Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944680 | XP_003619011.2 | 96.296 | 540 | 2 | 1 | 1 | 522 | 1 | 540 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944680 | sp|Q94K05|TCPQ_ARATH | 80.340 | 529 | 86 | 1 | 3 | 513 | 9 | 537 | 0.0 | 887 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944680 | G7KQ56 | 96.296 | 540 | 2 | 1 | 1 | 522 | 1 | 540 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0944680 | 0.819267 | 1.270647e-52 | -8.615850e-47 |
| Msa0027230 | Msa0944680 | 0.806898 | 6.578509e-50 | -8.615850e-47 |
| Msa0027260 | Msa0944680 | 0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0059040 | Msa0944680 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0059110 | Msa0944680 | 0.818942 | 1.506474e-52 | -8.615850e-47 |
| Msa0072420 | Msa0944680 | 0.817438 | 3.297693e-52 | -8.615850e-47 |
| Msa0105370 | Msa0944680 | 0.826167 | 3.147498e-54 | -8.615850e-47 |
| Msa0114870 | Msa0944680 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0119900 | Msa0944680 | 0.814187 | 1.750239e-51 | -8.615850e-47 |
| Msa0608320 | Msa0944680 | 0.833893 | 4.105604e-56 | -8.615850e-47 |
| Msa0615490 | Msa0944680 | 0.831060 | 2.067261e-55 | -8.615850e-47 |
| Msa0615710 | Msa0944680 | 0.825840 | 3.764350e-54 | -8.615850e-47 |
| Msa0626630 | Msa0944680 | 0.804055 | 2.595621e-49 | -8.615850e-47 |
| Msa0650050 | Msa0944680 | -0.800809 | 1.210605e-48 | -8.615850e-47 |
| Msa0661300 | Msa0944680 | 0.804484 | 2.112941e-49 | -8.615850e-47 |
| Msa0677530 | Msa0944680 | 0.815239 | 1.023841e-51 | -8.615850e-47 |
| Msa0689260 | Msa0944680 | 0.805277 | 1.442528e-49 | -8.615850e-47 |
| Msa0692040 | Msa0944680 | -0.801573 | 8.449962e-49 | -8.615850e-47 |
| Msa0698540 | Msa0944680 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
| Msa0722020 | Msa0944680 | 0.827012 | 1.978765e-54 | -8.615850e-47 |
| Msa0752700 | Msa0944680 | 0.803680 | 3.106096e-49 | -8.615850e-47 |
| Msa0763020 | Msa0944680 | 0.815450 | 9.187226e-52 | -8.615850e-47 |
| Msa0763070 | Msa0944680 | 0.811780 | 5.899056e-51 | -8.615850e-47 |
| Msa0765910 | Msa0944680 | 0.817739 | 2.820312e-52 | -8.615850e-47 |
| Msa0794970 | Msa0944680 | 0.801588 | 8.389881e-49 | -8.615850e-47 |
| Msa0831100 | Msa0944680 | 0.803046 | 4.201903e-49 | -8.615850e-47 |
| Msa0122970 | Msa0944680 | 0.804574 | 2.024004e-49 | -8.615850e-47 |
| Msa0188350 | Msa0944680 | 0.801714 | 7.902057e-49 | -8.615850e-47 |
| Msa0199880 | Msa0944680 | 0.803492 | 3.397532e-49 | -8.615850e-47 |
| Msa0229230 | Msa0944680 | 0.832434 | 9.472923e-56 | -8.615850e-47 |
| Msa0369450 | Msa0944680 | 0.828714 | 7.710747e-55 | -8.615850e-47 |
| Msa0380300 | Msa0944680 | 0.815838 | 7.528161e-52 | -8.615850e-47 |
| Msa0386800 | Msa0944680 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0388700 | Msa0944680 | 0.840774 | 7.102142e-58 | -8.615850e-47 |
| Msa0395820 | Msa0944680 | 0.834897 | 2.297528e-56 | -8.615850e-47 |
| Msa0450400 | Msa0944680 | -0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa0467380 | Msa0944680 | 0.805579 | 1.247195e-49 | -8.615850e-47 |
| Msa0255090 | Msa0944680 | 0.802692 | 4.971975e-49 | -8.615850e-47 |
| Msa0257490 | Msa0944680 | 0.801960 | 7.034468e-49 | -8.615850e-47 |
| Msa0281530 | Msa0944680 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
| Msa0288080 | Msa0944680 | 0.814715 | 1.337798e-51 | -8.615850e-47 |
| Msa0320590 | Msa0944680 | 0.845787 | 3.265850e-59 | -8.615850e-47 |
| Msa0330310 | Msa0944680 | 0.806826 | 6.812705e-50 | -8.615850e-47 |
| Msa0335730 | Msa0944680 | 0.805225 | 1.479179e-49 | -8.615850e-47 |
| Msa0357900 | Msa0944680 | 0.832342 | 9.982903e-56 | -8.615850e-47 |
| Msa0493410 | Msa0944680 | 0.846425 | 2.190275e-59 | -8.615850e-47 |
| Msa0512340 | Msa0944680 | 0.818720 | 1.691662e-52 | -8.615850e-47 |
| Msa0524110 | Msa0944680 | 0.805366 | 1.382054e-49 | -8.615850e-47 |
| Msa0524500 | Msa0944680 | 0.834400 | 3.063253e-56 | -8.615850e-47 |
| Msa0531530 | Msa0944680 | 0.813408 | 2.599156e-51 | -8.615850e-47 |
| Msa0542290 | Msa0944680 | 0.810770 | 9.771065e-51 | -8.615850e-47 |
| Msa0548240 | Msa0944680 | 0.806678 | 7.318979e-50 | -8.615850e-47 |
| Msa0556060 | Msa0944680 | 0.850767 | 1.372412e-60 | -8.615850e-47 |
| Msa0572840 | Msa0944680 | 0.803764 | 2.983664e-49 | -8.615850e-47 |
| Msa0581110 | Msa0944680 | 0.834334 | 3.183723e-56 | -8.615850e-47 |
| Msa0588260 | Msa0944680 | 0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0898040 | Msa0944680 | 0.811265 | 7.634179e-51 | -8.615850e-47 |
| Msa0932570 | Msa0944680 | 0.824549 | 7.601026e-54 | -8.615850e-47 |
| Msa0944680 | Msa1021470 | 0.809813 | 1.571906e-50 | -8.615850e-47 |
| Msa0944680 | Msa1060260 | 0.820087 | 8.255391e-53 | -8.615850e-47 |
| Msa0944680 | Msa1080290 | 0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa0944680 | Msa1081930 | 0.851354 | 9.374613e-61 | -8.615850e-47 |
| Msa0944680 | Msa1105460 | 0.809943 | 1.473776e-50 | -8.615850e-47 |
| Msa0944680 | Msa1106700 | 0.804508 | 2.088427e-49 | -8.615850e-47 |
| Msa0944680 | Msa1126830 | 0.832530 | 8.969342e-56 | -8.615850e-47 |
| Msa0944680 | Msa1128280 | 0.803657 | 3.139925e-49 | -8.615850e-47 |
| Msa0944680 | Msa1128600 | 0.843548 | 1.309729e-58 | -8.615850e-47 |
| Msa0944680 | Msa1148910 | 0.858340 | 8.810697e-63 | -8.615850e-47 |
| Msa0944680 | Msa1160590 | 0.817251 | 3.632605e-52 | -8.615850e-47 |
| Msa0944680 | Msa1165780 | 0.801090 | 1.060770e-48 | -8.615850e-47 |
| Msa0944680 | Msa1165940 | 0.819809 | 9.553857e-53 | -8.615850e-47 |
| Msa0944680 | Msa1174780 | 0.815849 | 7.489309e-52 | -8.615850e-47 |
| Msa0944680 | Msa1225700 | 0.815852 | 7.474790e-52 | -8.615850e-47 |
| Msa0944680 | Msa1234820 | 0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0944680 | Msa1244600 | 0.812291 | 4.564769e-51 | -8.615850e-47 |
| Msa0944680 | Msa1254730 | 0.817494 | 3.202784e-52 | -8.615850e-47 |
| Msa0944680 | Msa1332590 | 0.833314 | 5.727762e-56 | -8.615850e-47 |
| Msa0944680 | Msa1342410 | 0.832693 | 8.173230e-56 | -8.615850e-47 |
| Msa0944680 | Msa1351540 | 0.806047 | 9.943317e-50 | -8.615850e-47 |
| Msa0944680 | Msa1358250 | 0.803006 | 4.281997e-49 | -8.615850e-47 |
| Msa0944680 | Msa1376650 | 0.823446 | 1.379482e-53 | -8.615850e-47 |
| Msa0944680 | Msa1381350 | 0.825713 | 4.035276e-54 | -8.615850e-47 |
| Msa0944680 | Msa1392780 | 0.807695 | 4.457777e-50 | -8.615850e-47 |
| Msa0944680 | Msa1419870 | 0.829297 | 5.570557e-55 | -8.615850e-47 |
| Msa0944680 | Msa1459270 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944680 | MtrunA17_Chr6g0461541 | 96.296 | 540 | 2 | 1 | 1 | 522 | 1 | 540 | 0.0 | 1055 |
| Msa0944680 | MtrunA17_Chr1g0160221 | 88.540 | 541 | 42 | 3 | 1 | 522 | 4 | 543 | 0.0 | 967 |
| Msa0944680 | MtrunA17_Chr2g0282161 | 27.860 | 542 | 353 | 12 | 5 | 512 | 1 | 538 | 1.20e-59 | 206 |
| Msa0944680 | MtrunA17_Chr8g0380331 | 28.210 | 514 | 331 | 9 | 25 | 502 | 23 | 534 | 7.25e-54 | 190 |
| Msa0944680 | MtrunA17_Chr5g0440381 | 26.386 | 523 | 350 | 11 | 8 | 502 | 11 | 526 | 1.56e-53 | 190 |
| Msa0944680 | MtrunA17_Chr3g0123341 | 27.938 | 519 | 342 | 11 | 10 | 502 | 18 | 530 | 3.83e-49 | 177 |
| Msa0944680 | MtrunA17_Chr3g0139481 | 27.033 | 492 | 308 | 6 | 20 | 502 | 23 | 472 | 5.16e-49 | 176 |
| Msa0944680 | MtrunA17_Chr7g0241881 | 28.169 | 497 | 328 | 10 | 33 | 506 | 30 | 520 | 2.74e-46 | 169 |
| Msa0944680 | MtrunA17_Chr7g0272821 | 28.169 | 497 | 328 | 10 | 33 | 506 | 30 | 520 | 4.05e-45 | 166 |
| Msa0944680 | MtrunA17_Chr7g0214841 | 24.381 | 525 | 349 | 11 | 22 | 506 | 18 | 534 | 5.34e-32 | 129 |
| Msa0944680 | MtrunA17_Chr8g0392171 | 26.073 | 303 | 175 | 8 | 177 | 464 | 3 | 271 | 1.30e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944680 | AT3G03960.1 | 80.340 | 529 | 86 | 1 | 3 | 513 | 9 | 537 | 0.0 | 887 |
| Msa0944680 | AT3G18190.1 | 28.343 | 501 | 335 | 6 | 26 | 502 | 33 | 533 | 3.05e-63 | 216 |
| Msa0944680 | AT3G20050.1 | 28.405 | 514 | 330 | 9 | 25 | 502 | 23 | 534 | 5.86e-55 | 194 |
| Msa0944680 | AT3G11830.1 | 27.017 | 533 | 351 | 13 | 1 | 502 | 1 | 526 | 4.89e-54 | 191 |
| Msa0944680 | AT5G26360.1 | 27.413 | 518 | 342 | 10 | 26 | 512 | 24 | 538 | 1.08e-53 | 190 |
| Msa0944680 | AT3G11830.2 | 27.017 | 533 | 349 | 14 | 1 | 502 | 1 | 524 | 4.55e-52 | 186 |
| Msa0944680 | AT1G24510.1 | 27.907 | 516 | 336 | 11 | 15 | 502 | 23 | 530 | 2.78e-48 | 175 |
| Msa0944680 | AT5G20890.1 | 26.613 | 496 | 337 | 10 | 33 | 506 | 30 | 520 | 7.76e-40 | 152 |
| Msa0944680 | AT1G24510.3 | 26.483 | 472 | 312 | 10 | 59 | 502 | 13 | 477 | 4.96e-39 | 149 |
| Msa0944680 | AT1G24510.2 | 26.030 | 461 | 306 | 10 | 70 | 502 | 1 | 454 | 4.29e-35 | 137 |
| Msa0944680 | AT5G16070.1 | 24.466 | 515 | 350 | 11 | 27 | 506 | 23 | 533 | 4.51e-33 | 132 |
| Msa0944680 | AT3G02530.1 | 24.565 | 517 | 348 | 12 | 27 | 506 | 23 | 534 | 8.16e-33 | 132 |
