Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1137970 | XP_003621544.2 | 97.935 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.0 | 1555 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1137970 | sp|Q9FMB4|AUG5_ARATH | 69.987 | 793 | 210 | 6 | 4 | 772 | 6 | 794 | 0.0 | 1114 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1137970 | Q2HSE5 | 97.935 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.0 | 1555 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0061340 | Msa1137970 | 0.827350 | 1.642447e-54 | -8.615850e-47 |
Msa0065680 | Msa1137970 | -0.804001 | 2.663808e-49 | -8.615850e-47 |
Msa0089980 | Msa1137970 | 0.813243 | 2.825359e-51 | -8.615850e-47 |
Msa0090010 | Msa1137970 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
Msa0106620 | Msa1137970 | 0.819788 | 9.662100e-53 | -8.615850e-47 |
Msa0106710 | Msa1137970 | 0.819794 | 9.630139e-53 | -8.615850e-47 |
Msa0607320 | Msa1137970 | 0.817816 | 2.710294e-52 | -8.615850e-47 |
Msa0618950 | Msa1137970 | 0.807754 | 4.331150e-50 | -8.615850e-47 |
Msa0618970 | Msa1137970 | 0.812791 | 3.549827e-51 | -8.615850e-47 |
Msa0626450 | Msa1137970 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
Msa0628420 | Msa1137970 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
Msa0652690 | Msa1137970 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
Msa0664600 | Msa1137970 | 0.801385 | 9.232314e-49 | -8.615850e-47 |
Msa0690310 | Msa1137970 | 0.811046 | 8.514355e-51 | -8.615850e-47 |
Msa0755150 | Msa1137970 | 0.822850 | 1.899647e-53 | -8.615850e-47 |
Msa0755330 | Msa1137970 | 0.808406 | 3.146146e-50 | -8.615850e-47 |
Msa0800700 | Msa1137970 | 0.804132 | 2.501839e-49 | -8.615850e-47 |
Msa0138360 | Msa1137970 | 0.815468 | 9.102863e-52 | -8.615850e-47 |
Msa0147980 | Msa1137970 | 0.801925 | 7.152816e-49 | -8.615850e-47 |
Msa0152400 | Msa1137970 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
Msa0154840 | Msa1137970 | -0.821311 | 4.319954e-53 | -8.615850e-47 |
Msa0173800 | Msa1137970 | 0.818987 | 1.471139e-52 | -8.615850e-47 |
Msa0183760 | Msa1137970 | 0.803696 | 3.081888e-49 | -8.615850e-47 |
Msa0204770 | Msa1137970 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
Msa0237210 | Msa1137970 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
Msa0376630 | Msa1137970 | 0.802070 | 6.677631e-49 | -8.615850e-47 |
Msa0378720 | Msa1137970 | 0.808436 | 3.099925e-50 | -8.615850e-47 |
Msa0378970 | Msa1137970 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
Msa0428580 | Msa1137970 | 0.826895 | 2.110129e-54 | -8.615850e-47 |
Msa0468250 | Msa1137970 | 0.834664 | 2.630564e-56 | -8.615850e-47 |
Msa0468270 | Msa1137970 | 0.823267 | 1.518815e-53 | -8.615850e-47 |
Msa0474730 | Msa1137970 | 0.815132 | 1.081003e-51 | -8.615850e-47 |
Msa0474940 | Msa1137970 | 0.818512 | 1.885630e-52 | -8.615850e-47 |
Msa1009660 | Msa1137970 | 0.804196 | 2.425976e-49 | -8.615850e-47 |
Msa1028280 | Msa1137970 | 0.810983 | 8.786062e-51 | -8.615850e-47 |
Msa1034500 | Msa1137970 | 0.810915 | 9.089133e-51 | -8.615850e-47 |
Msa1050910 | Msa1137970 | 0.821901 | 3.154768e-53 | -8.615850e-47 |
Msa1050960 | Msa1137970 | 0.808558 | 2.920412e-50 | -8.615850e-47 |
Msa0274980 | Msa1137970 | 0.801094 | 1.058885e-48 | -8.615850e-47 |
Msa0297170 | Msa1137970 | 0.808905 | 2.461212e-50 | -8.615850e-47 |
Msa0315690 | Msa1137970 | 0.829245 | 5.732949e-55 | -8.615850e-47 |
Msa0328390 | Msa1137970 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
Msa0358400 | Msa1137970 | 0.838098 | 3.518270e-57 | -8.615850e-47 |
Msa1112380 | Msa1137970 | 0.823184 | 1.588225e-53 | -8.615850e-47 |
Msa1137970 | Msa1145810 | 0.815408 | 9.389186e-52 | -8.615850e-47 |
Msa1137970 | Msa1271130 | 0.803619 | 3.197117e-49 | -8.615850e-47 |
Msa1137970 | Msa1276660 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
Msa1137970 | Msa1333480 | 0.801202 | 1.006500e-48 | -8.615850e-47 |
Msa1137970 | Msa1371520 | 0.813153 | 2.955975e-51 | -8.615850e-47 |
Msa1137970 | Msa1393820 | 0.807376 | 5.209629e-50 | -8.615850e-47 |
Msa1137970 | Msa1439610 | 0.807968 | 3.899612e-50 | -8.615850e-47 |
Msa0491000 | Msa1137970 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
Msa0527190 | Msa1137970 | 0.825367 | 4.871170e-54 | -8.615850e-47 |
Msa0531250 | Msa1137970 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
Msa0574390 | Msa1137970 | 0.816842 | 4.488819e-52 | -8.615850e-47 |
Msa0576680 | Msa1137970 | 0.825839 | 3.766942e-54 | -8.615850e-47 |
Msa0588090 | Msa1137970 | 0.819833 | 9.434298e-53 | -8.615850e-47 |
Msa0601950 | Msa1137970 | 0.801401 | 9.163907e-49 | -8.615850e-47 |
Msa0847150 | Msa1137970 | 0.804322 | 2.283848e-49 | -8.615850e-47 |
Msa0945630 | Msa1137970 | 0.802910 | 4.482915e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1137970 | MtrunA17_Chr7g0220231 | 97.935 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.0 | 1555 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1137970 | AT5G38880.1 | 69.987 | 793 | 210 | 6 | 4 | 772 | 6 | 794 | 0.0 | 1114 |
Find 225 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTACAGTATCCACTTTA+TGG | 0.131855 | 7_4:-7034300 | Msa1137970:CDS |
GTTAGTTATGTTATGTTTAA+TGG | 0.182783 | 7_4:+7037461 | None:intergenic |
ATCTCGGCTTAGTCGCTTCT+TGG | 0.189413 | 7_4:-7037431 | Msa1137970:five_prime_UTR |
TATAGTAACAGAGACGTTTA+TGG | 0.205757 | 7_4:+7035160 | None:intergenic |
TCTGATTAGTGACTCGTTAT+TGG | 0.216819 | 7_4:-7037387 | Msa1137970:five_prime_UTR |
TGCAGGATGCTGCTTCATTT+TGG | 0.252455 | 7_4:-7032146 | Msa1137970:intron |
CAGTAATTGCCTGAAGTAAT+AGG | 0.266699 | 7_4:+7034788 | None:intergenic |
AAGAGAAGTTGCTGGTTTAA+AGG | 0.281025 | 7_4:-7032656 | Msa1137970:CDS |
GAAGAGAGAAGGGGAGGAAG+TGG | 0.281721 | 7_4:-7037016 | Msa1137970:CDS |
TAAGAAGGGGTTATTCTCTT+TGG | 0.297881 | 7_4:+7037535 | None:intergenic |
TTGATGAACGGGCGAATTAC+AGG | 0.306303 | 7_4:-7036858 | Msa1137970:intron |
GCACAAGATCCCGTCTAATA+TGG | 0.306533 | 7_4:+7030414 | None:intergenic |
TGGAAGCTTGCAAATATGTT+TGG | 0.312539 | 7_4:-7030051 | Msa1137970:CDS |
AGCTGTTTATTCTACTGTTA+AGG | 0.323612 | 7_4:-7035052 | Msa1137970:CDS |
GGAAGCTTGCAAATATGTTT+GGG | 0.327032 | 7_4:-7030050 | Msa1137970:CDS |
CATGTATTCAGCTAGATGTT+TGG | 0.329091 | 7_4:-7032687 | Msa1137970:intron |
GGAAGTGGAGGTTGCGTTGA+TGG | 0.329516 | 7_4:-7037001 | Msa1137970:CDS |
ATGTATTCAGCTAGATGTTT+GGG | 0.331353 | 7_4:-7032686 | Msa1137970:intron |
CTCCGGCGCCGGCGGCGTAT+TGG | 0.335674 | 7_4:+7037208 | None:intergenic |
GTACTTCAAGCATTTACTTT+GGG | 0.340628 | 7_4:-7029529 | Msa1137970:CDS |
CACGGTGAAGGGGATGGTGG+TGG | 0.347298 | 7_4:-7037051 | Msa1137970:CDS |
CTTTATGGAAATGGAAAACT+TGG | 0.352170 | 7_4:-7034285 | Msa1137970:CDS |
CAGTATCCACTTTATGGAAA+TGG | 0.356840 | 7_4:-7034294 | Msa1137970:CDS |
TGGAAGTCTTAGACAACTTC+AGG | 0.363351 | 7_4:-7033988 | Msa1137970:intron |
TTTAAGAAGTGCGGTGTATA+TGG | 0.370811 | 7_4:+7032498 | None:intergenic |
GATGTTACTTCTCGTTCAAT+TGG | 0.373150 | 7_4:-7034029 | Msa1137970:CDS |
AGTAATTGCCTGAAGTAATA+GGG | 0.377154 | 7_4:+7034789 | None:intergenic |
CGGCATCGACGGTTGTCGAC+TGG | 0.377291 | 7_4:-7029766 | Msa1137970:CDS |
CGAATGGCTTCACAAAGAAA+TGG | 0.379940 | 7_4:-7037247 | Msa1137970:CDS |
TTTGAATGCTCAGCAGAGTT+TGG | 0.382937 | 7_4:-7030071 | Msa1137970:CDS |
GGAAGAAGGAGAAGAGAGAA+GGG | 0.385063 | 7_4:-7037026 | Msa1137970:CDS |
TTCTTAATGCGCAGGCTTGG+AGG | 0.387723 | 7_4:-7030546 | Msa1137970:intron |
GCTGTTTATTCTACTGTTAA+GGG | 0.389280 | 7_4:-7035051 | Msa1137970:CDS |
TCAAGCAGAAGCAGCGAAGC+TGG | 0.397262 | 7_4:-7034881 | Msa1137970:CDS |
AAAGTAAATGCTTGAAGTAC+TGG | 0.399325 | 7_4:+7029532 | None:intergenic |
TCATGCCTACTTTGTTCAAC+AGG | 0.399440 | 7_4:-7030369 | Msa1137970:CDS |
GGCTTAGTCGCTTCTTGGAC+CGG | 0.403530 | 7_4:-7037426 | Msa1137970:five_prime_UTR |
GAAGAGGATGCTTGATGAAC+GGG | 0.405836 | 7_4:-7036869 | Msa1137970:CDS |
AGAAGGAGGTTGAGAGGTTG+AGG | 0.408148 | 7_4:-7036963 | Msa1137970:CDS |
CGTGGATTCTTCCGTTGAAA+TGG | 0.408715 | 7_4:-7035106 | Msa1137970:CDS |
GAGTCCTCCCCTATTACTTC+AGG | 0.412492 | 7_4:-7034797 | Msa1137970:CDS |
GGAGAGGGATTCGGTGAAGA+AGG | 0.415697 | 7_4:-7036980 | Msa1137970:CDS |
GTAATAGGGGAGGACTCTTT+AGG | 0.420923 | 7_4:+7034803 | None:intergenic |
TGATGAGTGGTGGGAGCAAC+CGG | 0.422273 | 7_4:-7029786 | Msa1137970:CDS |
CTGCCGTGGGAACATGATTC+CGG | 0.423922 | 7_4:-7037145 | Msa1137970:CDS |
AGCATGTAGAGGCTATTATC+TGG | 0.424373 | 7_4:+7031994 | None:intergenic |
GGCTTGGAGGGTTCAGATGC+TGG | 0.426927 | 7_4:-7030533 | Msa1137970:CDS |
CAGGCACTGCTTGAGGCCAT+CGG | 0.427432 | 7_4:-7031072 | Msa1137970:CDS |
ATCGGGTCCAGTGGATCATC+TGG | 0.429603 | 7_4:-7031054 | Msa1137970:CDS |
ATGGATGTTTCCTCTTCTGA+TGG | 0.430234 | 7_4:-7034330 | Msa1137970:CDS |
AGTACTTCAAGCATTTACTT+TGG | 0.430411 | 7_4:-7029530 | Msa1137970:CDS |
TGCGTTGATGGAGAGGGATT+CGG | 0.432482 | 7_4:-7036989 | Msa1137970:CDS |
GCTGAGACCCGACATATTGA+TGG | 0.433205 | 7_4:+7030952 | None:intergenic |
GGCCAATACGCCGCCGGCGC+CGG | 0.438971 | 7_4:-7037210 | Msa1137970:CDS |
TCGCTTCTTGGACCGGATAC+CGG | 0.439475 | 7_4:-7037419 | Msa1137970:five_prime_UTR |
GATGATCCGGTGTTTGTTGT+TGG | 0.439934 | 7_4:+7037575 | None:intergenic |
CGCACTTCTTAAAGCAAATA+CGG | 0.440398 | 7_4:-7032488 | Msa1137970:intron |
GGATGGTGGTGGGAGGAAGA+AGG | 0.444216 | 7_4:-7037040 | Msa1137970:CDS |
AGGTTTCTTTCTTGTTCTTG+AGG | 0.447405 | 7_4:+7029464 | None:intergenic |
GAATGTGAGGAGGAATATTA+CGG | 0.449349 | 7_4:-7037076 | Msa1137970:CDS |
