Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa1085390 | 0.800332 | 1.514428e-48 | -8.615850e-47 |
| Msa0017510 | Msa1085390 | 0.852151 | 5.569930e-61 | -8.615850e-47 |
| Msa0029810 | Msa1085390 | 0.937402 | 3.671213e-98 | -8.615850e-47 |
| Msa0031340 | Msa1085390 | 0.805263 | 1.452442e-49 | -8.615850e-47 |
| Msa0091210 | Msa1085390 | -0.810198 | 1.298803e-50 | -8.615850e-47 |
| Msa0112750 | Msa1085390 | 0.814700 | 1.348294e-51 | -8.615850e-47 |
| Msa0657970 | Msa1085390 | 0.804859 | 1.764738e-49 | -8.615850e-47 |
| Msa0661870 | Msa1085390 | 0.806442 | 8.210412e-50 | -8.615850e-47 |
| Msa0122590 | Msa1085390 | 0.805968 | 1.032974e-49 | -8.615850e-47 |
| Msa0133130 | Msa1085390 | 0.801171 | 1.021329e-48 | -8.615850e-47 |
| Msa0140780 | Msa1085390 | 0.818113 | 2.321642e-52 | -8.615850e-47 |
| Msa0157290 | Msa1085390 | 0.851490 | 8.579873e-61 | -8.615850e-47 |
| Msa0173990 | Msa1085390 | 0.808297 | 3.318674e-50 | -8.615850e-47 |
| Msa0200260 | Msa1085390 | 0.806811 | 6.862386e-50 | -8.615850e-47 |
| Msa0208090 | Msa1085390 | 0.803636 | 3.171791e-49 | -8.615850e-47 |
| Msa0406120 | Msa1085390 | 0.802081 | 6.643883e-49 | -8.615850e-47 |
| Msa0431690 | Msa1085390 | 0.801977 | 6.979342e-49 | -8.615850e-47 |
| Msa0437990 | Msa1085390 | 0.803374 | 3.594084e-49 | -8.615850e-47 |
| Msa0452620 | Msa1085390 | 0.805832 | 1.103647e-49 | -8.615850e-47 |
| Msa0990960 | Msa1085390 | 0.807768 | 4.301607e-50 | -8.615850e-47 |
| Msa0998690 | Msa1085390 | 0.802511 | 5.418931e-49 | -8.615850e-47 |
| Msa1014540 | Msa1085390 | 0.827400 | 1.597422e-54 | -8.615850e-47 |
| Msa1024240 | Msa1085390 | 0.810689 | 1.017463e-50 | -8.615850e-47 |
| Msa1044420 | Msa1085390 | 0.807571 | 4.736251e-50 | -8.615850e-47 |
| Msa1082500 | Msa1085390 | 0.805280 | 1.440757e-49 | -8.615850e-47 |
| Msa1085390 | Msa1124050 | 0.808885 | 2.485515e-50 | -8.615850e-47 |
| Msa1085390 | Msa1160670 | 0.813802 | 2.128558e-51 | -8.615850e-47 |
| Msa1085390 | Msa1172670 | 0.806551 | 7.787152e-50 | -8.615850e-47 |
| Msa1085390 | Msa1179460 | 0.807993 | 3.852985e-50 | -8.615850e-47 |
| Msa1085390 | Msa1249490 | 0.802605 | 5.183511e-49 | -8.615850e-47 |
| Msa1085390 | Msa1284680 | 0.802746 | 4.845696e-49 | -8.615850e-47 |
| Msa1085390 | Msa1289280 | 0.804196 | 2.426046e-49 | -8.615850e-47 |
| Msa1085390 | Msa1344130 | 0.813512 | 2.465735e-51 | -8.615850e-47 |
| Msa1085390 | Msa1420140 | 0.801134 | 1.039206e-48 | -8.615850e-47 |
| Msa1085390 | Msa1438250 | 0.820051 | 8.411224e-53 | -8.615850e-47 |
