Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344130 | KEH43985.1 | 49.057 | 106 | 17 | 3 | 1 | 72 | 1 | 103 | 8.47e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344130 | A0A072W123 | 49.057 | 106 | 17 | 3 | 1 | 72 | 1 | 103 | 4.05e-12 | 65.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1344130 | 0.800964 | 1.125811e-48 | -8.615850e-47 |
| Msa0006070 | Msa1344130 | 0.808526 | 2.965480e-50 | -8.615850e-47 |
| Msa0006110 | Msa1344130 | 0.810332 | 1.215089e-50 | -8.615850e-47 |
| Msa0011170 | Msa1344130 | 0.816634 | 4.999157e-52 | -8.615850e-47 |
| Msa0017510 | Msa1344130 | 0.830996 | 2.143641e-55 | -8.615850e-47 |
| Msa0037700 | Msa1344130 | 0.802259 | 6.107524e-49 | -8.615850e-47 |
| Msa0037880 | Msa1344130 | 0.805915 | 1.059857e-49 | -8.615850e-47 |
| Msa0043980 | Msa1344130 | 0.810452 | 1.144698e-50 | -8.615850e-47 |
| Msa0052800 | Msa1344130 | 0.816853 | 4.464092e-52 | -8.615850e-47 |
| Msa0054260 | Msa1344130 | 0.807155 | 5.803636e-50 | -8.615850e-47 |
| Msa0054310 | Msa1344130 | 0.811447 | 6.970362e-51 | -8.615850e-47 |
| Msa0062860 | Msa1344130 | 0.806387 | 8.430231e-50 | -8.615850e-47 |
| Msa0075880 | Msa1344130 | 0.812489 | 4.132429e-51 | -8.615850e-47 |
| Msa0084380 | Msa1344130 | 0.804145 | 2.486293e-49 | -8.615850e-47 |
| Msa0085290 | Msa1344130 | 0.800870 | 1.176476e-48 | -8.615850e-47 |
| Msa0086650 | Msa1344130 | 0.819843 | 9.387206e-53 | -8.615850e-47 |
| Msa0091210 | Msa1344130 | -0.829339 | 5.440905e-55 | -8.615850e-47 |
| Msa0095560 | Msa1344130 | 0.810854 | 9.370809e-51 | -8.615850e-47 |
| Msa0100090 | Msa1344130 | 0.837183 | 6.041876e-57 | -8.615850e-47 |
| Msa0104800 | Msa1344130 | 0.827808 | 1.274938e-54 | -8.615850e-47 |
| Msa0105070 | Msa1344130 | 0.800018 | 1.754889e-48 | -8.615850e-47 |
| Msa0112750 | Msa1344130 | 0.823663 | 1.226779e-53 | -8.615850e-47 |
| Msa0114060 | Msa1344130 | 0.825603 | 4.283888e-54 | -8.615850e-47 |
| Msa0607050 | Msa1344130 | 0.807760 | 4.317815e-50 | -8.615850e-47 |
| Msa0607540 | Msa1344130 | 0.815388 | 9.481986e-52 | -8.615850e-47 |
| Msa0608620 | Msa1344130 | 0.829255 | 5.701309e-55 | -8.615850e-47 |
| Msa0610430 | Msa1344130 | 0.800862 | 1.180945e-48 | -8.615850e-47 |
| Msa0625720 | Msa1344130 | 0.813967 | 1.957999e-51 | -8.615850e-47 |
| Msa0638070 | Msa1344130 | 0.804030 | 2.626712e-49 | -8.615850e-47 |
| Msa0657610 | Msa1344130 | 0.837365 | 5.426258e-57 | -8.615850e-47 |
| Msa0657970 | Msa1344130 | 0.813428 | 2.572071e-51 | -8.615850e-47 |
| Msa0661650 | Msa1344130 | 0.808468 | 3.051062e-50 | -8.615850e-47 |
| Msa0662570 | Msa1344130 | 0.812231 | 4.704199e-51 | -8.615850e-47 |
| Msa0663240 | Msa1344130 | 0.808884 | 2.486705e-50 | -8.615850e-47 |
| Msa0663390 | Msa1344130 | 0.811225 | 7.787296e-51 | -8.615850e-47 |
| Msa0669440 | Msa1344130 | 0.800134 | 1.661616e-48 | -8.615850e-47 |
| Msa0673460 | Msa1344130 | 0.810311 | 1.227942e-50 | -8.615850e-47 |
| Msa0688070 | Msa1344130 | 0.820293 | 7.405829e-53 | -8.615850e-47 |
