AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0452620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452620 MtrunA17_Chr3g0133481 92.839 391 22 1 35 419 1 391 0.0 732
Msa0452620 MtrunA17_Chr3g0133511 63.910 399 127 5 35 416 1 399 9.59e-170 481
Msa0452620 MtrunA17_Chr3g0133391 62.725 389 132 4 39 417 4 389 9.82e-161 457
Msa0452620 MtrunA17_Chr3g0083861 59.420 414 149 6 14 415 33 439 8.31e-159 455
Msa0452620 MtrunA17_Chr7g0233731 60.354 396 141 5 33 413 6 400 1.98e-155 447
Msa0452620 MtrunA17_Chr7g0233731 66.129 62 20 1 357 417 399 460 5.05e-16 79.7
Msa0452620 MtrunA17_Chr7g0233701 61.026 390 141 3 39 417 7 396 3.32e-153 439
Msa0452620 MtrunA17_Chr4g0023671 59.137 394 144 5 35 417 1 388 7.75e-153 437
Msa0452620 MtrunA17_Chr3g0133531 71.572 299 84 1 119 416 7 305 1.54e-152 434
Msa0452620 MtrunA17_Chr8g0346621 58.734 395 146 4 33 417 10 397 1.69e-151 434
Msa0452620 MtrunA17_Chr3g0133411 57.071 396 142 5 49 417 44 438 8.47e-146 422
Msa0452620 MtrunA17_Chr2g0302611 56.122 392 148 8 39 415 4 386 3.38e-139 403
Msa0452620 MtrunA17_Chr2g0302581 55.357 392 151 7 39 415 4 386 2.77e-138 400
Msa0452620 MtrunA17_Chr3g0096411 55.527 389 135 7 41 416 28 391 4.37e-136 395
Msa0452620 MtrunA17_Chr3g0133431 55.155 388 150 8 41 415 29 405 1.09e-129 379
Msa0452620 MtrunA17_Chr3g0134681 54.430 395 137 6 35 416 53 417 3.08e-129 379
Msa0452620 MtrunA17_Chr3g0083001 53.213 389 136 7 40 415 16 371 1.69e-119 352
Msa0452620 MtrunA17_Chr8g0358841 64.286 266 90 2 155 415 2 267 3.65e-116 340
Msa0452620 MtrunA17_Chr3g0133371 64.567 254 84 3 167 417 38 288 8.87e-113 332
Msa0452620 MtrunA17_Chr7g0233721 64.639 263 88 2 160 417 16 278 3.76e-112 330
Msa0452620 MtrunA17_Chr4g0046911 64.231 260 84 3 160 415 4 258 2.29e-109 322
Msa0452620 MtrunA17_Chr7g0233691 60.967 269 100 2 154 417 10 278 6.62e-106 314
Msa0452620 MtrunA17_Chr3g0083041 62.257 257 90 4 163 415 44 297 6.88e-97 292
Msa0452620 MtrunA17_Chr3g0083871 55.939 261 90 3 160 415 9 249 6.51e-92 277
Msa0452620 MtrunA17_Chr7g0233751 50.993 302 116 4 40 328 16 298 9.61e-89 271
Msa0452620 MtrunA17_Chr8g0346661 59.031 227 85 2 35 255 1 225 2.44e-82 252
Msa0452620 MtrunA17_Chr3g0141031 61.860 215 74 2 208 417 9 220 1.21e-81 250
Msa0452620 MtrunA17_Chr3g0143151 41.207 381 193 11 62 417 36 410 2.70e-75 240
Msa0452620 MtrunA17_Chr2g0302701 60.000 205 69 4 220 415 12 212 1.01e-74 232
Msa0452620 MtrunA17_Chr3g0133091 59.195 174 65 2 201 368 1 174 1.82e-65 207
Msa0452620 MtrunA17_Chr3g0132731 63.830 141 51 0 165 305 18 158 9.65e-62 196
Msa0452620 MtrunA17_Chr3g0133501 63.750 160 47 3 266 416 1 158 1.34e-59 191
Msa0452620 MtrunA17_Chr3g0133401 56.522 184 44 2 234 417 1 148 2.49e-59 190
Msa0452620 MtrunA17_Chr8g0346651 61.538 156 51 2 266 417 1 151 3.01e-57 185
Msa0452620 MtrunA17_Chr3g0133471 59.639 166 58 3 234 391 1 165 1.29e-56 184
Msa0452620 MtrunA17_Chr3g0134651 55.556 171 66 3 223 383 1 171 4.06e-51 170
Msa0452620 MtrunA17_Chr4g0046951 63.964 111 40 0 160 270 4 114 4.00e-45 152
Msa0452620 MtrunA17_Chr7g0233711 58.140 129 48 1 39 161 7 135 8.96e-41 142
Msa0452620 MtrunA17_Chr7g0233681 52.174 138 57 2 33 161 4 141 3.64e-39 137
Msa0452620 MtrunA17_Chr3g0133351 58.140 129 46 2 38 160 3 129 7.49e-39 137
Msa0452620 MtrunA17_Chr8g0358851 56.818 132 51 1 35 160 1 132 2.03e-37 132
Msa0452620 MtrunA17_Chr4g0046961 57.937 126 44 2 295 416 2 122 3.39e-37 132
Msa0452620 MtrunA17_Chr3g0133521 61.458 96 37 0 161 256 2 97 8.41e-36 127
Msa0452620 MtrunA17_Chr3g0134661 61.386 101 33 1 50 144 1 101 3.29e-34 123
Msa0452620 MtrunA17_Chr4g0046941 54.135 133 52 3 35 160 1 131 1.31e-33 122
Msa0452620 MtrunA17_Chr3g0141021 57.746 71 30 0 144 214 1 71 7.23e-24 94.7
Msa0452620 MtrunA17_Chr3g0132691 68.852 61 19 0 234 294 1 61 3.86e-23 92.0
Msa0452620 MtrunA17_Chr3g0133491 73.913 46 12 0 372 417 1 46 2.11e-17 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452620 AT1G47710.1 49.100 389 184 5 39 415 4 390 1.29e-124 366
Msa0452620 AT1G47710.2 49.100 389 184 5 39 415 31 417 8.62e-124 365
Msa0452620 AT3G45220.1 42.640 394 199 6 40 414 5 390 2.80e-102 309
Msa0452620 AT2G25240.1 43.702 389 194 9 40 414 5 382 3.59e-101 306
Msa0452620 AT2G26390.1 41.327 392 203 8 40 414 5 386 1.25e-93 287
Msa0452620 AT1G64030.1 42.487 386 194 7 39 414 4 371 1.09e-92 285
Msa0452620 AT1G62170.1 42.896 366 173 7 63 414 88 431 3.59e-91 282
Msa0452620 AT2G14540.1 43.490 361 177 4 63 414 55 397 1.06e-87 272
Msa0452620 AT1G62170.2 39.348 399 173 8 63 414 88 464 3.08e-84 265
Msa0452620 AT2G35580.1 38.845 381 201 8 39 414 18 371 8.23e-82 256
Msa0452620 AT1G64010.2 47.222 216 91 5 201 414 1 195 4.78e-61 197
Msa0452620 AT1G64010.1 46.766 201 84 5 216 414 2 181 4.86e-54 178
Msa0452620 AT1G62160.1 40.704 199 89 5 223 414 42 218 6.22e-33 124
Msa0452620 AT1G63280.1 50.847 118 54 2 157 272 5 120 1.20e-32 120
Msa0452620 AT1G51330.1 44.643 112 59 2 158 266 29 140 3.50e-25 102

Find 121 sgRNAs with CRISPR-Local

Find 858 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAATGCACTATACTTTAA+AGG 0.155210 3_3:+41620438 Msa0452620:CDS
CTAACCAAACAGGGAATTTA+TGG 0.195276 3_3:+41613538 Msa0452620:five_prime_UTR
TATGAGGAAGCTTGTCTTCT+AGG 0.205127 3_3:-41613917 None:intergenic
CCACATTTCAAAATTTATTC+TGG 0.250142 3_3:+41620768 Msa0452620:CDS
ATATCGTTGCCTTTCTTATA+AGG 0.269460 3_3:-41620606 None:intergenic
TTCATTGAAGTAAATGAAAA+AGG 0.281273 3_3:+41620906 Msa0452620:CDS
CCTCTTCATGCTAGTCATAA+AGG 0.293948 3_3:-41613742 None:intergenic
AAATGGCGAACTCTCCGATT+TGG 0.294557 3_3:+41620859 Msa0452620:CDS
AATACTTTAGAAACACTAAT+TGG 0.320577 3_3:-41614074 None:intergenic
GGAAAAGAGGTGAGAGGATA+AGG 0.329026 3_3:-41620061 None:intergenic
GATGCAAAAGATGGGTTGTT+AGG 0.331478 3_3:+41613861 Msa0452620:five_prime_UTR
GGTCAGCTACAAAGTCTATT+GGG 0.353199 3_3:-41620995 None:intergenic
TCTTGATGAGAAGAATTATC+TGG 0.354936 3_3:+41614231 Msa0452620:five_prime_UTR
AAGTGATAGTGGGTGACTTC+AGG 0.357075 3_3:+41620742 Msa0452620:CDS
AATGGCGAACTCTCCGATTT+GGG 0.362900 3_3:+41620860 Msa0452620:CDS
TCATCTTCACCTTGCTTGTA+AGG 0.365945 3_3:-41613807 None:intergenic
CAGCCCATAAATTCCCTGTT+TGG 0.370665 3_3:-41613542 None:intergenic
TCTGATGTGTTGAAGGAGTT+AGG 0.381460 3_3:+41614002 Msa0452620:five_prime_UTR
AGTATCAACAATTTCTTTGA+AGG 0.389170 3_3:-41620175 None:intergenic
CGTCAGCTTCTCTCCTTCCT+TGG 0.391854 3_3:+41620012 Msa0452620:CDS
CAAGTGCACAATCCTCTTGC+TGG 0.393151 3_3:+41614273 Msa0452620:five_prime_UTR
TCTGGTACAATACTCTTTGT+TGG 0.397620 3_3:+41614249 Msa0452620:five_prime_UTR
ATTAGTGATGTTCTTTCACC+TGG 0.400115 3_3:+41620384 Msa0452620:CDS
TGGTCAGCTACAAAGTCTAT+TGG 0.402096 3_3:-41620996 None:intergenic
CTACTATGCTGAGCACAGTT+TGG 0.403622 3_3:-41619963 None:intergenic
TTCTAATGTGTCAAAGGAGT+TGG 0.404381 3_3:+41620800 Msa0452620:CDS
GGAGCAATCGTTTGATGCTT+CGG 0.404813 3_3:+41613668 Msa0452620:five_prime_UTR
CTGGTACAATACTCTTTGTT+GGG 0.404814 3_3:+41614250 Msa0452620:five_prime_UTR
GCTAATGAAGCTAACCAAAC+AGG 0.404894 3_3:+41613528 Msa0452620:five_prime_UTR
TCTGGTACAATACTCTTTGT+TGG 0.408824 3_3:+41621050 Msa0452620:CDS
TATAGATCATATATAATTGA+TGG 0.417396 3_3:-41614338 None:intergenic
GAAACACAAACTTCCATGTA+AGG 0.418420 3_3:+41620719 Msa0452620:CDS
TGAAATTTCTGATGTGTTGA+AGG 0.418942 3_3:+41613995 Msa0452620:five_prime_UTR
CCCACTATCACTTCCTTACA+TGG 0.419405 3_3:-41620732 None:intergenic
CTTCGTCTTCCTTATAAGAA+AGG 0.420477 3_3:+41620597 Msa0452620:CDS
TATATTTCATATTGTTGTAA+AGG 0.424404 3_3:+41613506 Msa0452620:five_prime_UTR
GTTAGCTTTGATTGAGAAAG+TGG 0.425057 3_3:+41620677 Msa0452620:CDS
TTTCTTCCAGATGCAAAAGA+TGG 0.428739 3_3:+41613852 Msa0452620:five_prime_UTR
CTCTTCATGCTAGTCATAAA+GGG 0.432869 3_3:-41613741 None:intergenic
AGGGAATTTATGGGCTGAAA+AGG 0.437448 3_3:+41613548 Msa0452620:five_prime_UTR
TCCATGTAAGGAAGTGATAG+TGG 0.440746 3_3:+41620731 Msa0452620:CDS
CAACAAGAGGATTGAGCACT+TGG 0.450565 3_3:-41621073 None:intergenic
AGTTTGTGTTTCAAAATCTC+AGG 0.451018 3_3:-41620708 None:intergenic
CAAGTGCTCAATCCTCTTGT+TGG 0.453144 3_3:+41621074 Msa0452620:CDS
GTCAAACCTCCGTCAGAGAA+AGG 0.455408 3_3:-41620834 None:intergenic
TAACCAAACAGGGAATTTAT+GGG 0.469366 3_3:+41613539 Msa0452620:five_prime_UTR
TTGATAAGAGACGATTTGTC+TGG 0.469705 3_3:+41621032 Msa0452620:CDS
TCAAAAGAAATATTGAATCT+TGG 0.470594 3_3:-41613969 None:intergenic
CAACAATTTCTTTGAAGGAA+GGG 0.472215 3_3:-41620170 None:intergenic
GTCACTAGAACCGGACTATC+GGG 0.472492 3_3:+41620945 Msa0452620:CDS
TTAAATTAGCGATTGATTCG+CGG 0.473914 3_3:-41619855 None:intergenic
AACAATCCATCTCTTGCATC+GGG 0.475826 3_3:-41620657 None:intergenic
GTCAAACCTCCAATAGAGAA+AGG 0.475976 3_3:-41614035 None:intergenic
GTGTTTCAAAATCTCAGGTT+TGG 0.477894 3_3:-41620703 None:intergenic
TCAACAATTTCTTTGAAGGA+AGG 0.480156 3_3:-41620171 None:intergenic
TCTAATGTGTCAAAGGAGTT+GGG 0.480326 3_3:+41620801 Msa0452620:CDS
CTTCTCATCAAGAACAAGAA+AGG 0.486079 3_3:-41614221 None:intergenic
GCTGCTGTAGTCACTAGAAC+CGG 0.487974 3_3:+41620936 Msa0452620:CDS
TCTCGGTGGCAGCTCAATCA+AGG 0.492253 3_3:+41620515 Msa0452620:CDS
TGAAGGAAGGGTAAACAGAA+AGG 0.497719 3_3:-41620158 None:intergenic
GAAGGAAGGGTAAACAGAAA+GGG 0.500206 3_3:-41620157 None:intergenic
GAGAGGATAAGGAGTTGAGA+TGG 0.502008 3_3:-41620050 None:intergenic
AGACAACTGTGGACCACCAT+AGG 0.503886 3_3:-41620106 None:intergenic
TAAGGAGTTGAGATGGTCAA+TGG 0.510048 3_3:-41620043 None:intergenic
TGAACTTTCTAATGTGTCAA+AGG 0.513651 3_3:+41620794 Msa0452620:CDS
ACAAATGCATTATACTTCAA+AGG 0.517977 3_3:+41613639 Msa0452620:five_prime_UTR
TTCTTCCAGATGCAAAAGAT+GGG 0.522138 3_3:+41613853 Msa0452620:five_prime_UTR
CCTCATACAAAAGTGGTAGT+AGG 0.523628 3_3:+41613933 Msa0452620:five_prime_UTR
TGGGCTGAAAAGGAAACAAA+AGG 0.525295 3_3:+41613558 Msa0452620:five_prime_UTR
ACGAGCACATCCCGATAGTC+CGG 0.528493 3_3:-41620955 None:intergenic
TAACAATCCATCTCTTGCAT+CGG 0.531098 3_3:-41620658 None:intergenic
TTCTCAACACACTTCAACTC+CGG 0.533411 3_3:+41614172 Msa0452620:five_prime_UTR
TTTCTTCCCGATGCAAGAGA+TGG 0.534096 3_3:+41620651 Msa0452620:CDS
AGTCACTAGAACCGGACTAT+CGG 0.534523 3_3:+41620944 Msa0452620:CDS
ATGATTGAAGTAAATGAAGA+AGG 0.537937 3_3:+41614107 Msa0452620:five_prime_UTR
CTAGACGACGCTGCTCCCTA+TGG 0.544397 3_3:+41620090 Msa0452620:CDS