| Msa0243100 | Msa1085390 | 0.845113 | 4.972017e-59 | -8.615850e-47 |
| Msa0257460 | Msa1085390 | 0.811208 | 7.852687e-51 | -8.615850e-47 |
| Msa0287650 | Msa1085390 | 0.819518 | 1.113324e-52 | -8.615850e-47 |
| Msa0288100 | Msa1085390 | 0.805465 | 1.317464e-49 | -8.615850e-47 |
| Msa0336040 | Msa1085390 | -0.801439 | 8.999990e-49 | -8.615850e-47 |
| Msa0483650 | Msa1085390 | 0.804483 | 2.113689e-49 | -8.615850e-47 |
| Msa0498650 | Msa1085390 | 0.805273 | 1.445841e-49 | -8.615850e-47 |
| Msa0512900 | Msa1085390 | 0.817948 | 2.530288e-52 | -8.615850e-47 |
| Msa0880140 | Msa1085390 | 0.849063 | 4.113082e-60 | -8.615850e-47 |
| Msa0880340 | Msa1085390 | 0.947364 | 7.764618e-106 | -8.615850e-47 |
| Msa0885280 | Msa1085390 | 0.810979 | 8.802570e-51 | -8.615850e-47 |
| Msa0907070 | Msa1085390 | 0.800064 | 1.717283e-48 | -8.615850e-47 |
| Msa0922720 | Msa1085390 | 0.826935 | 2.064388e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 11 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGAGAATGTCATTAAATT+TGG | 0.171054 | 7_2:+86069532 | None:intergenic |
| CTTCTGCATATGGATCCTTT+TGG | 0.279760 | 7_2:-86069501 | Msa1085390:CDS |
| GTTTATTACAGAGTTGGATA+TGG | 0.319512 | 7_2:-86069598 | Msa1085390:intron |
| GGGGAGGATGCTTGAATAAG+AGG | 0.376419 | 7_2:+86069464 | None:intergenic |
| GTATAATTGTCTTCTGCATA+TGG | 0.387682 | 7_2:-86069511 | Msa1085390:CDS |
| TATGGAAAAGTGGTTGGAGC+TGG | 0.462385 | 7_2:-86070313 | Msa1085390:intron |
| TTTAGTGTATAGTTAGAAAG+GGG | 0.507137 | 7_2:+86069445 | None:intergenic |
| ATGCATAGTTTGCTAACTTG+TGG | 0.540764 | 7_2:+86070357 | None:intergenic |
| AGTGTATAGTTAGAAAGGGG+AGG | 0.548704 | 7_2:+86069448 | None:intergenic |
| ACAAGTTAGCAAACTATGCA+TGG | 0.605098 | 7_2:-86070355 | Msa1085390:CDS |
| AGTTAGCAAACTATGCATGG+CGG | 0.782698 | 7_2:-86070352 | Msa1085390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCATTTTTATGGAAAAG+TGG | - | chr7_2:86069795-86069814 | Msa1085390:intron | 20.0% |
| !!! | CCTTGAATTGATTTTTTAAA+GGG | - | chr7_2:86069943-86069962 | Msa1085390:intron | 20.0% |
| !! | ATAATAACTACACACAAAAA+AGG | + | chr7_2:86070129-86070148 | None:intergenic | 20.0% |
| !!! | TTATTTCTTAAACCTATTTG+TGG | - | chr7_2:86070158-86070177 | Msa1085390:intron | 20.0% |
| !!! | ACAATTATTATAGTTGGTTT+TGG | - | chr7_2:86070360-86070379 | Msa1085390:CDS | 20.0% |
| !!! | AATTCATTTTTATGGAAAAG+TGG | - | chr7_2:86069795-86069814 | Msa1085390:intron | 20.0% |