ATATGAAAATAACATAGTTA+TGG | 0.453264 | 7_4:-7034349 | Msa1137970:CDS |
TGGTTCAGAAGCTAGTGTTT+TGG | 0.454086 | 7_4:-7030465 | Msa1137970:CDS |
AGGAAGAAGGAGAAGAGAGA+AGG | 0.454517 | 7_4:-7037027 | Msa1137970:CDS |
AGCTTCGCTGCTTCTGCTTG+AGG | 0.455594 | 7_4:+7034883 | None:intergenic |
TGATGGGCAGATTCCGGATG+AGG | 0.464339 | 7_4:-7034848 | Msa1137970:CDS |
AGACTCTTGTATCCGGTATC+CGG | 0.465747 | 7_4:+7037407 | None:intergenic |
CTTGGGGCTGATGTGCCTCC+AGG | 0.466724 | 7_4:-7034267 | Msa1137970:CDS |
GGGAAGAAGCGGAGAGGAAG+AGG | 0.466854 | 7_4:-7036885 | Msa1137970:CDS |
CATGCTTCCTTCTTCACCAC+AGG | 0.472095 | 7_4:-7031977 | Msa1137970:intron |
TTCTGCAGCTTGATGAGTGG+TGG | 0.472825 | 7_4:-7029796 | Msa1137970:intron |
ATAACTGTTCTAACCTCATC+CGG | 0.473562 | 7_4:+7034835 | None:intergenic |
GAATAAAGACCTGTCTTTCA+AGG | 0.474678 | 7_4:+7034226 | None:intergenic |
GACAGCAAGAGCCGGTGCTC+GGG | 0.476775 | 7_4:-7030989 | Msa1137970:CDS |
GTTATGTTATGTTTAATGGT+TGG | 0.477982 | 7_4:+7037465 | None:intergenic |
AAAACACCAGTCTTGAGTTC+AGG | 0.477991 | 7_4:+7030091 | None:intergenic |
TTAACTCTAATGAGTAAGAA+GGG | 0.478353 | 7_4:+7037521 | None:intergenic |
GTCGACTGGGTGACAGTGGA+TGG | 0.478572 | 7_4:-7029752 | Msa1137970:CDS |
AAATCAGCTCCTTGAAAGAC+AGG | 0.479838 | 7_4:-7034235 | Msa1137970:intron |
TGACAGCAAGAGCCGGTGCT+CGG | 0.480202 | 7_4:-7030990 | Msa1137970:CDS |
GAAGGAGAAGAGAGAAGGGG+AGG | 0.480900 | 7_4:-7037022 | Msa1137970:CDS |
TTCATCACATTGGCGGTCAT+AGG | 0.482889 | 7_4:+7035206 | None:intergenic |
AGGCACTGCTTGAGGCCATC+GGG | 0.484747 | 7_4:-7031071 | Msa1137970:CDS |
CAAGCAGAAGCAGCGAAGCT+GGG | 0.485794 | 7_4:-7034880 | Msa1137970:CDS |
TTTAACTCTAATGAGTAAGA+AGG | 0.489019 | 7_4:+7037520 | None:intergenic |
ATCTTCGGCTTCTTTCCTCT+CGG | 0.489665 | 7_4:+7032582 | None:intergenic |
TTCAAGCATTTACTTTGGGA+TGG | 0.490306 | 7_4:-7029525 | Msa1137970:CDS |
GCAAAGGAAAGAGAAGTTGC+TGG | 0.490620 | 7_4:-7032664 | Msa1137970:CDS |
GTGAAGGGGATGGTGGTGGG+AGG | 0.491173 | 7_4:-7037047 | Msa1137970:CDS |
GAGAGAAGGGGAGGAAGTGG+AGG | 0.492293 | 7_4:-7037013 | Msa1137970:CDS |
GCAAGGGATGCTCAAAGATC+AGG | 0.494346 | 7_4:-7035129 | Msa1137970:CDS |
GCTTCTAACATGTTATGATC+AGG | 0.495135 | 7_4:-7029693 | Msa1137970:CDS |
TGGATGTTTCCTCTTCTGAT+GGG | 0.496110 | 7_4:-7034329 | Msa1137970:CDS |
TGCTGGTCTAGCATCCGTAC+TGG | 0.496331 | 7_4:-7030516 | Msa1137970:CDS |
GGCAATTCCATCAATATGTC+GGG | 0.498007 | 7_4:-7030959 | Msa1137970:CDS |
ACGCCACTTCCTTCGTAAGC+AGG | 0.500417 | 7_4:+7034916 | None:intergenic |
TTTCGGATCGATTCGACTGA+CGG | 0.501011 | 7_4:+7037171 | None:intergenic |
CAATACGCCGCCGGCGCCGG+AGG | 0.501014 | 7_4:-7037207 | Msa1137970:CDS |
GGCATCGACGGTTGTCGACT+GGG | 0.501409 | 7_4:-7029765 | Msa1137970:CDS |
GAATGGCTTCACAAAGAAAT+GGG | 0.502140 | 7_4:-7037246 | Msa1137970:CDS |
GCTGCACTTCAGTATGCTGC+TGG | 0.502447 | 7_4:-7030931 | Msa1137970:CDS |
TTAATGGTTGGATCTGATAG+TGG | 0.503103 | 7_4:+7037477 | None:intergenic |
CTTTGTCTTGTGTTGAGTAG+AGG | 0.504792 | 7_4:+7037604 | None:intergenic |
TTATAAACCTGTGGTGAAGA+AGG | 0.508261 | 7_4:+7031970 | None:intergenic |
TTAATCTTGTCCATATTAGA+CGG | 0.508890 | 7_4:-7030424 | Msa1137970:CDS |
TCGAGTATCGCTTCCGGTGA+CGG | 0.509073 | 7_4:+7037267 | None:intergenic |
TGTTGTGAGGAGACAGAGGA+AGG | 0.512237 | 7_4:-7036938 | Msa1137970:CDS |
ATATTACGGTTCACGGTGAA+GGG | 0.512455 | 7_4:-7037062 | Msa1137970:CDS |
CAGGCATAAGCAAGTGATGT+TGG | 0.512719 | 7_4:-7035232 | Msa1137970:CDS |
TTGCAAATATGTTTGGGGAT+TGG | 0.513243 | 7_4:-7030044 | Msa1137970:intron |
CGGTGAAGAAGGAGGTTGAG+AGG | 0.514023 | 7_4:-7036969 | Msa1137970:CDS |
TTTCCTGCTTACGAAGGAAG+TGG | 0.514296 | 7_4:-7034919 | Msa1137970:CDS |
TCTGCAGCTTGATGAGTGGT+GGG | 0.516666 | 7_4:-7029795 | Msa1137970:intron |
ATCTTTCTGATGTGATGATC+CGG | 0.516949 | 7_4:+7037562 | None:intergenic |
AGCCATTCGAGTATCGCTTC+CGG | 0.518680 | 7_4:+7037261 | None:intergenic |
AATATTACGGTTCACGGTGA+AGG | 0.519453 | 7_4:-7037063 | Msa1137970:CDS |
TGCCGACGGATCCCGAGCAC+CGG | 0.519503 | 7_4:+7030978 | None:intergenic |
GGAGGTTGCGTTGATGGAGA+GGG | 0.522089 | 7_4:-7036995 | Msa1137970:CDS |
GGAATGTTGTGAGGAGACAG+AGG | 0.522586 | 7_4:-7036942 | Msa1137970:CDS |
CGAAATCGGAGAAGACGGTT+AGG | 0.523499 | 7_4:-7037098 | Msa1137970:CDS |
CGAGGATGCTAGAGGTTTCG+AGG | 0.524771 | 7_4:-7036906 | Msa1137970:CDS |
ACAATCTGCATCGCCGTCAC+CGG | 0.528251 | 7_4:-7037280 | Msa1137970:CDS |
TCGAAGCTTCATCACATTGG+CGG | 0.529322 | 7_4:+7035199 | None:intergenic |
AGCATCCGTACTGGAGTCCC+TGG | 0.531380 | 7_4:-7030507 | Msa1137970:CDS |
ACTAATCAGACTCTTGTATC+CGG | 0.533357 | 7_4:+7037400 | None:intergenic |
CACACTTCTGAAGAGAAAGA+AGG | 0.534065 | 7_4:+7029413 | None:intergenic |
ATAGTCCTGTTGAACAAAGT+AGG | 0.534887 | 7_4:+7030364 | None:intergenic |
GTCCAGTGGATCATCTGGAC+AGG | 0.537413 | 7_4:-7031049 | Msa1137970:CDS |
TGGAGGTTGCGTTGATGGAG+AGG | 0.537697 | 7_4:-7036996 | Msa1137970:CDS |
TCTTAATGCGCAGGCTTGGA+GGG | 0.537896 | 7_4:-7030545 | Msa1137970:intron |
TAATCTTGTCCATATTAGAC+GGG | 0.538291 | 7_4:-7030423 | Msa1137970:CDS |
ACACTTCTGAAGAGAAAGAA+GGG | 0.539150 | 7_4:+7029414 | None:intergenic |
TGAATCTCTTGTAGCTTACA+TGG | 0.539346 | 7_4:-7034962 | Msa1137970:CDS |
AAAACTATTTACCATTTCAA+CGG | 0.539456 | 7_4:+7035095 | None:intergenic |
TTTGTCTTGTGTTGAGTAGA+GGG | 0.540267 | 7_4:+7037605 | None:intergenic |
GCGTTGTATTTCAGACATCA+AGG | 0.541137 | 7_4:+7032621 | None:intergenic |
GAAGAAGGAGAAGAGAGAAG+GGG | 0.541221 | 7_4:-7037025 | Msa1137970:CDS |
CAGTCGACAACCGTCGATGC+CGG | 0.544298 | 7_4:+7029767 | None:intergenic |
TTCTCGAAGCTTCATCACAT+TGG | 0.544752 | 7_4:+7035196 | None:intergenic |
GTTACTATATAAATCAAGCA+AGG | 0.546325 | 7_4:-7035146 | Msa1137970:CDS |
AGGAGGAATATTACGGTTCA+CGG | 0.547542 | 7_4:-7037069 | Msa1137970:CDS |
GAGGGATTCGGTGAAGAAGG+AGG | 0.548565 | 7_4:-7036977 | Msa1137970:CDS |
ATAACTAACTAACTCGATCT+CGG | 0.550371 | 7_4:-7037447 | Msa1137970:five_prime_UTR |
ACGGTGAAGGGGATGGTGGT+GGG | 0.550521 | 7_4:-7037050 | Msa1137970:CDS |
TCAGCTAGATGTTTGGGCAA+AGG | 0.550594 | 7_4:-7032680 | Msa1137970:intron |
TTAGTGACTCGTTATTGGAC+CGG | 0.550638 | 7_4:-7037382 | Msa1137970:five_prime_UTR |
GTTGAGTAGAGGGAAATTGT+TGG | 0.553007 | 7_4:+7037615 | None:intergenic |
GTGGGAGCAACCGGCATCGA+CGG | 0.554649 | 7_4:-7029777 | Msa1137970:CDS |
GACGTTTCAAGCAAAACTCC+AGG | 0.555173 | 7_4:+7030489 | None:intergenic |
TTCTTCTGCAGCTTGATGAG+TGG | 0.555882 | 7_4:-7029799 | Msa1137970:intron |
TAAACAATGCTGCAGAAGCA+AGG | 0.557173 | 7_4:-7034094 | Msa1137970:CDS |
TCTGGTTCAGGCACTGCTTG+AGG | 0.561058 | 7_4:-7031079 | Msa1137970:intron |
TTCCTGTCCAGATGATCCAC+TGG | 0.561115 | 7_4:+7031047 | None:intergenic |
GCATACTCCCTTGCAGTGGA+TGG | 0.563944 | 7_4:+7032114 | None:intergenic |
TTTATGGAAATGGAAAACTT+GGG | 0.564742 | 7_4:-7034284 | Msa1137970:CDS |
CGGCAATTCCATCAATATGT+CGG | 0.564930 | 7_4:-7030960 | Msa1137970:CDS |
GTCAGCAACCATCCACTGCA+AGG | 0.565923 | 7_4:-7032122 | Msa1137970:CDS |
GGAGCCACGTCTCAAAATGT+TGG | 0.569343 | 7_4:-7034008 | Msa1137970:CDS |
TCAACAACAGCAGAACATGC+TGG | 0.570268 | 7_4:+7032075 | None:intergenic |
GAGCTGATGCAGAGATCTTG+AGG | 0.571777 | 7_4:-7034708 | Msa1137970:intron |
AAACTTATGAAACGTCTGCA+TGG | 0.572224 | 7_4:-7034059 | Msa1137970:CDS |
ACGGTTCACGGTGAAGGGGA+TGG | 0.572577 | 7_4:-7037057 | Msa1137970:CDS |
GAGGGAAAAGAATATTAGAA+AGG | 0.573113 | 7_4:-7034989 | Msa1137970:CDS |
CTTGAGGCCATCGGGTCCAG+TGG | 0.580795 | 7_4:-7031063 | Msa1137970:CDS |
CGTATTTGCTTTAAGAAGTG+CGG | 0.581014 | 7_4:+7032489 | None:intergenic |
AAACTCCAGGGACTCCAGTA+CGG | 0.583455 | 7_4:+7030502 | None:intergenic |
TTGTTCAACAGGACTATGAA+AGG | 0.583997 | 7_4:-7030358 | Msa1137970:intron |
TGGTTGCCTGAACTCAAGAC+TGG | 0.584766 | 7_4:-7030097 | Msa1137970:CDS |
GGAAGAGGATGCTTGATGAA+CGG | 0.585097 | 7_4:-7036870 | Msa1137970:CDS |
AAACAATGCTGCAGAAGCAA+GGG | 0.586745 | 7_4:-7034093 | Msa1137970:CDS |
GTGGGAACATGATTCCGGTA+TGG | 0.586849 | 7_4:-7037140 | Msa1137970:CDS |
TCTGATAGTGGATGGTGGAG+TGG | 0.586917 | 7_4:+7037489 | None:intergenic |
AGAACAAGAAAGAGCTGTCA+CGG | 0.587048 | 7_4:-7030125 | Msa1137970:CDS |
AGGAGAGCTCCCATCAGAAG+AGG | 0.587302 | 7_4:+7034320 | None:intergenic |
GCGTGCGAAATCGGAGAAGA+CGG | 0.587591 | 7_4:-7037103 | Msa1137970:CDS |
CCATAAAGTGGATACTGTAG+AGG | 0.590208 | 7_4:+7034300 | None:intergenic |
GAAGCTTGCAAATATGTTTG+GGG | 0.591476 | 7_4:-7030049 | Msa1137970:CDS |
AGAGGTTTCGAGGGAAGAAG+CGG | 0.591929 | 7_4:-7036896 | Msa1137970:CDS |
GAGGATGCTAGAGGTTTCGA+GGG | 0.592917 | 7_4:-7036905 | Msa1137970:CDS |
AAGCAGAAGCAGCGAAGCTG+GGG | 0.592988 | 7_4:-7034879 | Msa1137970:CDS |
GCATAAGCAAGTGATGTTGG+AGG | 0.594477 | 7_4:-7035229 | Msa1137970:CDS |
CACCGGAAGCGATACTCGAA+TGG | 0.595650 | 7_4:-7037263 | Msa1137970:CDS |
TGGTTGGATCTGATAGTGGA+TGG | 0.597101 | 7_4:+7037481 | None:intergenic |
TGAGACTTCAAATAGTGCAA+AGG | 0.605516 | 7_4:-7032055 | Msa1137970:CDS |
TTACTATATAAATCAAGCAA+GGG | 0.605937 | 7_4:-7035145 | Msa1137970:CDS |
GAGTAGAGGGAAATTGTTGG+TGG | 0.606278 | 7_4:+7037618 | None:intergenic |
AGATGATCCACTGGACCCGA+TGG | 0.607871 | 7_4:+7031056 | None:intergenic |
TTATGGAAATGGAAAACTTG+GGG | 0.612636 | 7_4:-7034283 | Msa1137970:CDS |
TCGACTGGGTGACAGTGGAT+GGG | 0.613672 | 7_4:-7029751 | Msa1137970:CDS |
GTTCACGGTGAAGGGGATGG+TGG | 0.622464 | 7_4:-7037054 | Msa1137970:CDS |
GGATGCTCAAAGATCAGGCG+TGG | 0.622609 | 7_4:-7035124 | Msa1137970:CDS |
GTAATTGCCTGAAGTAATAG+GGG | 0.623240 | 7_4:+7034790 | None:intergenic |