| Msa0944680 | AT4G08640.1 | 36.782 | 174 | 79 | 4 | 176 | 348 | 3 | 146 | 1.97e-23 | 97.4 |
Find 134 sgRNAs with CRISPR-Local
Find 526 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCCTAAAATGAAGAAAT+TGG | 0.175666 | 6_3:-21652173 | None:intergenic |
| AAATCAGTGTATGAGGTTTA+TGG | 0.208119 | 6_3:-21652106 | None:intergenic |
| GCATCCTGCTGCCAAGATTT+TGG | 0.215841 | 6_3:+21653162 | Msa0944680:CDS |
| CTGAAATTGAATTAGCTAAA+AGG | 0.231233 | 6_3:+21658565 | Msa0944680:CDS |
| TGTTCGTGTTGCAAAGCTTT+TGG | 0.241786 | 6_3:+21653996 | Msa0944680:CDS |
| AAGGCTCAACAAGAGGAAAT+TGG | 0.270131 | 6_3:+21653196 | Msa0944680:CDS |
| TGCTTCAGGTATGAATAAAA+TGG | 0.271217 | 6_3:+21653069 | Msa0944680:intron |
| TTTAAGGTTGCTGTGTTTGC+TGG | 0.271623 | 6_3:+21655277 | Msa0944680:intron |
| TACCAAAGTTGGCATTGATT+TGG | 0.290054 | 6_3:+21659318 | Msa0944680:CDS |
| AAATGAAGAAATTGGGGATT+TGG | 0.290430 | 6_3:-21652165 | None:intergenic |
| GCATTCTCGGCCAAAGTTCT+TGG | 0.290944 | 6_3:-21659238 | None:intergenic |
| ATTTCGTTCTTCCCACAAAA+TGG | 0.294382 | 6_3:+21652199 | Msa0944680:exon |
| TATTCCTGCATGCAGACTTA+TGG | 0.303161 | 6_3:+21656645 | Msa0944680:intron |
| TGCATTTAGCCCGGCATTCT+CGG | 0.305009 | 6_3:-21659251 | None:intergenic |
| AATTTGACTATTTCGTTTGC+TGG | 0.309725 | 6_3:+21653229 | Msa0944680:CDS |
| AGTGATTATTGTTACCATTA+GGG | 0.309827 | 6_3:-21652343 | None:intergenic |
| ACATAACAGTGCAGTTGTTC+CGG | 0.310616 | 6_3:+21654029 | Msa0944680:CDS |
| TAAAATGGTTATAAATCATT+TGG | 0.322066 | 6_3:+21653084 | Msa0944680:CDS |
| GGAGCAGGTTGGTCTCTCCT+TGG | 0.325618 | 6_3:-21659913 | None:intergenic |
| CTTTATGCAGAACATGCTAA+TGG | 0.328847 | 6_3:+21659292 | Msa0944680:CDS |
| GCAGTTGCTAGCAAGCAATT+TGG | 0.328954 | 6_3:+21653792 | Msa0944680:CDS |
| AACCCTAAAATGAAGAAATT+GGG | 0.332598 | 6_3:-21652172 | None:intergenic |
| GGAGGAAGGCTCAGAGAATA+TGG | 0.336035 | 6_3:+21653728 | Msa0944680:CDS |
| TATTCAGTTCTACTATCATT+TGG | 0.342506 | 6_3:+21660055 | Msa0944680:three_prime_UTR |
| AACGTACCCTGTTTCCTTGT+AGG | 0.343378 | 6_3:-21658601 | None:intergenic |
| TTGTCCACATTAAAGTTTGC+AGG | 0.357634 | 6_3:-21653973 | None:intergenic |
| CTATGTATACAGTTGTTGTT+TGG | 0.359420 | 6_3:+21660092 | Msa0944680:three_prime_UTR |
| AGGCTCAACAAGAGGAAATT+GGG | 0.365250 | 6_3:+21653197 | Msa0944680:CDS |
| CATAACAGTGCAGTTGTTCC+GGG | 0.370426 | 6_3:+21654030 | Msa0944680:CDS |
| TCTGTTTCAGTCGAGGAAAT+TGG | 0.370760 | 6_3:+21656854 | Msa0944680:CDS |
| TCCGCAAATCCAAGATCATC+TGG | 0.377298 | 6_3:-21656830 | None:intergenic |
| ATGTCTCAACCATGAGGGTC+TGG | 0.382897 | 6_3:+21659359 | Msa0944680:CDS |
| CCCAGATGATCTTGGATTTG+CGG | 0.390935 | 6_3:+21656829 | Msa0944680:CDS |
| TCTCTCCTTGGGCCACCAGC+AGG | 0.398550 | 6_3:-21659901 | None:intergenic |
| GAGCAGGTTGGTCTCTCCTT+GGG | 0.402062 | 6_3:-21659912 | None:intergenic |
| CAACCAAACCCAGATGATCT+TGG | 0.413255 | 6_3:+21656821 | Msa0944680:CDS |
| AGAACTTTGGCCGAGAATGC+CGG | 0.420014 | 6_3:+21659241 | Msa0944680:CDS |
| ATCAAGGCAGTAGCGGATTC+TGG | 0.424019 | 6_3:+21656426 | Msa0944680:CDS |
| TCGAGGAAATTGGTGGTGCC+AGG | 0.426799 | 6_3:+21656864 | Msa0944680:CDS |
| TGAAATTGAATTAGCTAAAA+GGG | 0.429159 | 6_3:+21658566 | Msa0944680:CDS |
| AGAACTTCTCTTGGCCCTAA+TGG | 0.432399 | 6_3:+21652329 | Msa0944680:CDS |
| TTCCAAATCAATGCCAACTT+TGG | 0.434327 | 6_3:-21659320 | None:intergenic |
| AATCCAAGATCATCTGGGTT+TGG | 0.435232 | 6_3:-21656824 | None:intergenic |
| AGTTGAAATATTAGATGAAC+TGG | 0.440379 | 6_3:+21653704 | Msa0944680:intron |
| GAAGGTCACAAGCATCTATC+TGG | 0.441287 | 6_3:+21652248 | Msa0944680:CDS |
| AAGGTGCCGAGGAACTTATT+AGG | 0.442874 | 6_3:+21653263 | Msa0944680:CDS |
| TCAGTTCTCAAAACCATTCC+CGG | 0.446644 | 6_3:-21654048 | None:intergenic |
| CAGTGCAGTTGTTCCGGGAA+TGG | 0.449323 | 6_3:+21654035 | Msa0944680:CDS |
| TGAGATGATTCCAAGAACTT+TGG | 0.451715 | 6_3:+21659228 | Msa0944680:CDS |
| TTTGGAACCTGGTGTTTGTA+AGG | 0.460335 | 6_3:+21659336 | Msa0944680:CDS |
| ATTTGACTATTTCGTTTGCT+GGG | 0.461351 | 6_3:+21653230 | Msa0944680:CDS |
| TATGTATACAGTTGTTGTTT+GGG | 0.462671 | 6_3:+21660093 | Msa0944680:three_prime_UTR |
| CACCGTACTACGAGTCGATC+AGG | 0.465991 | 6_3:+21659593 | Msa0944680:CDS |
| GCTAATGGAAATACCAAAGT+TGG | 0.467287 | 6_3:+21659307 | Msa0944680:CDS |
| TGACGAAAGTGAGAGGGAAA+AGG | 0.474684 | 6_3:-21652069 | None:intergenic |
| ACTAGCCAAAACCAAAATCT+TGG | 0.474887 | 6_3:-21653173 | None:intergenic |
| TTATTTGTCAGGCCATGTGC+AGG | 0.477560 | 6_3:+21658511 | Msa0944680:intron |
| GAACTTTGGCCGAGAATGCC+GGG | 0.480537 | 6_3:+21659242 | Msa0944680:CDS |
| TTGCGACAGAACCAGTTGTT+CGG | 0.484623 | 6_3:-21656708 | None:intergenic |
| AGGAGAGACCAACCTGCTCC+TGG | 0.487866 | 6_3:+21659916 | Msa0944680:CDS |
| ATTTCAGTTGCAGCAGCTCC+AGG | 0.489458 | 6_3:-21658549 | None:intergenic |
| GAATATGGATGTGCGTGATA+AGG | 0.491496 | 6_3:+21653743 | Msa0944680:CDS |
| CAGCTCTTTCAAGATCATCT+AGG | 0.496025 | 6_3:-21657108 | None:intergenic |
| TGTCTCAACCATGAGGGTCT+GGG | 0.500177 | 6_3:+21659360 | Msa0944680:CDS |
| CAAGATCATCTGGGTTTGGT+TGG | 0.506048 | 6_3:-21656820 | None:intergenic |
| TGCCGAGGAACTTATTAGGA+TGG | 0.509165 | 6_3:+21653267 | Msa0944680:CDS |
| AGGGATAGCCGCATTGTACC+TGG | 0.509862 | 6_3:+21658531 | Msa0944680:CDS |
| AGGTTTGTGGGACATGAGTA+AGG | 0.510476 | 6_3:-21659965 | None:intergenic |
| GACGAAAGTGAGAGGGAAAA+GGG | 0.511604 | 6_3:-21652068 | None:intergenic |
| GCCGAGGAACTTATTAGGAT+GGG | 0.512153 | 6_3:+21653268 | Msa0944680:CDS |
| TCTCATACATTCAGCCGAGC+AGG | 0.513058 | 6_3:+21655339 | Msa0944680:CDS |
| TCTTCATCCATGCCAGGAGC+AGG | 0.513453 | 6_3:-21659928 | None:intergenic |
| TCCTTTAGTTTCAGTTGCAG+AGG | 0.520181 | 6_3:-21655311 | None:intergenic |
| ACCTCTGCAACTGAAACTAA+AGG | 0.521805 | 6_3:+21655310 | Msa0944680:CDS |
| TACCTGATCGACTCGTAGTA+CGG | 0.523767 | 6_3:-21659595 | None:intergenic |
| AACTAGTCTTCATCCATGCC+AGG | 0.528921 | 6_3:-21659934 | None:intergenic |
| ACCATCACTAGAACTTCTCT+TGG | 0.529088 | 6_3:+21652320 | Msa0944680:CDS |
| AAAACCAAAATCTTGGCAGC+AGG | 0.529463 | 6_3:-21653166 | None:intergenic |
| GTCAATTTGCTATACCTGCT+CGG | 0.533395 | 6_3:-21655353 | None:intergenic |
| ATTATTATGTCAAAACCTGC+TGG | 0.542007 | 6_3:+21659886 | Msa0944680:CDS |
| CGATGGAGTGAACACTTACA+AGG | 0.542508 | 6_3:+21657135 | Msa0944680:CDS |
| AGACCAACCTGCTCCTGGCA+TGG | 0.542798 | 6_3:+21659921 | Msa0944680:CDS |
| AATCTCCATTGCATTTAGCC+CGG | 0.545051 | 6_3:-21659260 | None:intergenic |
| GTTTCAGTCGAGGAAATTGG+TGG | 0.546603 | 6_3:+21656857 | Msa0944680:CDS |
| TGGTGGAGCCGTAGGAGAGA+TGG | 0.553393 | 6_3:+21656467 | Msa0944680:CDS |
| GGCTAGTAAGGCTCAACAAG+AGG | 0.559091 | 6_3:+21653189 | Msa0944680:CDS |
| ACCCATCCTAATAAGTTCCT+CGG | 0.559841 | 6_3:-21653269 | None:intergenic |
| TGCGGATTCTGTTTCAGTCG+AGG | 0.560194 | 6_3:+21656847 | Msa0944680:CDS |
| AATATTAGATGAACTGGTGG+AGG | 0.560544 | 6_3:+21653710 | Msa0944680:CDS |
| TGTCCACATTAAAGTTTGCA+GGG | 0.568433 | 6_3:-21653972 | None:intergenic |
| ATGCAAAGCCATCTCTCCTA+CGG | 0.571467 | 6_3:-21656475 | None:intergenic |
| AACAACTGGTTCTGTCGCAA+TGG | 0.571861 | 6_3:+21656711 | Msa0944680:CDS |
| TAAAGTAGAGGAGCTCATCA+AGG | 0.574164 | 6_3:+21656410 | Msa0944680:CDS |
| GTTGGCATTGATTTGGAACC+TGG | 0.574452 | 6_3:+21659325 | Msa0944680:CDS |
| CAACAAGAGGAAATTGGGGA+TGG | 0.575772 | 6_3:+21653202 | Msa0944680:CDS |
| TAGCAAGCAATTTGGTCAAG+AGG | 0.576189 | 6_3:+21653800 | Msa0944680:CDS |
| CAAAACCTGCTGGTGGCCCA+AGG | 0.577550 | 6_3:+21659896 | Msa0944680:CDS |
| AACTGAAGAGGCTAAAGTAG+AGG | 0.578759 | 6_3:+21656398 | Msa0944680:CDS |
| CATCCATGCCAGGAGCAGGT+TGG | 0.580972 | 6_3:-21659924 | None:intergenic |
| TGAAATATTAGATGAACTGG+TGG | 0.582730 | 6_3:+21653707 | Msa0944680:CDS |
| CGAGGAAATTGGTGGTGCCA+GGG | 0.582975 | 6_3:+21656865 | Msa0944680:CDS |
| GAATGCCGGGCTAAATGCAA+TGG | 0.584583 | 6_3:+21659255 | Msa0944680:CDS |
| ATTGTCAGTGGTGGAGCCGT+AGG | 0.585297 | 6_3:+21656459 | Msa0944680:CDS |
| ATCAGCAATAAGTGAGCAGA+GGG | 0.585726 | 6_3:-21653826 | None:intergenic |
| GCCAAGAGAAGTTCTAGTGA+TGG | 0.585781 | 6_3:-21652321 | None:intergenic |
| AAGGTTGCTGTGTTTGCTGG+AGG | 0.588919 | 6_3:+21655280 | Msa0944680:intron |
| AAGCTATTGACGAAAGTGAG+AGG | 0.591614 | 6_3:-21652076 | None:intergenic |
| ACCCTAAAATGAAGAAATTG+GGG | 0.593190 | 6_3:-21652171 | None:intergenic |
| ATGTAGATCCCAGACCCTCA+TGG | 0.593898 | 6_3:-21659368 | None:intergenic |
| AAGATCATCTAGGATACTAT+CGG | 0.598091 | 6_3:-21657098 | None:intergenic |
| TCTTCCCACAAAATGGCATA+CGG | 0.598682 | 6_3:+21652206 | Msa0944680:exon |
| TTAGATGAACTGGTGGAGGA+AGG | 0.599505 | 6_3:+21653714 | Msa0944680:CDS |
| TATTTGTCAGGCCATGTGCA+GGG | 0.599894 | 6_3:+21658512 | Msa0944680:intron |
| AAACCCTGCAAACTTTAATG+TGG | 0.601791 | 6_3:+21653969 | Msa0944680:CDS |
| CGGAATGCAATCGATGCTGA+AGG | 0.607815 | 6_3:+21652226 | Msa0944680:CDS |
