AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1137970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137970 MtrunA17_Chr7g0220231 97.935 775 13 2 1 773 1 774 0.0 1555
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137970 AT5G38880.1 69.987 793 210 6 4 772 6 794 0.0 1114

Find 225 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTACAGTATCCACTTTA+TGG 0.131855 7_4:-7034300 Msa1137970:CDS
GTTAGTTATGTTATGTTTAA+TGG 0.182783 7_4:+7037461 None:intergenic
ATCTCGGCTTAGTCGCTTCT+TGG 0.189413 7_4:-7037431 Msa1137970:five_prime_UTR
TATAGTAACAGAGACGTTTA+TGG 0.205757 7_4:+7035160 None:intergenic
TCTGATTAGTGACTCGTTAT+TGG 0.216819 7_4:-7037387 Msa1137970:five_prime_UTR
TGCAGGATGCTGCTTCATTT+TGG 0.252455 7_4:-7032146 Msa1137970:intron
CAGTAATTGCCTGAAGTAAT+AGG 0.266699 7_4:+7034788 None:intergenic
AAGAGAAGTTGCTGGTTTAA+AGG 0.281025 7_4:-7032656 Msa1137970:CDS
GAAGAGAGAAGGGGAGGAAG+TGG 0.281721 7_4:-7037016 Msa1137970:CDS
TAAGAAGGGGTTATTCTCTT+TGG 0.297881 7_4:+7037535 None:intergenic
TTGATGAACGGGCGAATTAC+AGG 0.306303 7_4:-7036858 Msa1137970:intron
GCACAAGATCCCGTCTAATA+TGG 0.306533 7_4:+7030414 None:intergenic
TGGAAGCTTGCAAATATGTT+TGG 0.312539 7_4:-7030051 Msa1137970:CDS
AGCTGTTTATTCTACTGTTA+AGG 0.323612 7_4:-7035052 Msa1137970:CDS
GGAAGCTTGCAAATATGTTT+GGG 0.327032 7_4:-7030050 Msa1137970:CDS
CATGTATTCAGCTAGATGTT+TGG 0.329091 7_4:-7032687 Msa1137970:intron
GGAAGTGGAGGTTGCGTTGA+TGG 0.329516 7_4:-7037001 Msa1137970:CDS
ATGTATTCAGCTAGATGTTT+GGG 0.331353 7_4:-7032686 Msa1137970:intron
CTCCGGCGCCGGCGGCGTAT+TGG 0.335674 7_4:+7037208 None:intergenic
GTACTTCAAGCATTTACTTT+GGG 0.340628 7_4:-7029529 Msa1137970:CDS
CACGGTGAAGGGGATGGTGG+TGG 0.347298 7_4:-7037051 Msa1137970:CDS
CTTTATGGAAATGGAAAACT+TGG 0.352170 7_4:-7034285 Msa1137970:CDS
CAGTATCCACTTTATGGAAA+TGG 0.356840 7_4:-7034294 Msa1137970:CDS
TGGAAGTCTTAGACAACTTC+AGG 0.363351 7_4:-7033988 Msa1137970:intron
TTTAAGAAGTGCGGTGTATA+TGG 0.370811 7_4:+7032498 None:intergenic
GATGTTACTTCTCGTTCAAT+TGG 0.373150 7_4:-7034029 Msa1137970:CDS
AGTAATTGCCTGAAGTAATA+GGG 0.377154 7_4:+7034789 None:intergenic
CGGCATCGACGGTTGTCGAC+TGG 0.377291 7_4:-7029766 Msa1137970:CDS