TAACTCTAATGAGTAAGAAG+GGG | 0.623288 | 7_4:+7037522 | None:intergenic |
ACAACACCAACAACAAACAC+CGG | 0.624079 | 7_4:-7037581 | Msa1137970:five_prime_UTR |
AGAGGTTGAGGAATGTTGTG+AGG | 0.624388 | 7_4:-7036951 | Msa1137970:CDS |
GGCTGCTTCACAGCAACTCG+AGG | 0.627593 | 7_4:+7029553 | None:intergenic |
CCGGCGGCGTATTGGCCGAG+TGG | 0.630885 | 7_4:+7037216 | None:intergenic |
GCACTTCAGTATGCTGCTGG+TGG | 0.632432 | 7_4:-7030928 | Msa1137970:intron |
CACTTCTGAAGAGAAAGAAG+GGG | 0.633656 | 7_4:+7029415 | None:intergenic |
TTTGAAAGCGAGGATGCTAG+AGG | 0.637353 | 7_4:-7036914 | Msa1137970:CDS |
TTGGATCTGATAGTGGATGG+TGG | 0.637400 | 7_4:+7037484 | None:intergenic |
CATATTGATGGAATTGCCGA+CGG | 0.639784 | 7_4:+7030964 | None:intergenic |
TCAGCAACCATCCACTGCAA+GGG | 0.641538 | 7_4:-7032121 | Msa1137970:CDS |
GTGAAGAAGGAAGCATGTAG+AGG | 0.641857 | 7_4:+7031983 | None:intergenic |
ATACCGGAATCATGTTCCCA+CGG | 0.646015 | 7_4:+7037142 | None:intergenic |
AGACGGTTAGGAATGTGAGG+AGG | 0.646417 | 7_4:-7037086 | Msa1137970:CDS |
AGAGGAAGGATTTGAAAGCG+AGG | 0.646849 | 7_4:-7036924 | Msa1137970:CDS |
TATTACGGTTCACGGTGAAG+GGG | 0.647653 | 7_4:-7037061 | Msa1137970:CDS |
AGACGGGATCTTGTGCAAAG+TGG | 0.651848 | 7_4:-7030407 | Msa1137970:CDS |
TAAAGCATACTCCCTTGCAG+TGG | 0.652047 | 7_4:+7032110 | None:intergenic |
GAAATGGGATACAGACCACT+CGG | 0.655763 | 7_4:-7037231 | Msa1137970:CDS |
AGAAGACGGTTAGGAATGTG+AGG | 0.658381 | 7_4:-7037089 | Msa1137970:CDS |
TTTCGAGGGAAGAAGCGGAG+AGG | 0.668597 | 7_4:-7036891 | Msa1137970:CDS |
TGCAAATGCAGAAATAAGTG+CGG | 0.669100 | 7_4:-7031019 | Msa1137970:CDS |
GGTTGTCGACTGGGTGACAG+TGG | 0.670105 | 7_4:-7029756 | Msa1137970:CDS |
ATTGCCTGAAGTAATAGGGG+AGG | 0.671022 | 7_4:+7034793 | None:intergenic |
ACGAGTTTAACTCAGTGACT+CGG | 0.671811 | 7_4:+7037328 | None:intergenic |
ACGTTTCAAGCAAAACTCCA+GGG | 0.675911 | 7_4:+7030490 | None:intergenic |
GTTACGAGGAAATTCCATAC+CGG | 0.676098 | 7_4:+7037126 | None:intergenic |
GGGGCTGATGTGCCTCCAGG+AGG | 0.680711 | 7_4:-7034264 | Msa1137970:CDS |
AAAGTAGGCATGATTCAACA+AGG | 0.689759 | 7_4:+7030379 | None:intergenic |
ACTTCTGAAGAGAAAGAAGG+GGG | 0.704062 | 7_4:+7029416 | None:intergenic |
CTTATGAAACGTCTGCATGG+AGG | 0.715108 | 7_4:-7034056 | Msa1137970:CDS |
TGAATAAGTTATGTGCCGAG+AGG | 0.730094 | 7_4:-7032597 | Msa1137970:CDS |
CATTGTCATTGAAACCACGA+GGG | 0.732985 | 7_4:-7035007 | Msa1137970:CDS |
TCATTGTCATTGAAACCACG+AGG | 0.733906 | 7_4:-7035008 | Msa1137970:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAATTTATAGTGAATT+AGG | - | chr7_4:7033054-7033073 | Msa1137970:intron | 10.0% |
!!! | CAATTTTTATATATTTTTGT+TGG | - | chr7_4:7033226-7033245 | Msa1137970:intron | 10.0% |
!! | TAAGTTCAATTAAATTATTT+AGG | - | chr7_4:7034131-7034150 | Msa1137970:CDS | 10.0% |
!!! | GAATTGAAAATATTTTATAA+CGG | + | chr7_4:7036306-7036325 | None:intergenic | 10.0% |
!! | AATTTAGTAAATTCATTTAT+AGG | - | chr7_4:7036721-7036740 | Msa1137970:intron | 10.0% |
!! | TTAGTTAAGTTAAAAAAACT+CGG | + | chr7_4:7029657-7029676 | None:intergenic | 15.0% |
!! | ATAATAGACTATAAAGTTAT+TGG | - | chr7_4:7030844-7030863 | Msa1137970:intron | 15.0% |
!!! | TTTGTGACTATAATTTTTTA+AGG | - | chr7_4:7032381-7032400 | Msa1137970:intron | 15.0% |
!! | ATTTACAAAGAATTTAAAAG+AGG | - | chr7_4:7032485-7032504 | Msa1137970:intron | 15.0% |
!! | ATATGAAAATAACATAGTTA+TGG | - | chr7_4:7032661-7032680 | Msa1137970:CDS | 15.0% |
!!! | TATATTTAACTTGCTTAAAA+AGG | + | chr7_4:7033081-7033100 | None:intergenic | 15.0% |
!!! | ATTTTTTTTGATATAGTTCA+TGG | - | chr7_4:7033894-7033913 | Msa1137970:intron | 15.0% |
!!! | TTTTTTTTGATATAGTTCAT+GGG | - | chr7_4:7033895-7033914 | Msa1137970:intron | 15.0% |
!!! | ATTTTCATAATTAAACATGT+CGG | + | chr7_4:7034026-7034045 | None:intergenic | 15.0% |
!!! | ATATTTCTAGCATTAATAAT+TGG | + | chr7_4:7034257-7034276 | None:intergenic | 15.0% |
!!! | TCTTTTTACATCAAAATTTA+TGG | - | chr7_4:7034276-7034295 | Msa1137970:CDS | 15.0% |
!! | TTCATTAATTTCTGTATTTA+TGG | - | chr7_4:7034559-7034578 | Msa1137970:intron | 15.0% |
!!! | TTTCCCTTTTTTTTTATAAA+CGG | - | chr7_4:7034814-7034833 | Msa1137970:CDS | 15.0% |
!! | AAACCGTTTATAAAAAAAAA+GGG | + | chr7_4:7034820-7034839 | None:intergenic | 15.0% |
!!! | TTATTTGATTTGCTAAAAAA+AGG | + | chr7_4:7035793-7035812 | None:intergenic | 15.0% |
!! | CTTATATTTATCATATATTC+TGG | - | chr7_4:7035913-7035932 | Msa1137970:intron | 15.0% |
!! | GTTAGTTATGTTATGTTTAA+TGG | + | chr7_4:7029552-7029571 | None:intergenic | 20.0% |
!! | AACTAGAAAACATCAAAATT+AGG | + | chr7_4:7030198-7030217 | None:intergenic | 20.0% |
!! | ATAAACTATGAAGTTATTGA+AGG | - | chr7_4:7030335-7030354 | Msa1137970:intron | 20.0% |
!! | TAAACTATGAAGTTATTGAA+GGG | - | chr7_4:7030336-7030355 | Msa1137970:intron | 20.0% |
!! | TATAAGAGATACTATTAAGA+AGG | - | chr7_4:7030681-7030700 | Msa1137970:intron | 20.0% |
!! | TGTATCAATGATATATTTGA+AGG | - | chr7_4:7031676-7031695 | Msa1137970:intron | 20.0% |
!! | TTACTATATAAATCAAGCAA+GGG | - | chr7_4:7031865-7031884 | Msa1137970:intron | 20.0% |
!! | AAAACTATTTACCATTTCAA+CGG | + | chr7_4:7031918-7031937 | None:intergenic | 20.0% |
!!! | TGACTATAATTTTTTAAGGT+TGG | - | chr7_4:7032385-7032404 | Msa1137970:intron | 20.0% |
!!! | TCTTTGTAAATTTAGCATTT+TGG | + | chr7_4:7032476-7032495 | None:intergenic | 20.0% |
!! | TAATTGAAAATATGCAAGTT+TGG | + | chr7_4:7032634-7032653 | None:intergenic | 20.0% |
!!! | AAACTTGCATATTTTCAATT+AGG | - | chr7_4:7032633-7032652 | Msa1137970:CDS | 20.0% |
!!! | TTTTTGCTTAAATATAGAAC+TGG | + | chr7_4:7033177-7033196 | None:intergenic | 20.0% |
!!! | AATGTGTTATTGAAAATAGT+AGG | - | chr7_4:7033474-7033493 | Msa1137970:intron | 20.0% |
!!! | TTTTTATGACAAATTACCTT+TGG | - | chr7_4:7033794-7033813 | Msa1137970:intron | 20.0% |
!!! | TTTCACATCTAATTATTTTG+AGG | - | chr7_4:7033824-7033843 | Msa1137970:intron | 20.0% |
!! | AATTATCAAATCAGATTTAC+AGG | + | chr7_4:7033853-7033872 | None:intergenic | 20.0% |
!!! | TTTTTTTGATATAGTTCATG+GGG | - | chr7_4:7033896-7033915 | Msa1137970:intron | 20.0% |
!!! | GGTTTTAATTCAATTTTACT+GGG | + | chr7_4:7033944-7033963 | None:intergenic | 20.0% |
!! | TAAAATTGAATTAAAACCCA+GGG | - | chr7_4:7033946-7033965 | Msa1137970:intron | 20.0% |
!!! | TTTTCATAATTAAACATGTC+GGG | + | chr7_4:7034025-7034044 | None:intergenic | 20.0% |
!! | TAAAAAATTTATAGTAGGGT+AGG | - | chr7_4:7034058-7034077 | Msa1137970:CDS | 20.0% |
!!! | AGAGTATTGGAAAATAAAAA+CGG | + | chr7_4:7034159-7034178 | None:intergenic | 20.0% |
!!! | TTTTACATCAAAATTTATGG+AGG | - | chr7_4:7034279-7034298 | Msa1137970:CDS | 20.0% |
!!! | TTGTTATTTGATATATGTAC+TGG | - | chr7_4:7034682-7034701 | Msa1137970:intron | 20.0% |
!! | CAAACCGTTTATAAAAAAAA+AGG | + | chr7_4:7034821-7034840 | None:intergenic | 20.0% |
!!! | TTTGTTTTCTTATATATTGC+AGG | - | chr7_4:7034847-7034866 | Msa1137970:CDS | 20.0% |
!! | GAGTTATATTTAAATGAACT+CGG | + | chr7_4:7035221-7035240 | None:intergenic | 20.0% |
!! | TAAATATAACTCAAACAGAT+TGG | - | chr7_4:7035229-7035248 | Msa1137970:CDS | 20.0% |
!! | AAATATAACTCAAACAGATT+GGG | - | chr7_4:7035230-7035249 | Msa1137970:CDS | 20.0% |
!!! | TCAATGTTGATTATTAAACA+CGG | + | chr7_4:7035258-7035277 | None:intergenic | 20.0% |
!! | TGTTTAATAATCAACATTGA+TGG | - | chr7_4:7035258-7035277 | Msa1137970:intron | 20.0% |
!!! | TAGAAGTGTATTTTTTACTT+TGG | - | chr7_4:7035637-7035656 | Msa1137970:intron | 20.0% |
!!! | TTGATTTAAAACTTGATCAT+GGG | + | chr7_4:7035737-7035756 | None:intergenic | 20.0% |
!!! | TTTGATTTAAAACTTGATCA+TGG | + | chr7_4:7035738-7035757 | None:intergenic | 20.0% |
!! | AATATGCAATAGTAATATAG+AGG | + | chr7_4:7036349-7036368 | None:intergenic | 20.0% |
!!! | TTTCAAAGGTATTTACTATT+GGG | - | chr7_4:7036393-7036412 | Msa1137970:intron | 20.0% |
!!! | TGTTTTGGAAGATTTATTAA+AGG | - | chr7_4:7036560-7036579 | Msa1137970:intron | 20.0% |
!! | GATATTTAATATAATGATGC+AGG | - | chr7_4:7036833-7036852 | Msa1137970:intron | 20.0% |
!!! | GACCAATTTTTCTTTAAATT+TGG | - | chr7_4:7036858-7036877 | Msa1137970:intron | 20.0% |
!! | TGCCAAATTTAAAGAAAAAT+TGG | + | chr7_4:7036863-7036882 | None:intergenic | 20.0% |
!!! | CTTTTTCACATGATTATAAT+AGG | + | chr7_4:7037298-7037317 | None:intergenic | 20.0% |
! | TTAACTCTAATGAGTAAGAA+GGG | + | chr7_4:7029492-7029511 | None:intergenic | 25.0% |
! | TTTAACTCTAATGAGTAAGA+AGG | + | chr7_4:7029493-7029512 | None:intergenic | 25.0% |
! | GTTATGTTATGTTTAATGGT+TGG | + | chr7_4:7029548-7029567 | None:intergenic | 25.0% |
!!! | TTTGATTTTGCTCCTAATTA+AGG | - | chr7_4:7030228-7030247 | Msa1137970:intron | 25.0% |
! | TTCTTCACTAAACCTTAATT+AGG | + | chr7_4:7030243-7030262 | None:intergenic | 25.0% |
! | AACATCTATTGTAGAAAAGA+TGG | - | chr7_4:7030537-7030556 | Msa1137970:intron | 25.0% |
!! | GTATCTCTTATAGTTTTTCT+AGG | + | chr7_4:7030673-7030692 | None:intergenic | 25.0% |
! | ATTTATCACAAATTCAACCA+GGG | + | chr7_4:7030823-7030842 | None:intergenic | 25.0% |
! | TATTTATCACAAATTCAACC+AGG | + | chr7_4:7031125-7031144 | None:intergenic | 25.0% |
!! | TCGTGTTATTAAATTGTTAC+CGG | + | chr7_4:7031350-7031369 | None:intergenic | 25.0% |
! | CAACAATGATATTTAATCTC+AGG | + | chr7_4:7031628-7031647 | None:intergenic | 25.0% |
! | GTTACTATATAAATCAAGCA+AGG | - | chr7_4:7031864-7031883 | Msa1137970:intron | 25.0% |
!! | TTTTAGTGCAAAAAATGAGA+AGG | - | chr7_4:7031934-7031953 | Msa1137970:intron | 25.0% |
!!! | ATCAATTTTCTCTATTTCTC+TGG | + | chr7_4:7032278-7032297 | None:intergenic | 25.0% |
!! | TTATTGATGATTTCTACAGA+AGG | + | chr7_4:7032412-7032431 | None:intergenic | 25.0% |