GTCACTGCAAGTGTGTTGCT+TGG 0.544515 3_3:+41614146 Msa0452620:five_prime_UTR
ATAATTGATGGGATACACAT+TGG 0.547696 3_3:-41614326 None:intergenic
CAAGCTTCCTCATACAAAAG+TGG 0.548935 3_3:+41613926 Msa0452620:five_prime_UTR
AATATGTTAGAAACCCAAAT+CGG 0.552609 3_3:-41620873 None:intergenic
CGTCTAGCACAGAGGAAAAG+AGG 0.559719 3_3:-41620074 None:intergenic
CATTATACTTCAAAGGAGCA+TGG 0.562007 3_3:+41613646 Msa0452620:five_prime_UTR
GAGAGAAGCTGACGTTGTGT+TGG 0.562843 3_3:-41620003 None:intergenic
CTTAGTCTTCCTTACAAGCA+AGG 0.563134 3_3:+41613798 Msa0452620:five_prime_UTR
GTTAGGTTTGATTGAGAAAG+CGG 0.567281 3_3:+41613878 Msa0452620:five_prime_UTR
ATAGATCATATATAATTGAT+GGG 0.568260 3_3:-41614337 None:intergenic
CACTATACTTTAAAGGAGCA+TGG 0.570932 3_3:+41620445 Msa0452620:CDS
CCTTTATGACTAGCATGAAG+AGG 0.571406 3_3:+41613742 Msa0452620:five_prime_UTR
TCATCAAGAACAAGAAAGGA+TGG 0.572990 3_3:-41614217 None:intergenic
ATTGGGGTCGGAATTGAAGT+AGG 0.576372 3_3:-41620978 None:intergenic
GCTACAAAGTCTATCGGTAC+CGG 0.578270 3_3:-41614191 None:intergenic
AGTTAAGATCATCCAGCAAG+AGG 0.580534 3_3:-41614285 None:intergenic
CTAATGAAGCTAACCAAACA+GGG 0.582106 3_3:+41613529 Msa0452620:five_prime_UTR
TCTCAATGGCACCTCAGTCA+AGG 0.599345 3_3:+41613716 Msa0452620:five_prime_UTR
ATTATACTTCAAAGGAGCAT+GGG 0.601138 3_3:+41613647 Msa0452620:five_prime_UTR
TGATTGAGCTGCCACCGAGA+AGG 0.604903 3_3:-41620512 None:intergenic
GACAACTGTGGACCACCATA+GGG 0.607442 3_3:-41620105 None:intergenic
GCTACAAAGTCTATTGGGGT+CGG 0.608267 3_3:-41620990 None:intergenic
CTTGCTTGTAAGGAAGACTA+AGG 0.608424 3_3:-41613797 None:intergenic
CTTTCTTATAAGGAAGACGA+AGG 0.614295 3_3:-41620596 None:intergenic
TGGTCAGCTACAAAGTCTAT+CGG 0.616483 3_3:-41614197 None:intergenic
ATCACTTGATTTCATAAACA+AGG 0.616736 3_3:+41620218 Msa0452620:CDS
TTAGTGATGTTCTTTCACCT+GGG 0.623175 3_3:+41620385 Msa0452620:CDS
CCATGTAAGGAAGTGATAGT+GGG 0.625823 3_3:+41620732 Msa0452620:CDS
AGCAGCGTCGTCTAGCACAG+AGG 0.630122 3_3:-41620082 None:intergenic
CACAGAGGAAAAGAGGTGAG+AGG 0.632829 3_3:-41620067 None:intergenic
GAAATCAAGTGATCTGAGAG+TGG 0.639757 3_3:-41620208 None:intergenic
GACGACGCTGCTCCCTATGG+TGG 0.640142 3_3:+41620093 Msa0452620:CDS
TGTGTTGAAGGAGTTAGGAG+TGG 0.642269 3_3:+41614007 Msa0452620:five_prime_UTR
CACCGAGAAGGTGAAAATCA+CGG 0.643065 3_3:-41620500 None:intergenic
GTCAGCTACAAAGTCTATTG+GGG 0.647256 3_3:-41620994 None:intergenic
GTTAAGCTATTAATAGACCC+AGG 0.649350 3_3:-41620402 None:intergenic
AATTATGATCTACCAACAAG+AGG 0.656976 3_3:-41621086 None:intergenic
CAACACACTTGCAGTGACTG+CGG 0.666332 3_3:-41614141 None:intergenic
TGACTGAGGTGCCATTGAGA+AGG 0.673594 3_3:-41613713 None:intergenic
AATTAGCGATTGATTCGCGG+TGG 0.680650 3_3:-41619852 None:intergenic
AGCACAGTTTGGAATGACAA+CGG 0.681333 3_3:-41619952 None:intergenic
GTTAAACTATCAATCGACCC+AGG 0.695091 3_3:-41613603 None:intergenic
AAACTATCAATCGACCCAGG+TGG 0.713008 3_3:-41613600 None:intergenic
CATAAAGGGAACCTTGACTG+AGG 0.721556 3_3:-41613727 None:intergenic
GAGTTGACAAAAGACAACTG+TGG 0.761019 3_3:-41620117 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATGTAAATATTAATAAA+TGG - chr3_3:41616150-41616169 None:intergenic 10.0%
!!! ATTCAATTTAATTTTAATCT+TGG + chr3_3:41616352-41616371 Msa0452620:intron 10.0%
!!! AAATTTTATTGTTTTGTTTT+TGG + chr3_3:41616664-41616683 Msa0452620:intron 10.0%
!! TGTCAAAATTATATAAATTT+GGG - chr3_3:41616691-41616710 None:intergenic 10.0%
!! ATGTCAAAATTATATAAATT+TGG - chr3_3:41616692-41616711 None:intergenic 10.0%
!! TAAATATGATAAAAAAAAAG+AGG - chr3_3:41617018-41617037 None:intergenic 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! CAAAAAAAAAATGTATAATT+TGG - chr3_3:41617314-41617333 None:intergenic 10.0%
!!! AATTATACATTTTTTTTTTG+TGG + chr3_3:41617314-41617333 Msa0452620:intron 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!!! TTTAATTTGAGAATAAATAT+TGG + chr3_3:41619527-41619546 Msa0452620:intron 10.0%
!!! TTAATTTGAGAATAAATATT+GGG + chr3_3:41619528-41619547 Msa0452620:intron 10.0%
!! CATATGTAAATATTAATAAA+TGG - chr3_3:41616150-41616169 None:intergenic 10.0%
!!! ATTCAATTTAATTTTAATCT+TGG + chr3_3:41616352-41616371 Msa0452620:intron 10.0%
!!! AAATTTTATTGTTTTGTTTT+TGG + chr3_3:41616664-41616683 Msa0452620:intron 10.0%
!! TGTCAAAATTATATAAATTT+GGG - chr3_3:41616691-41616710 None:intergenic 10.0%
!! ATGTCAAAATTATATAAATT+TGG - chr3_3:41616692-41616711 None:intergenic 10.0%
!! TAAATATGATAAAAAAAAAG+AGG - chr3_3:41617018-41617037 None:intergenic 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! TTTAAGAATAAAATCATTTA+AGG + chr3_3:41617110-41617129 Msa0452620:intron 10.0%
!! CAAAAAAAAAATGTATAATT+TGG - chr3_3:41617314-41617333 None:intergenic 10.0%
!!! AATTATACATTTTTTTTTTG+TGG + chr3_3:41617314-41617333 Msa0452620:intron 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG - chr3_3:41618465-41618484 None:intergenic 10.0%
!!! TTTAATTTGAGAATAAATAT+TGG + chr3_3:41619527-41619546 Msa0452620:intron 10.0%
!!! TTAATTTGAGAATAAATATT+GGG + chr3_3:41619528-41619547 Msa0452620:intron 10.0%
!! TATATTTCATATTGTTGTAA+AGG + chr3_3:41613506-41613525 Msa0452620:five_prime_UTR 15.0%
!! ATAGATCATATATAATTGAT+GGG - chr3_3:41614340-41614359 None:intergenic 15.0%
!! TATAGATCATATATAATTGA+TGG - chr3_3:41614341-41614360 None:intergenic 15.0%
!!! CATATAGTTTTGATTTTAAA+TGG + chr3_3:41614414-41614433 Msa0452620:CDS 15.0%
!!! TTTTGATTTTAAATGGTTAT+TGG + chr3_3:41614421-41614440 Msa0452620:CDS 15.0%
!! TCTAAACTAAAAAATGAATT+AGG + chr3_3:41615819-41615838 Msa0452620:intron 15.0%
!!! CAAAACAATAAAATTTTAAG+AGG - chr3_3:41616660-41616679 None:intergenic 15.0%
!! TTAAAGTTAATGTCAAAATT+CGG - chr3_3:41616778-41616797 None:intergenic 15.0%
!! TTAAAATGTATAATTTGGTT+TGG - chr3_3:41617290-41617309 None:intergenic 15.0%
!!! TTGGTTTAAAATGTATAATT+TGG - chr3_3:41617295-41617314 None:intergenic 15.0%
!! ACAAATATATATAGAAAATG+CGG - chr3_3:41617480-41617499 None:intergenic 15.0%
!!! CTATTTTGAATTTTATAATC+CGG + chr3_3:41617904-41617923 Msa0452620:intron 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG - chr3_3:41618030-41618049 None:intergenic 15.0%
!!! ATATACTATTGATTATTGAT+TGG + chr3_3:41618661-41618680 Msa0452620:intron 15.0%
!!! ATTGATTTGAAGAAAAAAAT+TGG + chr3_3:41619422-41619441 Msa0452620:intron 15.0%
!!! TTGATTTGAAGAAAAAAATT+GGG + chr3_3:41619423-41619442 Msa0452620:intron 15.0%
!! AAAAGAAGGAAAATATATAT+AGG - chr3_3:41620246-41620265 None:intergenic 15.0%
!! TATATTTCATATTGTTGTAA+AGG + chr3_3:41613506-41613525 Msa0452620:five_prime_UTR 15.0%
!! ATAGATCATATATAATTGAT+GGG - chr3_3:41614340-41614359 None:intergenic 15.0%
!! TATAGATCATATATAATTGA+TGG - chr3_3:41614341-41614360 None:intergenic 15.0%
!!! CATATAGTTTTGATTTTAAA+TGG + chr3_3:41614414-41614433 Msa0452620:CDS 15.0%
!!! TTTTGATTTTAAATGGTTAT+TGG + chr3_3:41614421-41614440 Msa0452620:CDS 15.0%
!! TCTAAACTAAAAAATGAATT+AGG + chr3_3:41615819-41615838 Msa0452620:intron 15.0%
!!! CAAAACAATAAAATTTTAAG+AGG - chr3_3:41616660-41616679 None:intergenic 15.0%
!! TTAAAGTTAATGTCAAAATT+CGG - chr3_3:41616778-41616797 None:intergenic 15.0%
!! TTAAAATGTATAATTTGGTT+TGG - chr3_3:41617290-41617309 None:intergenic 15.0%
!!! TTGGTTTAAAATGTATAATT+TGG - chr3_3:41617295-41617314 None:intergenic 15.0%
!! ACAAATATATATAGAAAATG+CGG - chr3_3:41617480-41617499 None:intergenic 15.0%
!!! CTATTTTGAATTTTATAATC+CGG + chr3_3:41617904-41617923 Msa0452620:intron 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG - chr3_3:41618030-41618049 None:intergenic 15.0%
!!! ATATACTATTGATTATTGAT+TGG + chr3_3:41618661-41618680 Msa0452620:intron 15.0%
!!! ATTGATTTGAAGAAAAAAAT+TGG + chr3_3:41619422-41619441 Msa0452620:intron 15.0%
!!! TTGATTTGAAGAAAAAAATT+GGG + chr3_3:41619423-41619442 Msa0452620:intron 15.0%
!! AAAAGAAGGAAAATATATAT+AGG - chr3_3:41620246-41620265 None:intergenic 15.0%
!! TCAAAAGAAATATTGAATCT+TGG - chr3_3:41613972-41613991 None:intergenic 20.0%
!!! AATACTTTAGAAACACTAAT+TGG - chr3_3:41614077-41614096 None:intergenic 20.0%
!! ATAGTGTCAAGAATAAATAT+TGG + chr3_3:41614554-41614573 Msa0452620:intron 20.0%
!!! ATAAATATTGGTGTTTAAGT+TGG + chr3_3:41614566-41614585 Msa0452620:intron 20.0%
!! ATAAACAAAAAAAATGGTAG+TGG - chr3_3:41614917-41614936 None:intergenic 20.0%
!! AAAAATATGAAAGAGTAAGT+AGG - chr3_3:41614946-41614965 None:intergenic 20.0%
!!! ATTCTGCACATTTTTTTATT+CGG - chr3_3:41615210-41615229 None:intergenic 20.0%
!! TATTTGTAAATTCATGACAA+TGG - chr3_3:41615370-41615389 None:intergenic 20.0%
!! GAATTTACAAATATAACCAT+AGG + chr3_3:41615377-41615396 Msa0452620:intron 20.0%
!! TTCTTAGAAATCATCAATAT+GGG - chr3_3:41615431-41615450 None:intergenic 20.0%
!! TTTCTTAGAAATCATCAATA+TGG - chr3_3:41615432-41615451 None:intergenic 20.0%
!!! TGCTGAATTTTATTAAAACA+AGG + chr3_3:41615506-41615525 Msa0452620:intron 20.0%
!! AATAAATTCCTTAAGTCTTA+AGG - chr3_3:41616514-41616533 None:intergenic 20.0%
!!! ATTTTTTACCAATGTTAAGT+TGG + chr3_3:41616551-41616570 Msa0452620:intron 20.0%
!!! TTTTTTACCAATGTTAAGTT+GGG + chr3_3:41616552-41616571 Msa0452620:intron 20.0%
!! AAATTATCTTGAACTTTGTT+AGG - chr3_3:41616593-41616612 None:intergenic 20.0%
!! GGACTAAAATCAAAATTAAT+TGG + chr3_3:41616874-41616893 Msa0452620:intron 20.0%
!! TTATAACTACAGATAAAACT+AGG + chr3_3:41617035-41617054 Msa0452620:intron 20.0%
!!! TATACATTTTTTTTTTGTGG+TGG + chr3_3:41617317-41617336 Msa0452620:intron 20.0%
!! AACTTATTTAATATCTAACC+CGG - chr3_3:41617565-41617584 None:intergenic 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - chr3_3:41618224-41618243 None:intergenic 20.0%
!!! TGAATTTTTTCTGATTTTCT+TGG + chr3_3:41618224-41618243 Msa0452620:intron 20.0%
!!! GAATTTTTTCTGATTTTCTT+GGG + chr3_3:41618225-41618244 Msa0452620:intron 20.0%
!! ATATATATTGAGAATGAATG+TGG + chr3_3:41618417-41618436 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!!! TTTAGTTGTTACCTTTTTTA+GGG - chr3_3:41619602-41619621 None:intergenic 20.0%
!!! TCTAAGTTTAGATTTTCTTA+GGG - chr3_3:41619652-41619671 None:intergenic 20.0%
!!! TTCTAAGTTTAGATTTTCTT+AGG - chr3_3:41619653-41619672 None:intergenic 20.0%
!!! TTTTACTGTTCTAAAAAAGA+AGG - chr3_3:41620260-41620279 None:intergenic 20.0%
!! TTCATTGAAGTAAATGAAAA+AGG + chr3_3:41620906-41620925 Msa0452620:CDS 20.0%