| ATGCAATCGATGCTGAAGGA+AGG | 0.610295 | 6_3:+21652230 | Msa0944680:CDS |
| CCGCAAATCCAAGATCATCT+GGG | 0.621468 | 6_3:-21656829 | None:intergenic |
| GGAGCTCATCAAGGCAGTAG+CGG | 0.625122 | 6_3:+21656419 | Msa0944680:CDS |
| AGCTATTGACGAAAGTGAGA+GGG | 0.627712 | 6_3:-21652075 | None:intergenic |
| TTTGACTATTTCGTTTGCTG+GGG | 0.628512 | 6_3:+21653231 | Msa0944680:CDS |
| GGCTCAACAAGAGGAAATTG+GGG | 0.629238 | 6_3:+21653198 | Msa0944680:CDS |
| GAGACATCCTTACAAACACC+AGG | 0.636091 | 6_3:-21659343 | None:intergenic |
| TGGAAATTCTGTGGCCACTG+TGG | 0.644536 | 6_3:+21657060 | Msa0944680:CDS |
| GCGAAAGTGATTGTCAGTGG+TGG | 0.647300 | 6_3:+21656450 | Msa0944680:CDS |
| CTTGAAAGAGCTGTTGACGA+TGG | 0.657033 | 6_3:+21657118 | Msa0944680:CDS |
| TAAGGATGTCTCAACCATGA+GGG | 0.661073 | 6_3:+21659354 | Msa0944680:CDS |
| CATCAGCAATAAGTGAGCAG+AGG | 0.662850 | 6_3:-21653827 | None:intergenic |
| GTAAGGATGTCTCAACCATG+AGG | 0.676348 | 6_3:+21659353 | Msa0944680:CDS |
| TGAAGTTGATGGAAATTCTG+TGG | 0.680557 | 6_3:+21657051 | Msa0944680:CDS |
| ATTATGTCAAAACCTGCTGG+TGG | 0.692903 | 6_3:+21659889 | Msa0944680:CDS |
| GGTGCGAAAGTGATTGTCAG+TGG | 0.700135 | 6_3:+21656447 | Msa0944680:CDS |
| CAGCAGCTCCAGGTACAATG+CGG | 0.705570 | 6_3:-21658539 | None:intergenic |
| AATGCGGCTATCCCTGCACA+TGG | 0.705979 | 6_3:-21658523 | None:intergenic |
| ACTTCCTCGTAAAACCACAG+TGG | 0.806467 | 6_3:-21657074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTATTTTTTTAT+TGG | + | chr6_3:21657555-21657574 | Msa0944680:intron | 0.0% |
| !!! | TTATTTTTTATTTTTTTATT+GGG | + | chr6_3:21657556-21657575 | Msa0944680:intron | 0.0% |
| !!! | TTTATTTTTTATTTTTTATT+GGG | - | chr6_3:21658131-21658150 | None:intergenic | 0.0% |
| !!! | TTTTATTTTTTATTTTTTAT+TGG | - | chr6_3:21658132-21658151 | None:intergenic | 0.0% |
| !!! | TTCATAAATTTTTAGATTTT+TGG | + | chr6_3:21652366-21652385 | Msa0944680:intron | 10.0% |
| !!! | TTATTTAAAACAACAAAAAA+GGG | - | chr6_3:21656533-21656552 | None:intergenic | 10.0% |
| !!! | ATTATTTAAAACAACAAAAA+AGG | - | chr6_3:21656534-21656553 | None:intergenic | 10.0% |
| !! | ATTCATTATAATTAACTAAA+GGG | + | chr6_3:21657335-21657354 | Msa0944680:intron | 10.0% |
| !! | TTATTAAGAAATTTAGTTAA+GGG | - | chr6_3:21658351-21658370 | None:intergenic | 10.0% |
| !!! | AAAAATTTTAAGATAAAGTT+TGG | - | chr6_3:21659062-21659081 | None:intergenic | 10.0% |
| !!! | TATTTAATAATCTTTTTTGA+TGG | + | chr6_3:21659158-21659177 | Msa0944680:intron | 10.0% |
| !!! | GTAATTTTTAGTTGATTTTT+TGG | + | chr6_3:21652538-21652557 | Msa0944680:intron | 15.0% |
| !! | TAAAATGGTTATAAATCATT+TGG | + | chr6_3:21653084-21653103 | Msa0944680:CDS | 15.0% |
| !! | AGTTCATTATAAACTATAAA+AGG | - | chr6_3:21656292-21656311 | None:intergenic | 15.0% |
| !! | CTTAAAATAAGAACAAAAAT+AGG | - | chr6_3:21656973-21656992 | None:intergenic | 15.0% |
| !!! | TTTTAACTTATATTAAAGAC+AGG | - | chr6_3:21657169-21657188 | None:intergenic | 15.0% |
| !!! | TAAAAATTGCTCATATATTT+TGG | + | chr6_3:21657184-21657203 | Msa0944680:intron | 15.0% |
| !! | GATTCATTATAATTAACTAA+AGG | + | chr6_3:21657334-21657353 | Msa0944680:intron | 15.0% |
| !! | TCTAAAAAAAAAATTTCCTA+GGG | - | chr6_3:21658277-21658296 | None:intergenic | 15.0% |
| !! | ATCTAAAAAAAAAATTTCCT+AGG | - | chr6_3:21658276-21658295 | None:intergenic | 15.0% |
| !! | CGAAAAATTAATAAAAAATC+TGG | + | chr6_3:21657831-21657850 | Msa0944680:intron | 15.0% |
| !! | GAAAAATAATGAAAAAATTC+TGG | + | chr6_3:21657920-21657939 | Msa0944680:intron | 15.0% |
| !! | TGGAAAAATAAAAAAAATTC+TGG | - | chr6_3:21658010-21658029 | None:intergenic | 15.0% |
| !! | ATCTAAAAAAAAAATTTCCT+AGG | + | chr6_3:21658276-21658295 | Msa0944680:intron | 15.0% |
| !! | TCTAAAAAAAAAATTTCCTA+GGG | + | chr6_3:21658277-21658296 | Msa0944680:intron | 15.0% |
| !! | GTTATTAAGAAATTTAGTTA+AGG | - | chr6_3:21658352-21658371 | None:intergenic | 15.0% |
| !! | TACATTCTCTTAAATTATTA+AGG | + | chr6_3:21658886-21658905 | Msa0944680:intron | 15.0% |
| !! | TTATAACATCTTAAGAAAAA+GGG | - | chr6_3:21659658-21659677 | None:intergenic | 15.0% |
| !!! | TAAATTCAAAATTTTTAAGG+AGG | - | chr6_3:21659988-21660007 | None:intergenic | 15.0% |
| !!! | GAAGTCATAGATTAATTTTT+TGG | - | chr6_3:21652029-21652048 | None:intergenic | 20.0% |
| !!! | AAAATTTAGATTTTGATAGG+TGG | + | chr6_3:21652437-21652456 | Msa0944680:intron | 20.0% |
| !!! | AAATTTAGATTTTGATAGGT+GGG | + | chr6_3:21652438-21652457 | Msa0944680:intron | 20.0% |
| !!! | AAAGTTTAGATTTTGATTTG+TGG | + | chr6_3:21652622-21652641 | Msa0944680:intron | 20.0% |
| !!! | AAGTTTAGATTTTGATTTGT+GGG | + | chr6_3:21652623-21652642 | Msa0944680:intron | 20.0% |
| !! | TTGCAAAAAAATCTAAGAAA+TGG | - | chr6_3:21652769-21652788 | None:intergenic | 20.0% |
| !!! | AAAGTTTAGATTTTGATATG+TGG | + | chr6_3:21652831-21652850 | Msa0944680:intron | 20.0% |
| !!! | AAGTTTAGATTTTGATATGT+GGG | + | chr6_3:21652832-21652851 | Msa0944680:intron | 20.0% |
| !! | ATATACTAAAGCAATCAATA+AGG | + | chr6_3:21653318-21653337 | Msa0944680:intron | 20.0% |
| !!! | CAATACCAATGTTTTAAAAT+CGG | - | chr6_3:21653632-21653651 | None:intergenic | 20.0% |
| !! | GCATCTTAACATAATAAAAT+GGG | - | chr6_3:21653871-21653890 | None:intergenic | 20.0% |
| !! | AGCATCTTAACATAATAAAA+TGG | - | chr6_3:21653872-21653891 | None:intergenic | 20.0% |
| !! | TTTATTATGTTAAGATGCTT+TGG | + | chr6_3:21653873-21653892 | Msa0944680:intron | 20.0% |
| !!! | TTGTTTTGTTTGAATTTGAT+TGG | + | chr6_3:21655153-21655172 | Msa0944680:intron | 20.0% |
| !!! | TCTTTTGTTAATGTTGTTTA+AGG | + | chr6_3:21655261-21655280 | Msa0944680:intron | 20.0% |
| !!! | ATTCAATAATTCCATTTTCT+CGG | - | chr6_3:21655507-21655526 | None:intergenic | 20.0% |
| !! | TCTATATTGTGTTGAAATTT+GGG | - | chr6_3:21656183-21656202 | None:intergenic | 20.0% |
| !! | TTCTATATTGTGTTGAAATT+TGG | - | chr6_3:21656184-21656203 | None:intergenic | 20.0% |
| !!! | TTTAAGATAATTTGTGCTAT+TGG | + | chr6_3:21656209-21656228 | Msa0944680:intron | 20.0% |
| !! | AAACTATAAAAGGAAAATGT+TGG | - | chr6_3:21656282-21656301 | None:intergenic | 20.0% |
| !!! | GCATTTTTCAAATTATTTGA+TGG | + | chr6_3:21656316-21656335 | Msa0944680:intron | 20.0% |
| !!! | TTCAAATTATTTGATGGTTT+TGG | + | chr6_3:21656322-21656341 | Msa0944680:intron | 20.0% |
| !! | AATAAACAATACACATATCA+CGG | - | chr6_3:21656613-21656632 | None:intergenic | 20.0% |
| !! | AAGAATTACATAAGAAAACA+AGG | - | chr6_3:21656924-21656943 | None:intergenic | 20.0% |
| !!! | GTAATTCTTTTTACAAGTAT+TGG | + | chr6_3:21656935-21656954 | Msa0944680:intron | 20.0% |
| !! | ATAAGAACAAAAATAGGTTA+GGG | - | chr6_3:21656967-21656986 | None:intergenic | 20.0% |
| !! | AATAAGAACAAAAATAGGTT+AGG | - | chr6_3:21656968-21656987 | None:intergenic | 20.0% |
| !!! | TTTTGTTCTTATTTTAAGTG+TGG | + | chr6_3:21656975-21656994 | Msa0944680:intron | 20.0% |
| !! | ATATAAATTATTAGCGTGAA+CGG | - | chr6_3:21657231-21657250 | None:intergenic | 20.0% |
| !!! | TAATTTTTTATGAGATCAAG+TGG | + | chr6_3:21657312-21657331 | Msa0944680:intron | 20.0% |
| !! | TAATTAACTAAAGGGTTAAT+AGG | + | chr6_3:21657343-21657362 | Msa0944680:intron | 20.0% |
| !! | TAAAAAAAAAATTTCCTAGG+GGG | - | chr6_3:21658279-21658298 | None:intergenic | 20.0% |
| !! | CTAAAAAAAAAATTTCCTAG+GGG | - | chr6_3:21658278-21658297 | None:intergenic | 20.0% |
| !! | TCTGGAAAATAAAAAAATTC+TGG | + | chr6_3:21657938-21657957 | Msa0944680:intron | 20.0% |
| !!! | AAAAAATTCTGGAAAAATTC+TGG | - | chr6_3:21657999-21658018 | None:intergenic | 20.0% |
| !! | CTAAAAAAAAAATTTCCTAG+GGG | + | chr6_3:21658278-21658297 | Msa0944680:intron | 20.0% |
| !! | TAAAAAAAAAATTTCCTAGG+GGG | + | chr6_3:21658279-21658298 | Msa0944680:intron | 20.0% |
| !! | AAATTTAGTTAAGGGTTAAT+AGG | - | chr6_3:21658343-21658362 | None:intergenic | 20.0% |
| !! | TGAAATTGAATTAGCTAAAA+GGG | + | chr6_3:21658566-21658585 | Msa0944680:CDS | 20.0% |
| !! | TATCTTACAGATTATTACTT+TGG | + | chr6_3:21659094-21659113 | Msa0944680:intron | 20.0% |
| !!! | AAAATCTAGTTTCATGAATT+AGG | - | chr6_3:21659463-21659482 | None:intergenic | 20.0% |
| !! | CTTATAACATCTTAAGAAAA+AGG | - | chr6_3:21659659-21659678 | None:intergenic | 20.0% |
| !! | TATGTATTTGCAATAATTGT+CGG | - | chr6_3:21659777-21659796 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGCATAGATTTA+TGG | + | chr6_3:21659830-21659849 | Msa0944680:intron | 20.0% |
| ! | AACCCTAAAATGAAGAAATT+GGG | - | chr6_3:21652175-21652194 | None:intergenic | 25.0% |
| ! | TAACCCTAAAATGAAGAAAT+TGG | - | chr6_3:21652176-21652195 | None:intergenic | 25.0% |
| !!! | ATTTCTTCATTTTAGGGTTA+CGG | + | chr6_3:21652176-21652195 | Msa0944680:five_prime_UTR | 25.0% |
| ! | AGTGATTATTGTTACCATTA+GGG | - | chr6_3:21652346-21652365 | None:intergenic | 25.0% |
| ! | AAGTGATTATTGTTACCATT+AGG | - | chr6_3:21652347-21652366 | None:intergenic | 25.0% |
| !!! | TAGATTTTTGGTTGCAATTT+TGG | + | chr6_3:21652378-21652397 | Msa0944680:intron | 25.0% |