!! | TTGTAAATTTAGCATTTTGG+CGG | + | chr7_4:7032473-7032492 | None:intergenic | 25.0% |
!! | AAAGAGGCATACAATAATTT+AGG | - | chr7_4:7032501-7032520 | Msa1137970:CDS | 25.0% |
!! | ACAAACATACTATTTTACTC+TGG | + | chr7_4:7032538-7032557 | None:intergenic | 25.0% |
! | TTTATGGAAATGGAAAACTT+GGG | - | chr7_4:7032726-7032745 | Msa1137970:intron | 25.0% |
!! | AGTGTTTATTAGAAGTTTTG+TGG | + | chr7_4:7033150-7033169 | None:intergenic | 25.0% |
! | TTCACTTTACAATGTAAATG+TGG | - | chr7_4:7033341-7033360 | Msa1137970:intron | 25.0% |
!! | TCACCTCATTTAATTTAAGT+TGG | + | chr7_4:7033500-7033519 | None:intergenic | 25.0% |
! | ATAAAAAAGCAAATGTCTCA+CGG | + | chr7_4:7033602-7033621 | None:intergenic | 25.0% |
! | ACATGTTTACATGATTGATT+TGG | - | chr7_4:7033724-7033743 | Msa1137970:intron | 25.0% |
!!! | TTTTTTGATATAGTTCATGG+GGG | - | chr7_4:7033897-7033916 | Msa1137970:intron | 25.0% |
!!! | GGGTTTTAATTCAATTTTAC+TGG | + | chr7_4:7033945-7033964 | None:intergenic | 25.0% |
! | GTAAAATTGAATTAAAACCC+AGG | - | chr7_4:7033945-7033964 | Msa1137970:intron | 25.0% |
! | TATTAAAAGCAAAGATTCCT+CGG | + | chr7_4:7034113-7034132 | None:intergenic | 25.0% |
! | GAATACATGTAAATATAAGC+TGG | + | chr7_4:7034312-7034331 | None:intergenic | 25.0% |
!!! | CTTTTTTTTCAGAGAATCTT+CGG | + | chr7_4:7034446-7034465 | None:intergenic | 25.0% |
!! | AAGATTCTCTGAAAAAAAAG+TGG | - | chr7_4:7034446-7034465 | Msa1137970:intron | 25.0% |
! | AAAAAGATTGAAGAGTTTGA+TGG | - | chr7_4:7034469-7034488 | Msa1137970:intron | 25.0% |
! | TGAAAGAAGGAAAATACAAT+GGG | - | chr7_4:7035303-7035322 | Msa1137970:intron | 25.0% |
! | TATTGTTACTCACTAAACTA+CGG | + | chr7_4:7035671-7035690 | None:intergenic | 25.0% |
!!! | TTGATTTGCTAAAAAAAGGT+TGG | + | chr7_4:7035789-7035808 | None:intergenic | 25.0% |
!!! | TTTATCATATATTCTGGTTC+AGG | - | chr7_4:7035919-7035938 | Msa1137970:intron | 25.0% |
!!! | ACAGATTCAATAGTTTTGTT+AGG | + | chr7_4:7036255-7036274 | None:intergenic | 25.0% |
!!! | GTTTCAAAGGTATTTACTAT+TGG | - | chr7_4:7036392-7036411 | Msa1137970:intron | 25.0% |
!!! | TTCAAAGGTATTTACTATTG+GGG | - | chr7_4:7036394-7036413 | Msa1137970:intron | 25.0% |
! | TTAATCTTGTCCATATTAGA+CGG | - | chr7_4:7036586-7036605 | Msa1137970:intron | 25.0% |
! | AAATTATTAACCATGACTGT+AGG | + | chr7_4:7036706-7036725 | None:intergenic | 25.0% |
! | AAGCTTCAAACAAATTATCA+AGG | + | chr7_4:7036800-7036819 | None:intergenic | 25.0% |
!!! | AATTTTCAGCACTGTTTTAA+GGG | + | chr7_4:7037026-7037045 | None:intergenic | 25.0% |
!! | AAATTTTCAGCACTGTTTTA+AGG | + | chr7_4:7037027-7037046 | None:intergenic | 25.0% |
! | ATAGTTATCAAAGAAGAGAT+TGG | + | chr7_4:7037159-7037178 | None:intergenic | 25.0% |
!! | GAGAAAATTTAAGTCACTTT+AGG | + | chr7_4:7037373-7037392 | None:intergenic | 25.0% |
! | AATCTAAAAAAATCAACAGG+AGG | + | chr7_4:7037574-7037593 | None:intergenic | 25.0% |
TAACTCTAATGAGTAAGAAG+GGG | + | chr7_4:7029491-7029510 | None:intergenic | 30.0% | |
ATAACTAACTAACTCGATCT+CGG | - | chr7_4:7029563-7029582 | Msa1137970:CDS | 30.0% | |
AGTTAAAAAAACTCGGTATC+CGG | + | chr7_4:7029650-7029669 | None:intergenic | 30.0% | |
CATTACTGTATTGTAATCAC+TGG | - | chr7_4:7030264-7030283 | Msa1137970:intron | 30.0% | |
TATGAAGTTATTGAAGGGAA+GGG | - | chr7_4:7030341-7030360 | Msa1137970:intron | 30.0% | |
! | AAGGGAAGGGAAAATTTTAT+CGG | - | chr7_4:7030354-7030373 | Msa1137970:intron | 30.0% |
ATGACAACATTAGAGAGAAT+TGG | - | chr7_4:7030511-7030530 | Msa1137970:CDS | 30.0% | |
TGACAACATTAGAGAGAATT+GGG | - | chr7_4:7030512-7030531 | Msa1137970:CDS | 30.0% | |
GCATATAGATAGAAGAACTA+TGG | - | chr7_4:7030585-7030604 | Msa1137970:intron | 30.0% | |
! | GAACTATGGATTTTGTAGTT+AGG | - | chr7_4:7030599-7030618 | Msa1137970:intron | 30.0% |
! | AGATTAATGAGTTGGAGAAA+TGG | - | chr7_4:7030710-7030729 | Msa1137970:intron | 30.0% |
TCTATAAACTTCACTCTCTT+TGG | - | chr7_4:7030895-7030914 | Msa1137970:intron | 30.0% | |
ACAGTGTATCATGAAACAAT+GGG | + | chr7_4:7030976-7030995 | None:intergenic | 30.0% | |
AACAGTGTATCATGAAACAA+TGG | + | chr7_4:7030977-7030996 | None:intergenic | 30.0% | |
!! | CACAAAGTGTTGTTAAATAG+CGG | - | chr7_4:7031000-7031019 | Msa1137970:CDS | 30.0% |
TTGCAGAATGCAAAATATAG+TGG | + | chr7_4:7031062-7031081 | None:intergenic | 30.0% | |
ATTGGACGATTCTTAATCTA+AGG | + | chr7_4:7031096-7031115 | None:intergenic | 30.0% | |
!! | AATTTTCCTGGTTCTTCATT+GGG | - | chr7_4:7031284-7031303 | Msa1137970:intron | 30.0% |
ACTATGTAGCATCATAACTT+CGG | + | chr7_4:7031439-7031458 | None:intergenic | 30.0% | |
TTTCTATCTCACAACAAAGT+CGG | + | chr7_4:7031474-7031493 | None:intergenic | 30.0% | |
TGAATGGTTGAGATAATTAG+TGG | - | chr7_4:7031739-7031758 | Msa1137970:intron | 30.0% | |
GAATGGTTGAGATAATTAGT+GGG | - | chr7_4:7031740-7031759 | Msa1137970:intron | 30.0% | |
TATAGTAACAGAGACGTTTA+TGG | + | chr7_4:7031853-7031872 | None:intergenic | 30.0% | |
AGCTGTTTATTCTACTGTTA+AGG | - | chr7_4:7031958-7031977 | Msa1137970:intron | 30.0% | |
GCTGTTTATTCTACTGTTAA+GGG | - | chr7_4:7031959-7031978 | Msa1137970:intron | 30.0% | |
GAGGGAAAAGAATATTAGAA+AGG | - | chr7_4:7032021-7032040 | Msa1137970:CDS | 30.0% | |
AGTAATTGCCTGAAGTAATA+GGG | + | chr7_4:7032224-7032243 | None:intergenic | 30.0% | |
!! | CATTTTGGCGGATATTTTTT+GGG | + | chr7_4:7032461-7032480 | None:intergenic | 30.0% |
! | ACATACTATTTTACTCTGGT+TGG | + | chr7_4:7032534-7032553 | None:intergenic | 30.0% |
! | AGTTTTCCATTTCCATAAAG+TGG | + | chr7_4:7032725-7032744 | None:intergenic | 30.0% |
CTTTATGGAAATGGAAAACT+TGG | - | chr7_4:7032725-7032744 | Msa1137970:intron | 30.0% | |
TTATGGAAATGGAAAACTTG+GGG | - | chr7_4:7032727-7032746 | Msa1137970:intron | 30.0% | |
CAACAAAACTATTCAGTCTA+AGG | + | chr7_4:7032812-7032831 | None:intergenic | 30.0% | |
!!! | CTTAGACTGAATAGTTTTGT+TGG | - | chr7_4:7032810-7032829 | Msa1137970:intron | 30.0% |
!! | GTTTATTAGAAGTTTTGTGG+TGG | + | chr7_4:7033147-7033166 | None:intergenic | 30.0% |
TTGCTTAAATATAGAACTGG+AGG | + | chr7_4:7033174-7033193 | None:intergenic | 30.0% | |
TAATAACTGAACACAGACAA+GGG | + | chr7_4:7033285-7033304 | None:intergenic | 30.0% | |
AGGCCAACTTAAATTAAATG+AGG | - | chr7_4:7033494-7033513 | Msa1137970:intron | 30.0% | |
AAGTGTTTCATAATTTCCCT+GGG | + | chr7_4:7033965-7033984 | None:intergenic | 30.0% | |
! | TTTATCTTTTTCTATCTCCG+AGG | - | chr7_4:7034093-7034112 | Msa1137970:CDS | 30.0% |
TCCAATACTCTTCAAGAATT+AGG | - | chr7_4:7034168-7034187 | Msa1137970:intron | 30.0% | |
! | TCCTAATTCTTGAAGAGTAT+TGG | + | chr7_4:7034172-7034191 | None:intergenic | 30.0% |
! | GATTTTCTACTGTTATGAGT+TGG | - | chr7_4:7034190-7034209 | Msa1137970:intron | 30.0% |
! | GTTATGAGTTGGAAGAAAAA+AGG | - | chr7_4:7034201-7034220 | Msa1137970:intron | 30.0% |
ATAATTGGATAGAACAGAAC+AGG | + | chr7_4:7034242-7034261 | None:intergenic | 30.0% | |
ATGTATTCAGCTAGATGTTT+GGG | - | chr7_4:7034324-7034343 | Msa1137970:CDS | 30.0% | |
ACAGACAAATACATTATCCT+AGG | + | chr7_4:7034644-7034663 | None:intergenic | 30.0% | |
!!! | AAGAAGTGTCTGCTTTTTAT+CGG | - | chr7_4:7034990-7035009 | Msa1137970:CDS | 30.0% |
! | ATTAGAGCATTATAAACCTG+TGG | + | chr7_4:7035052-7035071 | None:intergenic | 30.0% |
ATTCAGATGAAACTGAAAGA+AGG | - | chr7_4:7035290-7035309 | Msa1137970:intron | 30.0% | |
CTGAAAGAAGGAAAATACAA+TGG | - | chr7_4:7035302-7035321 | Msa1137970:intron | 30.0% | |
GAAAGAAGGAAAATACAATG+GGG | - | chr7_4:7035304-7035323 | Msa1137970:intron | 30.0% | |
AAAGAAGGAAAATACAATGG+GGG | - | chr7_4:7035305-7035324 | Msa1137970:intron | 30.0% | |
GTATCTTGAGCTTTCATATT+TGG | + | chr7_4:7035347-7035366 | None:intergenic | 30.0% | |
! | GGAAATTACTGAGGATTTTT+CGG | - | chr7_4:7035529-7035548 | Msa1137970:intron | 30.0% |
CTCGTTCTCAAAAATGTATT+GGG | + | chr7_4:7035818-7035837 | None:intergenic | 30.0% | |
TAGAGGACAAATATTCAGTA+AGG | + | chr7_4:7036332-7036351 | None:intergenic | 30.0% | |
ACTTACAAACGTAGTTTCAA+AGG | - | chr7_4:7036379-7036398 | Msa1137970:intron | 30.0% | |
!! | TCAAAGGTATTTACTATTGG+GGG | - | chr7_4:7036395-7036414 | Msa1137970:intron | 30.0% |
! | AAATGATTTTCTTAATGCGC+AGG | - | chr7_4:7036456-7036475 | Msa1137970:intron | 30.0% |
TAATCTTGTCCATATTAGAC+GGG | - | chr7_4:7036587-7036606 | Msa1137970:intron | 30.0% | |
! | AAAACAGTGCTGAAAATTTC+AGG | - | chr7_4:7037028-7037047 | Msa1137970:CDS | 30.0% |
CAATTTGATATGCAATCTCT+TGG | - | chr7_4:7037127-7037146 | Msa1137970:CDS | 30.0% | |
TGCAATGTAAGACTAGAAAT+GGG | + | chr7_4:7037189-7037208 | None:intergenic | 30.0% | |
TTGCAATGTAAGACTAGAAA+TGG | + | chr7_4:7037190-7037209 | None:intergenic | 30.0% | |
TTCAATGTCAATAGCAAAGT+GGG | + | chr7_4:7037420-7037439 | None:intergenic | 30.0% | |
AAAGTAAATGCTTGAAGTAC+TGG | + | chr7_4:7037481-7037500 | None:intergenic | 30.0% | |
AGTACTTCAAGCATTTACTT+TGG | - | chr7_4:7037480-7037499 | Msa1137970:five_prime_UTR | 30.0% | |
GTACTTCAAGCATTTACTTT+GGG | - | chr7_4:7037481-7037500 | Msa1137970:five_prime_UTR | 30.0% | |
GGGAATCTAAAAAAATCAAC+AGG | + | chr7_4:7037577-7037596 | None:intergenic | 30.0% | |
TTTGTCTTGTGTTGAGTAGA+GGG | + | chr7_4:7029408-7029427 | None:intergenic | 35.0% | |
ATCTTTCTGATGTGATGATC+CGG | + | chr7_4:7029451-7029470 | None:intergenic | 35.0% | |
TAAGAAGGGGTTATTCTCTT+TGG | + | chr7_4:7029478-7029497 | None:intergenic | 35.0% | |
TTAATGGTTGGATCTGATAG+TGG | + | chr7_4:7029536-7029555 | None:intergenic | 35.0% | |
ACTAATCAGACTCTTGTATC+CGG | + | chr7_4:7029613-7029632 | None:intergenic | 35.0% | |
TCTGATTAGTGACTCGTTAT+TGG | - | chr7_4:7029623-7029642 | Msa1137970:intron | 35.0% | |