| !!! | CCTTGAATTGATTTTTTAAA+GGG | - | chr7_2:86069943-86069962 | Msa1085390:intron | 20.0% |
| !! | ATAATAACTACACACAAAAA+AGG | + | chr7_2:86070129-86070148 | None:intergenic | 20.0% |
| !!! | TTATTTCTTAAACCTATTTG+TGG | - | chr7_2:86070158-86070177 | Msa1085390:intron | 20.0% |
| !!! | ACAATTATTATAGTTGGTTT+TGG | - | chr7_2:86070360-86070379 | Msa1085390:CDS | 20.0% |
| ! | TAGAAGAAAAAGAAGTGAAT+GGG | + | chr7_2:86069499-86069518 | None:intergenic | 25.0% |
| ! | AATGAAGTCATGAATGTAAA+TGG | + | chr7_2:86069543-86069562 | None:intergenic | 25.0% |
| ! | ATGCAAAGAAGGAAAAAAAA+AGG | + | chr7_2:86069598-86069617 | None:intergenic | 25.0% |
| ! | ATTTAGATTTAGTGCTTATG+TGG | - | chr7_2:86069694-86069713 | Msa1085390:intron | 25.0% |
| ! | TGAAAATATTGCTATCATCT+TGG | - | chr7_2:86069721-86069740 | Msa1085390:intron | 25.0% |
| !!! | GGTTGAAGAATTCATTTTTA+TGG | - | chr7_2:86069787-86069806 | Msa1085390:intron | 25.0% |
| !! | TTCTCAAAGGTTTCTAAAAA+AGG | - | chr7_2:86069861-86069880 | Msa1085390:intron | 25.0% |
| !!! | GCCTTGAATTGATTTTTTAA+AGG | - | chr7_2:86069942-86069961 | Msa1085390:intron | 25.0% |
| !! | CCCTTTAAAAAATCAATTCA+AGG | + | chr7_2:86069946-86069965 | None:intergenic | 25.0% |
| ! | AGATGCAACTATTTCATTAA+AGG | + | chr7_2:86070017-86070036 | None:intergenic | 25.0% |
| !! | TAATAGTTTCACAAGAGTTT+TGG | - | chr7_2:86070078-86070097 | Msa1085390:intron | 25.0% |
| ! | TCCTCGATTAAATGAATTTA+AGG | - | chr7_2:86070262-86070281 | Msa1085390:intron | 25.0% |
| ! | ACCTTAAATTCATTTAATCG+AGG | + | chr7_2:86070266-86070285 | None:intergenic | 25.0% |
| ! | CATGCAACAATTATTATAGT+TGG | - | chr7_2:86070354-86070373 | Msa1085390:CDS | 25.0% |
| !!! | TTCAAAGTATTTTCATGCTT+TGG | - | chr7_2:86070412-86070431 | Msa1085390:intron | 25.0% |
| ! | ACTGAGAATGTCATTAAATT+TGG | + | chr7_2:86070589-86070608 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAAGAAGTGAAT+GGG | + | chr7_2:86069499-86069518 | None:intergenic | 25.0% |
| ! | AATGAAGTCATGAATGTAAA+TGG | + | chr7_2:86069543-86069562 | None:intergenic | 25.0% |
| ! | ATGCAAAGAAGGAAAAAAAA+AGG | + | chr7_2:86069598-86069617 | None:intergenic | 25.0% |
| ! | ATTTAGATTTAGTGCTTATG+TGG | - | chr7_2:86069694-86069713 | Msa1085390:intron | 25.0% |
| ! | TGAAAATATTGCTATCATCT+TGG | - | chr7_2:86069721-86069740 | Msa1085390:intron | 25.0% |
| !!! | GGTTGAAGAATTCATTTTTA+TGG | - | chr7_2:86069787-86069806 | Msa1085390:intron | 25.0% |
| !! | TTCTCAAAGGTTTCTAAAAA+AGG | - | chr7_2:86069861-86069880 | Msa1085390:intron | 25.0% |