| !! | ATGAATCCCAATTGAATTTT+GGG | + | chr6_3:21652401-21652420 | Msa0944680:intron | 25.0% |
| ! | TAAAAGCCCAAAATTCAATT+GGG | - | chr6_3:21652410-21652429 | None:intergenic | 25.0% |
| !!! | CGGAAAATTTAGATTTTGAT+AGG | + | chr6_3:21652434-21652453 | Msa0944680:intron | 25.0% |
| ! | AAATTATACGCAACAAAAAC+AGG | + | chr6_3:21653513-21653532 | Msa0944680:intron | 25.0% |
| !!! | TATTGTAGTCTTATTGAATC+GGG | - | chr6_3:21653567-21653586 | None:intergenic | 25.0% |
| !!! | GTATTGTAGTCTTATTGAAT+CGG | - | chr6_3:21653568-21653587 | None:intergenic | 25.0% |
| ! | AATAAGACTACAATACAATC+AGG | + | chr6_3:21653572-21653591 | Msa0944680:intron | 25.0% |
| !!! | TACATCCGATTTTAAAACAT+TGG | + | chr6_3:21653624-21653643 | Msa0944680:intron | 25.0% |
| ! | AGTTGAAATATTAGATGAAC+TGG | + | chr6_3:21653704-21653723 | Msa0944680:intron | 25.0% |
| !!! | TACTTTTGTTTCGAAAATAC+AGG | + | chr6_3:21653924-21653943 | Msa0944680:intron | 25.0% |
| !! | TGTAAACAGAATCGTTTTAA+TGG | + | chr6_3:21654227-21654246 | Msa0944680:intron | 25.0% |
| !!! | TGACATTTTGATTAATGTGA+AGG | + | chr6_3:21654457-21654476 | Msa0944680:intron | 25.0% |
| !!! | TCGCTTTTTGGTAAATATTT+AGG | + | chr6_3:21654500-21654519 | Msa0944680:intron | 25.0% |
| ! | AAATATTTAGGCAGTACATT+TGG | + | chr6_3:21654512-21654531 | Msa0944680:intron | 25.0% |
| !! | TATTTTCTCAAATTGATGTG+TGG | + | chr6_3:21654769-21654788 | Msa0944680:intron | 25.0% |
| !!! | AATCATTTTCTGAAACCAAA+CGG | + | chr6_3:21655040-21655059 | Msa0944680:intron | 25.0% |
| !! | TATTTTTCATACTTACTTGG+TGG | - | chr6_3:21655066-21655085 | None:intergenic | 25.0% |
| !!! | AGCTATTTTTCATACTTACT+TGG | - | chr6_3:21655069-21655088 | None:intergenic | 25.0% |
| !! | TTCTAATGATTTTACCATCA+TGG | + | chr6_3:21655110-21655129 | Msa0944680:intron | 25.0% |
| !! | TTATCTCCATGAAATTTTAC+TGG | + | chr6_3:21655209-21655228 | Msa0944680:intron | 25.0% |
| !! | GATTTCTCTTTTCTTTTAAC+TGG | + | chr6_3:21655396-21655415 | Msa0944680:intron | 25.0% |
| ! | TTCATATGATAGACAAGTTT+GGG | - | chr6_3:21655723-21655742 | None:intergenic | 25.0% |
| ! | TTTCATATGATAGACAAGTT+TGG | - | chr6_3:21655724-21655743 | None:intergenic | 25.0% |
| ! | TTCAAATAGTTTCTAAGCAA+AGG | - | chr6_3:21655917-21655936 | None:intergenic | 25.0% |
| ! | CTATATTGTGTTGAAATTTG+GGG | - | chr6_3:21656182-21656201 | None:intergenic | 25.0% |
| ! | AAACTATTCAAAAACTGAAG+AGG | + | chr6_3:21656386-21656405 | Msa0944680:CDS | 25.0% |
| ! | ATAAGAAAACAAGGAAACAA+CGG | - | chr6_3:21656915-21656934 | None:intergenic | 25.0% |
| !!! | ATCAACTTCATTTTTCACAA+TGG | - | chr6_3:21657041-21657060 | None:intergenic | 25.0% |
| ! | ATTGTGAAAAATGAAGTTGA+TGG | + | chr6_3:21657040-21657059 | Msa0944680:CDS | 25.0% |
| ! | AACTTATATTAAAGACAGGA+GGG | - | chr6_3:21657165-21657184 | None:intergenic | 25.0% |
| ! | TAACTTATATTAAAGACAGG+AGG | - | chr6_3:21657166-21657185 | None:intergenic | 25.0% |
| ! | ACCGAAGAATTTATATCAAT+CGG | + | chr6_3:21658401-21658420 | Msa0944680:intron | 25.0% |
| !! | ATTGAGAGAAAAATGCATTT+TGG | - | chr6_3:21658441-21658460 | None:intergenic | 25.0% |
| ! | CTGAAATTGAATTAGCTAAA+AGG | + | chr6_3:21658565-21658584 | Msa0944680:CDS | 25.0% |
| !!! | TGAAAACACATGTCTTTTTT+AGG | - | chr6_3:21658646-21658665 | None:intergenic | 25.0% |
| ! | AATCATGATAGTAAATACTG+AGG | - | chr6_3:21658976-21658995 | None:intergenic | 25.0% |
| !!! | CAGATTATTACTTTGGAATT+AGG | + | chr6_3:21659101-21659120 | Msa0944680:intron | 25.0% |
| ! | GCATTAAAAAATAGCTTACT+TGG | - | chr6_3:21659398-21659417 | None:intergenic | 25.0% |
| ! | AATACATACAGCTTATGTTA+AGG | + | chr6_3:21659789-21659808 | Msa0944680:intron | 25.0% |
| ! | ATACATACAGCTTATGTTAA+GGG | + | chr6_3:21659790-21659809 | Msa0944680:intron | 25.0% |
| !!! | AAATTTTTAAGGAGGTTTGT+GGG | - | chr6_3:21659980-21659999 | None:intergenic | 25.0% |
| !!! | AAAATTTTTAAGGAGGTTTG+TGG | - | chr6_3:21659981-21660000 | None:intergenic | 25.0% |
| ! | TATTCAGTTCTACTATCATT+TGG | + | chr6_3:21660055-21660074 | Msa0944680:three_prime_UTR | 25.0% |
| !!! | TATGTATACAGTTGTTGTTT+GGG | + | chr6_3:21660093-21660112 | Msa0944680:three_prime_UTR | 25.0% |
| AAATCAGTGTATGAGGTTTA+TGG | - | chr6_3:21652109-21652128 | None:intergenic | 30.0% | |
| !!! | AGTTTTGAAATCAGTGTATG+AGG | - | chr6_3:21652116-21652135 | None:intergenic | 30.0% |
| AAATGAAGAAATTGGGGATT+TGG | - | chr6_3:21652168-21652187 | None:intergenic | 30.0% | |
| ! | ATCCCCAATTTCTTCATTTT+AGG | + | chr6_3:21652169-21652188 | Msa0944680:five_prime_UTR | 30.0% |
| ! | TCCCCAATTTCTTCATTTTA+GGG | + | chr6_3:21652170-21652189 | Msa0944680:five_prime_UTR | 30.0% |
| ACCCTAAAATGAAGAAATTG+GGG | - | chr6_3:21652174-21652193 | None:intergenic | 30.0% | |
| ! | GATGAATCCCAATTGAATTT+TGG | + | chr6_3:21652400-21652419 | Msa0944680:intron | 30.0% |
| CTAAAAGCCCAAAATTCAAT+TGG | - | chr6_3:21652411-21652430 | None:intergenic | 30.0% | |
| ! | GAATTTTGGGCTTTTAGATT+CGG | + | chr6_3:21652414-21652433 | Msa0944680:intron | 30.0% |
| !! | TAGATTTTGATATGTGGGTA+TGG | + | chr6_3:21652837-21652856 | Msa0944680:intron | 30.0% |
| GTTTGCATAAGAAAGTGAAT+TGG | + | chr6_3:21652976-21652995 | Msa0944680:intron | 30.0% | |
| CATAAGAAAGTGAATTGGAT+TGG | + | chr6_3:21652981-21653000 | Msa0944680:intron | 30.0% | |
| ! | TGGTTTGGCTAAATTTAGAA+TGG | + | chr6_3:21653018-21653037 | Msa0944680:intron | 30.0% |
| TGCTTCAGGTATGAATAAAA+TGG | + | chr6_3:21653069-21653088 | Msa0944680:intron | 30.0% | |
| AATTTGACTATTTCGTTTGC+TGG | + | chr6_3:21653229-21653248 | Msa0944680:CDS | 30.0% | |
| ATTTGACTATTTCGTTTGCT+GGG | + | chr6_3:21653230-21653249 | Msa0944680:CDS | 30.0% | |
| !!! | CATTCCAGGTTTTAAAACAT+TGG | - | chr6_3:21653387-21653406 | None:intergenic | 30.0% |
| !!! | CAATGTTTTAAAACCTGGAA+TGG | + | chr6_3:21653385-21653404 | Msa0944680:intron | 30.0% |
| TATATGTCATCCAGTTCAAA+TGG | - | chr6_3:21653465-21653484 | None:intergenic | 30.0% | |
| AGAGATAGTATGACATTTGA+AGG | - | chr6_3:21653660-21653679 | None:intergenic | 30.0% | |
| TGAAATATTAGATGAACTGG+TGG | + | chr6_3:21653707-21653726 | Msa0944680:CDS | 30.0% | |
| !!! | TAAAGTTTGCAGGGTTTTTT+GGG | - | chr6_3:21653966-21653985 | None:intergenic | 30.0% |
| !!! | TTAAAGTTTGCAGGGTTTTT+TGG | - | chr6_3:21653967-21653986 | None:intergenic | 30.0% |
| AAAGCATACTGAAAAAGCAA+AGG | + | chr6_3:21654086-21654105 | Msa0944680:CDS | 30.0% | |
| GTTATTCCATCTTATCTACT+TGG | - | chr6_3:21654669-21654688 | None:intergenic | 30.0% | |
| TTTGAGAAAATAGTTGATCC+TGG | - | chr6_3:21654761-21654780 | None:intergenic | 30.0% | |
| CTATACAAATAGTGAAAGCA+AGG | - | chr6_3:21654907-21654926 | None:intergenic | 30.0% | |
| TTATGCTTGCGTATTTGTAT+AGG | - | chr6_3:21654967-21654986 | None:intergenic | 30.0% | |
| ! | AAACAGATTTTAAGCCATGA+TGG | - | chr6_3:21655127-21655146 | None:intergenic | 30.0% |
| AATCTGCCAGTAAAATTTCA+TGG | - | chr6_3:21655218-21655237 | None:intergenic | 30.0% | |
| !!! | ACCCTATTTTAGCCTTTATT+CGG | - | chr6_3:21655675-21655694 | None:intergenic | 30.0% |
| GAAAATTGTATATCCTTGTC+TGG | + | chr6_3:21655740-21655759 | Msa0944680:intron | 30.0% | |
| ! | ATGGAGGTACAAACAAATAA+AGG | - | chr6_3:21655837-21655856 | None:intergenic | 30.0% |
| AAACTTGTAACACAATACGT+TGG | + | chr6_3:21655949-21655968 | Msa0944680:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr6_3:21656111-21656130 | Msa0944680:intron | 30.0% | |
| ATTACCTGATACTGTACTAA+TGG | + | chr6_3:21656241-21656260 | Msa0944680:intron | 30.0% | |
| ! | GGAGGAAAATAAAATGGATT+AGG | - | chr6_3:21656784-21656803 | None:intergenic | 30.0% |
| ! | AAGATCATCTAGGATACTAT+CGG | - | chr6_3:21657101-21657120 | None:intergenic | 30.0% |
| AAAAGTCACCTATATTACAG+GGG | - | chr6_3:21658309-21658328 | None:intergenic | 30.0% | |
| CAAAAGTCACCTATATTACA+GGG | - | chr6_3:21658308-21658327 | None:intergenic | 30.0% | |
| ! | CAAAGAATCTTCATTTTACG+AGG | - | chr6_3:21658248-21658267 | None:intergenic | 30.0% |
| CTCGTAAAATGAAGATTCTT+TGG | + | chr6_3:21657436-21657455 | Msa0944680:intron | 30.0% | |
| CTCGTAAAATGAAGATTCTT+TGG | - | chr6_3:21657436-21657455 | None:intergenic | 30.0% | |
| ! | CAAAGAATCTTCATTTTACG+AGG | + | chr6_3:21658248-21658267 | Msa0944680:intron | 30.0% |
| CAAAAGTCACCTATATTACA+GGG | + | chr6_3:21658308-21658327 | Msa0944680:intron | 30.0% | |
| AAAAGTCACCTATATTACAG+GGG | + | chr6_3:21658309-21658328 | Msa0944680:intron | 30.0% | |
| ATAAATTCTTCGGTTTACAG+AGG | - | chr6_3:21658395-21658414 | None:intergenic | 30.0% | |
| CCCGATTGATATAAATTCTT+CGG | - | chr6_3:21658405-21658424 | None:intergenic | 30.0% | |
| CCGAAGAATTTATATCAATC+GGG | + | chr6_3:21658402-21658421 | Msa0944680:intron | 30.0% | |
| CTTCTGTTCAATTATTTGTC+AGG | + | chr6_3:21658500-21658519 | Msa0944680:intron | 30.0% | |
| ! | AAAGACATGTGTTTTCAATG+CGG | + | chr6_3:21658649-21658668 | Msa0944680:intron | 30.0% |
