0% | |
| AGTTGCAATTACAGCCTTGC+CGG | - | chr6_1:22086306-22086325 | Msa0879550:intron | 45.0% | |
| !! | CTTTTCTTGTTGTCCACAGG+AGG | - | chr6_1:22086358-22086377 | Msa0879550:intron | 45.0% |
| GGGAGAAAAATATCCTCCTG+TGG | + | chr6_1:22086374-22086393 | None:intergenic | 45.0% | |
| CAAATTCCGCTATGCTATGG+CGG | + | chr6_1:22086540-22086559 | None:intergenic | 45.0% | |
| CTCCAAATTCCGCTATGCTA+TGG | + | chr6_1:22086543-22086562 | None:intergenic | 45.0% | |
| !! | GCGGTGCTATTGTGAAAAAG+CGG | + | chr6_1:22086686-22086705 | None:intergenic | 45.0% |
| ATCCAAAGATGGAAGGGTCA+TGG | + | chr6_1:22087028-22087047 | None:intergenic | 45.0% | |
| !! | TAGGAGGCATCCAACTAAAG+AGG | + | chr6_1:22087142-22087161 | None:intergenic | 45.0% |
| TAGGGAGATGAACACCTCTT+CGG | + | chr6_1:22087700-22087719 | None:intergenic | 45.0% | |
| ! | GAGGTGTTCATCTCCCTAAT+TGG | - | chr6_1:22087702-22087721 | Msa0879550:intron | 45.0% |
| GTAAAGTGAATCACGAGTCC+TGG | - | chr6_1:22087773-22087792 | Msa0879550:intron | 45.0% | |
| ATGTGGAGGACCTAAAACAC+TGG | + | chr6_1:22088376-22088395 | None:intergenic | 45.0% | |
| !! | TGTTTTAGGTCCTCCACATC+CGG | - | chr6_1:22088377-22088396 | Msa0879550:intron | 45.0% |
| TTGCTCCACGGTTTGATTGT+TGG | + | chr6_1:22088422-22088441 | None:intergenic | 45.0% | |
| GAGGAAGACAAGATCAGCAT+TGG | - | chr6_1:22088518-22088537 | Msa0879550:intron | 45.0% | |
| !!! | GGTGTCCTTTTTTCCTTCCT+CGG | + | chr6_1:22088567-22088586 | None:intergenic | 45.0% |
| GACACCGCAGTTTACTACTA+CGG | - | chr6_1:22088581-22088600 | Msa0879550:intron | 45.0% | |
| TGGACCGTAGTAGTAAACTG+CGG | + | chr6_1:22088588-22088607 | None:intergenic | 45.0% | |
| !! | TCTCTCAACTTGCTGTCTCT+CGG | - | chr6_1:22088643-22088662 | Msa0879550:intron | 45.0% |
| GAGGATGACATTACTGTCAG+GGG | + | chr6_1:22088702-22088721 | None:intergenic | 45.0% | |
| GACAAACCAGTGAAGGATAG+CGG | + | chr6_1:22088771-22088790 | None:intergenic | 45.0% | |
| TCGAGGTTGAGATGTTGTCA+TGG | - | chr6_1:22088837-22088856 | Msa0879550:intron | 45.0% | |
| GGTTGAGATGTTGTCATGGT+TGG | - | chr6_1:22088841-22088860 | Msa0879550:intron | 45.0% | |
| GCTTTAGCCATGTGTAGATG+TGG | - | chr6_1:22089084-22089103 | Msa0879550:intron | 45.0% | |
| TAGCCATGTGTAGATGTGGT+TGG | - | chr6_1:22089088-22089107 | Msa0879550:intron | 45.0% | |
| !! | TAAAAATAAAGTAAAATTAA+CGG | + | chr6_1:22088297-22088316 | None:intergenic | 5.0% |
| AACGGTTGCGGGTTTGTGAT+CGG | + | chr6_1:22084228-22084247 | None:intergenic | 50.0% | |
| AAGCTATCCTGGAGAACTGC+TGG | + | chr6_1:22085801-22085820 | None:intergenic | 50.0% | |
| GTTGCAATTACAGCCTTGCC+GGG | - | chr6_1:22086307-22086326 | Msa0879550:intron | 50.0% | |
| GCTATTCCGCCATAGCATAG+CGG | - | chr6_1:22086531-22086550 | Msa0879550:intron | 50.0% | |
| ! | CGCCATAGCATAGCGGAATT+TGG | - | chr6_1:22086538-22086557 | Msa0879550:intron | 50.0% |
| GGAAGAGAACTGCCCCAAAA+CGG | - | chr6_1:22086818-22086837 | Msa0879550:intron | 50.0% | |
| TGCCATGACCCTTCCATCTT+TGG | - | chr6_1:22087023-22087042 | Msa0879550:intron | 50.0% | |
| ATTAGTAGTAACCGGGCGTC+CGG | + | chr6_1:22088399-22088418 | None:intergenic | 50.0% | |
| GCTGGATTTGCATTGCTCCA+CGG | + | chr6_1:22088434-22088453 | None:intergenic | 50.0% | |
| TGGGAAGACGGCTTATATGC+TGG | + | chr6_1:22088452-22088471 | None:intergenic | 50.0% | |
| GATTGTTGTACTCCACTGGC+AGG | + | chr6_1:22088545-22088564 | None:intergenic | 50.0% | |