| !!! | GCCTTGAATTGATTTTTTAA+AGG | - | chr7_2:86069942-86069961 | Msa1085390:intron | 25.0% |
| !! | CCCTTTAAAAAATCAATTCA+AGG | + | chr7_2:86069946-86069965 | None:intergenic | 25.0% |
| ! | AGATGCAACTATTTCATTAA+AGG | + | chr7_2:86070017-86070036 | None:intergenic | 25.0% |
| !! | TAATAGTTTCACAAGAGTTT+TGG | - | chr7_2:86070078-86070097 | Msa1085390:intron | 25.0% |
| ! | TCCTCGATTAAATGAATTTA+AGG | - | chr7_2:86070262-86070281 | Msa1085390:intron | 25.0% |
| ! | ACCTTAAATTCATTTAATCG+AGG | + | chr7_2:86070266-86070285 | None:intergenic | 25.0% |
| ! | CATGCAACAATTATTATAGT+TGG | - | chr7_2:86070354-86070373 | Msa1085390:CDS | 25.0% |
| !!! | TTCAAAGTATTTTCATGCTT+TGG | - | chr7_2:86070412-86070431 | Msa1085390:intron | 25.0% |
| ! | ACTGAGAATGTCATTAAATT+TGG | + | chr7_2:86070589-86070608 | None:intergenic | 25.0% |
| GTAGAAGAAAAAGAAGTGAA+TGG | + | chr7_2:86069500-86069519 | None:intergenic | 30.0% | |
| TTTGTGATAAATGATTCTGC+AGG | + | chr7_2:86069634-86069653 | None:intergenic | 30.0% | |
| ! | CATTTTTATGGAAAAGTGGT+TGG | - | chr7_2:86069799-86069818 | Msa1085390:intron | 30.0% |
| GCTGAATTGAAATTTCTCAA+AGG | - | chr7_2:86069848-86069867 | Msa1085390:intron | 30.0% | |
| !! | CTATCTTTATCCACTTTTCA+TGG | - | chr7_2:86069968-86069987 | Msa1085390:intron | 30.0% |
| ATAGAACAATCCATGAAAAG+TGG | + | chr7_2:86069981-86070000 | None:intergenic | 30.0% | |
| !!! | AGTTGTTTTAGTGTCATTGT+TGG | - | chr7_2:86070054-86070073 | Msa1085390:intron | 30.0% |
| !!! | GTTGTTTTAGTGTCATTGTT+GGG | - | chr7_2:86070055-86070074 | Msa1085390:intron | 30.0% |
| ! | AAAAGAGTACAACCACAAAT+AGG | + | chr7_2:86070173-86070192 | None:intergenic | 30.0% |
| TTTGCATTCAAAATTGTCCT+TGG | + | chr7_2:86070327-86070346 | None:intergenic | 30.0% | |
| !!! | TTATTATAGTTGGTTTTGGC+TGG | - | chr7_2:86070364-86070383 | Msa1085390:CDS | 30.0% |
| !! | TTTCATGCTTTGGAATGTAA+AGG | - | chr7_2:86070422-86070441 | Msa1085390:intron | 30.0% |
| TCCTTAGTTTATTACAGAGT+TGG | - | chr7_2:86070514-86070533 | Msa1085390:intron | 30.0% | |
| TCCAACTCTGTAATAAACTA+AGG | + | chr7_2:86070518-86070537 | None:intergenic | 30.0% | |
| GTTTATTACAGAGTTGGATA+TGG | - | chr7_2:86070520-86070539 | Msa1085390:intron | 30.0% | |
| GTATAATTGTCTTCTGCATA+TGG | - | chr7_2:86070607-86070626 | Msa1085390:intron | 30.0% | |
| ! | GATTTAGTGATTTTCCCAAA+AGG | + | chr7_2:86070635-86070654 | None:intergenic | 30.0% |
| GTAGAAGAAAAAGAAGTGAA+TGG | + | chr7_2:86069500-86069519 | None:intergenic | 30.0% | |