!! TCAAAAGAAATATTGAATCT+TGG - chr3_3:41613972-41613991 None:intergenic 20.0%
!!! AATACTTTAGAAACACTAAT+TGG - chr3_3:41614077-41614096 None:intergenic 20.0%
!! ATAGTGTCAAGAATAAATAT+TGG + chr3_3:41614554-41614573 Msa0452620:intron 20.0%
!!! ATAAATATTGGTGTTTAAGT+TGG + chr3_3:41614566-41614585 Msa0452620:intron 20.0%
!! ATAAACAAAAAAAATGGTAG+TGG - chr3_3:41614917-41614936 None:intergenic 20.0%
!! AAAAATATGAAAGAGTAAGT+AGG - chr3_3:41614946-41614965 None:intergenic 20.0%
!!! ATTCTGCACATTTTTTTATT+CGG - chr3_3:41615210-41615229 None:intergenic 20.0%
!! TATTTGTAAATTCATGACAA+TGG - chr3_3:41615370-41615389 None:intergenic 20.0%
!! GAATTTACAAATATAACCAT+AGG + chr3_3:41615377-41615396 Msa0452620:intron 20.0%
!! TTCTTAGAAATCATCAATAT+GGG - chr3_3:41615431-41615450 None:intergenic 20.0%
!! TTTCTTAGAAATCATCAATA+TGG - chr3_3:41615432-41615451 None:intergenic 20.0%
!!! TGCTGAATTTTATTAAAACA+AGG + chr3_3:41615506-41615525 Msa0452620:intron 20.0%
!! AATAAATTCCTTAAGTCTTA+AGG - chr3_3:41616514-41616533 None:intergenic 20.0%
!!! ATTTTTTACCAATGTTAAGT+TGG + chr3_3:41616551-41616570 Msa0452620:intron 20.0%
!!! TTTTTTACCAATGTTAAGTT+GGG + chr3_3:41616552-41616571 Msa0452620:intron 20.0%
!! AAATTATCTTGAACTTTGTT+AGG - chr3_3:41616593-41616612 None:intergenic 20.0%
!! GGACTAAAATCAAAATTAAT+TGG + chr3_3:41616874-41616893 Msa0452620:intron 20.0%
!! TTATAACTACAGATAAAACT+AGG + chr3_3:41617035-41617054 Msa0452620:intron 20.0%
!!! TATACATTTTTTTTTTGTGG+TGG + chr3_3:41617317-41617336 Msa0452620:intron 20.0%
!! AACTTATTTAATATCTAACC+CGG - chr3_3:41617565-41617584 None:intergenic 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - chr3_3:41618224-41618243 None:intergenic 20.0%
!!! TGAATTTTTTCTGATTTTCT+TGG + chr3_3:41618224-41618243 Msa0452620:intron 20.0%
!!! GAATTTTTTCTGATTTTCTT+GGG + chr3_3:41618225-41618244 Msa0452620:intron 20.0%
!! ATATATATTGAGAATGAATG+TGG + chr3_3:41618417-41618436 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + chr3_3:41618603-41618622 Msa0452620:intron 20.0%
!!! TTTAGTTGTTACCTTTTTTA+GGG - chr3_3:41619602-41619621 None:intergenic 20.0%
!!! TCTAAGTTTAGATTTTCTTA+GGG - chr3_3:41619652-41619671 None:intergenic 20.0%
!!! TTCTAAGTTTAGATTTTCTT+AGG - chr3_3:41619653-41619672 None:intergenic 20.0%
!!! TTTTACTGTTCTAAAAAAGA+AGG - chr3_3:41620260-41620279 None:intergenic 20.0%
!! TTCATTGAAGTAAATGAAAA+AGG + chr3_3:41620906-41620925 Msa0452620:CDS 20.0%
! ACAAATGCATTATACTTCAA+AGG + chr3_3:41613639-41613658 Msa0452620:five_prime_UTR 25.0%
! ATGATTGAAGTAAATGAAGA+AGG + chr3_3:41614107-41614126 Msa0452620:five_prime_UTR 25.0%
! AACAAAGCTAGTATATGATA+AGG - chr3_3:41614840-41614859 None:intergenic 25.0%
!!! CTTTTTAAGCTCCTTTTTAA+GGG + chr3_3:41615169-41615188 Msa0452620:intron 25.0%
! AACATGGTTAGAATATCAAA+TGG + chr3_3:41615277-41615296 Msa0452620:intron 25.0%
!! AATGGATTTACAAACAACTA+AGG + chr3_3:41615295-41615314 Msa0452620:intron 25.0%
! ATGGATTTACAAACAACTAA+GGG + chr3_3:41615296-41615315 Msa0452620:intron 25.0%
!!! GTACTTTTGATTATTTCCTA+TGG - chr3_3:41615396-41615415 None:intergenic 25.0%
! TAAGAAATGTAAGTTTCAGA+TGG + chr3_3:41615445-41615464 Msa0452620:intron 25.0%
! TTCTATAACATAAGCAAAGA+AGG + chr3_3:41615922-41615941 Msa0452620:intron 25.0%
! AACCCAAAATATTACATTCA+GGG + chr3_3:41616019-41616038 Msa0452620:intron 25.0%
! CTTCATTCAATCTATAAATC+AGG - chr3_3:41616127-41616146 None:intergenic 25.0%
! AACATAAGATCTACATAACT+TGG + chr3_3:41616729-41616748 Msa0452620:intron 25.0%
! GAACCGAAACATAAAATATT+TGG + chr3_3:41616821-41616840 Msa0452620:intron 25.0%
!! GCTCCAAATATTTTATGTTT+CGG - chr3_3:41616827-41616846 None:intergenic 25.0%
!! AAACGAAAGGTTCTAATATA+GGG - chr3_3:41616927-41616946 None:intergenic 25.0%
!! AAAACGAAAGGTTCTAATAT+AGG - chr3_3:41616928-41616947 None:intergenic 25.0%
! GCTAAAAAGATTAAAACGAA+AGG - chr3_3:41616940-41616959 None:intergenic 25.0%
! TTTAAGGATTCTCATCTTTA+AGG + chr3_3:41617232-41617251 Msa0452620:intron 25.0%
! TGAGAATGTATAATTTGGTT+TGG - chr3_3:41617266-41617285 None:intergenic 25.0%
! TTGGATGAGAATGTATAATT+TGG - chr3_3:41617271-41617290 None:intergenic 25.0%
! TACATCTCTTTATTAGTACT+TGG + chr3_3:41617417-41617436 Msa0452620:intron 25.0%
!! TCTATCCGTATCTTTTTAAA+AGG + chr3_3:41617448-41617467 Msa0452620:intron 25.0%
!!! TAGGTCCTTTTAAAAAGATA+CGG - chr3_3:41617456-41617475 None:intergenic 25.0%
! TATATATAGAAAATGCGGAT+AGG - chr3_3:41617475-41617494 None:intergenic 25.0%
! ACTTATTTAATATCTAACCC+GGG - chr3_3:41617564-41617583 None:intergenic 25.0%
!!! TACACTTTTTATTCTTGCAT+TGG - chr3_3:41617728-41617747 None:intergenic 25.0%
! AGTAATAGTCCATGTTTAAA+GGG - chr3_3:41617795-41617814 None:intergenic 25.0%
! AAGTAATAGTCCATGTTTAA+AGG - chr3_3:41617796-41617815 None:intergenic 25.0%
!!! GCATTTTTGGAAATTTTACA+GGG - chr3_3:41617844-41617863 None:intergenic 25.0%
!!! GCATTCCAGATTTTAAAATT+CGG + chr3_3:41617870-41617889 Msa0452620:intron 25.0%
!!! TGAATCCGAATTTTAAAATC+TGG - chr3_3:41617878-41617897 None:intergenic 25.0%
! GATTATACATAAGAATTGTC+CGG - chr3_3:41617926-41617945 None:intergenic 25.0%
!! GATGGAATTTTAGATTTTGA+GGG + chr3_3:41618158-41618177 Msa0452620:intron 25.0%
!! ATGGAATTTTAGATTTTGAG+GGG + chr3_3:41618159-41618178 Msa0452620:intron 25.0%
! TTCTAAACATGTTTGTAACA+TGG - chr3_3:41618374-41618393 None:intergenic 25.0%
!!! GTTTAGTTTGTTACATCTTA+AGG - chr3_3:41619572-41619591 None:intergenic 25.0%
!!! TTAGTTGTTACCTTTTTTAG+GGG - chr3_3:41619601-41619620 None:intergenic 25.0%
!!! GTTTAGTTGTTACCTTTTTT+AGG - chr3_3:41619603-41619622 None:intergenic 25.0%
! CACAATTGAACGATATATTT+AGG + chr3_3:41619729-41619748 Msa0452620:intron 25.0%
!!! TGTTTTTGATAGCAAATGTT+TGG - chr3_3:41619902-41619921 None:intergenic 25.0%
! AGTATCAACAATTTCTTTGA+AGG - chr3_3:41620178-41620197 None:intergenic 25.0%
! ATCACTTGATTTCATAAACA+AGG + chr3_3:41620218-41620237 Msa0452620:CDS 25.0%
!! CAGTTTATAAATGCTTTTGA+TGG + chr3_3:41620564-41620583 Msa0452620:CDS 25.0%
!!! CCAGAATAAATTTTGAAATG+TGG - chr3_3:41620771-41620790 None:intergenic 25.0%
! CCACATTTCAAAATTTATTC+TGG + chr3_3:41620768-41620787 Msa0452620:CDS 25.0%
! AATATGTTAGAAACCCAAAT+CGG - chr3_3:41620876-41620895 None:intergenic 25.0%
! CTCTTATCAAAAACATGAAA+GGG - chr3_3:41621022-41621041 None:intergenic 25.0%
! TCTCTTATCAAAAACATGAA+AGG - chr3_3:41621023-41621042 None:intergenic 25.0%
! ACAAATGCATTATACTTCAA+AGG + chr3_3:41613639-41613658 Msa0452620:five_prime_UTR 25.0%
! ATGATTGAAGTAAATGAAGA+AGG + chr3_3:41614107-41614126 Msa0452620:five_prime_UTR 25.0%
! AACAAAGCTAGTATATGATA+AGG - chr3_3:41614840-41614859 None:intergenic 25.0%
!!! CTTTTTAAGCTCCTTTTTAA+GGG + chr3_3:41615169-41615188 Msa0452620:intron 25.0%
! AACATGGTTAGAATATCAAA+TGG + chr3_3:41615277-41615296 Msa0452620:intron 25.0%
!! AATGGATTTACAAACAACTA+AGG + chr3_3:41615295-41615314 Msa0452620:intron 25.0%
! ATGGATTTACAAACAACTAA+GGG + chr3_3:41615296-41615315 Msa0452620:intron 25.0%
!!! GTACTTTTGATTATTTCCTA+TGG - chr3_3:41615396-41615415 None:intergenic 25.0%
! TAAGAAATGTAAGTTTCAGA+TGG + chr3_3:41615445-41615464 Msa0452620:intron 25.0%
! TTCTATAACATAAGCAAAGA+AGG + chr3_3:41615922-41615941 Msa0452620:intron 25.0%
! AACCCAAAATATTACATTCA+GGG + chr3_3:41616019-41616038 Msa0452620:intron 25.0%
! CTTCATTCAATCTATAAATC+AGG - chr3_3:41616127-41616146 None:intergenic 25.0%
! AACATAAGATCTACATAACT+TGG + chr3_3:41616729-41616748 Msa0452620:intron 25.0%
! GAACCGAAACATAAAATATT+TGG + chr3_3:41616821-41616840 Msa0452620:intron 25.0%
!! GCTCCAAATATTTTATGTTT+CGG - chr3_3:41616827-41616846 None:intergenic 25.0%
!! AAACGAAAGGTTCTAATATA+GGG - chr3_3:41616927-41616946 None:intergenic 25.0%
!! AAAACGAAAGGTTCTAATAT+AGG - chr3_3:41616928-41616947 None:intergenic 25.0%
! GCTAAAAAGATTAAAACGAA+AGG - chr3_3:41616940-41616959 None:intergenic 25.0%
! TTTAAGGATTCTCATCTTTA+AGG + chr3_3:41617232-41617251 Msa0452620:intron 25.0%
! TGAGAATGTATAATTTGGTT+TGG - chr3_3:41617266-41617285 None:intergenic 25.0%
! TTGGATGAGAATGTATAATT+TGG - chr3_3:41617271-41617290 None:intergenic 25.0%
! TACATCTCTTTATTAGTACT+TGG + chr3_3:41617417-41617436 Msa0452620:intron 25.0%
!! TCTATCCGTATCTTTTTAAA+AGG + chr3_3:41617448-41617467 Msa0452620:intron 25.0%
!!! TAGGTCCTTTTAAAAAGATA+CGG - chr3_3:41617456-41617475 None:intergenic 25.0%
! TATATATAGAAAATGCGGAT+AGG - chr3_3:41617475-41617494 None:intergenic 25.0%
! ACTTATTTAATATCTAACCC+GGG - chr3_3:41617564-41617583 None:intergenic 25.0%
!!! TACACTTTTTATTCTTGCAT+TGG - chr3_3:41617728-41617747 None:intergenic 25.0%
! AGTAATAGTCCATGTTTAAA+GGG - chr3_3:41617795-41617814 None:intergenic 25.0%
! AAGTAATAGTCCATGTTTAA+AGG - chr3_3:41617796-41617815 None:intergenic 25.0%
!!! GCATTTTTGGAAATTTTACA+GGG - chr3_3:41617844-41617863 None:intergenic 25.0%
!!! GCATTCCAGATTTTAAAATT+CGG + chr3_3:41617870-41617889 Msa0452620:intron 25.0%
!!! TGAATCCGAATTTTAAAATC+TGG - chr3_3:41617878-41617897 None:intergenic 25.0%
! GATTATACATAAGAATTGTC+CGG - chr3_3:41617926-41617945 None:intergenic 25.0%
!! GATGGAATTTTAGATTTTGA+GGG + chr3_3:41618158-41618177 Msa0452620:intron 25.0%
!! ATGGAATTTTAGATTTTGAG+GGG + chr3_3:41618159-41618178 Msa0452620:intron 25.0%
! TTCTAAACATGTTTGTAACA+TGG - chr3_3:41618374-41618393 None:intergenic 25.0%
!!! GTTTAGTTTGTTACATCTTA+AGG - chr3_3:41619572-41619591 None:intergenic 25.0%
!!! TTAGTTGTTACCTTTTTTAG+GGG - chr3_3:41619601-41619620 None:intergenic 25.0%
!!! GTTTAGTTGTTACCTTTTTT+AGG - chr3_3:41619603-41619622 None:intergenic 25.0%
! CACAATTGAACGATATATTT+AGG + chr3_3:41619729-41619748 Msa0452620:intron 25.0%
!!! TGTTTTTGATAGCAAATGTT+TGG - chr3_3:41619902-41619921 None:intergenic 25.0%
! AGTATCAACAATTTCTTTGA+AGG - chr3_3:41620178-41620197 None:intergenic 25.0%
! ATCACTTGATTTCATAAACA+AGG + chr3_3:41620218-41620237 Msa0452620:CDS 25.0%
!! CAGTTTATAAATGCTTTTGA+TGG + chr3_3:41620564-41620583 Msa0452620:CDS 25.0%
!!! CCAGAATAAATTTTGAAATG+TGG - chr3_3:41620771-41620790 None:intergenic 25.0%
! CCACATTTCAAAATTTATTC+TGG + chr3_3:41620768-41620787 Msa0452620:CDS 25.0%
! AATATGTTAGAAACCCAAAT+CGG - chr3_3:41620876-41620895 None:intergenic 25.0%
! CTCTTATCAAAAACATGAAA+GGG - chr3_3:41621022-41621041 None:intergenic 25.0%
! TCTCTTATCAAAAACATGAA+AGG - chr3_3:41621023-41621042 None:intergenic 25.0%