| ATTTGATTGCTAGTTGCATA+TGG | + | chr6_3:21658713-21658732 | Msa0944680:intron | 30.0% | |
| ACACTTCACATTGAAAGTTT+CGG | + | chr6_3:21658844-21658863 | Msa0944680:intron | 30.0% | |
| !! | CTATCATGATTAGTTTGTTG+TGG | + | chr6_3:21658985-21659004 | Msa0944680:intron | 30.0% |
| TGTGGTTCAATGCAATTTAT+TGG | + | chr6_3:21659003-21659022 | Msa0944680:intron | 30.0% | |
| GTGGTTCAATGCAATTTATT+GGG | + | chr6_3:21659004-21659023 | Msa0944680:intron | 30.0% | |
| !! | TTTTTGATGGTTCTACAGAT+TGG | + | chr6_3:21659171-21659190 | Msa0944680:intron | 30.0% |
| GTTGAATTAGACTTACCATA+TGG | + | chr6_3:21659499-21659518 | Msa0944680:intron | 30.0% | |
| TATCAAACGAGTATTCCATA+TGG | - | chr6_3:21659517-21659536 | None:intergenic | 30.0% | |
| !!! | AATGGCGATTTTGGAATTTA+CGG | - | chr6_3:21659742-21659761 | None:intergenic | 30.0% |
| ATTATTATGTCAAAACCTGC+TGG | + | chr6_3:21659886-21659905 | Msa0944680:CDS | 30.0% | |
| ! | TAATTTCATCCCTCTTTTTG+AGG | + | chr6_3:21660030-21660049 | Msa0944680:three_prime_UTR | 30.0% |
| ! | AATTTCATCCCTCTTTTTGA+GGG | + | chr6_3:21660031-21660050 | Msa0944680:three_prime_UTR | 30.0% |
| ! | CTATGTATACAGTTGTTGTT+TGG | + | chr6_3:21660092-21660111 | Msa0944680:three_prime_UTR | 30.0% |
| ATTTCGTTCTTCCCACAAAA+TGG | + | chr6_3:21652199-21652218 | Msa0944680:exon | 35.0% | |
| ! | TCTAGTGTTTTTCACTGAAC+AGG | + | chr6_3:21652883-21652902 | Msa0944680:intron | 35.0% |
| ! | CTAGTGTTTTTCACTGAACA+GGG | + | chr6_3:21652884-21652903 | Msa0944680:intron | 35.0% |
| ! | AATTGGATTGGAGAATGAAC+TGG | + | chr6_3:21652993-21653012 | Msa0944680:intron | 35.0% |
| !! | TGTGTTGTTTATTCTGCTTC+AGG | + | chr6_3:21653055-21653074 | Msa0944680:intron | 35.0% |
| ACTAGCCAAAACCAAAATCT+TGG | - | chr6_3:21653176-21653195 | None:intergenic | 35.0% | |
| !!! | GATTTTGGTTTTGGCTAGTA+AGG | + | chr6_3:21653177-21653196 | Msa0944680:CDS | 35.0% |
| ! | TTTGACTATTTCGTTTGCTG+GGG | + | chr6_3:21653231-21653250 | Msa0944680:CDS | 35.0% |
| TTAAAACCTGGAATGGAGAT+TGG | + | chr6_3:21653392-21653411 | Msa0944680:intron | 35.0% | |
| TATACGCAACAAAAACAGGT+TGG | + | chr6_3:21653517-21653536 | Msa0944680:intron | 35.0% | |
| CTTATTGAATCGGGTTAAAC+CGG | - | chr6_3:21653558-21653577 | None:intergenic | 35.0% | |
| TACAATCAGGATCAAACTAC+CGG | + | chr6_3:21653585-21653604 | Msa0944680:intron | 35.0% | |
| AATATTAGATGAACTGGTGG+AGG | + | chr6_3:21653710-21653729 | Msa0944680:CDS | 35.0% | |
| CATAATAAAATGGGACAAGC+AGG | - | chr6_3:21653862-21653881 | None:intergenic | 35.0% | |
| AAACCCTGCAAACTTTAATG+TGG | + | chr6_3:21653969-21653988 | Msa0944680:CDS | 35.0% | |
| TGTCCACATTAAAGTTTGCA+GGG | - | chr6_3:21653975-21653994 | None:intergenic | 35.0% | |
| TTGTCCACATTAAAGTTTGC+AGG | - | chr6_3:21653976-21653995 | None:intergenic | 35.0% | |
| !! | TTTTGAGAACTGATGCTGTT+GGG | + | chr6_3:21654058-21654077 | Msa0944680:CDS | 35.0% |
| CTTTATACACGCTGTCTTAT+TGG | + | chr6_3:21654115-21654134 | Msa0944680:intron | 35.0% | |
| GAGAATTTGAGAGAGAGAAA+AGG | + | chr6_3:21654198-21654217 | Msa0944680:intron | 35.0% | |
| AGAGCTAACAATTGAACACA+TGG | + | chr6_3:21654283-21654302 | Msa0944680:intron | 35.0% | |
| !!! | AAGGCTACGCTTTTTAGTTT+TGG | + | chr6_3:21654476-21654495 | Msa0944680:intron | 35.0% |
| !!! | TTTAGTTTTGGCTCGCTTTT+TGG | + | chr6_3:21654488-21654507 | Msa0944680:intron | 35.0% |
| !! | TTAGGCAGTACATTTGGTTT+TGG | + | chr6_3:21654518-21654537 | Msa0944680:intron | 35.0% |
| ATGCGAAAAGCAAATACGAA+TGG | - | chr6_3:21654544-21654563 | None:intergenic | 35.0% | |
| TTTACTGCATGTAAGTCGTA+AGG | - | chr6_3:21654590-21654609 | None:intergenic | 35.0% | |
| GATGGAATAACTGAGATACA+TGG | + | chr6_3:21654678-21654697 | Msa0944680:intron | 35.0% | |
| AATAGTTGATCCTGGTATCT+CGG | - | chr6_3:21654753-21654772 | None:intergenic | 35.0% | |
| TACGCAAGCATAAGATAAAG+TGG | + | chr6_3:21654974-21654993 | Msa0944680:intron | 35.0% | |
| TGTTATTGGAGTCAACATGT+TGG | - | chr6_3:21655482-21655501 | None:intergenic | 35.0% | |
| ! | CCATTTTCTCGGATTGTTAT+TGG | - | chr6_3:21655496-21655515 | None:intergenic | 35.0% |
| CCAATAACAATCCGAGAAAA+TGG | + | chr6_3:21655493-21655512 | Msa0944680:intron | 35.0% | |
| TGTAACCTATGTGTAAGTGT+CGG | + | chr6_3:21655526-21655545 | Msa0944680:intron | 35.0% | |
| !!! | TGCTACATAGGTTTTGAGTA+AGG | + | chr6_3:21655587-21655606 | Msa0944680:intron | 35.0% |
| !!! | TACATAGGTTTTGAGTAAGG+AGG | + | chr6_3:21655590-21655609 | Msa0944680:intron | 35.0% |
| ACCACTAGACACAAATCAAT+AGG | - | chr6_3:21655616-21655635 | None:intergenic | 35.0% | |
| !!! | TATTTTAGCCTTTATTCGGG+GGG | - | chr6_3:21655671-21655690 | None:intergenic | 35.0% |
| !!! | CTATTTTAGCCTTTATTCGG+GGG | - | chr6_3:21655672-21655691 | None:intergenic | 35.0% |
| !!! | CCTATTTTAGCCTTTATTCG+GGG | - | chr6_3:21655673-21655692 | None:intergenic | 35.0% |
| !!! | CCCTATTTTAGCCTTTATTC+GGG | - | chr6_3:21655674-21655693 | None:intergenic | 35.0% |
| CCCGAATAAAGGCTAAAATA+GGG | + | chr6_3:21655671-21655690 | Msa0944680:intron | 35.0% | |
| CATTGTAGATTTGTGTCTAG+TGG | + | chr6_3:21655784-21655803 | Msa0944680:intron | 35.0% | |
| AGCATATCAGAAATAGATGG+AGG | - | chr6_3:21655853-21655872 | None:intergenic | 35.0% | |
| !! | TCCATCTATTTCTGATATGC+TGG | + | chr6_3:21655852-21655871 | Msa0944680:intron | 35.0% |
| TCCAGCATATCAGAAATAGA+TGG | - | chr6_3:21655856-21655875 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr6_3:21656114-21656133 | Msa0944680:intron | 35.0% | |
| GCTGTAGGAGGAAAATAAAA+TGG | - | chr6_3:21656790-21656809 | None:intergenic | 35.0% | |
| AATATCTCGTTAACTTACCC+TGG | - | chr6_3:21656885-21656904 | None:intergenic | 35.0% | |
| !! | TGAAGTTGATGGAAATTCTG+TGG | + | chr6_3:21657051-21657070 | Msa0944680:CDS | 35.0% |
| AAAGTCACCTATATTACAGG+GGG | - | chr6_3:21658310-21658329 | None:intergenic | 35.0% | |
| CCAAAAGTCACCTATATTAC+AGG | - | chr6_3:21658307-21658326 | None:intergenic | 35.0% | |
| ! | CCTGTAATATAGGTGACTTT+TGG | + | chr6_3:21657376-21657395 | Msa0944680:intron | 35.0% |
| ! | GAATCTTCATTTTACGAGGA+CGG | - | chr6_3:21658252-21658271 | None:intergenic | 35.0% |
| !!! | TTTTTTTATTGGGGTACACG+TGG | + | chr6_3:21657566-21657585 | Msa0944680:intron | 35.0% |
| !!! | ATTTTTTATTGGGGTACACG+TGG | - | chr6_3:21658121-21658140 | None:intergenic | 35.0% |
| ! | GAATCTTCATTTTACGAGGA+CGG | + | chr6_3:21658252-21658271 | Msa0944680:intron | 35.0% |
| ! | CCTGTAATATAGGTGACTTT+TGG | - | chr6_3:21657376-21657395 | None:intergenic | 35.0% |
| CCAAAAGTCACCTATATTAC+AGG | + | chr6_3:21658307-21658326 | Msa0944680:intron | 35.0% | |
| AAAGTCACCTATATTACAGG+GGG | + | chr6_3:21658310-21658329 | Msa0944680:intron | 35.0% | |
| ! | ACTTTTCCTACAAGGAAACA+GGG | + | chr6_3:21658595-21658614 | Msa0944680:CDS | 35.0% |
| ! | AAGACATGTGTTTTCAATGC+GGG | + | chr6_3:21658650-21658669 | Msa0944680:intron | 35.0% |
| GCAGTGGCTTAATTACATAT+CGG | + | chr6_3:21658789-21658808 | Msa0944680:intron | 35.0% | |
| CAGTGGCTTAATTACATATC+GGG | + | chr6_3:21658790-21658809 | Msa0944680:intron | 35.0% | |
| TACCTGGTGTTTGTTTGTAT+CGG | + | chr6_3:21658933-21658952 | Msa0944680:intron | 35.0% | |
| AATGTCTTAAAGCAGAGACA+CGG | - | chr6_3:21659129-21659148 | None:intergenic | 35.0% | |
| TGAGATGATTCCAAGAACTT+TGG | + | chr6_3:21659228-21659247 | Msa0944680:CDS | 35.0% | |
| CTTTATGCAGAACATGCTAA+TGG | + | chr6_3:21659292-21659311 | Msa0944680:CDS | 35.0% | |
| GCTAATGGAAATACCAAAGT+TGG | + | chr6_3:21659307-21659326 | Msa0944680:CDS | 35.0% | |
| !! | TACCAAAGTTGGCATTGATT+TGG | + | chr6_3:21659318-21659337 | Msa0944680:CDS | 35.0% |
| TTCCAAATCAATGCCAACTT+TGG | - | chr6_3:21659323-21659342 | None:intergenic | 35.0% | |
| ! | TAACATTGTCTTTTCTGCTC+AGG | + | chr6_3:21659535-21659554 | Msa0944680:intron | 35.0% |
| ! | CTTAAGAAAAAGGGCTTTGA+AGG | - | chr6_3:21659649-21659668 | None:intergenic | 35.0% |
| ! | TAATCGTAGAATGGCGATTT+TGG | - | chr6_3:21659751-21659770 | None:intergenic | 35.0% |
| TGTCGGAAATAATCGTAGAA+TGG | - | chr6_3:21659760-21659779 | None:intergenic | 35.0% | |
| !! | ATTTCATCCCTCTTTTTGAG+GGG | + | chr6_3:21660032-21660051 | Msa0944680:three_prime_UTR | 35.0% |
| AGCTATTGACGAAAGTGAGA+GGG | - | chr6_3:21652078-21652097 | None:intergenic | 40.0% | |
| AAGCTATTGACGAAAGTGAG+AGG | - | chr6_3:21652079-21652098 | None:intergenic | 40.0% | |
| TCTTCCCACAAAATGGCATA+CGG | + | chr6_3:21652206-21652225 | Msa0944680:exon | 40.0% | |
| !!! | CATTCCGTATGCCATTTTGT+GGG | - | chr6_3:21652213-21652232 | None:intergenic | 40.0% |
| ACCATCACTAGAACTTCTCT+TGG | + | chr6_3:21652320-21652339 | Msa0944680:CDS | 40.0% | |
| GATTGGAGAATGAACTGGTT+TGG | + | chr6_3:21652998-21653017 | Msa0944680:intron | 40.0% | |
| !! | GAGAATGAACTGGTTTGGTT+TGG | + | chr6_3:21653003-21653022 | Msa0944680:intron | 40.0% |
| AAAACCAAAATCTTGGCAGC+AGG | - | chr6_3:21653169-21653188 | None:intergenic | 40.0% | |