| Msa0688480 | Msa1344130 | 0.805360 | 1.385971e-49 | -8.615850e-47 |
| Msa0693380 | Msa1344130 | 0.802527 | 5.376865e-49 | -8.615850e-47 |
| Msa0697040 | Msa1344130 | 0.804810 | 1.806258e-49 | -8.615850e-47 |
| Msa0715470 | Msa1344130 | 0.823033 | 1.722067e-53 | -8.615850e-47 |
| Msa0715700 | Msa1344130 | 0.807806 | 4.222140e-50 | -8.615850e-47 |
| Msa0715720 | Msa1344130 | 0.803966 | 2.708140e-49 | -8.615850e-47 |
| Msa0724210 | Msa1344130 | 0.822629 | 2.138769e-53 | -8.615850e-47 |
| Msa0727710 | Msa1344130 | 0.801301 | 9.606944e-49 | -8.615850e-47 |
| Msa0731940 | Msa1344130 | 0.803705 | 3.068226e-49 | -8.615850e-47 |
| Msa0732840 | Msa1344130 | 0.813828 | 2.100385e-51 | -8.615850e-47 |
| Msa0735400 | Msa1344130 | 0.815610 | 8.466493e-52 | -8.615850e-47 |
| Msa0740510 | Msa1344130 | 0.815857 | 7.458392e-52 | -8.615850e-47 |
| Msa0743720 | Msa1344130 | 0.812166 | 4.859663e-51 | -8.615850e-47 |
| Msa0744170 | Msa1344130 | -0.804966 | 1.675775e-49 | -8.615850e-47 |
| Msa0745790 | Msa1344130 | 0.805835 | 1.101736e-49 | -8.615850e-47 |
| Msa0760130 | Msa1344130 | 0.804272 | 2.339601e-49 | -8.615850e-47 |
| Msa0762970 | Msa1344130 | 0.803081 | 4.133271e-49 | -8.615850e-47 |
| Msa0766630 | Msa1344130 | 0.812006 | 5.267666e-51 | -8.615850e-47 |
| Msa0769920 | Msa1344130 | 0.801859 | 7.378876e-49 | -8.615850e-47 |
| Msa0799370 | Msa1344130 | 0.812256 | 4.646344e-51 | -8.615850e-47 |
| Msa0806090 | Msa1344130 | 0.811811 | 5.807480e-51 | -8.615850e-47 |
| Msa0810220 | Msa1344130 | 0.805597 | 1.236054e-49 | -8.615850e-47 |
| Msa0813200 | Msa1344130 | 0.802161 | 6.398097e-49 | -8.615850e-47 |
| Msa0820770 | Msa1344130 | 0.821736 | 3.445087e-53 | -8.615850e-47 |
| Msa0820850 | Msa1344130 | 0.833534 | 5.045691e-56 | -8.615850e-47 |
| Msa0127650 | Msa1344130 | 0.800023 | 1.750620e-48 | -8.615850e-47 |
| Msa0133130 | Msa1344130 | 0.825724 | 4.009982e-54 | -8.615850e-47 |
| Msa0135820 | Msa1344130 | 0.809482 | 1.851572e-50 | -8.615850e-47 |
| Msa0140780 | Msa1344130 | 0.809973 | 1.451924e-50 | -8.615850e-47 |
| Msa0142660 | Msa1344130 | 0.806030 | 1.002471e-49 | -8.615850e-47 |
| Msa0145260 | Msa1344130 | 0.801761 | 7.729744e-49 | -8.615850e-47 |
| Msa0145310 | Msa1344130 | 0.812771 | 3.585711e-51 | -8.615850e-47 |
| Msa0151180 | Msa1344130 | 0.825029 | 5.857461e-54 | -8.615850e-47 |
| Msa0157290 | Msa1344130 | 0.830411 | 2.981683e-55 | -8.615850e-47 |
| Msa0165510 | Msa1344130 | 0.810800 | 9.628480e-51 | -8.615850e-47 |
| Msa0165520 | Msa1344130 | 0.804733 | 1.874538e-49 | -8.615850e-47 |
| Msa0169860 | Msa1344130 | 0.805617 | 1.224327e-49 | -8.615850e-47 |
| Msa0173990 | Msa1344130 | 0.818508 | 1.890166e-52 | -8.615850e-47 |
| Msa0180500 | Msa1344130 | 0.801917 | 7.179140e-49 | -8.615850e-47 |
| Msa0188460 | Msa1344130 | 0.807405 | 5.136725e-50 | -8.615850e-47 |
| Msa0188830 | Msa1344130 | 0.807043 | 6.130020e-50 | -8.615850e-47 |
| Msa0197660 | Msa1344130 | 0.813015 | 3.169166e-51 | -8.615850e-47 |