TAACCAAACAGGGAATTTAT+GGG + chr3_3:41613539-41613558 Msa0452620:five_prime_UTR 30.0%
! ATTATACTTCAAAGGAGCAT+GGG + chr3_3:41613647-41613666 Msa0452620:five_prime_UTR 30.0%
TGAAATTTCTGATGTGTTGA+AGG + chr3_3:41613995-41614014 Msa0452620:five_prime_UTR 30.0%
TCTTGATGAGAAGAATTATC+TGG + chr3_3:41614231-41614250 Msa0452620:five_prime_UTR 30.0%
ATAATTGATGGGATACACAT+TGG - chr3_3:41614329-41614348 None:intergenic 30.0%
! CAGCACTATTTTATAGGAAA+AGG - chr3_3:41614595-41614614 None:intergenic 30.0%
! AATCTGCAGCACTATTTTAT+AGG - chr3_3:41614601-41614620 None:intergenic 30.0%
! TAAAATAGTGCTGCAGATTT+TGG + chr3_3:41614602-41614621 Msa0452620:intron 30.0%
! AAAATAGTGCTGCAGATTTT+GGG + chr3_3:41614603-41614622 Msa0452620:intron 30.0%
!! AGTTTTGATGTCTTATTGCA+TGG + chr3_3:41614662-41614681 Msa0452620:intron 30.0%
ATGCTTGGAAAAAGAAAAAC+TGG - chr3_3:41614747-41614766 None:intergenic 30.0%
ATTCAGCACATATTTATGCT+TGG - chr3_3:41614762-41614781 None:intergenic 30.0%
AATGCAACATCATAAAAAGG+CGG - chr3_3:41614970-41614989 None:intergenic 30.0%
GTCAATGCAACATCATAAAA+AGG - chr3_3:41614973-41614992 None:intergenic 30.0%
CCTTAAAAAGGAGCTTAAAA+AGG - chr3_3:41615171-41615190 None:intergenic 30.0%
!! CCTTTTTAAGCTCCTTTTTA+AGG + chr3_3:41615168-41615187 Msa0452620:intron 30.0%
!! TTTAACTTGTGCCCTTAAAA+AGG - chr3_3:41615183-41615202 None:intergenic 30.0%
!!! CCTTTGTCTCTTTGTTTTAT+TGG - chr3_3:41615548-41615567 None:intergenic 30.0%
CCAATAAAACAAAGAGACAA+AGG + chr3_3:41615545-41615564 Msa0452620:intron 30.0%
GAACCCAAAATATTACATTC+AGG + chr3_3:41616018-41616037 Msa0452620:intron 30.0%
ACCCAAAATATTACATTCAG+GGG + chr3_3:41616020-41616039 Msa0452620:intron 30.0%
! ACCCCTGAATGTAATATTTT+GGG - chr3_3:41616024-41616043 None:intergenic 30.0%
! TACCCCTGAATGTAATATTT+TGG - chr3_3:41616025-41616044 None:intergenic 30.0%
TTTATCTACAAGCATCTTGA+AGG - chr3_3:41616274-41616293 None:intergenic 30.0%
GAATGAAAATAGTCGTGTTA+TGG - chr3_3:41616447-41616466 None:intergenic 30.0%
ATGTATGTATGATTGAGACA+AGG + chr3_3:41616467-41616486 Msa0452620:intron 30.0%
ACACAAAACCTTAAGACTTA+AGG + chr3_3:41616503-41616522 Msa0452620:intron 30.0%
TTGTTAACCCAACTTAACAT+TGG - chr3_3:41616562-41616581 None:intergenic 30.0%
!! AATGTTAAGTTGGGTTAACA+AGG + chr3_3:41616561-41616580 Msa0452620:intron 30.0%
TATCTTGAACTTTGTTAGGT+TGG - chr3_3:41616589-41616608 None:intergenic 30.0%
CTTATGTTCAAGAAATGCTA+AGG - chr3_3:41616717-41616736 None:intergenic 30.0%
!!! GCATCTTGGTTTTAAGTTTA+TGG + chr3_3:41616853-41616872 Msa0452620:intron 30.0%
TGAACAGTTTGCACTTTAAA+AGG - chr3_3:41616971-41616990 None:intergenic 30.0%
!!! CATTTTTTTTTTGTGGTGGA+CGG + chr3_3:41617321-41617340 Msa0452620:intron 30.0%
!!! ATTTTTTTTTTGTGGTGGAC+GGG + chr3_3:41617322-41617341 Msa0452620:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr3_3:41617362-41617381 None:intergenic 30.0%
CAATAATGAATTAGTCCAAG+TGG + chr3_3:41617755-41617774 Msa0452620:intron 30.0%
!! GGCATTTTTGGAAATTTTAC+AGG - chr3_3:41617845-41617864 None:intergenic 30.0%
! TTAAAATCTGGAATGCACAA+GGG - chr3_3:41617866-41617885 None:intergenic 30.0%
! TTTAAAATCTGGAATGCACA+AGG - chr3_3:41617867-41617886 None:intergenic 30.0%
! CGATGGAATTTTAGATTTTG+AGG + chr3_3:41618157-41618176 Msa0452620:intron 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG - chr3_3:41618287-41618306 None:intergenic 30.0%
!! GTAACATGGATAGTCATTTT+AGG - chr3_3:41618360-41618379 None:intergenic 30.0%
! AACTTTTGATCTTATGCACT+CGG - chr3_3:41618528-41618547 None:intergenic 30.0%
AAACTAAACTCCCCTAAAAA+AGG + chr3_3:41619588-41619607 Msa0452620:intron 30.0%
! TAGATTTTCTTAGGGACTAT+CGG - chr3_3:41619644-41619663 None:intergenic 30.0%
!! TTAAATTAGCGATTGATTCG+CGG - chr3_3:41619858-41619877 None:intergenic 30.0%
! CAACAATTTCTTTGAAGGAA+GGG - chr3_3:41620173-41620192 None:intergenic 30.0%
! TCAACAATTTCTTTGAAGGA+AGG - chr3_3:41620174-41620193 None:intergenic 30.0%
TATATTTGATGCTGTCGTAA+AGG + chr3_3:41620305-41620324 Msa0452620:intron 30.0%
!!! CCATACATTCACTTTTTTGA+CGG - chr3_3:41620340-41620359 None:intergenic 30.0%
CGTCAAAAAAGTGAATGTAT+GGG + chr3_3:41620338-41620357 Msa0452620:CDS 30.0%
GCTAATGCACTATACTTTAA+AGG + chr3_3:41620438-41620457 Msa0452620:CDS 30.0%
!!! TTTGTTTTTGACGCATCAAA+TGG - chr3_3:41620477-41620496 None:intergenic 30.0%
! TTCTTTTTGCTAGTCATGAA+GGG - chr3_3:41620543-41620562 None:intergenic 30.0%
ATATCGTTGCCTTTCTTATA+AGG - chr3_3:41620609-41620628 None:intergenic 30.0%
AGTTTGTGTTTCAAAATCTC+AGG - chr3_3:41620711-41620730 None:intergenic 30.0%
TGAACTTTCTAATGTGTCAA+AGG + chr3_3:41620794-41620813 Msa0452620:CDS 30.0%
TTATCAAAAACATGAAAGGG+TGG - chr3_3:41621019-41621038 None:intergenic 30.0%
TAACCAAACAGGGAATTTAT+GGG + chr3_3:41613539-41613558 Msa0452620:five_prime_UTR 30.0%
! ATTATACTTCAAAGGAGCAT+GGG + chr3_3:41613647-41613666 Msa0452620:five_prime_UTR 30.0%
TGAAATTTCTGATGTGTTGA+AGG + chr3_3:41613995-41614014 Msa0452620:five_prime_UTR 30.0%
TCTTGATGAGAAGAATTATC+TGG + chr3_3:41614231-41614250 Msa0452620:five_prime_UTR 30.0%
ATAATTGATGGGATACACAT+TGG - chr3_3:41614329-41614348 None:intergenic 30.0%
! CAGCACTATTTTATAGGAAA+AGG - chr3_3:41614595-41614614 None:intergenic 30.0%
! AATCTGCAGCACTATTTTAT+AGG - chr3_3:41614601-41614620 None:intergenic 30.0%
! TAAAATAGTGCTGCAGATTT+TGG + chr3_3:41614602-41614621 Msa0452620:intron 30.0%
! AAAATAGTGCTGCAGATTTT+GGG + chr3_3:41614603-41614622 Msa0452620:intron 30.0%
!! AGTTTTGATGTCTTATTGCA+TGG + chr3_3:41614662-41614681 Msa0452620:intron 30.0%
ATGCTTGGAAAAAGAAAAAC+TGG - chr3_3:41614747-41614766 None:intergenic 30.0%
ATTCAGCACATATTTATGCT+TGG - chr3_3:41614762-41614781 None:intergenic 30.0%
AATGCAACATCATAAAAAGG+CGG - chr3_3:41614970-41614989 None:intergenic 30.0%
GTCAATGCAACATCATAAAA+AGG - chr3_3:41614973-41614992 None:intergenic 30.0%
CCTTAAAAAGGAGCTTAAAA+AGG - chr3_3:41615171-41615190 None:intergenic 30.0%
!! CCTTTTTAAGCTCCTTTTTA+AGG + chr3_3:41615168-41615187 Msa0452620:intron 30.0%
!! TTTAACTTGTGCCCTTAAAA+AGG - chr3_3:41615183-41615202 None:intergenic 30.0%
!!! CCTTTGTCTCTTTGTTTTAT+TGG - chr3_3:41615548-41615567 None:intergenic 30.0%
CCAATAAAACAAAGAGACAA+AGG + chr3_3:41615545-41615564 Msa0452620:intron 30.0%
GAACCCAAAATATTACATTC+AGG + chr3_3:41616018-41616037 Msa0452620:intron 30.0%
ACCCAAAATATTACATTCAG+GGG + chr3_3:41616020-41616039 Msa0452620:intron 30.0%
! ACCCCTGAATGTAATATTTT+GGG - chr3_3:41616024-41616043 None:intergenic 30.0%
! TACCCCTGAATGTAATATTT+TGG - chr3_3:41616025-41616044 None:intergenic 30.0%
TTTATCTACAAGCATCTTGA+AGG - chr3_3:41616274-41616293 None:intergenic 30.0%
GAATGAAAATAGTCGTGTTA+TGG - chr3_3:41616447-41616466 None:intergenic 30.0%
ATGTATGTATGATTGAGACA+AGG + chr3_3:41616467-41616486 Msa0452620:intron 30.0%
ACACAAAACCTTAAGACTTA+AGG + chr3_3:41616503-41616522 Msa0452620:intron 30.0%
TTGTTAACCCAACTTAACAT+TGG - chr3_3:41616562-41616581 None:intergenic 30.0%
!! AATGTTAAGTTGGGTTAACA+AGG + chr3_3:41616561-41616580 Msa0452620:intron 30.0%
TATCTTGAACTTTGTTAGGT+TGG - chr3_3:41616589-41616608 None:intergenic 30.0%
CTTATGTTCAAGAAATGCTA+AGG - chr3_3:41616717-41616736 None:intergenic 30.0%
!!! GCATCTTGGTTTTAAGTTTA+TGG + chr3_3:41616853-41616872 Msa0452620:intron 30.0%
TGAACAGTTTGCACTTTAAA+AGG - chr3_3:41616971-41616990 None:intergenic 30.0%
!!! CATTTTTTTTTTGTGGTGGA+CGG + chr3_3:41617321-41617340 Msa0452620:intron 30.0%
!!! ATTTTTTTTTTGTGGTGGAC+GGG + chr3_3:41617322-41617341 Msa0452620:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr3_3:41617362-41617381 None:intergenic 30.0%
CAATAATGAATTAGTCCAAG+TGG + chr3_3:41617755-41617774 Msa0452620:intron 30.0%
!! GGCATTTTTGGAAATTTTAC+AGG - chr3_3:41617845-41617864 None:intergenic 30.0%
! TTAAAATCTGGAATGCACAA+GGG - chr3_3:41617866-41617885 None:intergenic 30.0%
! TTTAAAATCTGGAATGCACA+AGG - chr3_3:41617867-41617886 None:intergenic 30.0%
! CGATGGAATTTTAGATTTTG+AGG + chr3_3:41618157-41618176 Msa0452620:intron 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG - chr3_3:41618287-41618306 None:intergenic 30.0%
!! GTAACATGGATAGTCATTTT+AGG - chr3_3:41618360-41618379 None:intergenic 30.0%
! AACTTTTGATCTTATGCACT+CGG - chr3_3:41618528-41618547 None:intergenic 30.0%
AAACTAAACTCCCCTAAAAA+AGG + chr3_3:41619588-41619607 Msa0452620:intron 30.0%
! TAGATTTTCTTAGGGACTAT+CGG - chr3_3:41619644-41619663 None:intergenic 30.0%
!! TTAAATTAGCGATTGATTCG+CGG - chr3_3:41619858-41619877 None:intergenic 30.0%
! CAACAATTTCTTTGAAGGAA+GGG - chr3_3:41620173-41620192 None:intergenic 30.0%
! TCAACAATTTCTTTGAAGGA+AGG - chr3_3:41620174-41620193 None:intergenic 30.0%
TATATTTGATGCTGTCGTAA+AGG + chr3_3:41620305-41620324 Msa0452620:intron 30.0%
!!! CCATACATTCACTTTTTTGA+CGG - chr3_3:41620340-41620359 None:intergenic 30.0%
CGTCAAAAAAGTGAATGTAT+GGG + chr3_3:41620338-41620357 Msa0452620:CDS 30.0%
GCTAATGCACTATACTTTAA+AGG + chr3_3:41620438-41620457 Msa0452620:CDS 30.0%
!!! TTTGTTTTTGACGCATCAAA+TGG - chr3_3:41620477-41620496 None:intergenic 30.0%
! TTCTTTTTGCTAGTCATGAA+GGG - chr3_3:41620543-41620562 None:intergenic 30.0%
ATATCGTTGCCTTTCTTATA+AGG - chr3_3:41620609-41620628 None:intergenic 30.0%
AGTTTGTGTTTCAAAATCTC+AGG - chr3_3:41620711-41620730 None:intergenic 30.0%
TGAACTTTCTAATGTGTCAA+AGG + chr3_3:41620794-41620813 Msa0452620:CDS 30.0%
TTATCAAAAACATGAAAGGG+TGG - chr3_3:41621019-41621038 None:intergenic 30.0%
CTAATGAAGCTAACCAAACA+GGG + chr3_3:41613529-41613548 Msa0452620:five_prime_UTR 35.0%
CTAACCAAACAGGGAATTTA+TGG + chr3_3:41613538-41613557 Msa0452620:five_prime_UTR 35.0%
! ATTCGTAATTTTCTTCCACC+TGG + chr3_3:41613585-41613604 Msa0452620:five_prime_UTR 35.0%
! TTCGTAATTTTCTTCCACCT+GGG + chr3_3:41613586-41613605 Msa0452620:five_prime_UTR 35.0%
CATTATACTTCAAAGGAGCA+TGG + chr3_3:41613646-41613665 Msa0452620:five_prime_UTR 35.0%
! TACGATTTTCACCTTCTCAA+TGG + chr3_3:41613702-41613721 Msa0452620:five_prime_UTR 35.0%
CTCTTCATGCTAGTCATAAA+GGG - chr3_3:41613744-41613763 None:intergenic 35.0%
! CAGTTTATCAGTGCTTTTGA+TGG + chr3_3:41613765-41613784 Msa0452620:five_prime_UTR 35.0%
TTTCTTCCAGATGCAAAAGA+TGG + chr3_3:41613852-41613871 Msa0452620:five_prime_UTR 35.0%
TTCTTCCAGATGCAAAAGAT+GGG + chr3_3:41613853-41613872 Msa0452620:five_prime_UTR 35.0%