| TTTGTGATAAATGATTCTGC+AGG | + | chr7_2:86069634-86069653 | None:intergenic | 30.0% | |
| ! | CATTTTTATGGAAAAGTGGT+TGG | - | chr7_2:86069799-86069818 | Msa1085390:intron | 30.0% |
| GCTGAATTGAAATTTCTCAA+AGG | - | chr7_2:86069848-86069867 | Msa1085390:intron | 30.0% | |
| !! | CTATCTTTATCCACTTTTCA+TGG | - | chr7_2:86069968-86069987 | Msa1085390:intron | 30.0% |
| ATAGAACAATCCATGAAAAG+TGG | + | chr7_2:86069981-86070000 | None:intergenic | 30.0% | |
| !!! | AGTTGTTTTAGTGTCATTGT+TGG | - | chr7_2:86070054-86070073 | Msa1085390:intron | 30.0% |
| !!! | GTTGTTTTAGTGTCATTGTT+GGG | - | chr7_2:86070055-86070074 | Msa1085390:intron | 30.0% |
| ! | AAAAGAGTACAACCACAAAT+AGG | + | chr7_2:86070173-86070192 | None:intergenic | 30.0% |
| TTTGCATTCAAAATTGTCCT+TGG | + | chr7_2:86070327-86070346 | None:intergenic | 30.0% | |
| !!! | TTATTATAGTTGGTTTTGGC+TGG | - | chr7_2:86070364-86070383 | Msa1085390:CDS | 30.0% |
| !! | TTTCATGCTTTGGAATGTAA+AGG | - | chr7_2:86070422-86070441 | Msa1085390:intron | 30.0% |
| TCCTTAGTTTATTACAGAGT+TGG | - | chr7_2:86070514-86070533 | Msa1085390:intron | 30.0% | |
| TCCAACTCTGTAATAAACTA+AGG | + | chr7_2:86070518-86070537 | None:intergenic | 30.0% | |
| GTTTATTACAGAGTTGGATA+TGG | - | chr7_2:86070520-86070539 | Msa1085390:intron | 30.0% | |
| GTATAATTGTCTTCTGCATA+TGG | - | chr7_2:86070607-86070626 | Msa1085390:intron | 30.0% | |
| ! | GATTTAGTGATTTTCCCAAA+AGG | + | chr7_2:86070635-86070654 | None:intergenic | 30.0% |
| ! | TTGAGATTTGAGATCAAGAG+AGG | + | chr7_2:86069572-86069591 | None:intergenic | 35.0% |
| TTTGATCTAGCATGCAAAGA+AGG | + | chr7_2:86069609-86069628 | None:intergenic | 35.0% | |
| !! | TGCTATCATCTTGGTTTGTT+AGG | - | chr7_2:86069730-86069749 | Msa1085390:intron | 35.0% |
| !! | ATGCATAGTTTGCTAACTTG+TGG | + | chr7_2:86069764-86069783 | None:intergenic | 35.0% |
| ACAAGTTAGCAAACTATGCA+TGG | - | chr7_2:86069763-86069782 | Msa1085390:intron | 35.0% | |
| TACACCTTGAATTGAAACCA+AGG | - | chr7_2:86069909-86069928 | Msa1085390:intron | 35.0% | |
| ACACCTTGAATTGAAACCAA+GGG | - | chr7_2:86069910-86069929 | Msa1085390:intron | 35.0% | |
| AAACCCTTGGTTTCAATTCA+AGG | + | chr7_2:86069916-86069935 | None:intergenic | 35.0% | |
| GATGGAAGTCCACAATTATA+TGG | - | chr7_2:86070229-86070248 | Msa1085390:intron | 35.0% | |
| !! | TAAAGGTATTGATGCTCTGT+TGG | - | chr7_2:86070439-86070458 | Msa1085390:intron | 35.0% |
| ! | TTCTGCATATGGATCCTTTT+GGG | - | chr7_2:86070618-86070637 | Msa1085390:intron | 35.0% |
| ! | TTGAGATTTGAGATCAAGAG+AGG | + | chr7_2:86069572-86069591 | None:intergenic | 35.0% |