CGAATGGCTTCACAAAGAAA+TGG 0.379940 7_4:-7037247 Msa1137970:CDS
TTTGAATGCTCAGCAGAGTT+TGG 0.382937 7_4:-7030071 Msa1137970:CDS
GGAAGAAGGAGAAGAGAGAA+GGG 0.385063 7_4:-7037026 Msa1137970:CDS
TTCTTAATGCGCAGGCTTGG+AGG 0.387723 7_4:-7030546 Msa1137970:intron
GCTGTTTATTCTACTGTTAA+GGG 0.389280 7_4:-7035051 Msa1137970:CDS
TCAAGCAGAAGCAGCGAAGC+TGG 0.397262 7_4:-7034881 Msa1137970:CDS
AAAGTAAATGCTTGAAGTAC+TGG 0.399325 7_4:+7029532 None:intergenic
TCATGCCTACTTTGTTCAAC+AGG 0.399440 7_4:-7030369 Msa1137970:CDS
GGCTTAGTCGCTTCTTGGAC+CGG 0.403530 7_4:-7037426 Msa1137970:five_prime_UTR
GAAGAGGATGCTTGATGAAC+GGG 0.405836 7_4:-7036869 Msa1137970:CDS
AGAAGGAGGTTGAGAGGTTG+AGG 0.408148 7_4:-7036963 Msa1137970:CDS
CGTGGATTCTTCCGTTGAAA+TGG 0.408715 7_4:-7035106 Msa1137970:CDS
GAGTCCTCCCCTATTACTTC+AGG 0.412492 7_4:-7034797 Msa1137970:CDS
GGAGAGGGATTCGGTGAAGA+AGG 0.415697 7_4:-7036980 Msa1137970:CDS
GTAATAGGGGAGGACTCTTT+AGG 0.420923 7_4:+7034803 None:intergenic
TGATGAGTGGTGGGAGCAAC+CGG 0.422273 7_4:-7029786 Msa1137970:CDS
CTGCCGTGGGAACATGATTC+CGG 0.423922 7_4:-7037145 Msa1137970:CDS
AGCATGTAGAGGCTATTATC+TGG 0.424373 7_4:+7031994 None:intergenic
GGCTTGGAGGGTTCAGATGC+TGG 0.426927 7_4:-7030533 Msa1137970:CDS
CAGGCACTGCTTGAGGCCAT+CGG 0.427432 7_4:-7031072 Msa1137970:CDS
ATCGGGTCCAGTGGATCATC+TGG 0.429603 7_4:-7031054 Msa1137970:CDS
ATGGATGTTTCCTCTTCTGA+TGG 0.430234 7_4:-7034330 Msa1137970:CDS
AGTACTTCAAGCATTTACTT+TGG 0.430411 7_4:-7029530 Msa1137970:CDS
TGCGTTGATGGAGAGGGATT+CGG 0.432482 7_4:-7036989 Msa1137970:CDS
GCTGAGACCCGACATATTGA+TGG 0.433205 7_4:+7030952 None:intergenic
GGCCAATACGCCGCCGGCGC+CGG 0.438971 7_4:-7037210 Msa1137970:CDS
TCGCTTCTTGGACCGGATAC+CGG 0.439475 7_4:-7037419 Msa1137970:five_prime_UTR
GATGATCCGGTGTTTGTTGT+TGG 0.439934 7_4:+7037575 None:intergenic
CGCACTTCTTAAAGCAAATA+CGG 0.440398 7_4:-7032488 Msa1137970:intron
GGATGGTGGTGGGAGGAAGA+AGG 0.444216 7_4:-7037040 Msa1137970:CDS
AGGTTTCTTTCTTGTTCTTG+AGG 0.447405 7_4:+7029464 None:intergenic
GAATGTGAGGAGGAATATTA+CGG 0.449349 7_4:-7037076 Msa1137970:CDS
ATATGAAAATAACATAGTTA+TGG 0.453264 7_4:-7034349 Msa1137970:CDS
TGGTTCAGAAGCTAGTGTTT+TGG 0.454086 7_4:-7030465 Msa1137970:CDS