GTTAGGTTTGATTGAGAAAG+CGG + chr3_3:41613878-41613897 Msa0452620:five_prime_UTR 35.0%
!! GTGGTTTTACCTTTCTCTAT+TGG + chr3_3:41614026-41614045 Msa0452620:five_prime_UTR 35.0%
! GTTTTACCTTTCTCTATTGG+AGG + chr3_3:41614029-41614048 Msa0452620:five_prime_UTR 35.0%
TGGAGGTTTGACAAAAATAG+TGG + chr3_3:41614046-41614065 Msa0452620:five_prime_UTR 35.0%
TCATCAAGAACAAGAAAGGA+TGG - chr3_3:41614220-41614239 None:intergenic 35.0%
CTTCTCATCAAGAACAAGAA+AGG - chr3_3:41614224-41614243 None:intergenic 35.0%
TCTGGTACAATACTCTTTGT+TGG + chr3_3:41614249-41614268 Msa0452620:five_prime_UTR 35.0%
CTGGTACAATACTCTTTGTT+GGG + chr3_3:41614250-41614269 Msa0452620:five_prime_UTR 35.0%
!! GCTTTGCTTCATGTTTTGAA+CGG + chr3_3:41614370-41614389 Msa0452620:CDS 35.0%
TCCATGACGCTGAAATATTA+GGG + chr3_3:41614477-41614496 Msa0452620:intron 35.0%
TCATTGCAATTTGCAACAGT+TGG + chr3_3:41614529-41614548 Msa0452620:intron 35.0%
! AAATAGTGCTGCAGATTTTG+GGG + chr3_3:41614604-41614623 Msa0452620:intron 35.0%
! TCCATTACTATTCGAGTTCA+TGG + chr3_3:41614805-41614824 Msa0452620:intron 35.0%
ACCATGAACTCGAATAGTAA+TGG - chr3_3:41614809-41614828 None:intergenic 35.0%
ACAAAGTGAACGAGAATCAA+GGG - chr3_3:41614865-41614884 None:intergenic 35.0%
AACAAAGTGAACGAGAATCA+AGG - chr3_3:41614866-41614885 None:intergenic 35.0%
!! AAAAAATGGTAGTGGATGCA+GGG - chr3_3:41614909-41614928 None:intergenic 35.0%
!! AAAAAAATGGTAGTGGATGC+AGG - chr3_3:41614910-41614929 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + chr3_3:41615039-41615058 Msa0452620:intron 35.0%
ATGATTACGAGCAAGAGTTA+AGG + chr3_3:41615245-41615264 Msa0452620:intron 35.0%
GTTAAGGAAACTGAGAAACA+TGG + chr3_3:41615261-41615280 Msa0452620:intron 35.0%
! ACATTCACTTGTTACGAGAA+AGG - chr3_3:41615590-41615609 None:intergenic 35.0%
TGTGAACCAGAGAATTCAAA+TGG + chr3_3:41615633-41615652 Msa0452620:intron 35.0%
GTGAACCAGAGAATTCAAAT+GGG + chr3_3:41615634-41615653 Msa0452620:intron 35.0%
TTTAGCCCATTTGAATTCTC+TGG - chr3_3:41615642-41615661 None:intergenic 35.0%
TTATGAAGTCTTCACTCATG+AGG - chr3_3:41615772-41615791 None:intergenic 35.0%
TTTAATCGCGTCTCAAAATG+AGG - chr3_3:41615995-41616014 None:intergenic 35.0%
!!! ATTTTGAGACGCGATTAAAC+TGG + chr3_3:41615996-41616015 Msa0452620:intron 35.0%
CACATCTCTCTTATTAACAG+TGG - chr3_3:41616053-41616072 None:intergenic 35.0%
TACAAGCATCTTGAAGGATT+TGG - chr3_3:41616268-41616287 None:intergenic 35.0%
TTACTTAGAAAAGGATGCAG+CGG - chr3_3:41616624-41616643 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGACG+GGG + chr3_3:41617323-41617342 Msa0452620:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - chr3_3:41617355-41617374 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG - chr3_3:41617356-41617375 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - chr3_3:41617357-41617376 None:intergenic 35.0%
! ATCTAACTAGTTTAGAGACC+CGG + chr3_3:41617533-41617552 Msa0452620:intron 35.0%
! AGTCCAAGTGGTAATAGTTT+TGG + chr3_3:41617767-41617786 Msa0452620:intron 35.0%
! GTCCAAGTGGTAATAGTTTT+GGG + chr3_3:41617768-41617787 Msa0452620:intron 35.0%
TGAAAAATGGGTCTAAACGA+TGG + chr3_3:41618140-41618159 Msa0452620:intron 35.0%
! CTGATTTTCTTGGGAAGTTT+CGG + chr3_3:41618234-41618253 Msa0452620:intron 35.0%
! TAGTCAAAAATCGGGTTTTC+TGG - chr3_3:41618278-41618297 None:intergenic 35.0%
CCTGTTCTTAGTCAAAAATC+GGG - chr3_3:41618286-41618305 None:intergenic 35.0%
AACAATGACCCAAAAACAGA+AGG + chr3_3:41618307-41618326 Msa0452620:intron 35.0%
!! ACTCTCATCCTTCTGTTTTT+GGG - chr3_3:41618318-41618337 None:intergenic 35.0%
! AACTCTCATCCTTCTGTTTT+TGG - chr3_3:41618319-41618338 None:intergenic 35.0%
AAAACAGAAGGATGAGAGTT+AGG + chr3_3:41618319-41618338 Msa0452620:intron 35.0%
GAGGTGTATTTAGACTTCTA+GGG - chr3_3:41619704-41619723 None:intergenic 35.0%
! AGAGGTGTATTTAGACTTCT+AGG - chr3_3:41619705-41619724 None:intergenic 35.0%
!! AATGGATTTTGATCCAAGGA+AGG - chr3_3:41620028-41620047 None:intergenic 35.0%
! TGTCTTTTGTCAACTCTGTT+TGG + chr3_3:41620124-41620143 Msa0452620:CDS 35.0%
CCGTCAAAAAAGTGAATGTA+TGG + chr3_3:41620337-41620356 Msa0452620:CDS 35.0%
TGGGCAAAAAAAGAGACAAA+CGG + chr3_3:41620357-41620376 Msa0452620:CDS 35.0%
ATTAGTGATGTTCTTTCACC+TGG + chr3_3:41620384-41620403 Msa0452620:CDS 35.0%
TTAGTGATGTTCTTTCACCT+GGG + chr3_3:41620385-41620404 Msa0452620:CDS 35.0%
GTTAAGCTATTAATAGACCC+AGG - chr3_3:41620405-41620424 None:intergenic 35.0%
! CACTATACTTTAAAGGAGCA+TGG + chr3_3:41620445-41620464 Msa0452620:CDS 35.0%
! CTTCTTTTTGCTAGTCATGA+AGG - chr3_3:41620544-41620563 None:intergenic 35.0%
CTTTCTTATAAGGAAGACGA+AGG - chr3_3:41620599-41620618 None:intergenic 35.0%
CTTCGTCTTCCTTATAAGAA+AGG + chr3_3:41620597-41620616 Msa0452620:CDS 35.0%
TAACAATCCATCTCTTGCAT+CGG - chr3_3:41620661-41620680 None:intergenic 35.0%
!! GTTAGCTTTGATTGAGAAAG+TGG + chr3_3:41620677-41620696 Msa0452620:CDS 35.0%
GTGTTTCAAAATCTCAGGTT+TGG - chr3_3:41620706-41620725 None:intergenic 35.0%
GAAACACAAACTTCCATGTA+AGG + chr3_3:41620719-41620738 Msa0452620:CDS 35.0%
TTCTAATGTGTCAAAGGAGT+TGG + chr3_3:41620800-41620819 Msa0452620:CDS 35.0%
TCTAATGTGTCAAAGGAGTT+GGG + chr3_3:41620801-41620820 Msa0452620:CDS 35.0%
!! GTTGTTTTACCTTTCTCTGA+CGG + chr3_3:41620825-41620844 Msa0452620:CDS 35.0%
TTGATAAGAGACGATTTGTC+TGG + chr3_3:41621032-41621051 Msa0452620:CDS 35.0%
TCTGGTACAATACTCTTTGT+TGG + chr3_3:41614249-41614268 Msa0452620:five_prime_UTR 35.0%
CTAATGAAGCTAACCAAACA+GGG + chr3_3:41613529-41613548 Msa0452620:five_prime_UTR 35.0%
CTAACCAAACAGGGAATTTA+TGG + chr3_3:41613538-41613557 Msa0452620:five_prime_UTR 35.0%
! ATTCGTAATTTTCTTCCACC+TGG + chr3_3:41613585-41613604 Msa0452620:five_prime_UTR 35.0%
! TTCGTAATTTTCTTCCACCT+GGG + chr3_3:41613586-41613605 Msa0452620:five_prime_UTR 35.0%
CATTATACTTCAAAGGAGCA+TGG + chr3_3:41613646-41613665 Msa0452620:five_prime_UTR 35.0%
! TACGATTTTCACCTTCTCAA+TGG + chr3_3:41613702-41613721 Msa0452620:five_prime_UTR 35.0%
CTCTTCATGCTAGTCATAAA+GGG - chr3_3:41613744-41613763 None:intergenic 35.0%
! CAGTTTATCAGTGCTTTTGA+TGG + chr3_3:41613765-41613784 Msa0452620:five_prime_UTR 35.0%
TTTCTTCCAGATGCAAAAGA+TGG + chr3_3:41613852-41613871 Msa0452620:five_prime_UTR 35.0%
TTCTTCCAGATGCAAAAGAT+GGG + chr3_3:41613853-41613872 Msa0452620:five_prime_UTR 35.0%
GTTAGGTTTGATTGAGAAAG+CGG + chr3_3:41613878-41613897 Msa0452620:five_prime_UTR 35.0%
!! GTGGTTTTACCTTTCTCTAT+TGG + chr3_3:41614026-41614045 Msa0452620:five_prime_UTR 35.0%
! GTTTTACCTTTCTCTATTGG+AGG + chr3_3:41614029-41614048 Msa0452620:five_prime_UTR 35.0%
TGGAGGTTTGACAAAAATAG+TGG + chr3_3:41614046-41614065 Msa0452620:five_prime_UTR 35.0%
TCATCAAGAACAAGAAAGGA+TGG - chr3_3:41614220-41614239 None:intergenic 35.0%
CTTCTCATCAAGAACAAGAA+AGG - chr3_3:41614224-41614243 None:intergenic 35.0%
TCTGGTACAATACTCTTTGT+TGG + chr3_3:41614249-41614268 Msa0452620:five_prime_UTR 35.0%
CTGGTACAATACTCTTTGTT+GGG + chr3_3:41614250-41614269 Msa0452620:five_prime_UTR 35.0%
!! GCTTTGCTTCATGTTTTGAA+CGG + chr3_3:41614370-41614389 Msa0452620:CDS 35.0%
TCCATGACGCTGAAATATTA+GGG + chr3_3:41614477-41614496 Msa0452620:intron 35.0%
TCATTGCAATTTGCAACAGT+TGG + chr3_3:41614529-41614548 Msa0452620:intron 35.0%
! AAATAGTGCTGCAGATTTTG+GGG + chr3_3:41614604-41614623 Msa0452620:intron 35.0%
! TCCATTACTATTCGAGTTCA+TGG + chr3_3:41614805-41614824 Msa0452620:intron 35.0%
ACCATGAACTCGAATAGTAA+TGG - chr3_3:41614809-41614828 None:intergenic 35.0%
ACAAAGTGAACGAGAATCAA+GGG - chr3_3:41614865-41614884 None:intergenic 35.0%
AACAAAGTGAACGAGAATCA+AGG - chr3_3:41614866-41614885 None:intergenic 35.0%
!! AAAAAATGGTAGTGGATGCA+GGG - chr3_3:41614909-41614928 None:intergenic 35.0%
!! AAAAAAATGGTAGTGGATGC+AGG - chr3_3:41614910-41614929 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + chr3_3:41615039-41615058 Msa0452620:intron 35.0%
ATGATTACGAGCAAGAGTTA+AGG + chr3_3:41615245-41615264 Msa0452620:intron 35.0%
GTTAAGGAAACTGAGAAACA+TGG + chr3_3:41615261-41615280 Msa0452620:intron 35.0%
! ACATTCACTTGTTACGAGAA+AGG - chr3_3:41615590-41615609 None:intergenic 35.0%
TGTGAACCAGAGAATTCAAA+TGG + chr3_3:41615633-41615652 Msa0452620:intron 35.0%
GTGAACCAGAGAATTCAAAT+GGG + chr3_3:41615634-41615653 Msa0452620:intron 35.0%
TTTAGCCCATTTGAATTCTC+TGG - chr3_3:41615642-41615661 None:intergenic 35.0%
TTATGAAGTCTTCACTCATG+AGG - chr3_3:41615772-41615791 None:intergenic 35.0%
TTTAATCGCGTCTCAAAATG+AGG - chr3_3:41615995-41616014 None:intergenic 35.0%
!!! ATTTTGAGACGCGATTAAAC+TGG + chr3_3:41615996-41616015 Msa0452620:intron 35.0%
CACATCTCTCTTATTAACAG+TGG - chr3_3:41616053-41616072 None:intergenic 35.0%
TACAAGCATCTTGAAGGATT+TGG - chr3_3:41616268-41616287 None:intergenic 35.0%
TTACTTAGAAAAGGATGCAG+CGG - chr3_3:41616624-41616643 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGACG+GGG + chr3_3:41617323-41617342 Msa0452620:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - chr3_3:41617355-41617374 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG - chr3_3:41617356-41617375 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - chr3_3:41617357-41617376 None:intergenic 35.0%
! ATCTAACTAGTTTAGAGACC+CGG + chr3_3:41617533-41617552 Msa0452620:intron 35.0%
! AGTCCAAGTGGTAATAGTTT+TGG + chr3_3:41617767-41617786 Msa0452620:intron 35.0%
! GTCCAAGTGGTAATAGTTTT+GGG + chr3_3:41617768-41617787 Msa0452620:intron 35.0%
TGAAAAATGGGTCTAAACGA+TGG + chr3_3:41618140-41618159 Msa0452620:intron 35.0%
! CTGATTTTCTTGGGAAGTTT+CGG + chr3_3:41618234-41618253 Msa0452620:intron 35.0%
! TAGTCAAAAATCGGGTTTTC+TGG - chr3_3:41618278-41618297 None:intergenic 35.0%
CCTGTTCTTAGTCAAAAATC+GGG - chr3_3:41618286-41618305 None:intergenic 35.0%
AACAATGACCCAAAAACAGA+AGG + chr3_3:41618307-41618326 Msa0452620:intron 35.0%
!! ACTCTCATCCTTCTGTTTTT+GGG - chr3_3:41618318-41618337 None:intergenic 35.0%
! AACTCTCATCCTTCTGTTTT+TGG - chr3_3:41618319-41618338 None:intergenic 35.0%
AAAACAGAAGGATGAGAGTT+AGG + chr3_3:41618319-41618338 Msa0452620:intron 35.0%
GAGGTGTATTTAGACTTCTA+GGG - chr3_3:41619704-41619723 None:intergenic 35.0%
! AGAGGTGTATTTAGACTTCT+AGG - chr3_3:41619705-41619724 None:intergenic 35.0%
!! AATGGATTTTGATCCAAGGA+AGG - chr3_3:41620028-41620047 None:intergenic 35.0%
! TGTCTTTTGTCAACTCTGTT+TGG + chr3_3:41620124-41620143 Msa0452620:CDS 35.0%