| Msa0208090 | Msa1344130 | 0.801149 | 1.031589e-48 | -8.615850e-47 |
| Msa0210450 | Msa1344130 | 0.807651 | 4.555910e-50 | -8.615850e-47 |
| Msa0217680 | Msa1344130 | 0.800965 | 1.125360e-48 | -8.615850e-47 |
| Msa0220580 | Msa1344130 | 0.816824 | 4.531171e-52 | -8.615850e-47 |
| Msa0220740 | Msa1344130 | 0.819591 | 1.071544e-52 | -8.615850e-47 |
| Msa0222890 | Msa1344130 | 0.805748 | 1.148975e-49 | -8.615850e-47 |
| Msa0223010 | Msa1344130 | 0.807844 | 4.144781e-50 | -8.615850e-47 |
| Msa0223410 | Msa1344130 | -0.818149 | 2.278954e-52 | -8.615850e-47 |
| Msa0237260 | Msa1344130 | 0.818118 | 2.315983e-52 | -8.615850e-47 |
| Msa1233500 | Msa1344130 | 0.802730 | 4.882860e-49 | -8.615850e-47 |
| Msa1233890 | Msa1344130 | 0.812694 | 3.726247e-51 | -8.615850e-47 |
| Msa1244250 | Msa1344130 | 0.817161 | 3.805909e-52 | -8.615850e-47 |
| Msa1249490 | Msa1344130 | 0.838984 | 2.077379e-57 | -8.615850e-47 |
| Msa1250890 | Msa1344130 | 0.820888 | 5.406146e-53 | -8.615850e-47 |
| Msa1259590 | Msa1344130 | -0.814000 | 1.924749e-51 | -8.615850e-47 |
| Msa1276440 | Msa1344130 | 0.823774 | 1.155908e-53 | -8.615850e-47 |
| Msa1282580 | Msa1344130 | -0.817961 | 2.512648e-52 | -8.615850e-47 |
| Msa1284680 | Msa1344130 | 0.825229 | 5.252912e-54 | -8.615850e-47 |
| Msa1298260 | Msa1344130 | 0.806788 | 6.937676e-50 | -8.615850e-47 |
| Msa1305190 | Msa1344130 | 0.828274 | 9.849104e-55 | -8.615850e-47 |
| Msa1305340 | Msa1344130 | 0.838547 | 2.694971e-57 | -8.615850e-47 |
| Msa1314340 | Msa1344130 | 0.800452 | 1.432061e-48 | -8.615850e-47 |
| Msa1318990 | Msa1344130 | 0.801271 | 9.742278e-49 | -8.615850e-47 |
| Msa1320620 | Msa1344130 | 0.804220 | 2.398115e-49 | -8.615850e-47 |
| Msa1324500 | Msa1344130 | 0.805745 | 1.150615e-49 | -8.615850e-47 |
| Msa1325860 | Msa1344130 | -0.827585 | 1.442426e-54 | -8.615850e-47 |
| Msa1327680 | Msa1344130 | 0.806366 | 8.517102e-50 | -8.615850e-47 |
| Msa1331000 | Msa1344130 | 0.813806 | 2.124214e-51 | -8.615850e-47 |
| Msa1343760 | Msa1344130 | 0.802561 | 5.290705e-49 | -8.615850e-47 |
| Msa1344110 | Msa1344130 | 0.854412 | 1.252145e-61 | -8.615850e-47 |
| Msa1344130 | Msa1359040 | 0.813644 | 2.305669e-51 | -8.615850e-47 |
| Msa1344130 | Msa1372760 | 0.815034 | 1.136911e-51 | -8.615850e-47 |
| Msa1344130 | Msa1373030 | 0.806219 | 9.147054e-50 | -8.615850e-47 |
| Msa1344130 | Msa1374470 | 0.826083 | 3.294753e-54 | -8.615850e-47 |
| Msa1344130 | Msa1381530 | 0.828624 | 8.107944e-55 | -8.615850e-47 |
| Msa1344130 | Msa1390050 | 0.800286 | 1.547675e-48 | -8.615850e-47 |
| Msa1344130 | Msa1392260 | 0.812655 | 3.800554e-51 | -8.615850e-47 |
| Msa1344130 | Msa1397120 | 0.805872 | 1.082095e-49 | -8.615850e-47 |
| Msa1344130 | Msa1398890 | 0.814690 | 1.354847e-51 | -8.615850e-47 |
| Msa1344130 | Msa1403340 | 0.812755 | 3.614083e-51 | -8.615850e-47 |
| Msa1344130 | Msa1403890 | 0.805089 | 1.579722e-49 | -8.615850e-47 |
| Msa1344130 | Msa1407600 | 0.827867 | 1.234301e-54 | -8.615850e-47 |