AGGAAGAAGGAGAAGAGAGA+AGG 0.454517 7_4:-7037027 Msa1137970:CDS
AGCTTCGCTGCTTCTGCTTG+AGG 0.455594 7_4:+7034883 None:intergenic
TGATGGGCAGATTCCGGATG+AGG 0.464339 7_4:-7034848 Msa1137970:CDS
AGACTCTTGTATCCGGTATC+CGG 0.465747 7_4:+7037407 None:intergenic
CTTGGGGCTGATGTGCCTCC+AGG 0.466724 7_4:-7034267 Msa1137970:CDS
GGGAAGAAGCGGAGAGGAAG+AGG 0.466854 7_4:-7036885 Msa1137970:CDS
CATGCTTCCTTCTTCACCAC+AGG 0.472095 7_4:-7031977 Msa1137970:intron
TTCTGCAGCTTGATGAGTGG+TGG 0.472825 7_4:-7029796 Msa1137970:intron
ATAACTGTTCTAACCTCATC+CGG 0.473562 7_4:+7034835 None:intergenic
GAATAAAGACCTGTCTTTCA+AGG 0.474678 7_4:+7034226 None:intergenic
GACAGCAAGAGCCGGTGCTC+GGG 0.476775 7_4:-7030989 Msa1137970:CDS
GTTATGTTATGTTTAATGGT+TGG 0.477982 7_4:+7037465 None:intergenic
AAAACACCAGTCTTGAGTTC+AGG 0.477991 7_4:+7030091 None:intergenic
TTAACTCTAATGAGTAAGAA+GGG 0.478353 7_4:+7037521 None:intergenic
GTCGACTGGGTGACAGTGGA+TGG 0.478572 7_4:-7029752 Msa1137970:CDS
AAATCAGCTCCTTGAAAGAC+AGG 0.479838 7_4:-7034235 Msa1137970:intron
TGACAGCAAGAGCCGGTGCT+CGG 0.480202 7_4:-7030990 Msa1137970:CDS
GAAGGAGAAGAGAGAAGGGG+AGG 0.480900 7_4:-7037022 Msa1137970:CDS
TTCATCACATTGGCGGTCAT+AGG 0.482889 7_4:+7035206 None:intergenic
AGGCACTGCTTGAGGCCATC+GGG 0.484747 7_4:-7031071 Msa1137970:CDS
CAAGCAGAAGCAGCGAAGCT+GGG 0.485794 7_4:-7034880 Msa1137970:CDS
TTTAACTCTAATGAGTAAGA+AGG 0.489019 7_4:+7037520 None:intergenic
ATCTTCGGCTTCTTTCCTCT+CGG 0.489665 7_4:+7032582 None:intergenic
TTCAAGCATTTACTTTGGGA+TGG 0.490306 7_4:-7029525 Msa1137970:CDS
GCAAAGGAAAGAGAAGTTGC+TGG 0.490620 7_4:-7032664 Msa1137970:CDS
GTGAAGGGGATGGTGGTGGG+AGG 0.491173 7_4:-7037047 Msa1137970:CDS
GAGAGAAGGGGAGGAAGTGG+AGG 0.492293 7_4:-7037013 Msa1137970:CDS
GCAAGGGATGCTCAAAGATC+AGG 0.494346 7_4:-7035129 Msa1137970:CDS
GCTTCTAACATGTTATGATC+AGG 0.495135 7_4:-7029693 Msa1137970:CDS
TGGATGTTTCCTCTTCTGAT+GGG 0.496110 7_4:-7034329 Msa1137970:CDS
TGCTGGTCTAGCATCCGTAC+TGG 0.496331 7_4:-7030516 Msa1137970:CDS
GGCAATTCCATCAATATGTC+GGG 0.498007 7_4:-7030959 Msa1137970:CDS
ACGCCACTTCCTTCGTAAGC+AGG 0.500417 7_4:+7034916 None:intergenic
TTTCGGATCGATTCGACTGA+CGG 0.501011 7_4:+7037171 None:intergenic