| !!! | TGCTGCCAAGATTTTGGTTT+TGG | + | chr6_3:21653168-21653187 | Msa0944680:CDS | 40.0% |
| AAGGCTCAACAAGAGGAAAT+TGG | + | chr6_3:21653196-21653215 | Msa0944680:CDS | 40.0% | |
| AGGCTCAACAAGAGGAAATT+GGG | + | chr6_3:21653197-21653216 | Msa0944680:CDS | 40.0% | |
| ACCCATCCTAATAAGTTCCT+CGG | - | chr6_3:21653272-21653291 | None:intergenic | 40.0% | |
| TATCCAATGATGATCTCGCT+TGG | - | chr6_3:21653301-21653320 | None:intergenic | 40.0% | |
| !!! | GCGACCAATGTTTTAAAACC+TGG | + | chr6_3:21653380-21653399 | Msa0944680:intron | 40.0% |
| GAATCAACTGAACCACGATT+TGG | - | chr6_3:21653431-21653450 | None:intergenic | 40.0% | |
| ! | CGTGGTTCAGTTGATTCAAT+CGG | + | chr6_3:21653434-21653453 | Msa0944680:intron | 40.0% |
| ! | ATCGGTTCAACCATTTGAAC+TGG | + | chr6_3:21653452-21653471 | Msa0944680:intron | 40.0% |
| ! | AAAAACAGGTTGGATCACCT+TGG | + | chr6_3:21653527-21653546 | Msa0944680:intron | 40.0% |
| ACAATCAGGATCAAACTACC+GGG | + | chr6_3:21653586-21653605 | Msa0944680:intron | 40.0% | |
| GAATATGGATGTGCGTGATA+AGG | + | chr6_3:21653743-21653762 | Msa0944680:CDS | 40.0% | |
| TAGCAAGCAATTTGGTCAAG+AGG | + | chr6_3:21653800-21653819 | Msa0944680:CDS | 40.0% | |
| ATCAGCAATAAGTGAGCAGA+GGG | - | chr6_3:21653829-21653848 | None:intergenic | 40.0% | |
| ! | TGTTCGTGTTGCAAAGCTTT+TGG | + | chr6_3:21653996-21654015 | Msa0944680:CDS | 40.0% |
| ! | GTTCGTGTTGCAAAGCTTTT+GGG | + | chr6_3:21653997-21654016 | Msa0944680:CDS | 40.0% |
| ACATAACAGTGCAGTTGTTC+CGG | + | chr6_3:21654029-21654048 | Msa0944680:CDS | 40.0% | |
| TCAGTTCTCAAAACCATTCC+CGG | - | chr6_3:21654051-21654070 | None:intergenic | 40.0% | |
| !!! | GTTTTGAGAACTGATGCTGT+TGG | + | chr6_3:21654057-21654076 | Msa0944680:CDS | 40.0% |
| GCAATCATGAGATCATAGCT+TGG | - | chr6_3:21654153-21654172 | None:intergenic | 40.0% | |
| GTCACTGACGTTACTGATAT+AGG | - | chr6_3:21654380-21654399 | None:intergenic | 40.0% | |
| ! | TAAGTCGTAAGGCGTTAGAT+GGG | - | chr6_3:21654579-21654598 | None:intergenic | 40.0% |
| AGTGAGCCAAGTAGATAAGA+TGG | + | chr6_3:21654660-21654679 | Msa0944680:intron | 40.0% | |
| GGAATAACTGAGATACATGG+TGG | + | chr6_3:21654681-21654700 | Msa0944680:intron | 40.0% | |
| GATTGAATAACCGAGATACC+AGG | + | chr6_3:21654740-21654759 | Msa0944680:intron | 40.0% | |
| CAAATTGATGTGTGGAGTTG+TGG | + | chr6_3:21654777-21654796 | Msa0944680:intron | 40.0% | |
| GCAAGCATAAGATAAAGTGG+TGG | + | chr6_3:21654977-21654996 | Msa0944680:intron | 40.0% | |
| ! | TTTAAGGTTGCTGTGTTTGC+TGG | + | chr6_3:21655277-21655296 | Msa0944680:intron | 40.0% |
| ACCTCTGCAACTGAAACTAA+AGG | + | chr6_3:21655310-21655329 | Msa0944680:CDS | 40.0% | |
| ! | TCCTTTAGTTTCAGTTGCAG+AGG | - | chr6_3:21655314-21655333 | None:intergenic | 40.0% |
| !! | GTCAATTTGCTATACCTGCT+CGG | - | chr6_3:21655356-21655375 | None:intergenic | 40.0% |
| !! | GCCTATTGATTTGTGTCTAG+TGG | + | chr6_3:21655612-21655631 | Msa0944680:intron | 40.0% |
| CCCCGAATAAAGGCTAAAAT+AGG | + | chr6_3:21655670-21655689 | Msa0944680:intron | 40.0% | |
| ! | TGATAGACAAGTTTGGGATC+AGG | - | chr6_3:21655717-21655736 | None:intergenic | 40.0% |
| CTGCTAATATCTTCCAGACA+AGG | - | chr6_3:21655756-21655775 | None:intergenic | 40.0% | |
| CTTGTCTGGAAGATATTAGC+AGG | + | chr6_3:21655754-21655773 | Msa0944680:intron | 40.0% | |
| TGTGTCTAGTGGTATAAGCA+TGG | + | chr6_3:21655795-21655814 | Msa0944680:intron | 40.0% | |
| GGTATAAGCATGGAGTTTCT+CGG | + | chr6_3:21655805-21655824 | Msa0944680:intron | 40.0% | |
| TGATATGCTGGACATTTCTG+TGG | + | chr6_3:21655864-21655883 | Msa0944680:intron | 40.0% | |
| !! | ACCTTCATTGTGTTGGCTTT+AGG | + | chr6_3:21656052-21656071 | Msa0944680:intron | 40.0% |
| !! | CCTTCATTGTGTTGGCTTTA+GGG | + | chr6_3:21656053-21656072 | Msa0944680:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTAG+GGG | + | chr6_3:21656054-21656073 | Msa0944680:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTAGG+GGG | + | chr6_3:21656055-21656074 | Msa0944680:intron | 40.0% |
| CCAACTCATCCTTACAAAAC+CGG | - | chr6_3:21656158-21656177 | None:intergenic | 40.0% | |
| AGCTCCATTAGTACAGTATC+AGG | - | chr6_3:21656248-21656267 | None:intergenic | 40.0% | |
| AACTGAAGAGGCTAAAGTAG+AGG | + | chr6_3:21656398-21656417 | Msa0944680:CDS | 40.0% | |
| TAAAGTAGAGGAGCTCATCA+AGG | + | chr6_3:21656410-21656429 | Msa0944680:CDS | 40.0% | |
| TATTCCTGCATGCAGACTTA+TGG | + | chr6_3:21656645-21656664 | Msa0944680:intron | 40.0% | |
| AAAACCATAAGTCTGCATGC+AGG | - | chr6_3:21656652-21656671 | None:intergenic | 40.0% | |
| TGGTTAGTGTTGTGCTTCTT+TGG | + | chr6_3:21656731-21656750 | Msa0944680:intron | 40.0% | |
| AATCCAAGATCATCTGGGTT+TGG | - | chr6_3:21656827-21656846 | None:intergenic | 40.0% | |
| TCTGTTTCAGTCGAGGAAAT+TGG | + | chr6_3:21656854-21656873 | Msa0944680:CDS | 40.0% | |
| CAGCTCTTTCAAGATCATCT+AGG | - | chr6_3:21657111-21657130 | None:intergenic | 40.0% | |
| ! | CTTTTACCCCCCTGTAATAT+AGG | + | chr6_3:21657366-21657385 | Msa0944680:intron | 40.0% |
| AAGTCACCTATATTACAGGG+GGG | - | chr6_3:21658311-21658330 | None:intergenic | 40.0% | |
| AAGTCACCTATATTACAGGG+GGG | + | chr6_3:21658311-21658330 | Msa0944680:intron | 40.0% | |
| ! | CTTTTACCCCCCTGTAATAT+AGG | - | chr6_3:21657366-21657385 | None:intergenic | 40.0% |
| ! | GGTGAAAGACTTTTCCTACA+AGG | + | chr6_3:21658587-21658606 | Msa0944680:CDS | 40.0% |
| ! | GACTTTTCCTACAAGGAAAC+AGG | + | chr6_3:21658594-21658613 | Msa0944680:CDS | 40.0% |
| TACATCTCCATCTGTGAGTA+TGG | + | chr6_3:21658765-21658784 | Msa0944680:intron | 40.0% | |
| ACATCTCCATCTGTGAGTAT+GGG | + | chr6_3:21658766-21658785 | Msa0944680:intron | 40.0% | |
| !! | TGAAGTGTCGATGCTACATA+GGG | - | chr6_3:21658832-21658851 | None:intergenic | 40.0% |
| ACCTGGTGTTTGTTTGTATC+GGG | + | chr6_3:21658934-21658953 | Msa0944680:intron | 40.0% | |
| AATCTCCATTGCATTTAGCC+CGG | - | chr6_3:21659263-21659282 | None:intergenic | 40.0% | |
| ! | TTTGGAACCTGGTGTTTGTA+AGG | + | chr6_3:21659336-21659355 | Msa0944680:CDS | 40.0% |
| TAAGGATGTCTCAACCATGA+GGG | + | chr6_3:21659354-21659373 | Msa0944680:CDS | 40.0% | |
| !! | AAGAAAAAGGGCTTTGAAGG+TGG | - | chr6_3:21659646-21659665 | None:intergenic | 40.0% |
| ATTATGTCAAAACCTGCTGG+TGG | + | chr6_3:21659889-21659908 | Msa0944680:CDS | 40.0% | |
| CTGAATACCCCTCAAAAAGA+GGG | - | chr6_3:21660042-21660061 | None:intergenic | 40.0% | |
| ACTGAATACCCCTCAAAAAG+AGG | - | chr6_3:21660043-21660062 | None:intergenic | 40.0% | |
| GACGAAAGTGAGAGGGAAAA+GGG | - | chr6_3:21652071-21652090 | None:intergenic | 45.0% | |
| TGACGAAAGTGAGAGGGAAA+AGG | - | chr6_3:21652072-21652091 | None:intergenic | 45.0% | |
| !!! | GCATTCCGTATGCCATTTTG+TGG | - | chr6_3:21652214-21652233 | None:intergenic | 45.0% |
| ATGCAATCGATGCTGAAGGA+AGG | + | chr6_3:21652230-21652249 | Msa0944680:CDS | 45.0% | |
| GAAGGTCACAAGCATCTATC+TGG | + | chr6_3:21652248-21652267 | Msa0944680:CDS | 45.0% | |
| ! | GCCAAGAGAAGTTCTAGTGA+TGG | - | chr6_3:21652324-21652343 | None:intergenic | 45.0% |
| AGAACTTCTCTTGGCCCTAA+TGG | + | chr6_3:21652329-21652348 | Msa0944680:CDS | 45.0% | |
| ! | GTGTTTTTCACTGAACAGGG+TGG | + | chr6_3:21652887-21652906 | Msa0944680:intron | 45.0% |
| GGCTCAACAAGAGGAAATTG+GGG | + | chr6_3:21653198-21653217 | Msa0944680:CDS | 45.0% | |
| CAACAAGAGGAAATTGGGGA+TGG | + | chr6_3:21653202-21653221 | Msa0944680:CDS | 45.0% | |
| !! | AAGGTGCCGAGGAACTTATT+AGG | + | chr6_3:21653263-21653282 | Msa0944680:CDS | 45.0% |
| TGCCGAGGAACTTATTAGGA+TGG | + | chr6_3:21653267-21653286 | Msa0944680:CDS | 45.0% | |
| GCCGAGGAACTTATTAGGAT+GGG | + | chr6_3:21653268-21653287 | Msa0944680:CDS | 45.0% | |
| CATCCAAGCGAGATCATCAT+TGG | + | chr6_3:21653295-21653314 | Msa0944680:intron | 45.0% | |
| ! | TCAACTGAACCACGATTTGG+AGG | - | chr6_3:21653428-21653447 | None:intergenic | 45.0% |
| TTGGATCACCTTGGTTCAAC+CGG | + | chr6_3:21653536-21653555 | Msa0944680:intron | 45.0% | |
| AGGATCAAACTACCGGGAAA+TGG | + | chr6_3:21653592-21653611 | Msa0944680:intron | 45.0% | |
| GGATCAAACTACCGGGAAAT+GGG | + | chr6_3:21653593-21653612 | Msa0944680:intron | 45.0% | |
| GTAACTACTAGCCCATTTCC+CGG | - | chr6_3:21653607-21653626 | None:intergenic | 45.0% | |
| TTAGATGAACTGGTGGAGGA+AGG | + | chr6_3:21653714-21653733 | Msa0944680:CDS | 45.0% | |
| GCAGTTGCTAGCAAGCAATT+TGG | + | chr6_3:21653792-21653811 | Msa0944680:CDS | 45.0% | |
| CATCAGCAATAAGTGAGCAG+AGG | - | chr6_3:21653830-21653849 | None:intergenic | 45.0% | |
| !! | GTGTTGCAAAGCTTTTGGGA+GGG | + | chr6_3:21654001-21654020 | Msa0944680:CDS | 45.0% |
| !! | TGTTGCAAAGCTTTTGGGAG+GGG | + | chr6_3:21654002-21654021 | Msa0944680:CDS | 45.0% |
| CATAACAGTGCAGTTGTTCC+GGG | + | chr6_3:21654030-21654049 | Msa0944680:CDS | 45.0% | |
| TCTCATGATTGCTTGCACTG+TGG | + | chr6_3:21654161-21654180 | Msa0944680:intron | 45.0% | |
| ! | TAAGGCGTTAGATGGGTCAT+GGG | - | chr6_3:21654572-21654591 | None:intergenic | 45.0% |