| Msa1344130 | Msa1410680 | 0.816802 | 4.584124e-52 | -8.615850e-47 |
| Msa1344130 | Msa1411020 | 0.804842 | 1.778926e-49 | -8.615850e-47 |
| Msa1344130 | Msa1420140 | 0.811092 | 8.322519e-51 | -8.615850e-47 |
| Msa1344130 | Msa1420490 | 0.802508 | 5.426688e-49 | -8.615850e-47 |
| Msa1344130 | Msa1423390 | 0.804081 | 2.563229e-49 | -8.615850e-47 |
| Msa1344130 | Msa1424290 | 0.800073 | 1.710194e-48 | -8.615850e-47 |
| Msa1344130 | Msa1424750 | 0.810210 | 1.290713e-50 | -8.615850e-47 |
| Msa1344130 | Msa1425100 | 0.804408 | 2.190979e-49 | -8.615850e-47 |
| Msa1344130 | Msa1427230 | 0.817545 | 3.119366e-52 | -8.615850e-47 |
| Msa1344130 | Msa1430680 | 0.800961 | 1.127155e-48 | -8.615850e-47 |
| Msa1344130 | Msa1434350 | 0.801975 | 6.985874e-49 | -8.615850e-47 |
| Msa1344130 | Msa1439320 | 0.804454 | 2.144112e-49 | -8.615850e-47 |
| Msa1344130 | Msa1440370 | 0.803369 | 3.602975e-49 | -8.615850e-47 |
| Msa1344130 | Msa1451620 | -0.818506 | 1.891353e-52 | -8.615850e-47 |
| Msa1344130 | Msa1452240 | 0.815626 | 8.394259e-52 | -8.615850e-47 |
| Msa1344130 | Msa1453250 | 0.805907 | 1.064252e-49 | -8.615850e-47 |
| Msa1344130 | Msa1455490 | 0.801229 | 9.934953e-49 | -8.615850e-47 |
| Msa1344130 | Msa1460830 | 0.813306 | 2.736557e-51 | -8.615850e-47 |
| Msa1344130 | Msa1463670 | 0.808868 | 2.506166e-50 | -8.615850e-47 |
| Msa1344130 | Msa1464940 | 0.820225 | 7.675576e-53 | -8.615850e-47 |
| Msa1344130 | Msa1466540 | 0.835721 | 1.423269e-56 | -8.615850e-47 |
| Msa0365490 | Msa1344130 | 0.804914 | 1.718550e-49 | -8.615850e-47 |
| Msa0367870 | Msa1344130 | 0.802397 | 5.720160e-49 | -8.615850e-47 |
| Msa0373930 | Msa1344130 | 0.801584 | 8.404983e-49 | -8.615850e-47 |
| Msa0379640 | Msa1344130 | 0.839085 | 1.956162e-57 | -8.615850e-47 |
| Msa0392040 | Msa1344130 | -0.805892 | 1.071982e-49 | -8.615850e-47 |
| Msa0402290 | Msa1344130 | 0.810336 | 1.212425e-50 | -8.615850e-47 |
| Msa0411390 | Msa1344130 | 0.807286 | 5.444765e-50 | -8.615850e-47 |
| Msa0412840 | Msa1344130 | 0.805750 | 1.148030e-49 | -8.615850e-47 |
| Msa0419980 | Msa1344130 | 0.815949 | 7.112031e-52 | -8.615850e-47 |
| Msa0426900 | Msa1344130 | 0.805306 | 1.422753e-49 | -8.615850e-47 |
| Msa0428080 | Msa1344130 | 0.804677 | 1.925443e-49 | -8.615850e-47 |
| Msa0428930 | Msa1344130 | 0.805931 | 1.051612e-49 | -8.615850e-47 |
| Msa0431690 | Msa1344130 | 0.811259 | 7.656170e-51 | -8.615850e-47 |
| Msa0433410 | Msa1344130 | -0.805274 | 1.444920e-49 | -8.615850e-47 |
| Msa0436760 | Msa1344130 | 0.825731 | 3.994358e-54 | -8.615850e-47 |
| Msa0437560 | Msa1344130 | 0.804843 | 1.778579e-49 | -8.615850e-47 |
| Msa0440750 | Msa1344130 | 0.811907 | 5.534325e-51 | -8.615850e-47 |
| Msa0455760 | Msa1344130 | 0.823086 | 1.674147e-53 | -8.615850e-47 |
| Msa0465940 | Msa1344130 | 0.804237 | 2.379031e-49 | -8.615850e-47 |
| Msa0466120 | Msa1344130 | 0.809602 | 1.745214e-50 | -8.615850e-47 |
| Msa0466390 | Msa1344130 | 0.808131 | 3.600116e-50 | -8.615850e-47 |