CAATACGCCGCCGGCGCCGG+AGG 0.501014 7_4:-7037207 Msa1137970:CDS
GGCATCGACGGTTGTCGACT+GGG 0.501409 7_4:-7029765 Msa1137970:CDS
GAATGGCTTCACAAAGAAAT+GGG 0.502140 7_4:-7037246 Msa1137970:CDS
GCTGCACTTCAGTATGCTGC+TGG 0.502447 7_4:-7030931 Msa1137970:CDS
TTAATGGTTGGATCTGATAG+TGG 0.503103 7_4:+7037477 None:intergenic
CTTTGTCTTGTGTTGAGTAG+AGG 0.504792 7_4:+7037604 None:intergenic
TTATAAACCTGTGGTGAAGA+AGG 0.508261 7_4:+7031970 None:intergenic
TTAATCTTGTCCATATTAGA+CGG 0.508890 7_4:-7030424 Msa1137970:CDS
TCGAGTATCGCTTCCGGTGA+CGG 0.509073 7_4:+7037267 None:intergenic
TGTTGTGAGGAGACAGAGGA+AGG 0.512237 7_4:-7036938 Msa1137970:CDS
ATATTACGGTTCACGGTGAA+GGG 0.512455 7_4:-7037062 Msa1137970:CDS
CAGGCATAAGCAAGTGATGT+TGG 0.512719 7_4:-7035232 Msa1137970:CDS
TTGCAAATATGTTTGGGGAT+TGG 0.513243 7_4:-7030044 Msa1137970:intron
CGGTGAAGAAGGAGGTTGAG+AGG 0.514023 7_4:-7036969 Msa1137970:CDS
TTTCCTGCTTACGAAGGAAG+TGG 0.514296 7_4:-7034919 Msa1137970:CDS
TCTGCAGCTTGATGAGTGGT+GGG 0.516666 7_4:-7029795 Msa1137970:intron
ATCTTTCTGATGTGATGATC+CGG 0.516949 7_4:+7037562 None:intergenic
AGCCATTCGAGTATCGCTTC+CGG 0.518680 7_4:+7037261 None:intergenic
AATATTACGGTTCACGGTGA+AGG 0.519453 7_4:-7037063 Msa1137970:CDS
TGCCGACGGATCCCGAGCAC+CGG 0.519503 7_4:+7030978 None:intergenic
GGAGGTTGCGTTGATGGAGA+GGG 0.522089 7_4:-7036995 Msa1137970:CDS
GGAATGTTGTGAGGAGACAG+AGG 0.522586 7_4:-7036942 Msa1137970:CDS
CGAAATCGGAGAAGACGGTT+AGG 0.523499 7_4:-7037098 Msa1137970:CDS
CGAGGATGCTAGAGGTTTCG+AGG 0.524771 7_4:-7036906 Msa1137970:CDS
ACAATCTGCATCGCCGTCAC+CGG 0.528251 7_4:-7037280 Msa1137970:CDS
TCGAAGCTTCATCACATTGG+CGG 0.529322 7_4:+7035199 None:intergenic
AGCATCCGTACTGGAGTCCC+TGG 0.531380 7_4:-7030507 Msa1137970:CDS
ACTAATCAGACTCTTGTATC+CGG 0.533357 7_4:+7037400 None:intergenic
CACACTTCTGAAGAGAAAGA+AGG 0.534065 7_4:+7029413 None:intergenic
ATAGTCCTGTTGAACAAAGT+AGG 0.534887 7_4:+7030364 None:intergenic
GTCCAGTGGATCATCTGGAC+AGG 0.537413 7_4:-7031049 Msa1137970:CDS
TGGAGGTTGCGTTGATGGAG+AGG 0.537697 7_4:-7036996 Msa1137970:CDS
TCTTAATGCGCAGGCTTGGA+GGG 0.537896 7_4:-7030545 Msa1137970:intron
TAATCTTGTCCATATTAGAC+GGG 0.538291 7_4:-7030423 Msa1137970:CDS