| TTTGATCTAGCATGCAAAGA+AGG | + | chr7_2:86069609-86069628 | None:intergenic | 35.0% | |
| !! | TGCTATCATCTTGGTTTGTT+AGG | - | chr7_2:86069730-86069749 | Msa1085390:intron | 35.0% |
| !! | ATGCATAGTTTGCTAACTTG+TGG | + | chr7_2:86069764-86069783 | None:intergenic | 35.0% |
| ACAAGTTAGCAAACTATGCA+TGG | - | chr7_2:86069763-86069782 | Msa1085390:intron | 35.0% | |
| TACACCTTGAATTGAAACCA+AGG | - | chr7_2:86069909-86069928 | Msa1085390:intron | 35.0% | |
| ACACCTTGAATTGAAACCAA+GGG | - | chr7_2:86069910-86069929 | Msa1085390:intron | 35.0% | |
| AAACCCTTGGTTTCAATTCA+AGG | + | chr7_2:86069916-86069935 | None:intergenic | 35.0% | |
| GATGGAAGTCCACAATTATA+TGG | - | chr7_2:86070229-86070248 | Msa1085390:intron | 35.0% | |
| !! | TAAAGGTATTGATGCTCTGT+TGG | - | chr7_2:86070439-86070458 | Msa1085390:intron | 35.0% |
| ! | TTCTGCATATGGATCCTTTT+GGG | - | chr7_2:86070618-86070637 | Msa1085390:intron | 35.0% |
| GGCAAACGAAAATGTAGAAC+AGG | + | chr7_2:86069522-86069541 | None:intergenic | 40.0% | |
| AGTTAGCAAACTATGCATGG+CGG | - | chr7_2:86069766-86069785 | Msa1085390:intron | 40.0% | |
| TCAAGGCAAAGTAAAACCCT+TGG | + | chr7_2:86069929-86069948 | None:intergenic | 40.0% | |
| TGCACAAAGTCATGGTAGAA+AGG | + | chr7_2:86070198-86070217 | None:intergenic | 40.0% | |
| TCTACCATGACTTTGTGCAA+AGG | - | chr7_2:86070199-86070218 | Msa1085390:intron | 40.0% | |
| CATTCCTTTGCACAAAGTCA+TGG | + | chr7_2:86070206-86070225 | None:intergenic | 40.0% | |
| TGACTTTGTGCAAAGGAATG+TGG | - | chr7_2:86070206-86070225 | Msa1085390:intron | 40.0% | |
| GACTTTGTGCAAAGGAATGT+GGG | - | chr7_2:86070207-86070226 | Msa1085390:intron | 40.0% | |
| CTTGCAGCACCATATAATTG+TGG | + | chr7_2:86070241-86070260 | None:intergenic | 40.0% | |
| TTGGCTGGAATGAAAGACAA+TGG | - | chr7_2:86070379-86070398 | Msa1085390:intron | 40.0% | |
| ! | ATTGATGCTCTGTTGGTGTT+TGG | - | chr7_2:86070446-86070465 | Msa1085390:intron | 40.0% |
| ! | CTTCTGCATATGGATCCTTT+TGG | - | chr7_2:86070617-86070636 | Msa1085390:intron | 40.0% |
| GGCAAACGAAAATGTAGAAC+AGG | + | chr7_2:86069522-86069541 | None:intergenic | 40.0% | |
| AGTTAGCAAACTATGCATGG+CGG | - | chr7_2:86069766-86069785 | Msa1085390:intron | 40.0% | |
| TCAAGGCAAAGTAAAACCCT+TGG | + | chr7_2:86069929-86069948 | None:intergenic | 40.0% | |
| TGCACAAAGTCATGGTAGAA+AGG | + | chr7_2:86070198-86070217 | None:intergenic | 40.0% | |
| TCTACCATGACTTTGTGCAA+AGG | - | chr7_2:86070199-86070218 | Msa1085390:intron | 40.0% | |