| Msa0475490 | Msa1344130 | 0.821263 | 4.431432e-53 | -8.615850e-47 |
| Msa0477130 | Msa1344130 | -0.825492 | 4.550411e-54 | -8.615850e-47 |
| Msa0479660 | Msa1344130 | 0.808161 | 3.548457e-50 | -8.615850e-47 |
| Msa0481530 | Msa1344130 | 0.810169 | 1.317693e-50 | -8.615850e-47 |
| Msa0993290 | Msa1344130 | 0.810180 | 1.310479e-50 | -8.615850e-47 |
| Msa0993600 | Msa1344130 | 0.807949 | 3.935995e-50 | -8.615850e-47 |
| Msa0998690 | Msa1344130 | 0.814303 | 1.649878e-51 | -8.615850e-47 |
| Msa1006660 | Msa1344130 | 0.802516 | 5.407236e-49 | -8.615850e-47 |
| Msa1007030 | Msa1344130 | 0.803213 | 3.880117e-49 | -8.615850e-47 |
| Msa1014540 | Msa1344130 | 0.809487 | 1.847232e-50 | -8.615850e-47 |
| Msa1023920 | Msa1344130 | 0.801004 | 1.104832e-48 | -8.615850e-47 |
| Msa1028970 | Msa1344130 | 0.826866 | 2.144448e-54 | -8.615850e-47 |
| Msa1030970 | Msa1344130 | 0.801032 | 1.090109e-48 | -8.615850e-47 |
| Msa1033410 | Msa1344130 | -0.832373 | 9.808983e-56 | -8.615850e-47 |
| Msa1044420 | Msa1344130 | 0.802610 | 5.171084e-49 | -8.615850e-47 |
| Msa1058640 | Msa1344130 | 0.801814 | 7.540120e-49 | -8.615850e-47 |
| Msa1061680 | Msa1344130 | 0.805918 | 1.058343e-49 | -8.615850e-47 |
| Msa1073070 | Msa1344130 | -0.830304 | 3.167561e-55 | -8.615850e-47 |
| Msa1074530 | Msa1344130 | 0.812638 | 3.834280e-51 | -8.615850e-47 |
| Msa1075220 | Msa1344130 | -0.816740 | 4.731228e-52 | -8.615850e-47 |
| Msa1075650 | Msa1344130 | 0.813330 | 2.703740e-51 | -8.615850e-47 |
| Msa1082500 | Msa1344130 | 0.836669 | 8.172869e-57 | -8.615850e-47 |
| Msa1085390 | Msa1344130 | 0.813512 | 2.465735e-51 | -8.615850e-47 |
| Msa1090260 | Msa1344130 | 0.803204 | 3.896642e-49 | -8.615850e-47 |
| Msa0239800 | Msa1344130 | 0.803398 | 3.553603e-49 | -8.615850e-47 |
| Msa0243100 | Msa1344130 | 0.821273 | 4.408415e-53 | -8.615850e-47 |
| Msa0260680 | Msa1344130 | 0.809221 | 2.106019e-50 | -8.615850e-47 |
| Msa0280090 | Msa1344130 | 0.818563 | 1.836343e-52 | -8.615850e-47 |
| Msa0285450 | Msa1344130 | 0.827534 | 1.483879e-54 | -8.615850e-47 |
| Msa0287410 | Msa1344130 | 0.806138 | 9.516597e-50 | -8.615850e-47 |
| Msa0287650 | Msa1344130 | 0.809787 | 1.592516e-50 | -8.615850e-47 |
| Msa0295770 | Msa1344130 | 0.805290 | 1.433564e-49 | -8.615850e-47 |
| Msa0302580 | Msa1344130 | -0.808301 | 3.312023e-50 | -8.615850e-47 |
| Msa0305190 | Msa1344130 | 0.803133 | 4.032177e-49 | -8.615850e-47 |
| Msa0306210 | Msa1344130 | -0.824439 | 8.068349e-54 | -8.615850e-47 |
| Msa0317510 | Msa1344130 | 0.806459 | 8.142617e-50 | -8.615850e-47 |
| Msa0317720 | Msa1344130 | 0.808088 | 3.677526e-50 | -8.615850e-47 |
| Msa0317750 | Msa1344130 | 0.811943 | 5.436053e-51 | -8.615850e-47 |
| Msa0319170 | Msa1344130 | 0.843415 | 1.421095e-58 | -8.615850e-47 |
| Msa0326110 | Msa1344130 | 0.802273 | 6.065875e-49 | -8.615850e-47 |
| Msa0334360 | Msa1344130 | 0.801413 | 9.111969e-49 | -8.615850e-47 |
| Msa0340450 | Msa1344130 | 0.852763 | 3.728788e-61 | -8.615850e-47 |