CCGTCAAAAAAGTGAATGTA+TGG + chr3_3:41620337-41620356 Msa0452620:CDS 35.0%
TGGGCAAAAAAAGAGACAAA+CGG + chr3_3:41620357-41620376 Msa0452620:CDS 35.0%
ATTAGTGATGTTCTTTCACC+TGG + chr3_3:41620384-41620403 Msa0452620:CDS 35.0%
TTAGTGATGTTCTTTCACCT+GGG + chr3_3:41620385-41620404 Msa0452620:CDS 35.0%
GTTAAGCTATTAATAGACCC+AGG - chr3_3:41620405-41620424 None:intergenic 35.0%
! CACTATACTTTAAAGGAGCA+TGG + chr3_3:41620445-41620464 Msa0452620:CDS 35.0%
! CTTCTTTTTGCTAGTCATGA+AGG - chr3_3:41620544-41620563 None:intergenic 35.0%
CTTTCTTATAAGGAAGACGA+AGG - chr3_3:41620599-41620618 None:intergenic 35.0%
CTTCGTCTTCCTTATAAGAA+AGG + chr3_3:41620597-41620616 Msa0452620:CDS 35.0%
TAACAATCCATCTCTTGCAT+CGG - chr3_3:41620661-41620680 None:intergenic 35.0%
!! GTTAGCTTTGATTGAGAAAG+TGG + chr3_3:41620677-41620696 Msa0452620:CDS 35.0%
GTGTTTCAAAATCTCAGGTT+TGG - chr3_3:41620706-41620725 None:intergenic 35.0%
GAAACACAAACTTCCATGTA+AGG + chr3_3:41620719-41620738 Msa0452620:CDS 35.0%
TTCTAATGTGTCAAAGGAGT+TGG + chr3_3:41620800-41620819 Msa0452620:CDS 35.0%
TCTAATGTGTCAAAGGAGTT+GGG + chr3_3:41620801-41620820 Msa0452620:CDS 35.0%
!! GTTGTTTTACCTTTCTCTGA+CGG + chr3_3:41620825-41620844 Msa0452620:CDS 35.0%
TTGATAAGAGACGATTTGTC+TGG + chr3_3:41621032-41621051 Msa0452620:CDS 35.0%
TCTGGTACAATACTCTTTGT+TGG + chr3_3:41614249-41614268 Msa0452620:five_prime_UTR 35.0%
GCTAATGAAGCTAACCAAAC+AGG + chr3_3:41613528-41613547 Msa0452620:five_prime_UTR 40.0%
! AGGGAATTTATGGGCTGAAA+AGG + chr3_3:41613548-41613567 Msa0452620:five_prime_UTR 40.0%
TGGGCTGAAAAGGAAACAAA+AGG + chr3_3:41613558-41613577 Msa0452620:five_prime_UTR 40.0%
GTTAAACTATCAATCGACCC+AGG - chr3_3:41613606-41613625 None:intergenic 40.0%
CCTCTTCATGCTAGTCATAA+AGG - chr3_3:41613745-41613764 None:intergenic 40.0%
CCTTTATGACTAGCATGAAG+AGG + chr3_3:41613742-41613761 Msa0452620:five_prime_UTR 40.0%
!! CAGTGCTTTTGATGGCTTTA+AGG + chr3_3:41613773-41613792 Msa0452620:five_prime_UTR 40.0%
CTTGCTTGTAAGGAAGACTA+AGG - chr3_3:41613800-41613819 None:intergenic 40.0%
! CTTAGTCTTCCTTACAAGCA+AGG + chr3_3:41613798-41613817 Msa0452620:five_prime_UTR 40.0%
TCATCTTCACCTTGCTTGTA+AGG - chr3_3:41613810-41613829 None:intergenic 40.0%
! AACAACCCATCTTTTGCATC+TGG - chr3_3:41613861-41613880 None:intergenic 40.0%
!! GATGCAAAAGATGGGTTGTT+AGG + chr3_3:41613861-41613880 Msa0452620:five_prime_UTR 40.0%
TATGAGGAAGCTTGTCTTCT+AGG - chr3_3:41613920-41613939 None:intergenic 40.0%
CAAGCTTCCTCATACAAAAG+TGG + chr3_3:41613926-41613945 Msa0452620:five_prime_UTR 40.0%
!! CCTACTACCACTTTTGTATG+AGG - chr3_3:41613936-41613955 None:intergenic 40.0%
CCTCATACAAAAGTGGTAGT+AGG + chr3_3:41613933-41613952 Msa0452620:five_prime_UTR 40.0%
TCTGATGTGTTGAAGGAGTT+AGG + chr3_3:41614002-41614021 Msa0452620:five_prime_UTR 40.0%
GTCAAACCTCCAATAGAGAA+AGG - chr3_3:41614038-41614057 None:intergenic 40.0%
TTCTCAACACACTTCAACTC+CGG + chr3_3:41614172-41614191 Msa0452620:five_prime_UTR 40.0%
TGGTCAGCTACAAAGTCTAT+CGG - chr3_3:41614200-41614219 None:intergenic 40.0%
AGTTAAGATCATCCAGCAAG+AGG - chr3_3:41614288-41614307 None:intergenic 40.0%
!! TTCATGTTTTGAACGGTTGC+TGG + chr3_3:41614377-41614396 Msa0452620:CDS 40.0%
GTCCATGACGCTGAAATATT+AGG + chr3_3:41614476-41614495 Msa0452620:intron 40.0%
TCCCTAATATTTCAGCGTCA+TGG - chr3_3:41614481-41614500 None:intergenic 40.0%
!!! TTTTGGGGTTGTAGACAAAG+AGG + chr3_3:41614619-41614638 Msa0452620:intron 40.0%
! TTTGGGGTTGTAGACAAAGA+GGG + chr3_3:41614620-41614639 Msa0452620:intron 40.0%
ATGCAGGGGGAAAGTTTATA+AGG - chr3_3:41614894-41614913 None:intergenic 40.0%
!! AAAAATGGTAGTGGATGCAG+GGG - chr3_3:41614908-41614927 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + chr3_3:41615038-41615057 Msa0452620:intron 40.0%
ACAACTAAGGGTCACAACTT+TGG + chr3_3:41615308-41615327 Msa0452620:intron 40.0%
CAACTAAGGGTCACAACTTT+GGG + chr3_3:41615309-41615328 Msa0452620:intron 40.0%
TAAAACCTTGTACGTCGACA+AGG + chr3_3:41615672-41615691 Msa0452620:intron 40.0%
TCACTCATGAAAGTTACGTC+TGG - chr3_3:41615702-41615721 None:intergenic 40.0%
! AAGAGACTTCACCTTTGGAA+TGG + chr3_3:41615945-41615964 Msa0452620:intron 40.0%
TCACTCTACATCCATTCCAA+AGG - chr3_3:41615959-41615978 None:intergenic 40.0%
AGCATCTTGAAGGATTTGGA+TGG - chr3_3:41616264-41616283 None:intergenic 40.0%
!! AAGGTTTTGTGTTTCCTGTG+TGG - chr3_3:41616495-41616514 None:intergenic 40.0%
TACTTAGAAAAGGATGCAGC+GGG - chr3_3:41616623-41616642 None:intergenic 40.0%
! GCTGCATCCTTTTCTAAGTA+AGG + chr3_3:41616623-41616642 Msa0452620:intron 40.0%
! GCATCCTTTTCTAAGTAAGG+TGG + chr3_3:41616626-41616645 Msa0452620:intron 40.0%
CTAGCCACCTTACTTAGAAA+AGG - chr3_3:41616633-41616652 None:intergenic 40.0%
!! TTTGGAGCACAAAAGCATCT+TGG + chr3_3:41616839-41616858 Msa0452620:intron 40.0%
! TCAGTTTAGCTCAGTTGGTA+TGG - chr3_3:41617384-41617403 None:intergenic 40.0%
GACCCAAAACTATTACCACT+TGG - chr3_3:41617773-41617792 None:intergenic 40.0%
!! GTTTTGGGTCCCTTTAAACA+TGG + chr3_3:41617783-41617802 Msa0452620:intron 40.0%
! TTTGGAAATTTTACAGGGCG+CGG - chr3_3:41617839-41617858 None:intergenic 40.0%
GTTGAAATGTGAGAGTCTGA+TGG - chr3_3:41617951-41617970 None:intergenic 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG + chr3_3:41618283-41618302 Msa0452620:intron 40.0%
ATGAATGTGGAAGTGACATG+TGG + chr3_3:41619370-41619389 Msa0452620:intron 40.0%
TTGTTACATCTTAAGGACCC+AGG - chr3_3:41619565-41619584 None:intergenic 40.0%
ATCGTTCAATTGTGAGAGAG+AGG - chr3_3:41619723-41619742 None:intergenic 40.0%
!! ATTGTGAAAGTAGAGTGCTG+CGG - chr3_3:41619803-41619822 None:intergenic 40.0%
GTGGTAACTCATTCTTCTTC+TGG - chr3_3:41619836-41619855 None:intergenic 40.0%
! AGCACAGTTTGGAATGACAA+CGG - chr3_3:41619955-41619974 None:intergenic 40.0%
!! GGTCAATGGATTTTGATCCA+AGG - chr3_3:41620032-41620051 None:intergenic 40.0%
TAAGGAGTTGAGATGGTCAA+TGG - chr3_3:41620046-41620065 None:intergenic 40.0%
GAGTTGACAAAAGACAACTG+TGG - chr3_3:41620120-41620139 None:intergenic 40.0%
GAAGGAAGGGTAAACAGAAA+GGG - chr3_3:41620160-41620179 None:intergenic 40.0%
TGAAGGAAGGGTAAACAGAA+AGG - chr3_3:41620161-41620180 None:intergenic 40.0%
GAAATCAAGTGATCTGAGAG+TGG - chr3_3:41620211-41620230 None:intergenic 40.0%
AACAATCCATCTCTTGCATC+GGG - chr3_3:41620660-41620679 None:intergenic 40.0%
TCCATGTAAGGAAGTGATAG+TGG + chr3_3:41620731-41620750 Msa0452620:CDS 40.0%
CCATGTAAGGAAGTGATAGT+GGG + chr3_3:41620732-41620751 Msa0452620:CDS 40.0%
TGACGGAGGTTTGACAAAAA+TGG + chr3_3:41620842-41620861 Msa0452620:CDS 40.0%
GTCAGCTACAAAGTCTATTG+GGG - chr3_3:41620997-41621016 None:intergenic 40.0%
GGTCAGCTACAAAGTCTATT+GGG - chr3_3:41620998-41621017 None:intergenic 40.0%
TGGTCAGCTACAAAGTCTAT+TGG - chr3_3:41614200-41614219 None:intergenic 40.0%
GCTAATGAAGCTAACCAAAC+AGG + chr3_3:41613528-41613547 Msa0452620:five_prime_UTR 40.0%
! AGGGAATTTATGGGCTGAAA+AGG + chr3_3:41613548-41613567 Msa0452620:five_prime_UTR 40.0%
TGGGCTGAAAAGGAAACAAA+AGG + chr3_3:41613558-41613577 Msa0452620:five_prime_UTR 40.0%
GTTAAACTATCAATCGACCC+AGG - chr3_3:41613606-41613625 None:intergenic 40.0%
CCTCTTCATGCTAGTCATAA+AGG - chr3_3:41613745-41613764 None:intergenic 40.0%
CCTTTATGACTAGCATGAAG+AGG + chr3_3:41613742-41613761 Msa0452620:five_prime_UTR 40.0%
!! CAGTGCTTTTGATGGCTTTA+AGG + chr3_3:41613773-41613792 Msa0452620:five_prime_UTR 40.0%
CTTGCTTGTAAGGAAGACTA+AGG - chr3_3:41613800-41613819 None:intergenic 40.0%
! CTTAGTCTTCCTTACAAGCA+AGG + chr3_3:41613798-41613817 Msa0452620:five_prime_UTR 40.0%
TCATCTTCACCTTGCTTGTA+AGG - chr3_3:41613810-41613829 None:intergenic 40.0%
! AACAACCCATCTTTTGCATC+TGG - chr3_3:41613861-41613880 None:intergenic 40.0%
!! GATGCAAAAGATGGGTTGTT+AGG + chr3_3:41613861-41613880 Msa0452620:five_prime_UTR 40.0%
TATGAGGAAGCTTGTCTTCT+AGG - chr3_3:41613920-41613939 None:intergenic 40.0%
CAAGCTTCCTCATACAAAAG+TGG + chr3_3:41613926-41613945 Msa0452620:five_prime_UTR 40.0%
!! CCTACTACCACTTTTGTATG+AGG - chr3_3:41613936-41613955 None:intergenic 40.0%
CCTCATACAAAAGTGGTAGT+AGG + chr3_3:41613933-41613952 Msa0452620:five_prime_UTR 40.0%
TCTGATGTGTTGAAGGAGTT+AGG + chr3_3:41614002-41614021 Msa0452620:five_prime_UTR 40.0%
GTCAAACCTCCAATAGAGAA+AGG - chr3_3:41614038-41614057 None:intergenic 40.0%
TTCTCAACACACTTCAACTC+CGG + chr3_3:41614172-41614191 Msa0452620:five_prime_UTR 40.0%
TGGTCAGCTACAAAGTCTAT+CGG - chr3_3:41614200-41614219 None:intergenic 40.0%
AGTTAAGATCATCCAGCAAG+AGG - chr3_3:41614288-41614307 None:intergenic 40.0%
!! TTCATGTTTTGAACGGTTGC+TGG + chr3_3:41614377-41614396 Msa0452620:CDS 40.0%
GTCCATGACGCTGAAATATT+AGG + chr3_3:41614476-41614495 Msa0452620:intron 40.0%
TCCCTAATATTTCAGCGTCA+TGG - chr3_3:41614481-41614500 None:intergenic 40.0%
!!! TTTTGGGGTTGTAGACAAAG+AGG + chr3_3:41614619-41614638 Msa0452620:intron 40.0%
! TTTGGGGTTGTAGACAAAGA+GGG + chr3_3:41614620-41614639 Msa0452620:intron 40.0%
ATGCAGGGGGAAAGTTTATA+AGG - chr3_3:41614894-41614913 None:intergenic 40.0%
!! AAAAATGGTAGTGGATGCAG+GGG - chr3_3:41614908-41614927 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + chr3_3:41615038-41615057 Msa0452620:intron 40.0%
ACAACTAAGGGTCACAACTT+TGG + chr3_3:41615308-41615327 Msa0452620:intron 40.0%
CAACTAAGGGTCACAACTTT+GGG + chr3_3:41615309-41615328 Msa0452620:intron 40.0%
TAAAACCTTGTACGTCGACA+AGG + chr3_3:41615672-41615691 Msa0452620:intron 40.0%
TCACTCATGAAAGTTACGTC+TGG - chr3_3:41615702-41615721 None:intergenic 40.0%
! AAGAGACTTCACCTTTGGAA+TGG + chr3_3:41615945-41615964 Msa0452620:intron 40.0%
TCACTCTACATCCATTCCAA+AGG - chr3_3:41615959-41615978 None:intergenic 40.0%
AGCATCTTGAAGGATTTGGA+TGG - chr3_3:41616264-41616283 None:intergenic 40.0%
!! AAGGTTTTGTGTTTCCTGTG+TGG - chr3_3:41616495-41616514 None:intergenic 40.0%
TACTTAGAAAAGGATGCAGC+GGG - chr3_3:41616623-41616642 None:intergenic 40.0%
! GCTGCATCCTTTTCTAAGTA+AGG + chr3_3:41616623-41616642 Msa0452620:intron 40.0%
! GCATCCTTTTCTAAGTAAGG+TGG + chr3_3:41616626-41616645 Msa0452620:intron 40.0%
CTAGCCACCTTACTTAGAAA+AGG - chr3_3:41616633-41616652 None:intergenic 40.0%
!! TTTGGAGCACAAAAGCATCT+TGG + chr3_3:41616839-41616858 Msa0452620:intron 40.0%
! TCAGTTTAGCTCAGTTGGTA+TGG - chr3_3:41617384-41617403 None:intergenic 40.0%
GACCCAAAACTATTACCACT+TGG - chr3_3:41617773-41617792 None:intergenic 40.0%