GAATGGCTTCACAAAGAAAT+GGG | - | chr7_4:7029764-7029783 | Msa1137970:CDS | 35.0% | |
GAATGTGAGGAGGAATATTA+CGG | - | chr7_4:7029934-7029953 | Msa1137970:intron | 35.0% | |
CTATGAAGTTATTGAAGGGA+AGG | - | chr7_4:7030340-7030359 | Msa1137970:intron | 35.0% | |
GACAACATTAGAGAGAATTG+GGG | - | chr7_4:7030513-7030532 | Msa1137970:CDS | 35.0% | |
AGATGGTAGAAACTAGACTT+AGG | - | chr7_4:7030554-7030573 | Msa1137970:intron | 35.0% | |
AGTTAGGAGAGTAGATTAGA+TGG | - | chr7_4:7030615-7030634 | Msa1137970:intron | 35.0% | |
GGATCTAGAGATTAATGAGT+TGG | - | chr7_4:7030702-7030721 | Msa1137970:intron | 35.0% | |
TATGTATCCGATTCACTTAG+TGG | - | chr7_4:7030764-7030783 | Msa1137970:intron | 35.0% | |
ATGTATCCGATTCACTTAGT+GGG | - | chr7_4:7030765-7030784 | Msa1137970:intron | 35.0% | |
TCTTATCCCACTAAGTGAAT+CGG | + | chr7_4:7030774-7030793 | None:intergenic | 35.0% | |
!! | GAATTTTCCTGGTTCTTCAT+TGG | - | chr7_4:7031283-7031302 | Msa1137970:intron | 35.0% |
GCAAAAAGATGAATAAGCCA+TGG | - | chr7_4:7031306-7031325 | Msa1137970:intron | 35.0% | |
CTGAATGTTATTACATGTGC+CGG | - | chr7_4:7031376-7031395 | Msa1137970:intron | 35.0% | |
TGGTAGTCGAAACTAAAAAC+TGG | - | chr7_4:7031516-7031535 | Msa1137970:intron | 35.0% | |
ATCACCTTGATTATTGTCGT+AGG | - | chr7_4:7031565-7031584 | Msa1137970:intron | 35.0% | |
TATGCCTACGACAATAATCA+AGG | + | chr7_4:7031572-7031591 | None:intergenic | 35.0% | |
TTATTGTCGTAGGCATATTG+TGG | - | chr7_4:7031575-7031594 | Msa1137970:intron | 35.0% | |
! | TAATGAACGTGTCATTGTTC+TGG | - | chr7_4:7031713-7031732 | Msa1137970:intron | 35.0% |
! | TCTAATATTCTTTTCCCTCG+TGG | + | chr7_4:7032020-7032039 | None:intergenic | 35.0% |
TGAATCTCTTGTAGCTTACA+TGG | - | chr7_4:7032048-7032067 | Msa1137970:CDS | 35.0% | |
ATAACTGTTCTAACCTCATC+CGG | + | chr7_4:7032178-7032197 | None:intergenic | 35.0% | |
GTAATTGCCTGAAGTAATAG+GGG | + | chr7_4:7032223-7032242 | None:intergenic | 35.0% | |
CAGTAATTGCCTGAAGTAAT+AGG | + | chr7_4:7032225-7032244 | None:intergenic | 35.0% | |
!! | GCATTTTGGCGGATATTTTT+TGG | + | chr7_4:7032462-7032481 | None:intergenic | 35.0% |
CAGTATCCACTTTATGGAAA+TGG | - | chr7_4:7032716-7032735 | Msa1137970:intron | 35.0% | |
GAATAAAGACCTGTCTTTCA+AGG | + | chr7_4:7032787-7032806 | None:intergenic | 35.0% | |
TGTGAACAGAGATACAACAT+TGG | + | chr7_4:7032855-7032874 | None:intergenic | 35.0% | |
AAACTTATGAAACGTCTGCA+TGG | - | chr7_4:7032951-7032970 | Msa1137970:intron | 35.0% | |
! | GATGTTACTTCTCGTTCAAT+TGG | - | chr7_4:7032981-7033000 | Msa1137970:intron | 35.0% |
CTAATAACTGAACACAGACA+AGG | + | chr7_4:7033286-7033305 | None:intergenic | 35.0% | |
TGTGAATTAACGATGTTCAG+TGG | - | chr7_4:7033314-7033333 | Msa1137970:intron | 35.0% | |
!! | AGACCTTTATGCTCTGAAAT+GGG | - | chr7_4:7033381-7033400 | Msa1137970:intron | 35.0% |
CAAGAAGAAGATAAGATGGA+CGG | + | chr7_4:7033416-7033435 | None:intergenic | 35.0% | |
CTTCCAAGAAGAAGATAAGA+TGG | + | chr7_4:7033420-7033439 | None:intergenic | 35.0% | |
CTTATCTTCTTCTTGGAAGA+TGG | - | chr7_4:7033421-7033440 | Msa1137970:intron | 35.0% | |
TCAACTATTAGTTACTCCCT+CGG | + | chr7_4:7033640-7033659 | None:intergenic | 35.0% | |
GACAATGTCTGAATAAACAC+TGG | + | chr7_4:7033667-7033686 | None:intergenic | 35.0% | |
CAAGTGTTTCATAATTTCCC+TGG | + | chr7_4:7033966-7033985 | None:intergenic | 35.0% | |
CATGTATTCAGCTAGATGTT+TGG | - | chr7_4:7034323-7034342 | Msa1137970:CDS | 35.0% | |
!! | AAGAGAAGTTGCTGGTTTAA+AGG | - | chr7_4:7034354-7034373 | Msa1137970:CDS | 35.0% |
! | TTTAAGAAGTGCGGTGTATA+TGG | + | chr7_4:7034515-7034534 | None:intergenic | 35.0% |
!! | CGTATTTGCTTTAAGAAGTG+CGG | + | chr7_4:7034524-7034543 | None:intergenic | 35.0% |
CGCACTTCTTAAAGCAAATA+CGG | - | chr7_4:7034522-7034541 | Msa1137970:intron | 35.0% | |
! | TACTTATTGCCAAGCCTTTT+GGG | - | chr7_4:7034595-7034614 | Msa1137970:intron | 35.0% |
ATTATCCTAGGATCCAAACA+GGG | + | chr7_4:7034632-7034651 | None:intergenic | 35.0% | |
GGATAATGTATTTGTCTGTG+TGG | - | chr7_4:7034645-7034664 | Msa1137970:intron | 35.0% | |
TTTGCATATACTGTTCCTAC+CGG | - | chr7_4:7034734-7034753 | Msa1137970:CDS | 35.0% | |
AAATGAATACCATTAAGGCC+CGG | + | chr7_4:7034756-7034775 | None:intergenic | 35.0% | |
GAGGGAAATGAATACCATTA+AGG | + | chr7_4:7034761-7034780 | None:intergenic | 35.0% | |
AGGGAAAAATAATGCGTTGT+TGG | + | chr7_4:7034801-7034820 | None:intergenic | 35.0% | |
TGAGACTTCAAATAGTGCAA+AGG | - | chr7_4:7034955-7034974 | Msa1137970:CDS | 35.0% | |
TTATAAACCTGTGGTGAAGA+AGG | + | chr7_4:7035043-7035062 | None:intergenic | 35.0% | |
!! | GACACAATGTTCTGAGTTTT+TGG | - | chr7_4:7035105-7035124 | Msa1137970:CDS | 35.0% |
!! | ATGTTCTGAGTTTTTGGATC+AGG | - | chr7_4:7035111-7035130 | Msa1137970:CDS | 35.0% |
!! | TGTTCTGAGTTTTTGGATCA+GGG | - | chr7_4:7035112-7035131 | Msa1137970:CDS | 35.0% |
!! | TCTTTATGGAGGTGTACTTT+TGG | + | chr7_4:7035140-7035159 | None:intergenic | 35.0% |
ACCTCCATAAAGATGCTTTA+TGG | - | chr7_4:7035147-7035166 | Msa1137970:CDS | 35.0% | |
! | TCCATAAAGCATCTTTATGG+AGG | + | chr7_4:7035151-7035170 | None:intergenic | 35.0% |
TCCATAAAGATGCTTTATGG+AGG | - | chr7_4:7035150-7035169 | Msa1137970:CDS | 35.0% | |
! | ACCTCCATAAAGCATCTTTA+TGG | + | chr7_4:7035154-7035173 | None:intergenic | 35.0% |
AAGAAGGAAAATACAATGGG+GGG | - | chr7_4:7035306-7035325 | Msa1137970:intron | 35.0% | |
TGAAAGCTCAAGATACAATG+AGG | - | chr7_4:7035351-7035370 | Msa1137970:intron | 35.0% | |
CATGAATTGAATGCAGTGTA+AGG | - | chr7_4:7035376-7035395 | Msa1137970:intron | 35.0% | |
! | CAGTGTAATTTTTGCGTATC+AGG | - | chr7_4:7035399-7035418 | Msa1137970:intron | 35.0% |
TTAAGAAGAATGCGAAGTTG+TGG | - | chr7_4:7035435-7035454 | Msa1137970:intron | 35.0% | |
CCTAGACTTCTTATAGGATA+GGG | + | chr7_4:7035467-7035486 | None:intergenic | 35.0% | |
TCCTAGACTTCTTATAGGAT+AGG | + | chr7_4:7035468-7035487 | None:intergenic | 35.0% | |
TCTGATTATTCTGCAAGAGT+CGG | - | chr7_4:7035562-7035581 | Msa1137970:intron | 35.0% | |
CCTCGTTCTCAAAAATGTAT+TGG | + | chr7_4:7035819-7035838 | None:intergenic | 35.0% | |
!! | CCAATACATTTTTGAGAACG+AGG | - | chr7_4:7035816-7035835 | Msa1137970:intron | 35.0% |
! | TGAGAACGAGGAACTTTTAA+TGG | - | chr7_4:7035828-7035847 | Msa1137970:intron | 35.0% |
TGCAAATGCAGAAATAAGTG+CGG | - | chr7_4:7035991-7036010 | Msa1137970:intron | 35.0% | |
ATTATTGTTCATGCGCTGAA+AGG | - | chr7_4:7036115-7036134 | Msa1137970:intron | 35.0% | |
ATATCAGACATCTGTGATAG+GGG | + | chr7_4:7036163-7036182 | None:intergenic | 35.0% | |
CATATCAGACATCTGTGATA+GGG | + | chr7_4:7036164-7036183 | None:intergenic | 35.0% | |
!!! | GATGGAAGTTCTTGTTGTTT+TGG | - | chr7_4:7036197-7036216 | Msa1137970:intron | 35.0% |
AAAGTAGGCATGATTCAACA+AGG | + | chr7_4:7036634-7036653 | None:intergenic | 35.0% | |
ATAGTCCTGTTGAACAAAGT+AGG | + | chr7_4:7036649-7036668 | None:intergenic | 35.0% | |
TTGTTCAACAGGACTATGAA+AGG | - | chr7_4:7036652-7036671 | Msa1137970:intron | 35.0% | |
TATTAACCATGACTGTAGGT+AGG | + | chr7_4:7036702-7036721 | None:intergenic | 35.0% | |
AGGTTTGAATCTGAATGAGA+TGG | + | chr7_4:7036780-7036799 | None:intergenic | 35.0% | |
TGGAAGCTTGCAAATATGTT+TGG | - | chr7_4:7036959-7036978 | Msa1137970:CDS | 35.0% | |
GGAAGCTTGCAAATATGTTT+GGG | - | chr7_4:7036960-7036979 | Msa1137970:CDS | 35.0% | |
GAAGCTTGCAAATATGTTTG+GGG | - | chr7_4:7036961-7036980 | Msa1137970:CDS | 35.0% | |
TTGCAAATATGTTTGGGGAT+TGG | - | chr7_4:7036966-7036985 | Msa1137970:CDS | 35.0% | |
GCTTCTAACATGTTATGATC+AGG | - | chr7_4:7037317-7037336 | Msa1137970:five_prime_UTR | 35.0% | |
GGGAATTGTTTAGACAATCT+GGG | + | chr7_4:7037400-7037419 | None:intergenic | 35.0% | |
TGGGAATTGTTTAGACAATC+TGG | + | chr7_4:7037401-7037420 | None:intergenic | 35.0% | |
CTTCAATGTCAATAGCAAAG+TGG | + | chr7_4:7037421-7037440 | None:intergenic | 35.0% | |
! | TTCAAGCATTTACTTTGGGA+TGG | - | chr7_4:7037485-7037504 | Msa1137970:five_prime_UTR | 35.0% |
! | TCTTGTTCTTGAGGTTTTCT+TGG | + | chr7_4:7037540-7037559 | None:intergenic | 35.0% |
AGGTTTCTTTCTTGTTCTTG+AGG | + | chr7_4:7037549-7037568 | None:intergenic | 35.0% | |
AAAAAAATCAACAGGAGGAG+AGG | + | chr7_4:7037569-7037588 | None:intergenic | 35.0% | |
! | ACACTTCTGAAGAGAAAGAA+GGG | + | chr7_4:7037599-7037618 | None:intergenic | 35.0% |
GTTGAGTAGAGGGAAATTGT+TGG | + | chr7_4:7029398-7029417 | None:intergenic | 40.0% | |
CTTTGTCTTGTGTTGAGTAG+AGG | + | chr7_4:7029409-7029428 | None:intergenic | 40.0% | |
ACAACACCAACAACAAACAC+CGG | - | chr7_4:7029429-7029448 | Msa1137970:CDS | 40.0% | |
TTAGTGACTCGTTATTGGAC+CGG | - | chr7_4:7029628-7029647 | Msa1137970:intron | 40.0% | |
ACGAGTTTAACTCAGTGACT+CGG | + | chr7_4:7029685-7029704 | None:intergenic | 40.0% | |
CGAATGGCTTCACAAAGAAA+TGG | - | chr7_4:7029763-7029782 | Msa1137970:CDS | 40.0% | |
GTTACGAGGAAATTCCATAC+CGG | + | chr7_4:7029887-7029906 | None:intergenic | 40.0% | |
AGGAGGAATATTACGGTTCA+CGG | - | chr7_4:7029941-7029960 | Msa1137970:intron | 40.0% | |
AATATTACGGTTCACGGTGA+AGG | - | chr7_4:7029947-7029966 | Msa1137970:intron | 40.0% | |
ATATTACGGTTCACGGTGAA+GGG | - | chr7_4:7029948-7029967 | Msa1137970:intron | 40.0% | |
! | GGGAAAATTTTATCGGACAG+TGG | - | chr7_4:7030361-7030380 | Msa1137970:CDS | 40.0% |
AGTTAAGCGTAACAGAGATG+AGG | - | chr7_4:7030442-7030461 | Msa1137970:CDS | 40.0% | |
TGGTAGAAACTAGACTTAGG+TGG | - | chr7_4:7030557-7030576 | Msa1137970:intron | 40.0% | |
AAACTAGACTTAGGTGGTCT+GGG | - | chr7_4:7030563-7030582 | Msa1137970:intron | 40.0% | |