| Msa0344980 | Msa1344130 | 0.815693 | 8.109955e-52 | -8.615850e-47 |
| Msa0355220 | Msa1344130 | 0.804230 | 2.387346e-49 | -8.615850e-47 |
| Msa0357340 | Msa1344130 | 0.800684 | 1.284302e-48 | -8.615850e-47 |
| Msa0359030 | Msa1344130 | 0.804824 | 1.794121e-49 | -8.615850e-47 |
| Msa0363790 | Msa1344130 | 0.824992 | 5.976063e-54 | -8.615850e-47 |
| Msa1107800 | Msa1344130 | 0.806357 | 8.555409e-50 | -8.615850e-47 |
| Msa1113170 | Msa1344130 | 0.801708 | 7.928059e-49 | -8.615850e-47 |
| Msa1114030 | Msa1344130 | 0.808408 | 3.143051e-50 | -8.615850e-47 |
| Msa1131220 | Msa1344130 | 0.820391 | 7.030430e-53 | -8.615850e-47 |
| Msa1154280 | Msa1344130 | 0.826990 | 2.002744e-54 | -8.615850e-47 |
| Msa1162550 | Msa1344130 | -0.817395 | 3.372397e-52 | -8.615850e-47 |
| Msa1173170 | Msa1344130 | 0.812742 | 3.637053e-51 | -8.615850e-47 |
| Msa1174040 | Msa1344130 | 0.804161 | 2.467323e-49 | -8.615850e-47 |
| Msa1174980 | Msa1344130 | 0.800804 | 1.213495e-48 | -8.615850e-47 |
| Msa1178110 | Msa1344130 | 0.802328 | 5.909375e-49 | -8.615850e-47 |
| Msa1186950 | Msa1344130 | -0.803210 | 3.887102e-49 | -8.615850e-47 |
| Msa1198770 | Msa1344130 | 0.818201 | 2.217728e-52 | -8.615850e-47 |
| Msa1211140 | Msa1344130 | -0.801332 | 9.467421e-49 | -8.615850e-47 |
| Msa1224480 | Msa1344130 | 0.819896 | 9.128169e-53 | -8.615850e-47 |
| Msa0483650 | Msa1344130 | 0.805040 | 1.617396e-49 | -8.615850e-47 |
| Msa0484720 | Msa1344130 | 0.801071 | 1.070304e-48 | -8.615850e-47 |
| Msa0484780 | Msa1344130 | 0.815602 | 8.500069e-52 | -8.615850e-47 |
| Msa0498650 | Msa1344130 | 0.803339 | 3.654475e-49 | -8.615850e-47 |
| Msa0512890 | Msa1344130 | 0.838459 | 2.839506e-57 | -8.615850e-47 |
| Msa0512900 | Msa1344130 | 0.848221 | 7.035159e-60 | -8.615850e-47 |
| Msa0515390 | Msa1344130 | 0.807289 | 5.436433e-50 | -8.615850e-47 |
| Msa0517110 | Msa1344130 | 0.814756 | 1.310348e-51 | -8.615850e-47 |
| Msa0529890 | Msa1344130 | 0.815459 | 9.147109e-52 | -8.615850e-47 |
| Msa0530650 | Msa1344130 | 0.803646 | 3.156975e-49 | -8.615850e-47 |
| Msa0532350 | Msa1344130 | 0.806737 | 7.114799e-50 | -8.615850e-47 |
| Msa0536220 | Msa1344130 | 0.814316 | 1.639587e-51 | -8.615850e-47 |
| Msa0553460 | Msa1344130 | 0.803970 | 2.703755e-49 | -8.615850e-47 |
| Msa0555020 | Msa1344130 | 0.833522 | 5.082990e-56 | -8.615850e-47 |
| Msa0575700 | Msa1344130 | 0.815533 | 8.803730e-52 | -8.615850e-47 |
| Msa0585560 | Msa1344130 | 0.811565 | 6.569973e-51 | -8.615850e-47 |
| Msa0599890 | Msa1344130 | 0.817500 | 3.193335e-52 | -8.615850e-47 |
| Msa0842650 | Msa1344130 | 0.828907 | 6.922840e-55 | -8.615850e-47 |
| Msa0861090 | Msa1344130 | 0.813196 | 2.892833e-51 | -8.615850e-47 |
| Msa0861130 | Msa1344130 | 0.831354 | 1.750430e-55 | -8.615850e-47 |
| Msa0862110 | Msa1344130 | 0.819977 | 8.747203e-53 | -8.615850e-47 |
| Msa0880140 | Msa1344130 | 0.828304 | 9.687229e-55 | -8.615850e-47 |
| Msa0898380 | Msa1344130 | 0.807144 | 5.833954e-50 | -8.615850e-47 |