!! GTTTTGGGTCCCTTTAAACA+TGG + chr3_3:41617783-41617802 Msa0452620:intron 40.0%
! TTTGGAAATTTTACAGGGCG+CGG - chr3_3:41617839-41617858 None:intergenic 40.0%
GTTGAAATGTGAGAGTCTGA+TGG - chr3_3:41617951-41617970 None:intergenic 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG + chr3_3:41618283-41618302 Msa0452620:intron 40.0%
ATGAATGTGGAAGTGACATG+TGG + chr3_3:41619370-41619389 Msa0452620:intron 40.0%
TTGTTACATCTTAAGGACCC+AGG - chr3_3:41619565-41619584 None:intergenic 40.0%
ATCGTTCAATTGTGAGAGAG+AGG - chr3_3:41619723-41619742 None:intergenic 40.0%
!! ATTGTGAAAGTAGAGTGCTG+CGG - chr3_3:41619803-41619822 None:intergenic 40.0%
GTGGTAACTCATTCTTCTTC+TGG - chr3_3:41619836-41619855 None:intergenic 40.0%
! AGCACAGTTTGGAATGACAA+CGG - chr3_3:41619955-41619974 None:intergenic 40.0%
!! GGTCAATGGATTTTGATCCA+AGG - chr3_3:41620032-41620051 None:intergenic 40.0%
TAAGGAGTTGAGATGGTCAA+TGG - chr3_3:41620046-41620065 None:intergenic 40.0%
GAGTTGACAAAAGACAACTG+TGG - chr3_3:41620120-41620139 None:intergenic 40.0%
GAAGGAAGGGTAAACAGAAA+GGG - chr3_3:41620160-41620179 None:intergenic 40.0%
TGAAGGAAGGGTAAACAGAA+AGG - chr3_3:41620161-41620180 None:intergenic 40.0%
GAAATCAAGTGATCTGAGAG+TGG - chr3_3:41620211-41620230 None:intergenic 40.0%
AACAATCCATCTCTTGCATC+GGG - chr3_3:41620660-41620679 None:intergenic 40.0%
TCCATGTAAGGAAGTGATAG+TGG + chr3_3:41620731-41620750 Msa0452620:CDS 40.0%
CCATGTAAGGAAGTGATAGT+GGG + chr3_3:41620732-41620751 Msa0452620:CDS 40.0%
TGACGGAGGTTTGACAAAAA+TGG + chr3_3:41620842-41620861 Msa0452620:CDS 40.0%
GTCAGCTACAAAGTCTATTG+GGG - chr3_3:41620997-41621016 None:intergenic 40.0%
GGTCAGCTACAAAGTCTATT+GGG - chr3_3:41620998-41621017 None:intergenic 40.0%
TGGTCAGCTACAAAGTCTAT+TGG - chr3_3:41614200-41614219 None:intergenic 40.0%
CAGCCCATAAATTCCCTGTT+TGG - chr3_3:41613545-41613564 None:intergenic 45.0%
AAACTATCAATCGACCCAGG+TGG - chr3_3:41613603-41613622 None:intergenic 45.0%
GGAGCAATCGTTTGATGCTT+CGG + chr3_3:41613668-41613687 Msa0452620:five_prime_UTR 45.0%
CATAAAGGGAACCTTGACTG+AGG - chr3_3:41613730-41613749 None:intergenic 45.0%
TGTGTTGAAGGAGTTAGGAG+TGG + chr3_3:41614007-41614026 Msa0452620:five_prime_UTR 45.0%
GCTACAAAGTCTATCGGTAC+CGG - chr3_3:41614194-41614213 None:intergenic 45.0%
! AGGGCGTGTTGATATAGCTT+TGG + chr3_3:41614639-41614658 Msa0452620:intron 45.0%
!! AAAATGGTAGTGGATGCAGG+GGG - chr3_3:41614907-41614926 None:intergenic 45.0%
CCGTCTTAACTTATGCCCAA+GGG - chr3_3:41615057-41615076 None:intergenic 45.0%
CCCTTGGGCATAAGTTAAGA+CGG + chr3_3:41615054-41615073 Msa0452620:intron 45.0%
TGCAGAATTTCGTTGCAGCA+AGG + chr3_3:41615222-41615241 Msa0452620:intron 45.0%
!! CACAACTTTGGGATTCGTGT+AGG + chr3_3:41615320-41615339 Msa0452620:intron 45.0%
! GTTTTCCTTGTCGACGTACA+AGG - chr3_3:41615680-41615699 None:intergenic 45.0%
TTCATGAGTGAGCCACTGTT+AGG + chr3_3:41615711-41615730 Msa0452620:intron 45.0%
GAAGGAAGAGACTTCACCTT+TGG + chr3_3:41615940-41615959 Msa0452620:intron 45.0%
ATTGAGACAAGGTTCCACAC+AGG + chr3_3:41616478-41616497 Msa0452620:intron 45.0%
! CATCGTCAGTTTAGCTCAGT+TGG - chr3_3:41617389-41617408 None:intergenic 45.0%
! TTGGAAATTTTACAGGGCGC+GGG - chr3_3:41617838-41617857 None:intergenic 45.0%
!!! GGAATGCACAAGGGCATTTT+TGG - chr3_3:41617857-41617876 None:intergenic 45.0%
!!! GGGTTTTCTGGCTACTAGAT+CGG - chr3_3:41618266-41618285 None:intergenic 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
TATTGGGCCAAATACCTTCC+TGG + chr3_3:41619544-41619563 Msa0452620:intron 45.0%
ATTGGGCCAAATACCTTCCT+GGG + chr3_3:41619545-41619564 Msa0452620:intron 45.0%
!! TAAGGACCCAGGAAGGTATT+TGG - chr3_3:41619554-41619573 None:intergenic 45.0%
TACATCTTAAGGACCCAGGA+AGG - chr3_3:41619561-41619580 None:intergenic 45.0%
!! AATTAGCGATTGATTCGCGG+TGG - chr3_3:41619855-41619874 None:intergenic 45.0%
CTACTATGCTGAGCACAGTT+TGG - chr3_3:41619966-41619985 None:intergenic 45.0%
GAGAGGATAAGGAGTTGAGA+TGG - chr3_3:41620053-41620072 None:intergenic 45.0%
GGAAAAGAGGTGAGAGGATA+AGG - chr3_3:41620064-41620083 None:intergenic 45.0%
! GACCGTGATTTTCACCTTCT+CGG + chr3_3:41620498-41620517 Msa0452620:CDS 45.0%
CACCGAGAAGGTGAAAATCA+CGG - chr3_3:41620503-41620522 None:intergenic 45.0%
TTTCTTCCCGATGCAAGAGA+TGG + chr3_3:41620651-41620670 Msa0452620:CDS 45.0%
CCCACTATCACTTCCTTACA+TGG - chr3_3:41620735-41620754 None:intergenic 45.0%
!! AAGTGATAGTGGGTGACTTC+AGG + chr3_3:41620742-41620761 Msa0452620:CDS 45.0%
! GTTTTACCTTTCTCTGACGG+AGG + chr3_3:41620828-41620847 Msa0452620:CDS 45.0%
AAATGGCGAACTCTCCGATT+TGG + chr3_3:41620859-41620878 Msa0452620:CDS 45.0%
AATGGCGAACTCTCCGATTT+GGG + chr3_3:41620860-41620879 Msa0452620:CDS 45.0%
AGTCACTAGAACCGGACTAT+CGG + chr3_3:41620944-41620963 Msa0452620:CDS 45.0%
ATTGGGGTCGGAATTGAAGT+AGG - chr3_3:41620981-41621000 None:intergenic 45.0%
GCTACAAAGTCTATTGGGGT+CGG - chr3_3:41620993-41621012 None:intergenic 45.0%
CAACAAGAGGATTGAGCACT+TGG - chr3_3:41621076-41621095 None:intergenic 45.0%
CAAGTGCTCAATCCTCTTGT+TGG + chr3_3:41621074-41621093 Msa0452620:CDS 45.0%
CAGCCCATAAATTCCCTGTT+TGG - chr3_3:41613545-41613564 None:intergenic 45.0%
AAACTATCAATCGACCCAGG+TGG - chr3_3:41613603-41613622 None:intergenic 45.0%
GGAGCAATCGTTTGATGCTT+CGG + chr3_3:41613668-41613687 Msa0452620:five_prime_UTR 45.0%
CATAAAGGGAACCTTGACTG+AGG - chr3_3:41613730-41613749 None:intergenic 45.0%
TGTGTTGAAGGAGTTAGGAG+TGG + chr3_3:41614007-41614026 Msa0452620:five_prime_UTR 45.0%
GCTACAAAGTCTATCGGTAC+CGG - chr3_3:41614194-41614213 None:intergenic 45.0%
! AGGGCGTGTTGATATAGCTT+TGG + chr3_3:41614639-41614658 Msa0452620:intron 45.0%
!! AAAATGGTAGTGGATGCAGG+GGG - chr3_3:41614907-41614926 None:intergenic 45.0%
CCGTCTTAACTTATGCCCAA+GGG - chr3_3:41615057-41615076 None:intergenic 45.0%
CCCTTGGGCATAAGTTAAGA+CGG + chr3_3:41615054-41615073 Msa0452620:intron 45.0%
TGCAGAATTTCGTTGCAGCA+AGG + chr3_3:41615222-41615241 Msa0452620:intron 45.0%
!! CACAACTTTGGGATTCGTGT+AGG + chr3_3:41615320-41615339 Msa0452620:intron 45.0%
! GTTTTCCTTGTCGACGTACA+AGG - chr3_3:41615680-41615699 None:intergenic 45.0%
TTCATGAGTGAGCCACTGTT+AGG + chr3_3:41615711-41615730 Msa0452620:intron 45.0%
GAAGGAAGAGACTTCACCTT+TGG + chr3_3:41615940-41615959 Msa0452620:intron 45.0%
ATTGAGACAAGGTTCCACAC+AGG + chr3_3:41616478-41616497 Msa0452620:intron 45.0%
! CATCGTCAGTTTAGCTCAGT+TGG - chr3_3:41617389-41617408 None:intergenic 45.0%
! TTGGAAATTTTACAGGGCGC+GGG - chr3_3:41617838-41617857 None:intergenic 45.0%
!!! GGAATGCACAAGGGCATTTT+TGG - chr3_3:41617857-41617876 None:intergenic 45.0%
!!! GGGTTTTCTGGCTACTAGAT+CGG - chr3_3:41618266-41618285 None:intergenic 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
ATGAATGTGGAAGTGACACG+TGG + chr3_3:41618430-41618449 Msa0452620:intron 45.0%
TATTGGGCCAAATACCTTCC+TGG + chr3_3:41619544-41619563 Msa0452620:intron 45.0%
ATTGGGCCAAATACCTTCCT+GGG + chr3_3:41619545-41619564 Msa0452620:intron 45.0%
!! TAAGGACCCAGGAAGGTATT+TGG - chr3_3:41619554-41619573 None:intergenic 45.0%
TACATCTTAAGGACCCAGGA+AGG - chr3_3:41619561-41619580 None:intergenic 45.0%
!! AATTAGCGATTGATTCGCGG+TGG - chr3_3:41619855-41619874 None:intergenic 45.0%
CTACTATGCTGAGCACAGTT+TGG - chr3_3:41619966-41619985 None:intergenic 45.0%
GAGAGGATAAGGAGTTGAGA+TGG - chr3_3:41620053-41620072 None:intergenic 45.0%
GGAAAAGAGGTGAGAGGATA+AGG - chr3_3:41620064-41620083 None:intergenic 45.0%
! GACCGTGATTTTCACCTTCT+CGG + chr3_3:41620498-41620517 Msa0452620:CDS 45.0%
CACCGAGAAGGTGAAAATCA+CGG - chr3_3:41620503-41620522 None:intergenic 45.0%
TTTCTTCCCGATGCAAGAGA+TGG + chr3_3:41620651-41620670 Msa0452620:CDS 45.0%
CCCACTATCACTTCCTTACA+TGG - chr3_3:41620735-41620754 None:intergenic 45.0%
!! AAGTGATAGTGGGTGACTTC+AGG + chr3_3:41620742-41620761 Msa0452620:CDS 45.0%
! GTTTTACCTTTCTCTGACGG+AGG + chr3_3:41620828-41620847 Msa0452620:CDS 45.0%
AAATGGCGAACTCTCCGATT+TGG + chr3_3:41620859-41620878 Msa0452620:CDS 45.0%
AATGGCGAACTCTCCGATTT+GGG + chr3_3:41620860-41620879 Msa0452620:CDS 45.0%
AGTCACTAGAACCGGACTAT+CGG + chr3_3:41620944-41620963 Msa0452620:CDS 45.0%
ATTGGGGTCGGAATTGAAGT+AGG - chr3_3:41620981-41621000 None:intergenic 45.0%
GCTACAAAGTCTATTGGGGT+CGG - chr3_3:41620993-41621012 None:intergenic 45.0%
CAACAAGAGGATTGAGCACT+TGG - chr3_3:41621076-41621095 None:intergenic 45.0%
CAAGTGCTCAATCCTCTTGT+TGG + chr3_3:41621074-41621093 Msa0452620:CDS 45.0%
!! AATATTATAAACAAAAAAAA+TGG - chr3_3:41614923-41614942 None:intergenic 5.0%
!! TTTCATATATAAAATAAAAA+AGG + chr3_3:41615015-41615034 Msa0452620:intron 5.0%
!! TTCATATATAAAATAAAAAA+GGG + chr3_3:41615016-41615035 Msa0452620:intron 5.0%
!!! TATTTGATTTTAAAAATTTT+TGG - chr3_3:41618066-41618085 None:intergenic 5.0%
!! AAATTAATAAAAATGAAAAA+TGG + chr3_3:41618127-41618146 Msa0452620:intron 5.0%
!! AATTAATAAAAATGAAAAAT+GGG + chr3_3:41618128-41618147 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!!! TTTTTTTTTTGAAAAAAAAT+TGG + chr3_3:41619455-41619474 Msa0452620:intron 5.0%
!!! TTTTTTTTTGAAAAAAAATT+GGG + chr3_3:41619456-41619475 Msa0452620:intron 5.0%
!! AATATTATAAACAAAAAAAA+TGG - chr3_3:41614923-41614942 None:intergenic 5.0%
!! TTTCATATATAAAATAAAAA+AGG + chr3_3:41615015-41615034 Msa0452620:intron 5.0%
!! TTCATATATAAAATAAAAAA+GGG + chr3_3:41615016-41615035 Msa0452620:intron 5.0%
!!! TATTTGATTTTAAAAATTTT+TGG - chr3_3:41618066-41618085 None:intergenic 5.0%
!! AAATTAATAAAAATGAAAAA+TGG + chr3_3:41618127-41618146 Msa0452620:intron 5.0%
!! AATTAATAAAAATGAAAAAT+GGG + chr3_3:41618128-41618147 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!! ATTTATGTTAAATAAAATAT+TGG + chr3_3:41618557-41618576 Msa0452620:intron 5.0%
!!! TTTTTTTTTTGAAAAAAAAT+TGG + chr3_3:41619455-41619474 Msa0452620:intron 5.0%
!!! TTTTTTTTTGAAAAAAAATT+GGG + chr3_3:41619456-41619475 Msa0452620:intron 5.0%
!! TGACTGAGGTGCCATTGAGA+AGG - chr3_3:41613716-41613735 None:intergenic 50.0%
TCTCAATGGCACCTCAGTCA+AGG + chr3_3:41613716-41613735 Msa0452620:five_prime_UTR 50.0%
CAACACACTTGCAGTGACTG+CGG - chr3_3:41614144-41614163 None:intergenic 50.0%
! GTCACTGCAAGTGTGTTGCT+TGG + chr3_3:41614146-41614165 Msa0452620:five_prime_UTR 50.0%
CAAGTGCACAATCCTCTTGC+TGG + chr3_3:41614273-41614292 Msa0452620:five_prime_UTR 50.0%