| ! | GTAAGTCGTAAGGCGTTAGA+TGG | - | chr6_3:21654580-21654599 | None:intergenic | 45.0% |
| ! | ATACTTACTTGGTGGCCGTT+TGG | - | chr6_3:21655058-21655077 | None:intergenic | 45.0% |
| !! | CAACATGTTGGTGTCGTGTT+TGG | - | chr6_3:21655470-21655489 | None:intergenic | 45.0% |
| TGACACCGACACTTACACAT+AGG | - | chr6_3:21655534-21655553 | None:intergenic | 45.0% | |
| !! | TAAGTGTCGGTGTCAGACAA+TGG | + | chr6_3:21655539-21655558 | Msa0944680:intron | 45.0% |
| ACGCCTTCAATTCGAAGTGT+CGG | + | chr6_3:21655564-21655583 | Msa0944680:intron | 45.0% | |
| AAATTCCGCCGCCTTTATTG+CGG | + | chr6_3:21655972-21655991 | Msa0944680:intron | 45.0% | |
| CAAACCAAAGGCCGCAATTA+AGG | - | chr6_3:21656012-21656031 | None:intergenic | 45.0% | |
| CTGCAATGAAGGCAAACCAA+AGG | - | chr6_3:21656024-21656043 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr6_3:21656047-21656066 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | + | chr6_3:21656045-21656064 | Msa0944680:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr6_3:21656050-21656069 | None:intergenic | 45.0% |
| CCCTAAAGCCAACACAATGA+AGG | - | chr6_3:21656056-21656075 | None:intergenic | 45.0% | |
| !! | TCATTGTGTTGGCTTTAGGG+GGG | + | chr6_3:21656056-21656075 | Msa0944680:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | + | chr6_3:21656085-21656104 | Msa0944680:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | - | chr6_3:21656092-21656111 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | - | chr6_3:21656093-21656112 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGTTCGTA+AGG | - | chr6_3:21656149-21656168 | None:intergenic | 45.0% |
| !! | CCTTACGAACCGGTTTTGTA+AGG | + | chr6_3:21656146-21656165 | Msa0944680:intron | 45.0% |
| !! | CCGGTTTTGTAAGGATGAGT+TGG | + | chr6_3:21656155-21656174 | Msa0944680:intron | 45.0% |
| ATGCAAAGCCATCTCTCCTA+CGG | - | chr6_3:21656478-21656497 | None:intergenic | 45.0% | |
| TTGCGACAGAACCAGTTGTT+CGG | - | chr6_3:21656711-21656730 | None:intergenic | 45.0% | |
| !! | AACAACTGGTTCTGTCGCAA+TGG | + | chr6_3:21656711-21656730 | Msa0944680:CDS | 45.0% |
| GTTGGCAAAGTTTCAGCTGT+AGG | - | chr6_3:21656805-21656824 | None:intergenic | 45.0% | |
| ! | CAAGATCATCTGGGTTTGGT+TGG | - | chr6_3:21656823-21656842 | None:intergenic | 45.0% |
| CAACCAAACCCAGATGATCT+TGG | + | chr6_3:21656821-21656840 | Msa0944680:CDS | 45.0% | |
| CCGCAAATCCAAGATCATCT+GGG | - | chr6_3:21656832-21656851 | None:intergenic | 45.0% | |
| CCCAGATGATCTTGGATTTG+CGG | + | chr6_3:21656829-21656848 | Msa0944680:CDS | 45.0% | |
| TCCGCAAATCCAAGATCATC+TGG | - | chr6_3:21656833-21656852 | None:intergenic | 45.0% | |
| GTTTCAGTCGAGGAAATTGG+TGG | + | chr6_3:21656857-21656876 | Msa0944680:CDS | 45.0% | |
| ACTTCCTCGTAAAACCACAG+TGG | - | chr6_3:21657077-21657096 | None:intergenic | 45.0% | |
| CTTGAAAGAGCTGTTGACGA+TGG | + | chr6_3:21657118-21657137 | Msa0944680:CDS | 45.0% | |
| CGATGGAGTGAACACTTACA+AGG | + | chr6_3:21657135-21657154 | Msa0944680:CDS | 45.0% | |
| !! | GAGATTCTGCTGACTCATTG+GGG | - | chr6_3:21658211-21658230 | None:intergenic | 45.0% |
| !! | GGAGATTCTGCTGACTCATT+GGG | - | chr6_3:21658210-21658229 | None:intergenic | 45.0% |
| !! | AGGAGATTCTGCTGACTCAT+TGG | - | chr6_3:21658209-21658228 | None:intergenic | 45.0% |
| AGTCAGCAGAATCTCCTATG+TGG | + | chr6_3:21657480-21657499 | Msa0944680:intron | 45.0% | |
| AGTCAGCAGAATCTCCTATG+TGG | - | chr6_3:21657480-21657499 | None:intergenic | 45.0% | |
| !! | AGGAGATTCTGCTGACTCAT+TGG | + | chr6_3:21658209-21658228 | Msa0944680:intron | 45.0% |
| !! | GGAGATTCTGCTGACTCATT+GGG | + | chr6_3:21658210-21658229 | Msa0944680:intron | 45.0% |
| !! | GAGATTCTGCTGACTCATTG+GGG | + | chr6_3:21658211-21658230 | Msa0944680:intron | 45.0% |
| TTATTTGTCAGGCCATGTGC+AGG | + | chr6_3:21658511-21658530 | Msa0944680:intron | 45.0% | |
| TATTTGTCAGGCCATGTGCA+GGG | + | chr6_3:21658512-21658531 | Msa0944680:intron | 45.0% | |
| AACGTACCCTGTTTCCTTGT+AGG | - | chr6_3:21658604-21658623 | None:intergenic | 45.0% | |
| CATCTCCATCTGTGAGTATG+GGG | + | chr6_3:21658767-21658786 | Msa0944680:intron | 45.0% | |
| !! | GTGAAGTGTCGATGCTACAT+AGG | - | chr6_3:21658833-21658852 | None:intergenic | 45.0% |
| CCTGGTGTTTGTTTGTATCG+GGG | + | chr6_3:21658935-21658954 | Msa0944680:intron | 45.0% | |
| CTGGTGTTTGTTTGTATCGG+GGG | + | chr6_3:21658936-21658955 | Msa0944680:intron | 45.0% | |
| !! | GTTGGCATTGATTTGGAACC+TGG | + | chr6_3:21659325-21659344 | Msa0944680:CDS | 45.0% |
| GAGACATCCTTACAAACACC+AGG | - | chr6_3:21659346-21659365 | None:intergenic | 45.0% | |
| GTAAGGATGTCTCAACCATG+AGG | + | chr6_3:21659353-21659372 | Msa0944680:CDS | 45.0% | |
| !! | TACCTGATCGACTCGTAGTA+CGG | - | chr6_3:21659598-21659617 | None:intergenic | 45.0% |
| !! | AACTAGTCTTCATCCATGCC+AGG | - | chr6_3:21659937-21659956 | None:intergenic | 45.0% |
| AGGTTTGTGGGACATGAGTA+AGG | - | chr6_3:21659968-21659987 | None:intergenic | 45.0% | |
| !!! | TTTTAATCATAATTTTATAT+AGG | + | chr6_3:21654840-21654859 | Msa0944680:intron | 5.0% |
| !!! | TATTTTTTATTTTTTTATTG+GGG | + | chr6_3:21657557-21657576 | Msa0944680:intron | 5.0% |
| !! | ATAAAAAAATTAAAAAATTC+TGG | + | chr6_3:21657677-21657696 | Msa0944680:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr6_3:21657767-21657786 | Msa0944680:intron | 5.0% |
| !! | AAAAAAAATTTAAAAAATTC+TGG | - | chr6_3:21658030-21658049 | None:intergenic | 5.0% |
| !! | AAAAAATAAATAAAAAATTC+TGG | - | chr6_3:21658070-21658089 | None:intergenic | 5.0% |
| !!! | TTATTTTTTATTTTTTATTG+GGG | - | chr6_3:21658130-21658149 | None:intergenic | 5.0% |
| !!! | AATTAAATTCAAAATTTTTA+AGG | - | chr6_3:21659991-21660010 | None:intergenic | 5.0% |
| CGGAATGCAATCGATGCTGA+AGG | + | chr6_3:21652226-21652245 | Msa0944680:CDS | 50.0% | |
| ! | GCATCCTGCTGCCAAGATTT+TGG | + | chr6_3:21653162-21653181 | Msa0944680:CDS | 50.0% |
| GGCTAGTAAGGCTCAACAAG+AGG | + | chr6_3:21653189-21653208 | Msa0944680:CDS | 50.0% | |
| ! | TTTGCTGGGGAGCTTTTGCA+AGG | + | chr6_3:21653244-21653263 | Msa0944680:CDS | 50.0% |
| ACCTGGAATGGAGATTGGAC+TGG | + | chr6_3:21653397-21653416 | Msa0944680:intron | 50.0% | |
| ACCAGTCCAATCTCCATTCC+AGG | - | chr6_3:21653401-21653420 | None:intergenic | 50.0% | |
| GGGTTAAACCGGTTGAACCA+AGG | - | chr6_3:21653547-21653566 | None:intergenic | 50.0% | |
| GGAGGAAGGCTCAGAGAATA+TGG | + | chr6_3:21653728-21653747 | Msa0944680:CDS | 50.0% | |
| !!! | CAGGGTTTTTTGGGCACACT+TGG | - | chr6_3:21653957-21653976 | None:intergenic | 50.0% |
| ! | CGTGTTGCAAAGCTTTTGGG+AGG | + | chr6_3:21654000-21654019 | Msa0944680:CDS | 50.0% |
| !! | GTTGCAAAGCTTTTGGGAGG+GGG | + | chr6_3:21654003-21654022 | Msa0944680:CDS | 50.0% |
| ! | GTAAGGCGTTAGATGGGTCA+TGG | - | chr6_3:21654573-21654592 | None:intergenic | 50.0% |
| ! | AAGGTTGCTGTGTTTGCTGG+AGG | + | chr6_3:21655280-21655299 | Msa0944680:intron | 50.0% |
| TCTCATACATTCAGCCGAGC+AGG | + | chr6_3:21655339-21655358 | Msa0944680:CDS | 50.0% | |
| !! | GTGTTTGGTGTCTGTGTCAG+TGG | - | chr6_3:21655455-21655474 | None:intergenic | 50.0% |
| ! | GCACCGACACTTCGAATTGA+AGG | - | chr6_3:21655570-21655589 | None:intergenic | 50.0% |
| !! | TCGAAGTGTCGGTGCTACAT+AGG | + | chr6_3:21655575-21655594 | Msa0944680:intron | 50.0% |
| TAGCCTTTATTCGGGGGGTA+GGG | - | chr6_3:21655666-21655685 | None:intergenic | 50.0% | |
| ! | TTAGCCTTTATTCGGGGGGT+AGG | - | chr6_3:21655667-21655686 | None:intergenic | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr6_3:21656076-21656095 | Msa0944680:intron | 50.0% |
| !! | CAAAACCGGTTCGTAAGGTG+AGG | - | chr6_3:21656144-21656163 | None:intergenic | 50.0% |
| !! | ATCAAGGCAGTAGCGGATTC+TGG | + | chr6_3:21656426-21656445 | Msa0944680:CDS | 50.0% |
| GGTGCGAAAGTGATTGTCAG+TGG | + | chr6_3:21656447-21656466 | Msa0944680:CDS | 50.0% | |
| GCGAAAGTGATTGTCAGTGG+TGG | + | chr6_3:21656450-21656469 | Msa0944680:CDS | 50.0% | |
| !!! | CGTCGATTTTGCCGAACAAC+TGG | + | chr6_3:21656697-21656716 | Msa0944680:CDS | 50.0% |
| GGCAAAGTTTCAGCTGTAGG+AGG | - | chr6_3:21656802-21656821 | None:intergenic | 50.0% | |
| TGCGGATTCTGTTTCAGTCG+AGG | + | chr6_3:21656847-21656866 | Msa0944680:CDS | 50.0% | |
| TGGAAATTCTGTGGCCACTG+TGG | + | chr6_3:21657060-21657079 | Msa0944680:CDS | 50.0% | |
| !!! | GACTTTTGGTTTTGCCCCCT+AGG | + | chr6_3:21657390-21657409 | Msa0944680:intron | 50.0% |
| !!! | GACTTTTGGTTTTGCCCCCT+AGG | - | chr6_3:21657390-21657409 | None:intergenic | 50.0% |
| ATTTCAGTTGCAGCAGCTCC+AGG | - | chr6_3:21658552-21658571 | None:intergenic | 50.0% | |
| TGACAGTGCATTGTCGTACC+TGG | + | chr6_3:21658917-21658936 | Msa0944680:intron | 50.0% | |
| CCCCGATACAAACAAACACC+AGG | - | chr6_3:21658938-21658957 | None:intergenic | 50.0% | |
| GCATTCTCGGCCAAAGTTCT+TGG | - | chr6_3:21659241-21659260 | None:intergenic | 50.0% | |
| AGAACTTTGGCCGAGAATGC+CGG | + | chr6_3:21659241-21659260 | Msa0944680:CDS | 50.0% | |