TAGGAGAGTAGATTAGATGG+AGG | - | chr7_4:7030618-7030637 | Msa1137970:intron | 40.0% | |
AGGAGAGTAGATTAGATGGA+GGG | - | chr7_4:7030619-7030638 | Msa1137970:intron | 40.0% | |
TCACTTAGTGGGATAAGACT+TGG | - | chr7_4:7030776-7030795 | Msa1137970:intron | 40.0% | |
TTCAACCAGTGATTGCACTA+CGG | + | chr7_4:7030811-7030830 | None:intergenic | 40.0% | |
ATCACAAATTCAACCAGGGA+TGG | + | chr7_4:7031120-7031139 | None:intergenic | 40.0% | |
CTCTCCATAGATGAGTCAAA+TGG | - | chr7_4:7031226-7031245 | Msa1137970:intron | 40.0% | |
GGAACCATTTGACTCATCTA+TGG | + | chr7_4:7031233-7031252 | None:intergenic | 40.0% | |
! | CAAGTGCTACTAACAACACA+AGG | + | chr7_4:7031254-7031273 | None:intergenic | 40.0% |
! | CTTGTGTTGTTAGTAGCACT+TGG | - | chr7_4:7031252-7031271 | Msa1137970:intron | 40.0% |
TTAGTAGCACTTGGTTGAAG+TGG | - | chr7_4:7031261-7031280 | Msa1137970:intron | 40.0% | |
! | TGGTTGAAGTGGAATTTTCC+TGG | - | chr7_4:7031272-7031291 | Msa1137970:intron | 40.0% |
! | TTTTTGCCCAATGAAGAACC+AGG | + | chr7_4:7031293-7031312 | None:intergenic | 40.0% |
! | CTTCGGATTGAAAGCATGTT+CGG | + | chr7_4:7031422-7031441 | None:intergenic | 40.0% |
!!! | GAAAGAACACTTTTTCCTGC+TGG | - | chr7_4:7031490-7031509 | Msa1137970:intron | 40.0% |
! | GTCATTGTTCTGGCATTGAA+TGG | - | chr7_4:7031723-7031742 | Msa1137970:intron | 40.0% |
TTCTCGAAGCTTCATCACAT+TGG | + | chr7_4:7031817-7031836 | None:intergenic | 40.0% | |
TCATTGTCATTGAAACCACG+AGG | - | chr7_4:7032002-7032021 | Msa1137970:CDS | 40.0% | |
CATTGTCATTGAAACCACGA+GGG | - | chr7_4:7032003-7032022 | Msa1137970:CDS | 40.0% | |
! | AGTTCTTTTCCTGCTTACGA+AGG | - | chr7_4:7032085-7032104 | Msa1137970:CDS | 40.0% |
!! | AAGCTGGGGTTTGATTTTGA+TGG | - | chr7_4:7032145-7032164 | Msa1137970:intron | 40.0% |
!! | AGCTGGGGTTTGATTTTGAT+GGG | - | chr7_4:7032146-7032165 | Msa1137970:intron | 40.0% |
!! | TGATTTTGATGGGCAGATTC+CGG | - | chr7_4:7032156-7032175 | Msa1137970:intron | 40.0% |
! | TATTTTACTCTGGTTGGCAG+GGG | + | chr7_4:7032528-7032547 | None:intergenic | 40.0% |
! | CTATTTTACTCTGGTTGGCA+GGG | + | chr7_4:7032529-7032548 | None:intergenic | 40.0% |
! | ACTATTTTACTCTGGTTGGC+AGG | + | chr7_4:7032530-7032549 | None:intergenic | 40.0% |
ATGGATGTTTCCTCTTCTGA+TGG | - | chr7_4:7032680-7032699 | Msa1137970:intron | 40.0% | |
TGGATGTTTCCTCTTCTGAT+GGG | - | chr7_4:7032681-7032700 | Msa1137970:intron | 40.0% | |
CCATAAAGTGGATACTGTAG+AGG | + | chr7_4:7032713-7032732 | None:intergenic | 40.0% | |
CCTCTACAGTATCCACTTTA+TGG | - | chr7_4:7032710-7032729 | Msa1137970:intron | 40.0% | |
AAATCAGCTCCTTGAAAGAC+AGG | - | chr7_4:7032775-7032794 | Msa1137970:intron | 40.0% | |
! | AGCTCATGTTCAGCAGTTTT+TGG | - | chr7_4:7032878-7032897 | Msa1137970:intron | 40.0% |
TAAACAATGCTGCAGAAGCA+AGG | - | chr7_4:7032916-7032935 | Msa1137970:intron | 40.0% | |
AAACAATGCTGCAGAAGCAA+GGG | - | chr7_4:7032917-7032936 | Msa1137970:intron | 40.0% | |
!!! | ACTTCCAACATTTTGAGACG+TGG | + | chr7_4:7033009-7033028 | None:intergenic | 40.0% |
TGGAAGTCTTAGACAACTTC+AGG | - | chr7_4:7033022-7033041 | Msa1137970:intron | 40.0% | |
GTAGTAGGAATCACACACAA+AGG | + | chr7_4:7033125-7033144 | None:intergenic | 40.0% | |
!! | AGAAGTTTTGTGGTGGTAGT+AGG | + | chr7_4:7033140-7033159 | None:intergenic | 40.0% |
AACACAGACAAGGGTAATTC+GGG | + | chr7_4:7033276-7033295 | None:intergenic | 40.0% | |
GAACACAGACAAGGGTAATT+CGG | + | chr7_4:7033277-7033296 | None:intergenic | 40.0% | |
!! | CAGACCTTTATGCTCTGAAA+TGG | - | chr7_4:7033380-7033399 | Msa1137970:intron | 40.0% |
CTTCCCATTTCAGAGCATAA+AGG | + | chr7_4:7033387-7033406 | None:intergenic | 40.0% | |
CGTCCATCTTATCTTCTTCT+TGG | - | chr7_4:7033414-7033433 | Msa1137970:intron | 40.0% | |
CAACTATTAGTTACTCCCTC+GGG | + | chr7_4:7033639-7033658 | None:intergenic | 40.0% | |
GACATTGTCTTAAGCTGCTT+TGG | - | chr7_4:7033678-7033697 | Msa1137970:intron | 40.0% | |
GATGTGAAAAGCTGAACCAA+AGG | + | chr7_4:7033813-7033832 | None:intergenic | 40.0% | |
TGAATAAGTTATGTGCCGAG+AGG | - | chr7_4:7034413-7034432 | Msa1137970:intron | 40.0% | |
! | GTACTTATTGCCAAGCCTTT+TGG | - | chr7_4:7034594-7034613 | Msa1137970:intron | 40.0% |
CCATTATTACCCAAAAGGCT+TGG | + | chr7_4:7034607-7034626 | None:intergenic | 40.0% | |
!! | CCAAGCCTTTTGGGTAATAA+TGG | - | chr7_4:7034604-7034623 | Msa1137970:intron | 40.0% |
GGGAACCATTATTACCCAAA+AGG | + | chr7_4:7034612-7034631 | None:intergenic | 40.0% | |
GGTAATAATGGTTCCCTGTT+TGG | - | chr7_4:7034616-7034635 | Msa1137970:intron | 40.0% | |
CATTATCCTAGGATCCAAAC+AGG | + | chr7_4:7034633-7034652 | None:intergenic | 40.0% | |
!! | TGTACTGGCTACTTAGACAA+TGG | - | chr7_4:7034697-7034716 | Msa1137970:intron | 40.0% |
TTGCATATACTGTTCCTACC+GGG | - | chr7_4:7034735-7034754 | Msa1137970:CDS | 40.0% | |
AGCATGTAGAGGCTATTATC+TGG | + | chr7_4:7035019-7035038 | None:intergenic | 40.0% | |
!! | GCTTTATGGAGGTGTACTTT+TGG | - | chr7_4:7035161-7035180 | Msa1137970:CDS | 40.0% |
GATCTTCCATTTCTACCGTT+TGG | - | chr7_4:7035183-7035202 | Msa1137970:CDS | 40.0% | |
TGACTACCAAACGGTAGAAA+TGG | + | chr7_4:7035192-7035211 | None:intergenic | 40.0% | |
CGGAAACTATGACTACCAAA+CGG | + | chr7_4:7035201-7035220 | None:intergenic | 40.0% | |
CCCTATCCTATAAGAAGTCT+AGG | - | chr7_4:7035464-7035483 | Msa1137970:intron | 40.0% | |
CTTGCTCCTAGACTTCTTAT+AGG | + | chr7_4:7035473-7035492 | None:intergenic | 40.0% | |
GACTCTTGCAGAATAATCAG+AGG | + | chr7_4:7035563-7035582 | None:intergenic | 40.0% | |
AAAGTTGCATGTGAGAGAAG+TGG | - | chr7_4:7035585-7035604 | Msa1137970:intron | 40.0% | |
CAAAACAAGGGATACGGTAT+AGG | + | chr7_4:7035708-7035727 | None:intergenic | 40.0% | |
ACAGAGCAAAACAAGGGATA+CGG | + | chr7_4:7035714-7035733 | None:intergenic | 40.0% | |
CATATTGATGGAATTGCCGA+CGG | + | chr7_4:7036049-7036068 | None:intergenic | 40.0% | |
CGGCAATTCCATCAATATGT+CGG | - | chr7_4:7036050-7036069 | Msa1137970:intron | 40.0% | |
GGCAATTCCATCAATATGTC+GGG | - | chr7_4:7036051-7036070 | Msa1137970:intron | 40.0% | |
CCATATCAGACATCTGTGAT+AGG | + | chr7_4:7036165-7036184 | None:intergenic | 40.0% | |
CCTATCACAGATGTCTGATA+TGG | - | chr7_4:7036162-7036181 | Msa1137970:intron | 40.0% | |
ATCACAGATGTCTGATATGG+AGG | - | chr7_4:7036165-7036184 | Msa1137970:intron | 40.0% | |
ACAACAAGAACTTCCATCCT+GGG | + | chr7_4:7036195-7036214 | None:intergenic | 40.0% | |
AACAACAAGAACTTCCATCC+TGG | + | chr7_4:7036196-7036215 | None:intergenic | 40.0% | |
! | ATTTTCTTAATGCGCAGGCT+TGG | - | chr7_4:7036461-7036480 | Msa1137970:intron | 40.0% |
ACGTTTCAAGCAAAACTCCA+GGG | + | chr7_4:7036523-7036542 | None:intergenic | 40.0% | |
! | TGGTTCAGAAGCTAGTGTTT+TGG | - | chr7_4:7036545-7036564 | Msa1137970:intron | 40.0% |
TCATGCCTACTTTGTTCAAC+AGG | - | chr7_4:7036641-7036660 | Msa1137970:intron | 40.0% | |
ATGACTGTAGGTAGGATTTG+GGG | + | chr7_4:7036694-7036713 | None:intergenic | 40.0% | |
CATGACTGTAGGTAGGATTT+GGG | + | chr7_4:7036695-7036714 | None:intergenic | 40.0% | |
AGAACAAGAAAGAGCTGTCA+CGG | - | chr7_4:7036885-7036904 | Msa1137970:CDS | 40.0% | |
AAAGAGCTGTCACGGAAAAA+TGG | - | chr7_4:7036893-7036912 | Msa1137970:CDS | 40.0% | |
AAAACACCAGTCTTGAGTTC+AGG | + | chr7_4:7036922-7036941 | None:intergenic | 40.0% | |
TTTGAATGCTCAGCAGAGTT+TGG | - | chr7_4:7036939-7036958 | Msa1137970:CDS | 40.0% | |
! | ACTTCTGAAGAGAAAGAAGG+GGG | + | chr7_4:7037597-7037616 | None:intergenic | 40.0% |
! | CACTTCTGAAGAGAAAGAAG+GGG | + | chr7_4:7037598-7037617 | None:intergenic | 40.0% |
! | CACACTTCTGAAGAGAAAGA+AGG | + | chr7_4:7037600-7037619 | None:intergenic | 40.0% |
!! | GATGATCCGGTGTTTGTTGT+TGG | + | chr7_4:7029438-7029457 | None:intergenic | 45.0% |
!! | TTGGATCTGATAGTGGATGG+TGG | + | chr7_4:7029529-7029548 | None:intergenic | 45.0% |
!! | TGGTTGGATCTGATAGTGGA+TGG | + | chr7_4:7029532-7029551 | None:intergenic | 45.0% |
AGACTCTTGTATCCGGTATC+CGG | + | chr7_4:7029606-7029625 | None:intergenic | 45.0% | |
GAAATGGGATACAGACCACT+CGG | - | chr7_4:7029779-7029798 | Msa1137970:CDS | 45.0% | |
!! | TTTCGGATCGATTCGACTGA+CGG | + | chr7_4:7029842-7029861 | None:intergenic | 45.0% |
! | TGTTCCCACGGCAGATTTTT+CGG | + | chr7_4:7029859-7029878 | None:intergenic | 45.0% |
ATACCGGAATCATGTTCCCA+CGG | + | chr7_4:7029871-7029890 | None:intergenic | 45.0% | |
AGAAGACGGTTAGGAATGTG+AGG | - | chr7_4:7029921-7029940 | Msa1137970:intron | 45.0% | |
TATTACGGTTCACGGTGAAG+GGG | - | chr7_4:7029949-7029968 | Msa1137970:intron | 45.0% | |
AGGAAGAAGGAGAAGAGAGA+AGG | - | chr7_4:7029983-7030002 | Msa1137970:intron | 45.0% | |
GGAAGAAGGAGAAGAGAGAA+GGG | - | chr7_4:7029984-7030003 | Msa1137970:intron | 45.0% | |
GAAGAAGGAGAAGAGAGAAG+GGG | - | chr7_4:7029985-7030004 | Msa1137970:intron | 45.0% | |
AGAGGTTGAGGAATGTTGTG+AGG | - | chr7_4:7030059-7030078 | Msa1137970:CDS | 45.0% | |
AGAGGAAGGATTTGAAAGCG+AGG | - | chr7_4:7030086-7030105 | Msa1137970:CDS | 45.0% | |
TTTGAAAGCGAGGATGCTAG+AGG | - | chr7_4:7030096-7030115 | Msa1137970:CDS | 45.0% | |
GGAAGAGGATGCTTGATGAA+CGG | - | chr7_4:7030140-7030159 | Msa1137970:CDS | 45.0% | |
GAAGAGGATGCTTGATGAAC+GGG | - | chr7_4:7030141-7030160 | Msa1137970:CDS | 45.0% | |
TTGATGAACGGGCGAATTAC+AGG | - | chr7_4:7030152-7030171 | Msa1137970:CDS | 45.0% | |
! | AACGGGCGAATTACAGGTTT+TGG | - | chr7_4:7030158-7030177 | Msa1137970:CDS | 45.0% |
TTATCGGACAGTGGTAAGAC+TGG | - | chr7_4:7030370-7030389 | Msa1137970:CDS | 45.0% | |
!! | TACGCTTAACTTGTTCGTGC+CGG | + | chr7_4:7030433-7030452 | None:intergenic | 45.0% |
GAAACTAGACTTAGGTGGTC+TGG | - | chr7_4:7030562-7030581 | Msa1137970:intron | 45.0% | |