GCCGTCTTAACTTATGCCCA+AGG - chr3_3:41615058-41615077 None:intergenic 50.0%
AGTGAGCCACTGTTAGGTTC+TGG + chr3_3:41615717-41615736 Msa0452620:intron 50.0%
TCCCGTAAGAAGTCCCTTCT+AGG + chr3_3:41618187-41618206 Msa0452620:intron 50.0%
CCCTAGAAGGGACTTCTTAC+GGG - chr3_3:41618191-41618210 None:intergenic 50.0%
CCCGTAAGAAGTCCCTTCTA+GGG + chr3_3:41618188-41618207 Msa0452620:intron 50.0%
CCCCTAGAAGGGACTTCTTA+CGG - chr3_3:41618192-41618211 None:intergenic 50.0%
CCGTAAGAAGTCCCTTCTAG+GGG + chr3_3:41618189-41618208 Msa0452620:intron 50.0%
GCTTCTTCTTGACAGCACAG+AGG + chr3_3:41619770-41619789 Msa0452620:intron 50.0%
!! ATAGTAGCTGCTGGTTCCGA+GGG + chr3_3:41619979-41619998 Msa0452620:intron 50.0%
GAGAGAAGCTGACGTTGTGT+TGG - chr3_3:41620006-41620025 None:intergenic 50.0%
CACAGAGGAAAAGAGGTGAG+AGG - chr3_3:41620070-41620089 None:intergenic 50.0%
CGTCTAGCACAGAGGAAAAG+AGG - chr3_3:41620077-41620096 None:intergenic 50.0%
GACAACTGTGGACCACCATA+GGG - chr3_3:41620108-41620127 None:intergenic 50.0%
AGACAACTGTGGACCACCAT+AGG - chr3_3:41620109-41620128 None:intergenic 50.0%
! CGTGATTTTCACCTTCTCGG+TGG + chr3_3:41620501-41620520 Msa0452620:CDS 50.0%
GTCAAACCTCCGTCAGAGAA+AGG - chr3_3:41620837-41620856 None:intergenic 50.0%
GCTGCTGTAGTCACTAGAAC+CGG + chr3_3:41620936-41620955 Msa0452620:CDS 50.0%
GTCACTAGAACCGGACTATC+GGG + chr3_3:41620945-41620964 Msa0452620:CDS 50.0%
!! TGACTGAGGTGCCATTGAGA+AGG - chr3_3:41613716-41613735 None:intergenic 50.0%
TCTCAATGGCACCTCAGTCA+AGG + chr3_3:41613716-41613735 Msa0452620:five_prime_UTR 50.0%
CAACACACTTGCAGTGACTG+CGG - chr3_3:41614144-41614163 None:intergenic 50.0%
! GTCACTGCAAGTGTGTTGCT+TGG + chr3_3:41614146-41614165 Msa0452620:five_prime_UTR 50.0%
CAAGTGCACAATCCTCTTGC+TGG + chr3_3:41614273-41614292 Msa0452620:five_prime_UTR 50.0%
GCCGTCTTAACTTATGCCCA+AGG - chr3_3:41615058-41615077 None:intergenic 50.0%
AGTGAGCCACTGTTAGGTTC+TGG + chr3_3:41615717-41615736 Msa0452620:intron 50.0%
TCCCGTAAGAAGTCCCTTCT+AGG + chr3_3:41618187-41618206 Msa0452620:intron 50.0%
CCCTAGAAGGGACTTCTTAC+GGG - chr3_3:41618191-41618210 None:intergenic 50.0%
CCCGTAAGAAGTCCCTTCTA+GGG + chr3_3:41618188-41618207 Msa0452620:intron 50.0%
CCCCTAGAAGGGACTTCTTA+CGG - chr3_3:41618192-41618211 None:intergenic 50.0%
CCGTAAGAAGTCCCTTCTAG+GGG + chr3_3:41618189-41618208 Msa0452620:intron 50.0%
GCTTCTTCTTGACAGCACAG+AGG + chr3_3:41619770-41619789 Msa0452620:intron 50.0%
!! ATAGTAGCTGCTGGTTCCGA+GGG + chr3_3:41619979-41619998 Msa0452620:intron 50.0%
GAGAGAAGCTGACGTTGTGT+TGG - chr3_3:41620006-41620025 None:intergenic 50.0%
CACAGAGGAAAAGAGGTGAG+AGG - chr3_3:41620070-41620089 None:intergenic 50.0%
CGTCTAGCACAGAGGAAAAG+AGG - chr3_3:41620077-41620096 None:intergenic 50.0%
GACAACTGTGGACCACCATA+GGG - chr3_3:41620108-41620127 None:intergenic 50.0%
AGACAACTGTGGACCACCAT+AGG - chr3_3:41620109-41620128 None:intergenic 50.0%
! CGTGATTTTCACCTTCTCGG+TGG + chr3_3:41620501-41620520 Msa0452620:CDS 50.0%
GTCAAACCTCCGTCAGAGAA+AGG - chr3_3:41620837-41620856 None:intergenic 50.0%
GCTGCTGTAGTCACTAGAAC+CGG + chr3_3:41620936-41620955 Msa0452620:CDS 50.0%
GTCACTAGAACCGGACTATC+GGG + chr3_3:41620945-41620964 Msa0452620:CDS 50.0%
GGAGAGCCAGAACCTAACAG+TGG - chr3_3:41615726-41615745 None:intergenic 55.0%
ATATCTAACCCGGGCAACGC+CGG - chr3_3:41617555-41617574 None:intergenic 55.0%
! ATTTTACAGGGCGCGGGAGA+AGG - chr3_3:41617832-41617851 None:intergenic 55.0%
! AGTCCCTTCTAGGGGAGTCA+TGG + chr3_3:41618197-41618216 Msa0452620:intron 55.0%
GGACCATGACTCCCCTAGAA+GGG - chr3_3:41618203-41618222 None:intergenic 55.0%
AGGACCATGACTCCCCTAGA+AGG - chr3_3:41618204-41618223 None:intergenic 55.0%
GTGCTCAGCATAGTAGCTGC+TGG + chr3_3:41619970-41619989 Msa0452620:intron 55.0%
!! CATAGTAGCTGCTGGTTCCG+AGG + chr3_3:41619978-41619997 Msa0452620:intron 55.0%
CTGACGTTGTGTTGGACCCT+CGG - chr3_3:41619998-41620017 None:intergenic 55.0%
CGTCAGCTTCTCTCCTTCCT+TGG + chr3_3:41620012-41620031 Msa0452620:CDS 55.0%
TGATTGAGCTGCCACCGAGA+AGG - chr3_3:41620515-41620534 None:intergenic 55.0%
TCTCGGTGGCAGCTCAATCA+AGG + chr3_3:41620515-41620534 Msa0452620:CDS 55.0%
ACGAGCACATCCCGATAGTC+CGG - chr3_3:41620958-41620977 None:intergenic 55.0%
GGAGAGCCAGAACCTAACAG+TGG - chr3_3:41615726-41615745 None:intergenic 55.0%
ATATCTAACCCGGGCAACGC+CGG - chr3_3:41617555-41617574 None:intergenic 55.0%
! ATTTTACAGGGCGCGGGAGA+AGG - chr3_3:41617832-41617851 None:intergenic 55.0%
! AGTCCCTTCTAGGGGAGTCA+TGG + chr3_3:41618197-41618216 Msa0452620:intron 55.0%
GGACCATGACTCCCCTAGAA+GGG - chr3_3:41618203-41618222 None:intergenic 55.0%
AGGACCATGACTCCCCTAGA+AGG - chr3_3:41618204-41618223 None:intergenic 55.0%
GTGCTCAGCATAGTAGCTGC+TGG + chr3_3:41619970-41619989 Msa0452620:intron 55.0%
!! CATAGTAGCTGCTGGTTCCG+AGG + chr3_3:41619978-41619997 Msa0452620:intron 55.0%
CTGACGTTGTGTTGGACCCT+CGG - chr3_3:41619998-41620017 None:intergenic 55.0%
CGTCAGCTTCTCTCCTTCCT+TGG + chr3_3:41620012-41620031 Msa0452620:CDS 55.0%
TGATTGAGCTGCCACCGAGA+AGG - chr3_3:41620515-41620534 None:intergenic 55.0%
TCTCGGTGGCAGCTCAATCA+AGG + chr3_3:41620515-41620534 Msa0452620:CDS 55.0%
ACGAGCACATCCCGATAGTC+CGG - chr3_3:41620958-41620977 None:intergenic 55.0%
GGCTCTCCTTGCCACTGCTT+CGG + chr3_3:41615738-41615757 Msa0452620:intron 60.0%
TCTCCTTGCCACTGCTTCGG+CGG + chr3_3:41615741-41615760 Msa0452620:intron 60.0%
! AGGTTGATCCGCCGAAGCAG+TGG - chr3_3:41615752-41615771 None:intergenic 60.0%
TTTAGAGACCCGGCGTTGCC+CGG + chr3_3:41617543-41617562 Msa0452620:intron 60.0%
TATCTAACCCGGGCAACGCC+GGG - chr3_3:41617554-41617573 None:intergenic 60.0%
GCGGGAGAAGGCAATAGGGT+GGG - chr3_3:41617820-41617839 None:intergenic 60.0%
AGCAGCGTCGTCTAGCACAG+AGG - chr3_3:41620085-41620104 None:intergenic 60.0%
CTAGACGACGCTGCTCCCTA+TGG + chr3_3:41620090-41620109 Msa0452620:CDS 60.0%
GGCTCTCCTTGCCACTGCTT+CGG + chr3_3:41615738-41615757 Msa0452620:intron 60.0%
TCTCCTTGCCACTGCTTCGG+CGG + chr3_3:41615741-41615760 Msa0452620:intron 60.0%
! AGGTTGATCCGCCGAAGCAG+TGG - chr3_3:41615752-41615771 None:intergenic 60.0%
TTTAGAGACCCGGCGTTGCC+CGG + chr3_3:41617543-41617562 Msa0452620:intron 60.0%
TATCTAACCCGGGCAACGCC+GGG - chr3_3:41617554-41617573 None:intergenic 60.0%
GCGGGAGAAGGCAATAGGGT+GGG - chr3_3:41617820-41617839 None:intergenic 60.0%
AGCAGCGTCGTCTAGCACAG+AGG - chr3_3:41620085-41620104 None:intergenic 60.0%
CTAGACGACGCTGCTCCCTA+TGG + chr3_3:41620090-41620109 Msa0452620:CDS 60.0%
GATCCGCCGAAGCAGTGGCA+AGG - chr3_3:41615747-41615766 None:intergenic 65.0%
TTAGAGACCCGGCGTTGCCC+GGG + chr3_3:41617544-41617563 Msa0452620:intron 65.0%
CGCGGGAGAAGGCAATAGGG+TGG - chr3_3:41617821-41617840 None:intergenic 65.0%
GGGCGCGGGAGAAGGCAATA+GGG - chr3_3:41617824-41617843 None:intergenic 65.0%
AGGGCGCGGGAGAAGGCAAT+AGG - chr3_3:41617825-41617844 None:intergenic 65.0%
GACGACGCTGCTCCCTATGG+TGG + chr3_3:41620093-41620112 Msa0452620:CDS 65.0%
GATCCGCCGAAGCAGTGGCA+AGG - chr3_3:41615747-41615766 None:intergenic 65.0%
TTAGAGACCCGGCGTTGCCC+GGG + chr3_3:41617544-41617563 Msa0452620:intron 65.0%
CGCGGGAGAAGGCAATAGGG+TGG - chr3_3:41617821-41617840 None:intergenic 65.0%
GGGCGCGGGAGAAGGCAATA+GGG - chr3_3:41617824-41617843 None:intergenic 65.0%
AGGGCGCGGGAGAAGGCAAT+AGG - chr3_3:41617825-41617844 None:intergenic 65.0%
GACGACGCTGCTCCCTATGG+TGG + chr3_3:41620093-41620112 Msa0452620:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 41613408 41621106 41613408 ID=Msa0452620;Name=Msa0452620
chr3_3 mRNA 41613408 41621106 41613408 ID=Msa0452620-mRNA-1;Parent=Msa0452620;Name=Msa0452620-mRNA-1;_AED=0.33;_eAED=0.33;_QI=943|0|0|1|0.33|0.25|4|0|419
chr3_3 exon 41613408 41614445 41613408 ID=Msa0452620-mRNA-1:exon:7571;Parent=Msa0452620-mRNA-1
chr3_3 exon 41619837 41619981 41619837 ID=Msa0452620-mRNA-1:exon:7572;Parent=Msa0452620-mRNA-1
chr3_3 exon 41620000 41620239 41620000 ID=Msa0452620-mRNA-1:exon:7573;Parent=Msa0452620-mRNA-1
chr3_3 exon 41620327 41621106 41620327 ID=Msa0452620-mRNA-1:exon:7574;Parent=Msa0452620-mRNA-1
chr3_3 five_prime_UTR 41613408 41614350 41613408 ID=Msa0452620-mRNA-1:five_prime_utr;Parent=Msa0452620-mRNA-1
chr3_3 CDS 41614351 41614445 41614351 ID=Msa0452620-mRNA-1:cds;Parent=Msa0452620-mRNA-1
chr3_3 CDS 41619837 41619981 41619837 ID=Msa0452620-mRNA-1:cds;Parent=Msa0452620-mRNA-1
chr3_3 CDS 41620000 41620239 41620000 ID=Msa0452620-mRNA-1:cds;Parent=Msa0452620-mRNA-1
chr3_3 CDS 41620327 41621106 41620327 ID=Msa0452620-mRNA-1:cds;Parent=Msa0452620-mRNA-1
Gene Sequence

>Msa0452620

ATGATCTATATATGTGTTAGCTTTGCTTCATGTTTTGAACGGTTGCTGGCTGTATGCTTCATGCATATAGTTTTGATTTTAAATGGTTATTGGTTAAGAAGAATGAGTTACCACCGCGAATCAATCGCTAATTTAACGAAGAATGCTATGAACATCACCAAACATTTGCTATCAAAAACAGAATTCAAGAAGAAGAATGTCGTGCTTTCGCCGTTGTCATTCCAAACTGTGCTCAGCATAGGTCCAACACAACGTCAGCTTCTCTCCTTCCTTGGATCAAAATCCATTGACCATCTCAACTCCTTATCCTCTCACCTCTTTTCCTCTGTGCTAGACGACGCTGCTCCCTATGGTGGTCCACAGTTGTCTTTTGTCAACTCTGTTTGGTTTGAAAAATCCCTTTCTGTTTACCCTTCCTTCAAAGAAATTGTTGATACTAATTATTTTGCCACTCTCAGATCACTTGATTTCATAAACAAGGCTGATGAAGCCGTCAAAAAAGTGAATGTATGGGCAAAAAAAGAGACAAACGGACGTATTAGTGATGTTCTTTCACCTGGGTCTATTAATAGCTTAACTACGCTCATTTTTGCTAATGCACTATACTTTAAAGGAGCATGGCATCAACCATTTGATGCGTCAAAAACAAAAGACCGTGATTTTCACCTTCTCGGTGGCAGCTCAATCAAGGTTCCCTTCATGACTAGCAAAAAGAAGCAGTTTATAAATGCTTTTGATGGTTTTAAGATCCTTCGTCTTCCTTATAAGAAAGGCAACGATATTCGTCAATTCTCTATGTACTTTTTTCTTCCCGATGCAAGAGATGGATTGTTAGCTTTGATTGAGAAAGTGGCTTCCAAACCTGAGATTTTGAAACACAAACTTCCATGTAAGGAAGTGATAGTGGGTGACTTCAGGATTCCACATTTCAAAATTTATTCTGGACTTGAACTTTCTAATGTGTCAAAGGAGTTGGGAGTTGTTTTACCTTTCTCTGACGGAGGTTTGACAAAAATGGCGAACTCTCCGATTTGGGTTTCTAACATATTTCAAAAGTCTTTCATTGAAGTAAATGAAAAAGGCACTGAAGCTGCTGTAGTCACTAGAACCGGACTATCGGGATGTGCTCGTCCTACTTCAATTCCGACCCCAATAGACTTTGTAGCTGACCACCCTTTCATGTTTTTGATAAGAGACGATTTGTCTGGTACAATACTCTTTGTTGGCCAAGTGCTCAATCCTCTTGTTGGTAGATCATAA
Protein sequence

>Msa0452620

MIYICVSFASCFERLLAVCFMHIVLILNGYWLRRMSYHRESIANLTKNAMNITKHLLSKTEFKKKNVVLSPLSFQTVLSIGPTQRQLLSFLGSKSIDHLNSLSSHLFSSVLDDAAPYGGPQLSFVNSVWFEKSLSVYPSFKEIVDTNYFATLRSLDFINKADEAVKKVNVWAKKETNGRISDVLSPGSINSLTTLIFANALYFKGAWHQPFDASKTKDRDFHLLGGSSIKVPFMTSKKKQFINAFDGFKILRLPYKKGNDIRQFSMYFFLPDARDGLLALIEKVASKPEILKHKLPCKEVIVGDFRIPHFKIYSGLELSNVSKELGVVLPFSDGGLTKMANSPIWVSNIFQKSFIEVNEKGTEAAVVTRTGLSGCARPTSIPTPIDFVADHPFMFLIRDDLSGTILFVGQVLNPLVGRS*