| Msa0898750 | Msa1344130 | 0.809295 | 2.031090e-50 | -8.615850e-47 |
| Msa0907070 | Msa1344130 | 0.800797 | 1.217685e-48 | -8.615850e-47 |
| Msa0923010 | Msa1344130 | 0.806171 | 9.362087e-50 | -8.615850e-47 |
| Msa0924310 | Msa1344130 | 0.805398 | 1.360933e-49 | -8.615850e-47 |
| Msa0925290 | Msa1344130 | 0.802026 | 6.818412e-49 | -8.615850e-47 |
| Msa0926890 | Msa1344130 | 0.838091 | 3.532403e-57 | -8.615850e-47 |
| Msa0928130 | Msa1344130 | 0.813534 | 2.437945e-51 | -8.615850e-47 |
| Msa0933100 | Msa1344130 | 0.810717 | 1.003125e-50 | -8.615850e-47 |
| Msa0938220 | Msa1344130 | 0.802093 | 6.607463e-49 | -8.615850e-47 |
| Msa0947660 | Msa1344130 | 0.810788 | 9.683962e-51 | -8.615850e-47 |
| Msa0959360 | Msa1344130 | 0.807383 | 5.191585e-50 | -8.615850e-47 |
| Msa0964310 | Msa1344130 | 0.809923 | 1.488071e-50 | -8.615850e-47 |
| Msa0969520 | Msa1344130 | 0.837793 | 4.215164e-57 | -8.615850e-47 |
| Msa0973600 | Msa1344130 | 0.805510 | 1.289564e-49 | -8.615850e-47 |
| Msa0974070 | Msa1344130 | 0.806134 | 9.533482e-50 | -8.615850e-47 |
| Msa0976670 | Msa1344130 | 0.802910 | 4.482640e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344130 | MtrunA17_Chr1g0206761 | 49.057 | 106 | 17 | 3 | 1 | 72 | 1 | 103 | 7.79e-16 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTAATGGGTTCTGTTCA+AGG | 0.346498 | tig0006790:-41697 | None:intergenic |
| AGTTCTCAAGTGGAGGAAAA+AGG | 0.353703 | tig0006790:-41510 | Msa1344130:CDS |
| GGTAGTAAAGGGAGTGTTGC+TGG | 0.355967 | tig0006790:-41444 | Msa1344130:CDS |
| AAAACCATTCATCAGATAAC+TGG | 0.401419 | tig0006790:-41408 | Msa1344130:CDS |
| TTTGGAAGAAACGGCAGGTT+CGG | 0.430422 | tig0006790:-41665 | Msa1344130:intron |
| AGAGTCATGGTGGTGGTGGC+AGG | 0.445844 | tig0006790:-41551 | Msa1344130:CDS |
| TGTTCAAGGTGATCGAGCTT+TGG | 0.459674 | tig0006790:-41683 | Msa1344130:CDS |
| CTAACCAGTTATCTGATGAA+TGG | 0.462802 | tig0006790:+41404 | Msa1344130:intergenic |
| CCTGCAGGCACTGGTAGTAA+AGG | 0.468442 | tig0006790:-41456 | Msa1344130:CDS |
| CTGCAGGCACTGGTAGTAAA+GGG | 0.481427 | tig0006790:-41455 | Msa1344130:CDS |
| GACAATTTCTAGTTCTCAAG+TGG | 0.492881 | tig0006790:-41520 | Msa1344130:CDS |
| CCTTTACTACCAGTGCCTGC+AGG | 0.505585 | tig0006790:+41456 | Msa1344130:intergenic |
| AAGGAGAGTCATGGTGGTGG+TGG | 0.519066 | tig0006790:-41555 | Msa1344130:CDS |
| TGATCGAGCTTTGGAAGAAA+CGG | 0.531100 | tig0006790:-41674 | Msa1344130:CDS |
| CGAGCTTTGGAAGAAACGGC+AGG | 0.564383 | tig0006790:-41670 | Msa1344130:CDS |
| TGGAAGGAGAGTCATGGTGG+TGG | 0.582142 | tig0006790:-41558 | Msa1344130:intron |
| AATTTCTAGTTCTCAAGTGG+AGG | 0.602033 | tig0006790:-41517 | Msa1344130:CDS |
| CCGTGGAAGGAGAGTCATGG+TGG | 0.660355 | tig0006790:-41561 | Msa1344130:intron |
| TGGCCGTGGAAGGAGAGTCA+TGG | 0.660402 | tig0006790:-41564 | Msa1344130:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAATAACGAAAATTAAC+AGG | + | tig0006790:41488-41507 | Msa1344130:intergenic | 20.0% |
| AAAACCATTCATCAGATAAC+TGG | - | tig0006790:41687-41706 | Msa1344130:CDS | 30.0% | |