GGAGAGTAGATTAGATGGAG+GGG | - | chr7_4:7030620-7030639 | Msa1137970:intron | 45.0% | |
GAGCCAAATCACTAGAGGTA+GGG | - | chr7_4:7030642-7030661 | Msa1137970:intron | 45.0% | |
AGCCAAATCACTAGAGGTAG+GGG | - | chr7_4:7030643-7030662 | Msa1137970:intron | 45.0% | |
TTCCCCTACCTCTAGTGATT+TGG | + | chr7_4:7030648-7030667 | None:intergenic | 45.0% | |
CTTAGTGGGATAAGACTTGG+TGG | - | chr7_4:7030779-7030798 | Msa1137970:intron | 45.0% | |
TAAGACCGTAGTGCAATCAC+TGG | - | chr7_4:7030803-7030822 | Msa1137970:intron | 45.0% | |
CAGCTATAGCGATGACATAG+TGG | - | chr7_4:7030936-7030955 | Msa1137970:CDS | 45.0% | |
AATTCAACCAGGGATGGCAT+TGG | + | chr7_4:7031114-7031133 | None:intergenic | 45.0% | |
GTCTATGTGTCAGTGTTCCA+TGG | + | chr7_4:7031326-7031345 | None:intergenic | 45.0% | |
GAACACTGACACATAGACAC+CGG | - | chr7_4:7031328-7031347 | Msa1137970:intron | 45.0% | |
!!! | ACACTTTTTCCTGCTGGCTT+TGG | - | chr7_4:7031496-7031515 | Msa1137970:intron | 45.0% |
ACTTGCTTATGCCTGCAGAA+TGG | + | chr7_4:7031773-7031792 | None:intergenic | 45.0% | |
CAGGCATAAGCAAGTGATGT+TGG | - | chr7_4:7031778-7031797 | Msa1137970:intron | 45.0% | |
GCATAAGCAAGTGATGTTGG+AGG | - | chr7_4:7031781-7031800 | Msa1137970:intron | 45.0% | |
TTCATCACATTGGCGGTCAT+AGG | + | chr7_4:7031807-7031826 | None:intergenic | 45.0% | |
TCGAAGCTTCATCACATTGG+CGG | + | chr7_4:7031814-7031833 | None:intergenic | 45.0% | |
CGTGGATTCTTCCGTTGAAA+TGG | - | chr7_4:7031904-7031923 | Msa1137970:intron | 45.0% | |
TTTCCTGCTTACGAAGGAAG+TGG | - | chr7_4:7032091-7032110 | Msa1137970:CDS | 45.0% | |
GTAATAGGGGAGGACTCTTT+AGG | + | chr7_4:7032210-7032229 | None:intergenic | 45.0% | |
ATTGCCTGAAGTAATAGGGG+AGG | + | chr7_4:7032220-7032239 | None:intergenic | 45.0% | |
!!! | TGATTTTGACTTCCTCCTGG+AGG | + | chr7_4:7032761-7032780 | None:intergenic | 45.0% |
!!! | AGCTGATTTTGACTTCCTCC+TGG | + | chr7_4:7032764-7032783 | None:intergenic | 45.0% |
CTTATGAAACGTCTGCATGG+AGG | - | chr7_4:7032954-7032973 | Msa1137970:intron | 45.0% | |
!! | TGCTCTGAAATGGGAAGAAG+TGG | - | chr7_4:7033390-7033409 | Msa1137970:intron | 45.0% |
CTTGGAAGATGGTAGTACAC+TGG | - | chr7_4:7033432-7033451 | Msa1137970:intron | 45.0% | |
! | ATGCTTCTGTTTGAAACCCG+AGG | - | chr7_4:7033620-7033639 | Msa1137970:intron | 45.0% |
! | TGCTTCTGTTTGAAACCCGA+GGG | - | chr7_4:7033621-7033640 | Msa1137970:intron | 45.0% |
TCAGCTAGATGTTTGGGCAA+AGG | - | chr7_4:7034330-7034349 | Msa1137970:CDS | 45.0% | |
GCAAAGGAAAGAGAAGTTGC+TGG | - | chr7_4:7034346-7034365 | Msa1137970:CDS | 45.0% | |
ATCTTCGGCTTCTTTCCTCT+CGG | + | chr7_4:7034431-7034450 | None:intergenic | 45.0% | |
!! | TGCAGGATGCTGCTTCATTT+TGG | - | chr7_4:7034864-7034883 | Msa1137970:CDS | 45.0% |
TAAAGCATACTCCCTTGCAG+TGG | + | chr7_4:7034903-7034922 | None:intergenic | 45.0% | |
TCAACAACAGCAGAACATGC+TGG | + | chr7_4:7034938-7034957 | None:intergenic | 45.0% | |
! | GTGAAGAAGGAAGCATGTAG+AGG | + | chr7_4:7035030-7035049 | None:intergenic | 45.0% |
AAGGAAAATACAATGGGGGG+TGG | - | chr7_4:7035309-7035328 | Msa1137970:intron | 45.0% | |
!! | GCAAGAGACTTTCTGAAGCT+CGG | - | chr7_4:7035488-7035507 | Msa1137970:intron | 45.0% |
GCTGGCTAAGGAAATTACTG+AGG | - | chr7_4:7035520-7035539 | Msa1137970:intron | 45.0% | |
TTGCATGTGAGAGAAGTGGT+TGG | - | chr7_4:7035589-7035608 | Msa1137970:intron | 45.0% | |
TGCATGTGAGAGAAGTGGTT+GGG | - | chr7_4:7035590-7035609 | Msa1137970:intron | 45.0% | |
CATGGGACAGAGCAAAACAA+GGG | + | chr7_4:7035720-7035739 | None:intergenic | 45.0% | |
TCATGGGACAGAGCAAAACA+AGG | + | chr7_4:7035721-7035740 | None:intergenic | 45.0% | |
!!! | GCTATTTTGACAGCAAGAGC+CGG | - | chr7_4:7036013-7036032 | Msa1137970:intron | 45.0% |
! | ATTGGGGGTATGCATATACG+TGG | - | chr7_4:7036410-7036429 | Msa1137970:intron | 45.0% |
! | TTGGGGGTATGCATATACGT+GGG | - | chr7_4:7036411-7036430 | Msa1137970:intron | 45.0% |
GACGTTTCAAGCAAAACTCC+AGG | + | chr7_4:7036524-7036543 | None:intergenic | 45.0% | |
! | GAGTTTTGCTTGAAACGTCG+TGG | - | chr7_4:7036525-7036544 | Msa1137970:intron | 45.0% |
GCACAAGATCCCGTCTAATA+TGG | + | chr7_4:7036599-7036618 | None:intergenic | 45.0% | |
TGACTGTAGGTAGGATTTGG+GGG | + | chr7_4:7036693-7036712 | None:intergenic | 45.0% | |
CCATGACTGTAGGTAGGATT+TGG | + | chr7_4:7036696-7036715 | None:intergenic | 45.0% | |
CCAAATCCTACCTACAGTCA+TGG | - | chr7_4:7036693-7036712 | Msa1137970:intron | 45.0% | |
TGCTTAGCAGAAGTTGCATC+AGG | + | chr7_4:7037059-7037078 | None:intergenic | 45.0% | |
TTCTTCTGCAGCTTGATGAG+TGG | - | chr7_4:7037211-7037230 | Msa1137970:CDS | 45.0% | |
!!! | AATTAAATGAATTTTAATTT+AGG | - | chr7_4:7033524-7033543 | Msa1137970:intron | 5.0% |
!! | TATATTAAAAAATTTATAGT+AGG | - | chr7_4:7034053-7034072 | Msa1137970:CDS | 5.0% |
!! | ATATTAAAAAATTTATAGTA+GGG | - | chr7_4:7034054-7034073 | Msa1137970:CDS | 5.0% |
!! | TCTGATAGTGGATGGTGGAG+TGG | + | chr7_4:7029524-7029543 | None:intergenic | 50.0% |
ATCTCGGCTTAGTCGCTTCT+TGG | - | chr7_4:7029579-7029598 | Msa1137970:intron | 50.0% | |
! | AGCCATTCGAGTATCGCTTC+CGG | + | chr7_4:7029752-7029771 | None:intergenic | 50.0% |
! | CGGTGAATGCGATTTTCCTC+CGG | + | chr7_4:7029822-7029841 | None:intergenic | 50.0% |
TCGATCCGAAAAATCTGCCG+TGG | - | chr7_4:7029851-7029870 | Msa1137970:intron | 50.0% | |
CGATCCGAAAAATCTGCCGT+GGG | - | chr7_4:7029852-7029871 | Msa1137970:intron | 50.0% | |
GTGGGAACATGATTCCGGTA+TGG | - | chr7_4:7029870-7029889 | Msa1137970:intron | 50.0% | |
CGAAATCGGAGAAGACGGTT+AGG | - | chr7_4:7029912-7029931 | Msa1137970:intron | 50.0% | |
AGACGGTTAGGAATGTGAGG+AGG | - | chr7_4:7029924-7029943 | Msa1137970:intron | 50.0% | |
! | TGCGTTGATGGAGAGGGATT+CGG | - | chr7_4:7030021-7030040 | Msa1137970:intron | 50.0% |
AGAAGGAGGTTGAGAGGTTG+AGG | - | chr7_4:7030047-7030066 | Msa1137970:CDS | 50.0% | |
GGAATGTTGTGAGGAGACAG+AGG | - | chr7_4:7030068-7030087 | Msa1137970:CDS | 50.0% | |
TGTTGTGAGGAGACAGAGGA+AGG | - | chr7_4:7030072-7030091 | Msa1137970:CDS | 50.0% | |
GAGGATGCTAGAGGTTTCGA+GGG | - | chr7_4:7030105-7030124 | Msa1137970:CDS | 50.0% | |
AGAGGTTTCGAGGGAAGAAG+CGG | - | chr7_4:7030114-7030133 | Msa1137970:CDS | 50.0% | |
TGTTGTTCGAGACGGAGTGT+TGG | - | chr7_4:7030396-7030415 | Msa1137970:CDS | 50.0% | |
! | GTTGTTCGAGACGGAGTGTT+GGG | - | chr7_4:7030397-7030416 | Msa1137970:CDS | 50.0% |
! | AGTGTTGGGCGGTAAAGAAC+CGG | - | chr7_4:7030411-7030430 | Msa1137970:CDS | 50.0% |
CAGAGATGAGGATGCTGCAT+TGG | - | chr7_4:7030454-7030473 | Msa1137970:CDS | 50.0% | |
AGGATGCTGCATTGGATGTG+TGG | - | chr7_4:7030462-7030481 | Msa1137970:CDS | 50.0% | |
GGATGCTGCATTGGATGTGT+GGG | - | chr7_4:7030463-7030482 | Msa1137970:CDS | 50.0% | |
GGATGTGTGGGAAGACTAGA+CGG | - | chr7_4:7030475-7030494 | Msa1137970:CDS | 50.0% | |
GGAGCCAAATCACTAGAGGT+AGG | - | chr7_4:7030641-7030660 | Msa1137970:intron | 50.0% | |
TTCCGAGATGTCAGTGTCAC+CGG | + | chr7_4:7031398-7031417 | None:intergenic | 50.0% | |
TTTCGACTACCAAAGCCAGC+AGG | + | chr7_4:7031508-7031527 | None:intergenic | 50.0% | |
TGGGTTCGTTACCATTCTGC+AGG | - | chr7_4:7031759-7031778 | Msa1137970:intron | 50.0% | |
GCAAGGGATGCTCAAAGATC+AGG | - | chr7_4:7031881-7031900 | Msa1137970:intron | 50.0% | |
GAGTCCTCCCCTATTACTTC+AGG | - | chr7_4:7032213-7032232 | Msa1137970:intron | 50.0% | |
GAGCTGATGCAGAGATCTTG+AGG | - | chr7_4:7032302-7032321 | Msa1137970:intron | 50.0% | |
GGAGCCACGTCTCAAAATGT+TGG | - | chr7_4:7033002-7033021 | Msa1137970:intron | 50.0% | |
TGGTTCCCTGTTTGGATCCT+AGG | - | chr7_4:7034624-7034643 | Msa1137970:intron | 50.0% | |
GAATACCATTAAGGCCCGGT+AGG | + | chr7_4:7034752-7034771 | None:intergenic | 50.0% | |
GAGTCACATGCACGACTTGA+GGG | + | chr7_4:7034779-7034798 | None:intergenic | 50.0% | |
TCAGCAACCATCCACTGCAA+GGG | - | chr7_4:7034889-7034908 | Msa1137970:CDS | 50.0% | |
CATGCTTCCTTCTTCACCAC+AGG | - | chr7_4:7035033-7035052 | Msa1137970:CDS | 50.0% | |
AAGTGGTTGGGTGAGAGAGT+TGG | - | chr7_4:7035602-7035621 | Msa1137970:intron | 50.0% | |
AGTGGTTGGGTGAGAGAGTT+GGG | - | chr7_4:7035603-7035622 | Msa1137970:intron | 50.0% | |
TTCCTGTCCAGATGATCCAC+TGG | + | chr7_4:7035966-7035985 | None:intergenic | 50.0% | |
GCTGAGACCCGACATATTGA+TGG | + | chr7_4:7036061-7036080 | None:intergenic | 50.0% | |
TCAGACATCTGTGATAGGGG+TGG | + | chr7_4:7036160-7036179 | None:intergenic | 50.0% | |
TTCTTAATGCGCAGGCTTGG+AGG | - | chr7_4:7036464-7036483 | Msa1137970:intron | 50.0% | |
TCTTAATGCGCAGGCTTGGA+GGG | - | chr7_4:7036465-7036484 | Msa1137970:intron | 50.0% | |
AAACTCCAGGGACTCCAGTA+CGG | + | chr7_4:7036511-7036530 | None:intergenic | 50.0% | |
AGACGGGATCTTGTGCAAAG+TGG | - | chr7_4:7036603-7036622 | Msa1137970:intron | 50.0% | |
TGGTTGCCTGAACTCAAGAC+TGG | - | chr7_4:7036913-7036932 | Msa1137970:CDS | 50.0% | |
TTCTGCAGCTTGATGAGTGG+TGG | - | chr7_4:7037214-7037233 | Msa1137970:CDS | 50.0% | |
TCTGCAGCTTGATGAGTGGT+GGG | - | chr7_4:7037215-7037234 | Msa1137970:CDS | 50.0% | |
GGCTTAGTCGCTTCTTGGAC+CGG | - | chr7_4:7029584-7029603 | Msa1137970:intron | 55.0% | |
TCGCTTCTTGGACCGGATAC+CGG | - | chr7_4:7029591-7029610 | Msa1137970:intron | 55.0% | |
ACAATCTGCATCGCCGTCAC+CGG | - | chr7_4:7029730-7029749 | Msa1137970:CDS | 55.0% | |
! | TCGAGTATCGCTTCCGGTGA+CGG | + | chr7_4:7029746-7029765 | None:intergenic | 55.0% |
CACCGGAAGCGATACTCGAA+TGG | - | chr7_4:7029747-7029766 | Msa1137970:CDS | 55.0% | |
CTGCCGTGGGAACATGATTC+CGG | - | chr7_4:7029865-7029884 | Msa1137970:intron | 55.0% | |
CCTCGTAACGCGTGCGAAAT+CGG | - | chr7_4:7029898-7029917 | Msa1137970:intron | 55.0% | |