| CATTCCTTTGCACAAAGTCA+TGG | + | chr7_2:86070206-86070225 | None:intergenic | 40.0% | |
| TGACTTTGTGCAAAGGAATG+TGG | - | chr7_2:86070206-86070225 | Msa1085390:intron | 40.0% | |
| GACTTTGTGCAAAGGAATGT+GGG | - | chr7_2:86070207-86070226 | Msa1085390:intron | 40.0% | |
| CTTGCAGCACCATATAATTG+TGG | + | chr7_2:86070241-86070260 | None:intergenic | 40.0% | |
| TTGGCTGGAATGAAAGACAA+TGG | - | chr7_2:86070379-86070398 | Msa1085390:intron | 40.0% | |
| ! | ATTGATGCTCTGTTGGTGTT+TGG | - | chr7_2:86070446-86070465 | Msa1085390:intron | 40.0% |
| ! | CTTCTGCATATGGATCCTTT+TGG | - | chr7_2:86070617-86070636 | Msa1085390:intron | 40.0% |
| ! | GATTTGAGATCAAGAGAGGC+TGG | + | chr7_2:86069568-86069587 | None:intergenic | 45.0% |
| TATGGAAAAGTGGTTGGAGC+TGG | - | chr7_2:86069805-86069824 | Msa1085390:intron | 45.0% | |
| TTGTGCAAAGGAATGTGGGA+TGG | - | chr7_2:86070211-86070230 | Msa1085390:intron | 45.0% | |
| ! | GATTTGAGATCAAGAGAGGC+TGG | + | chr7_2:86069568-86069587 | None:intergenic | 45.0% |
| TATGGAAAAGTGGTTGGAGC+TGG | - | chr7_2:86069805-86069824 | Msa1085390:intron | 45.0% | |
| TTGTGCAAAGGAATGTGGGA+TGG | - | chr7_2:86070211-86070230 | Msa1085390:intron | 45.0% | |
| GATTCATCGTCGTGAGACCA+AGG | - | chr7_2:86070307-86070326 | Msa1085390:intron | 50.0% | |
| GGGGAGGATGCTTGAATAAG+AGG | + | chr7_2:86070657-86070676 | None:intergenic | 50.0% | |
| GATTCATCGTCGTGAGACCA+AGG | - | chr7_2:86070307-86070326 | Msa1085390:intron | 50.0% | |
| GGGGAGGATGCTTGAATAAG+AGG | + | chr7_2:86070657-86070676 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86069457 | 86070683 | 86069457 | ID=Msa1085390;Name=Msa1085390 |
| chr7_2 | mRNA | 86069457 | 86070683 | 86069457 | ID=Msa1085390-mRNA-1;Parent=Msa1085390;Name=Msa1085390-mRNA-1;_AED=0.56;_eAED=0.77;_QI=0|0|0|1|0.5|0.66|3|0|77 |
| chr7_2 | exon | 86070678 | 86070683 | 86070678 | ID=Msa1085390-mRNA-1:exon:23282;Parent=Msa1085390-mRNA-1 |
| chr7_2 | exon | 86070314 | 86070388 | 86070314 | ID=Msa1085390-mRNA-1:exon:23281;Parent=Msa1085390-mRNA-1 |
| chr7_2 | exon | 86069457 | 86069609 | 86069457 | ID=Msa1085390-mRNA-1:exon:23280;Parent=Msa1085390-mRNA-1 |
| chr7_2 | CDS | 86070678 | 86070683 | 86070678 | ID=Msa1085390-mRNA-1:cds;Parent=Msa1085390-mRNA-1 |
| chr7_2 | CDS | 86070314 | 86070388 | 86070314 | ID=Msa1085390-mRNA-1:cds;Parent=Msa1085390-mRNA-1 |
| chr7_2 | CDS | 86069457 | 86069609 | 86069457 | ID=Msa1085390-mRNA-1:cds;Parent=Msa1085390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