| !! | GACAATTTCTAGTTCTCAAG+TGG | - | tig0006790:41575-41594 | Msa1344130:intron | 35.0% |
| !! | AATTTCTAGTTCTCAAGTGG+AGG | - | tig0006790:41578-41597 | Msa1344130:intron | 35.0% |
| CTAACCAGTTATCTGATGAA+TGG | + | tig0006790:41694-41713 | Msa1344130:intergenic | 35.0% | |
| !! | TGATCGAGCTTTGGAAGAAA+CGG | - | tig0006790:41421-41440 | Msa1344130:CDS | 40.0% |
| AACGGTACTCTTTGTCATTC+TGG | + | tig0006790:41510-41529 | Msa1344130:intergenic | 40.0% | |
| !! | AATGACAAAGAGTACCGTTG+TGG | - | tig0006790:41511-41530 | Msa1344130:CDS | 40.0% |
| AGTTCTCAAGTGGAGGAAAA+AGG | - | tig0006790:41585-41604 | Msa1344130:intron | 40.0% | |
| GACAAGAAAAACAAACCTGC+AGG | - | tig0006790:41624-41643 | Msa1344130:intron | 40.0% | |
| TGTTCAAGGTGATCGAGCTT+TGG | - | tig0006790:41412-41431 | Msa1344130:CDS | 45.0% | |
| TTTGGAAGAAACGGCAGGTT+CGG | - | tig0006790:41430-41449 | Msa1344130:CDS | 45.0% | |
| AAAAACAAACCTGCAGGCAC+TGG | - | tig0006790:41630-41649 | Msa1344130:intron | 45.0% | |
| !! | CTGCAGGCACTGGTAGTAAA+GGG | - | tig0006790:41640-41659 | Msa1344130:intron | 50.0% |
| !! | GGTAGTAAAGGGAGTGTTGC+TGG | - | tig0006790:41651-41670 | Msa1344130:intron | 50.0% |
| !! | CGAGCTTTGGAAGAAACGGC+AGG | - | tig0006790:41425-41444 | Msa1344130:CDS | 55.0% |
| !! | AAAGAGTACCGTTGTGGCCG+TGG | - | tig0006790:41517-41536 | Msa1344130:CDS | 55.0% |
| CCACCATGACTCTCCTTCCA+CGG | + | tig0006790:41537-41556 | Msa1344130:intergenic | 55.0% | |
| TGGAAGGAGAGTCATGGTGG+TGG | - | tig0006790:41537-41556 | Msa1344130:CDS | 55.0% | |
| !! | AAGGAGAGTCATGGTGGTGG+TGG | - | tig0006790:41540-41559 | Msa1344130:CDS | 55.0% |
| CCTTTACTACCAGTGCCTGC+AGG | + | tig0006790:41642-41661 | Msa1344130:intergenic | 55.0% | |
| !! | CCTGCAGGCACTGGTAGTAA+AGG | - | tig0006790:41639-41658 | Msa1344130:intron | 55.0% |
| AGTACCGTTGTGGCCGTGGA+AGG | - | tig0006790:41521-41540 | Msa1344130:CDS | 60.0% | |
| CTCTCCTTCCACGGCCACAA+CGG | + | tig0006790:41528-41547 | Msa1344130:intergenic | 60.0% | |
| TGGCCGTGGAAGGAGAGTCA+TGG | - | tig0006790:41531-41550 | Msa1344130:CDS | 60.0% | |
| CCGTGGAAGGAGAGTCATGG+TGG | - | tig0006790:41534-41553 | Msa1344130:CDS | 60.0% | |
| !! | AGAGTCATGGTGGTGGTGGC+AGG | - | tig0006790:41544-41563 | Msa1344130:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006790 | gene | 41404 | 41713 | 41404 | ID=Msa1344130;Name=Msa1344130 |
| tig0006790 | mRNA | 41404 | 41713 | 41404 | ID=Msa1344130-mRNA-1;Parent=Msa1344130;Name=Msa1344130-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|72 |
| tig0006790 | exon | 41666 | 41713 | 41666 | ID=Msa1344130-mRNA-1:exon:4379;Parent=Msa1344130-mRNA-1 |
| tig0006790 | exon | 41404 | 41574 | 41404 | ID=Msa1344130-mRNA-1:exon:4378;Parent=Msa1344130-mRNA-1 |
| tig0006790 | CDS | 41666 | 41713 | 41666 | ID=Msa1344130-mRNA-1:cds;Parent=Msa1344130-mRNA-1 |
| tig0006790 | CDS | 41404 | 41574 | 41404 | ID=Msa1344130-mRNA-1:cds;Parent=Msa1344130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