GCGTGCGAAATCGGAGAAGA+CGG | - | chr7_4:7029907-7029926 | Msa1137970:intron | 55.0% | |
GAAGGAGAAGAGAGAAGGGG+AGG | - | chr7_4:7029988-7030007 | Msa1137970:intron | 55.0% | |
GAAGAGAGAAGGGGAGGAAG+TGG | - | chr7_4:7029994-7030013 | Msa1137970:intron | 55.0% | |
GGAAGTGGAGGTTGCGTTGA+TGG | - | chr7_4:7030009-7030028 | Msa1137970:intron | 55.0% | |
! | TGGAGGTTGCGTTGATGGAG+AGG | - | chr7_4:7030014-7030033 | Msa1137970:intron | 55.0% |
! | GGAGGTTGCGTTGATGGAGA+GGG | - | chr7_4:7030015-7030034 | Msa1137970:intron | 55.0% |
!! | GGAGAGGGATTCGGTGAAGA+AGG | - | chr7_4:7030030-7030049 | Msa1137970:intron | 55.0% |
!! | GAGGGATTCGGTGAAGAAGG+AGG | - | chr7_4:7030033-7030052 | Msa1137970:intron | 55.0% |
CGGTGAAGAAGGAGGTTGAG+AGG | - | chr7_4:7030041-7030060 | Msa1137970:intron | 55.0% | |
CGAGGATGCTAGAGGTTTCG+AGG | - | chr7_4:7030104-7030123 | Msa1137970:CDS | 55.0% | |
TTTCGAGGGAAGAAGCGGAG+AGG | - | chr7_4:7030119-7030138 | Msa1137970:CDS | 55.0% | |
TCGGACAGTGGTAAGACTGG+CGG | - | chr7_4:7030373-7030392 | Msa1137970:CDS | 55.0% | |
!! | ACTGGCGGTGTTGTTCGAGA+CGG | - | chr7_4:7030388-7030407 | Msa1137970:CDS | 55.0% |
GAGGGGAGCCAAATCACTAG+AGG | - | chr7_4:7030637-7030656 | Msa1137970:intron | 55.0% | |
GAATCGTCCAATGCCATCCC+TGG | - | chr7_4:7031104-7031123 | Msa1137970:intron | 55.0% | |
TGCCGGTGACACTGACATCT+CGG | - | chr7_4:7031393-7031412 | Msa1137970:intron | 55.0% | |
GGATGCTCAAAGATCAGGCG+TGG | - | chr7_4:7031886-7031905 | Msa1137970:intron | 55.0% | |
ACGCCACTTCCTTCGTAAGC+AGG | + | chr7_4:7032097-7032116 | None:intergenic | 55.0% | |
AGCTTCGCTGCTTCTGCTTG+AGG | + | chr7_4:7032130-7032149 | None:intergenic | 55.0% | |
TCAAGCAGAAGCAGCGAAGC+TGG | - | chr7_4:7032129-7032148 | Msa1137970:CDS | 55.0% | |
CAAGCAGAAGCAGCGAAGCT+GGG | - | chr7_4:7032130-7032149 | Msa1137970:CDS | 55.0% | |
AAGCAGAAGCAGCGAAGCTG+GGG | - | chr7_4:7032131-7032150 | Msa1137970:CDS | 55.0% | |
! | TGATGGGCAGATTCCGGATG+AGG | - | chr7_4:7032162-7032181 | Msa1137970:intron | 55.0% |
AGGAGAGCTCCCATCAGAAG+AGG | + | chr7_4:7032693-7032712 | None:intergenic | 55.0% | |
CTGTTCCTACCGGGCCTTAA+TGG | - | chr7_4:7034744-7034763 | Msa1137970:CDS | 55.0% | |
GGAGTCACATGCACGACTTG+AGG | + | chr7_4:7034780-7034799 | None:intergenic | 55.0% | |
GTCAGCAACCATCCACTGCA+AGG | - | chr7_4:7034888-7034907 | Msa1137970:CDS | 55.0% | |
GCATACTCCCTTGCAGTGGA+TGG | + | chr7_4:7034899-7034918 | None:intergenic | 55.0% | |
! | GAAGCTCGGTGAGTTTGAGC+TGG | - | chr7_4:7035502-7035521 | Msa1137970:intron | 55.0% |
CGGTGAGTTTGAGCTGGCTA+AGG | - | chr7_4:7035508-7035527 | Msa1137970:intron | 55.0% | |
GTGAGAGAGTTGGGAGTGAG+AGG | - | chr7_4:7035612-7035631 | Msa1137970:intron | 55.0% | |
! | TCTGGTTCAGGCACTGCTTG+AGG | - | chr7_4:7035931-7035950 | Msa1137970:intron | 55.0% |
AGATGATCCACTGGACCCGA+TGG | + | chr7_4:7035957-7035976 | None:intergenic | 55.0% | |
ATCGGGTCCAGTGGATCATC+TGG | - | chr7_4:7035956-7035975 | Msa1137970:intron | 55.0% | |
GTCCAGTGGATCATCTGGAC+AGG | - | chr7_4:7035961-7035980 | Msa1137970:intron | 55.0% | |
GCTGCACTTCAGTATGCTGC+TGG | - | chr7_4:7036079-7036098 | Msa1137970:intron | 55.0% | |
GCACTTCAGTATGCTGCTGG+TGG | - | chr7_4:7036082-7036101 | Msa1137970:intron | 55.0% | |
!! | ATAGGGGTGGACTGTGCACT+AGG | + | chr7_4:7036147-7036166 | None:intergenic | 55.0% |
! | TCTGATATGGAGGCATGCCC+AGG | - | chr7_4:7036175-7036194 | Msa1137970:intron | 55.0% |
! | ATATGGAGGCATGCCCAGGA+TGG | - | chr7_4:7036179-7036198 | Msa1137970:intron | 55.0% |
! | TGCTGGTCTAGCATCCGTAC+TGG | - | chr7_4:7036494-7036513 | Msa1137970:intron | 55.0% |
! | TGATGAGTGGTGGGAGCAAC+CGG | - | chr7_4:7037224-7037243 | Msa1137970:CDS | 55.0% |
TCGACTGGGTGACAGTGGAT+GGG | - | chr7_4:7037259-7037278 | Msa1137970:CDS | 55.0% | |
! | ATGCGATTTTCCTCCGGCGC+CGG | + | chr7_4:7029816-7029835 | None:intergenic | 60.0% |
CCGATTTCGCACGCGTTACG+AGG | + | chr7_4:7029901-7029920 | None:intergenic | 60.0% | |
ACGGTTCACGGTGAAGGGGA+TGG | - | chr7_4:7029953-7029972 | Msa1137970:intron | 60.0% | |
GTTCACGGTGAAGGGGATGG+TGG | - | chr7_4:7029956-7029975 | Msa1137970:intron | 60.0% | |
! | ACGGTGAAGGGGATGGTGGT+GGG | - | chr7_4:7029960-7029979 | Msa1137970:intron | 60.0% |
!! | GGATGGTGGTGGGAGGAAGA+AGG | - | chr7_4:7029970-7029989 | Msa1137970:intron | 60.0% |
GAGAGAAGGGGAGGAAGTGG+AGG | - | chr7_4:7029997-7030016 | Msa1137970:intron | 60.0% | |
GGGAAGAAGCGGAGAGGAAG+AGG | - | chr7_4:7030125-7030144 | Msa1137970:CDS | 60.0% | |
!! | GTTCGAGACGGAGTGTTGGG+CGG | - | chr7_4:7030400-7030419 | Msa1137970:CDS | 60.0% |
! | CAGGCACTGCTTGAGGCCAT+CGG | - | chr7_4:7035938-7035957 | Msa1137970:intron | 60.0% |
! | AGGCACTGCTTGAGGCCATC+GGG | - | chr7_4:7035939-7035958 | Msa1137970:intron | 60.0% |
TGACAGCAAGAGCCGGTGCT+CGG | - | chr7_4:7036020-7036039 | Msa1137970:intron | 60.0% | |
GGCTTGGAGGGTTCAGATGC+TGG | - | chr7_4:7036477-7036496 | Msa1137970:intron | 60.0% | |
AGCATCCGTACTGGAGTCCC+TGG | - | chr7_4:7036503-7036522 | Msa1137970:intron | 60.0% | |
CAGTCGACAACCGTCGATGC+CGG | + | chr7_4:7037246-7037265 | None:intergenic | 60.0% | |
!! | GGCATCGACGGTTGTCGACT+GGG | - | chr7_4:7037245-7037264 | Msa1137970:CDS | 60.0% |
! | GGTTGTCGACTGGGTGACAG+TGG | - | chr7_4:7037254-7037273 | Msa1137970:CDS | 60.0% |
GTCGACTGGGTGACAGTGGA+TGG | - | chr7_4:7037258-7037277 | Msa1137970:CDS | 60.0% | |
GGCTGCTTCACAGCAACTCG+AGG | + | chr7_4:7037460-7037479 | None:intergenic | 60.0% | |
! | CACGGTGAAGGGGATGGTGG+TGG | - | chr7_4:7029959-7029978 | Msa1137970:intron | 65.0% |
!! | GTGAAGGGGATGGTGGTGGG+AGG | - | chr7_4:7029963-7029982 | Msa1137970:intron | 65.0% |
CTTGGGGCTGATGTGCCTCC+AGG | - | chr7_4:7032743-7032762 | Msa1137970:intron | 65.0% | |
CTTGAGGCCATCGGGTCCAG+TGG | - | chr7_4:7035947-7035966 | Msa1137970:intron | 65.0% | |
GACAGCAAGAGCCGGTGCTC+GGG | - | chr7_4:7036021-7036040 | Msa1137970:intron | 65.0% | |
! | GTGGGAGCAACCGGCATCGA+CGG | - | chr7_4:7037233-7037252 | Msa1137970:CDS | 65.0% |
!! | CGGCATCGACGGTTGTCGAC+TGG | - | chr7_4:7037244-7037263 | Msa1137970:CDS | 65.0% |
CCACTCGGCCAATACGCCGC+CGG | - | chr7_4:7029794-7029813 | Msa1137970:intron | 70.0% | |
!! | CGATTTTCCTCCGGCGCCGG+CGG | + | chr7_4:7029813-7029832 | None:intergenic | 70.0% |
GGGGCTGATGTGCCTCCAGG+AGG | - | chr7_4:7032746-7032765 | Msa1137970:intron | 70.0% | |
AGCCGGTGCTCGGGATCCGT+CGG | - | chr7_4:7036030-7036049 | Msa1137970:intron | 70.0% | |
TGCCGACGGATCCCGAGCAC+CGG | + | chr7_4:7036035-7036054 | None:intergenic | 70.0% | |
! | CCGGCGGCGTATTGGCCGAG+TGG | + | chr7_4:7029797-7029816 | None:intergenic | 75.0% |
! | GGCCAATACGCCGCCGGCGC+CGG | - | chr7_4:7029800-7029819 | Msa1137970:intron | 80.0% |
!!! | CTCCGGCGCCGGCGGCGTAT+TGG | + | chr7_4:7029805-7029824 | None:intergenic | 80.0% |
!! | CAATACGCCGCCGGCGCCGG+AGG | - | chr7_4:7029803-7029822 | Msa1137970:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 7029393 | 7037639 | 7029393 | ID=Msa1137970;Name=Msa1137970 |
chr7_4 | mRNA | 7029393 | 7037639 | 7029393 | ID=Msa1137970-mRNA-1;Parent=Msa1137970;Name=Msa1137970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=332|0.9|0.81|1|1|1|11|0|838 |
chr7_4 | exon | 7029393 | 7029591 | 7029393 | ID=Msa1137970-mRNA-1:exon:1985;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7029683 | 7029810 | 7029683 | ID=Msa1137970-mRNA-1:exon:1984;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7030045 | 7030177 | 7030045 | ID=Msa1137970-mRNA-1:exon:1983;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7030359 | 7030554 | 7030359 | ID=Msa1137970-mRNA-1:exon:1982;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7030929 | 7031091 | 7030929 | ID=Msa1137970-mRNA-1:exon:1981;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7031978 | 7032163 | 7031978 | ID=Msa1137970-mRNA-1:exon:1980;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7032489 | 7032698 | 7032489 | ID=Msa1137970-mRNA-1:exon:1979;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7033989 | 7034156 | 7033989 | ID=Msa1137970-mRNA-1:exon:1978;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7034236 | 7034377 | 7034236 | ID=Msa1137970-mRNA-1:exon:1977;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7034709 | 7035251 | 7034709 | ID=Msa1137970-mRNA-1:exon:1976;Parent=Msa1137970-mRNA-1 |
chr7_4 | exon | 7036859 | 7037639 | 7036859 | ID=Msa1137970-mRNA-1:exon:1975;Parent=Msa1137970-mRNA-1 |
chr7_4 | five_prime_UTR | 7037308 | 7037639 | 7037308 | ID=Msa1137970-mRNA-1:five_prime_utr;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7036859 | 7037307 | 7036859 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7034709 | 7035251 | 7034709 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7034236 | 7034377 | 7034236 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7033989 | 7034156 | 7033989 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7032489 | 7032698 | 7032489 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7031978 | 7032163 | 7031978 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7030929 | 7031091 | 7030929 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7030359 | 7030554 | 7030359 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7030045 | 7030177 | 7030045 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7029683 | 7029810 | 7029683 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
chr7_4 | CDS | 7029393 | 7029591 | 7029393 | ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1 |
Gene Sequence |
Protein sequence |