| CTCGGATTGTTGTACTCCAC+TGG | + | chr6_1:22088549-22088568 | None:intergenic | 50.0% | |
| CAGTGGAGTACAACAATCCG+AGG | - | chr6_1:22088547-22088566 | Msa0879550:intron | 50.0% | |
| GGAGTACAACAATCCGAGGA+AGG | - | chr6_1:22088551-22088570 | Msa0879550:intron | 50.0% | |
| TGCTGTCTCTCGGTATCTCT+CGG | - | chr6_1:22088653-22088672 | Msa0879550:intron | 50.0% | |
| ACTGTCAGGGGATGTCATGA+AGG | + | chr6_1:22088690-22088709 | None:intergenic | 50.0% | |
| CTACAACCGCTATCCTTCAC+TGG | - | chr6_1:22088762-22088781 | Msa0879550:intron | 50.0% | |
| ! | ACGGACTGACAAACCAGTGA+AGG | + | chr6_1:22088778-22088797 | None:intergenic | 50.0% |
| CACAAACTCAGATGGGAACC+CGG | - | chr6_1:22088803-22088822 | Msa0879550:intron | 50.0% | |
| AACCTCGAAGCTGTCTGAAC+CGG | + | chr6_1:22088825-22088844 | None:intergenic | 50.0% | |
| TTCGTCCAGCTGACACCAAT+AGG | - | chr6_1:22088900-22088919 | Msa0879550:intron | 50.0% | |
| !! | TAAGGCCTATTGGTGTCAGC+TGG | + | chr6_1:22088908-22088927 | None:intergenic | 50.0% |
| TGCTAGACTCACCCCACAAA+AGG | - | chr6_1:22088997-22089016 | Msa0879550:intron | 50.0% | |
| ! | TTTTTCCCAATGGCCCGGCA+AGG | + | chr6_1:22086323-22086342 | None:intergenic | 55.0% |
| AGAGAACTGCCCCAAAACGG+TGG | - | chr6_1:22086821-22086840 | Msa0879550:intron | 55.0% | |
| GAGAACTGCCCCAAAACGGT+GGG | - | chr6_1:22086822-22086841 | Msa0879550:intron | 55.0% | |
| ! | ATCAGCATTGGACCTGCCAG+TGG | - | chr6_1:22088530-22088549 | Msa0879550:intron | 55.0% |
| TCTCTCGGTATCTCTCGGTC+CGG | - | chr6_1:22088658-22088677 | Msa0879550:intron | 55.0% | |
| ! | TGTCATCCTCAAGGGTGCAG+TGG | - | chr6_1:22088712-22088731 | Msa0879550:intron | 55.0% |
| ATGATGCCACTGCACCCTTG+AGG | + | chr6_1:22088721-22088740 | None:intergenic | 55.0% | |
| ACCTCGAAGCTGTCTGAACC+GGG | + | chr6_1:22088824-22088843 | None:intergenic | 55.0% | |
| TTACAGCCTTGCCGGGCCAT+TGG | - | chr6_1:22086314-22086333 | Msa0879550:intron | 60.0% | |
| TACAGCCTTGCCGGGCCATT+GGG | - | chr6_1:22086315-22086334 | Msa0879550:intron | 60.0% | |
| ACCCGGTTCAGACAGCTTCG+AGG | - | chr6_1:22088820-22088839 | Msa0879550:intron | 60.0% | |
| AGTAACCGGGCGTCCGGATG+TGG | + | chr6_1:22088393-22088412 | None:intergenic | 65.0% | |
| GTCCTCCACATCCGGACGCC+CGG | - | chr6_1:22088385-22088404 | Msa0879550:intron | 70.0% | |
| AACCGGGCGTCCGGATGTGG+AGG | + | chr6_1:22088390-22088409 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 22084144 | 22089314 | 22084144 | ID=Msa0879550;Name=Msa0879550 |
| chr6_1 | mRNA | 22084144 | 22089314 | 22084144 | ID=Msa0879550-mRNA-1;Parent=Msa0879550;Name=Msa0879550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=61|1|1|1|1|1|2|263|250 |
| chr6_1 | exon | 22084144 | 22085089 | 22084144 | ID=Msa0879550-mRNA-1:exon:5984;Parent=Msa0879550-mRNA-1 |
| chr6_1 | exon | 22089184 | 22089314 | 22089184 | ID=Msa0879550-mRNA-1:exon:5983;Parent=Msa0879550-mRNA-1 |
| chr6_1 | five_prime_UTR | 22089254 | 22089314 | 22089254 | ID=Msa0879550-mRNA-1:five_prime_utr;Parent=Msa0879550-mRNA-1 |
| chr6_1 | CDS | 22089184 | 22089253 | 22089184 | ID=Msa0879550-mRNA-1:cds;Parent=Msa0879550-mRNA-1 |
| chr6_1 | CDS | 22084407 | 22085089 | 22084407 | ID=Msa0879550-mRNA-1:cds;Parent=Msa0879550-mRNA-1 |
| chr6_1 | three_prime_UTR | 22084144 | 22084406 | 22084144 | ID=Msa0879550-mRNA-1:three_prime_utr;Parent=Msa0879550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