| TGCATTTAGCCCGGCATTCT+CGG | - | chr6_3:21659254-21659273 | None:intergenic | 50.0% | |
| GAATGCCGGGCTAAATGCAA+TGG | + | chr6_3:21659255-21659274 | Msa0944680:CDS | 50.0% | |
| ATGTCTCAACCATGAGGGTC+TGG | + | chr6_3:21659359-21659378 | Msa0944680:CDS | 50.0% | |
| TGTCTCAACCATGAGGGTCT+GGG | + | chr6_3:21659360-21659379 | Msa0944680:CDS | 50.0% | |
| ATGTAGATCCCAGACCCTCA+TGG | - | chr6_3:21659371-21659390 | None:intergenic | 50.0% | |
| CTGGTGACTCCTCCAAATCG+TGG | + | chr6_3:21653416-21653435 | Msa0944680:intron | 55.0% | |
| CAGTGCAGTTGTTCCGGGAA+TGG | + | chr6_3:21654035-21654054 | Msa0944680:CDS | 55.0% | |
| CTTTATTCGGGGGGTAGGGT+GGG | - | chr6_3:21655662-21655681 | None:intergenic | 55.0% | |
| GCAATTAAGGCGACTAGGGG+CGG | - | chr6_3:21655999-21656018 | None:intergenic | 55.0% | |
| GCCCCTAGTCGCCTTAATTG+CGG | + | chr6_3:21655998-21656017 | Msa0944680:intron | 55.0% | |
| GCCGCAATTAAGGCGACTAG+GGG | - | chr6_3:21656002-21656021 | None:intergenic | 55.0% | |
| GGCCGCAATTAAGGCGACTA+GGG | - | chr6_3:21656003-21656022 | None:intergenic | 55.0% | |
| AGGCCGCAATTAAGGCGACT+AGG | - | chr6_3:21656004-21656023 | None:intergenic | 55.0% | |
| GTCGCCTTAATTGCGGCCTT+TGG | + | chr6_3:21656005-21656024 | Msa0944680:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr6_3:21656035-21656054 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTAGGGGGG+TGG | + | chr6_3:21656059-21656078 | Msa0944680:intron | 55.0% |
| GCACTCCTCACCTTACGAAC+CGG | + | chr6_3:21656136-21656155 | Msa0944680:intron | 55.0% | |
| GGAGCTCATCAAGGCAGTAG+CGG | + | chr6_3:21656419-21656438 | Msa0944680:CDS | 55.0% | |
| ! | ATTGTCAGTGGTGGAGCCGT+AGG | + | chr6_3:21656459-21656478 | Msa0944680:CDS | 55.0% |
| !! | TCGAGGAAATTGGTGGTGCC+AGG | + | chr6_3:21656864-21656883 | Msa0944680:CDS | 55.0% |
| !! | CGAGGAAATTGGTGGTGCCA+GGG | + | chr6_3:21656865-21656884 | Msa0944680:CDS | 55.0% |
| !! | GTGGCCACTGTGGTTTTACG+AGG | + | chr6_3:21657070-21657089 | Msa0944680:CDS | 55.0% |
| !! | TGCTGACTCATTGGGGTCAG+GGG | - | chr6_3:21658218-21658237 | None:intergenic | 55.0% |
| !! | CTGCTGACTCATTGGGGTCA+GGG | - | chr6_3:21658217-21658236 | None:intergenic | 55.0% |
| !! | TCTGCTGACTCATTGGGGTC+AGG | - | chr6_3:21658216-21658235 | None:intergenic | 55.0% |
| GTCAGCAGATTCTGCTGACG+TGG | + | chr6_3:21657511-21657530 | Msa0944680:intron | 55.0% | |
| GTCAGCAGATTCTGCTGACG+TGG | - | chr6_3:21657511-21657530 | None:intergenic | 55.0% | |
| !! | TCTGCTGACTCATTGGGGTC+AGG | + | chr6_3:21658216-21658235 | Msa0944680:intron | 55.0% |
| !! | CTGCTGACTCATTGGGGTCA+GGG | + | chr6_3:21658217-21658236 | Msa0944680:intron | 55.0% |
| !! | TGCTGACTCATTGGGGTCAG+GGG | + | chr6_3:21658218-21658237 | Msa0944680:intron | 55.0% |
| AATGCGGCTATCCCTGCACA+TGG | - | chr6_3:21658526-21658545 | None:intergenic | 55.0% | |
| AGGGATAGCCGCATTGTACC+TGG | + | chr6_3:21658531-21658550 | Msa0944680:CDS | 55.0% | |
| CAGCAGCTCCAGGTACAATG+CGG | - | chr6_3:21658542-21658561 | None:intergenic | 55.0% | |
| CACTGCCCCATACTCACAGA+TGG | - | chr6_3:21658775-21658794 | None:intergenic | 55.0% | |
| CATCTGTGAGTATGGGGCAG+TGG | + | chr6_3:21658773-21658792 | Msa0944680:intron | 55.0% | |
| GAACTTTGGCCGAGAATGCC+GGG | + | chr6_3:21659242-21659261 | Msa0944680:CDS | 55.0% | |
| CACCGTACTACGAGTCGATC+AGG | + | chr6_3:21659593-21659612 | Msa0944680:CDS | 55.0% | |
| !! | GGGCTTTGAAGGTGGCAATC+AGG | - | chr6_3:21659638-21659657 | None:intergenic | 55.0% |
| !! | GAGCAGGTTGGTCTCTCCTT+GGG | - | chr6_3:21659915-21659934 | None:intergenic | 55.0% |
| TCTTCATCCATGCCAGGAGC+AGG | - | chr6_3:21659931-21659950 | None:intergenic | 55.0% | |
| !!! | GGAGCTTTTGCAAGGTGCCG+AGG | + | chr6_3:21653252-21653271 | Msa0944680:CDS | 60.0% |
| CCTTTATTCGGGGGGTAGGG+TGG | - | chr6_3:21655663-21655682 | None:intergenic | 60.0% | |
| CCACCCTACCCCCCGAATAA+AGG | + | chr6_3:21655660-21655679 | Msa0944680:intron | 60.0% | |
| CTAGGGGCGGACCGCAATAA+AGG | - | chr6_3:21655986-21656005 | None:intergenic | 60.0% | |
| TGGTGGAGCCGTAGGAGAGA+TGG | + | chr6_3:21656467-21656486 | Msa0944680:CDS | 60.0% | |
| ! | GCTGACTCATTGGGGTCAGG+GGG | - | chr6_3:21658219-21658238 | None:intergenic | 60.0% |
| ! | GCTGACTCATTGGGGTCAGG+GGG | + | chr6_3:21658219-21658238 | Msa0944680:intron | 60.0% |
| CAAAACCTGCTGGTGGCCCA+AGG | + | chr6_3:21659896-21659915 | Msa0944680:CDS | 60.0% | |
| !! | GGAGCAGGTTGGTCTCTCCT+TGG | - | chr6_3:21659916-21659935 | None:intergenic | 60.0% |
| AGGAGAGACCAACCTGCTCC+TGG | + | chr6_3:21659916-21659935 | Msa0944680:CDS | 60.0% | |
| AGACCAACCTGCTCCTGGCA+TGG | + | chr6_3:21659921-21659940 | Msa0944680:CDS | 60.0% | |
| CATCCATGCCAGGAGCAGGT+TGG | - | chr6_3:21659927-21659946 | None:intergenic | 60.0% | |
| TTCGGGGGGTAGGGTGGGAT+GGG | - | chr6_3:21655657-21655676 | None:intergenic | 65.0% | |
| ATTCGGGGGGTAGGGTGGGA+TGG | - | chr6_3:21655658-21655677 | None:intergenic | 65.0% | |
| GCGGACCGCAATAAAGGCGG+CGG | - | chr6_3:21655980-21655999 | None:intergenic | 65.0% | |
| GGGGCGGACCGCAATAAAGG+CGG | - | chr6_3:21655983-21656002 | None:intergenic | 65.0% | |
| GCTGACGCAGCGTGCCACAT+AGG | - | chr6_3:21658189-21658208 | None:intergenic | 65.0% | |
| GCTGACGCAGCGTGCCACAT+AGG | + | chr6_3:21658189-21658208 | Msa0944680:intron | 65.0% | |
| TCTCTCCTTGGGCCACCAGC+AGG | - | chr6_3:21659904-21659923 | None:intergenic | 65.0% | |
| TCGGGGGGTAGGGTGGGATG+GGG | - | chr6_3:21655656-21655675 | None:intergenic | 70.0% | |
| GGGGTAGGGTGGGATGGGGG+TGG | - | chr6_3:21655652-21655671 | None:intergenic | 75.0% | |
| CGGGGGGTAGGGTGGGATGG+GGG | - | chr6_3:21655655-21655674 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 21652025 | 21660247 | 21652025 | ID=Msa0944680;Name=Msa0944680 |
| chr6_3 | mRNA | 21652025 | 21660247 | 21652025 | ID=Msa0944680-mRNA-1;Parent=Msa0944680;Name=Msa0944680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=193|0.91|0.84|1|0.91|0.92|13|293|522 |
| chr6_3 | exon | 21652025 | 21652350 | 21652025 | ID=Msa0944680-mRNA-1:exon:6460;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21653077 | 21653289 | 21653077 | ID=Msa0944680-mRNA-1:exon:6461;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21653706 | 21653848 | 21653706 | ID=Msa0944680-mRNA-1:exon:6462;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21653946 | 21654107 | 21653946 | ID=Msa0944680-mRNA-1:exon:6463;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21655283 | 21655360 | 21655283 | ID=Msa0944680-mRNA-1:exon:6464;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21656381 | 21656514 | 21656381 | ID=Msa0944680-mRNA-1:exon:6465;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21656660 | 21656732 | 21656660 | ID=Msa0944680-mRNA-1:exon:6466;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21656809 | 21656886 | 21656809 | ID=Msa0944680-mRNA-1:exon:6467;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21657034 | 21657156 | 21657034 | ID=Msa0944680-mRNA-1:exon:6468;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21658522 | 21658616 | 21658522 | ID=Msa0944680-mRNA-1:exon:6469;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21659189 | 21659398 | 21659189 | ID=Msa0944680-mRNA-1:exon:6470;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21659557 | 21659614 | 21659557 | ID=Msa0944680-mRNA-1:exon:6471;Parent=Msa0944680-mRNA-1 |
| chr6_3 | exon | 21659886 | 21660247 | 21659886 | ID=Msa0944680-mRNA-1:exon:6472;Parent=Msa0944680-mRNA-1 |
| chr6_3 | five_prime_UTR | 21652025 | 21652217 | 21652025 | ID=Msa0944680-mRNA-1:five_prime_utr;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21652218 | 21652350 | 21652218 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21653077 | 21653289 | 21653077 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21653706 | 21653848 | 21653706 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21653946 | 21654107 | 21653946 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21655283 | 21655360 | 21655283 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21656381 | 21656514 | 21656381 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21656660 | 21656732 | 21656660 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21656809 | 21656886 | 21656809 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21657034 | 21657156 | 21657034 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21658522 | 21658616 | 21658522 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21659189 | 21659398 | 21659189 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21659557 | 21659614 | 21659557 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | CDS | 21659886 | 21659954 | 21659886 | ID=Msa0944680-mRNA-1:cds;Parent=Msa0944680-mRNA-1 |
| chr6_3 | three_prime_UTR | 21659955 | 21660247 | 21659955 | ID=Msa0944680-mRNA-1:three_prime_utr;Parent=Msa0944680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