ACACTTCTGAAGAGAAAGAA+GGG 0.539150 7_4:+7029414 None:intergenic
TGAATCTCTTGTAGCTTACA+TGG 0.539346 7_4:-7034962 Msa1137970:CDS
AAAACTATTTACCATTTCAA+CGG 0.539456 7_4:+7035095 None:intergenic
TTTGTCTTGTGTTGAGTAGA+GGG 0.540267 7_4:+7037605 None:intergenic
GCGTTGTATTTCAGACATCA+AGG 0.541137 7_4:+7032621 None:intergenic
GAAGAAGGAGAAGAGAGAAG+GGG 0.541221 7_4:-7037025 Msa1137970:CDS
CAGTCGACAACCGTCGATGC+CGG 0.544298 7_4:+7029767 None:intergenic
TTCTCGAAGCTTCATCACAT+TGG 0.544752 7_4:+7035196 None:intergenic
GTTACTATATAAATCAAGCA+AGG 0.546325 7_4:-7035146 Msa1137970:CDS
AGGAGGAATATTACGGTTCA+CGG 0.547542 7_4:-7037069 Msa1137970:CDS
GAGGGATTCGGTGAAGAAGG+AGG 0.548565 7_4:-7036977 Msa1137970:CDS
ATAACTAACTAACTCGATCT+CGG 0.550371 7_4:-7037447 Msa1137970:five_prime_UTR
ACGGTGAAGGGGATGGTGGT+GGG 0.550521 7_4:-7037050 Msa1137970:CDS
TCAGCTAGATGTTTGGGCAA+AGG 0.550594 7_4:-7032680 Msa1137970:intron
TTAGTGACTCGTTATTGGAC+CGG 0.550638 7_4:-7037382 Msa1137970:five_prime_UTR
GTTGAGTAGAGGGAAATTGT+TGG 0.553007 7_4:+7037615 None:intergenic
GTGGGAGCAACCGGCATCGA+CGG 0.554649 7_4:-7029777 Msa1137970:CDS
GACGTTTCAAGCAAAACTCC+AGG 0.555173 7_4:+7030489 None:intergenic
TTCTTCTGCAGCTTGATGAG+TGG 0.555882 7_4:-7029799 Msa1137970:intron
TAAACAATGCTGCAGAAGCA+AGG 0.557173 7_4:-7034094 Msa1137970:CDS
TCTGGTTCAGGCACTGCTTG+AGG 0.561058 7_4:-7031079 Msa1137970:intron
TTCCTGTCCAGATGATCCAC+TGG 0.561115 7_4:+7031047 None:intergenic
GCATACTCCCTTGCAGTGGA+TGG 0.563944 7_4:+7032114 None:intergenic
TTTATGGAAATGGAAAACTT+GGG 0.564742 7_4:-7034284 Msa1137970:CDS
CGGCAATTCCATCAATATGT+CGG 0.564930 7_4:-7030960 Msa1137970:CDS
GTCAGCAACCATCCACTGCA+AGG 0.565923 7_4:-7032122 Msa1137970:CDS
GGAGCCACGTCTCAAAATGT+TGG 0.569343 7_4:-7034008 Msa1137970:CDS
TCAACAACAGCAGAACATGC+TGG 0.570268 7_4:+7032075 None:intergenic
GAGCTGATGCAGAGATCTTG+AGG 0.571777 7_4:-7034708 Msa1137970:intron
AAACTTATGAAACGTCTGCA+TGG 0.572224 7_4:-7034059 Msa1137970:CDS
ACGGTTCACGGTGAAGGGGA+TGG 0.572577 7_4:-7037057 Msa1137970:CDS
GAGGGAAAAGAATATTAGAA+AGG 0.573113 7_4:-7034989 Msa1137970:CDS
CTTGAGGCCATCGGGTCCAG+TGG 0.580795 7_4:-7031063 Msa1137970:CDS
CGTATTTGCTTTAAGAAGTG+CGG 0.581014 7_4:+7032489 None:intergenic
AAACTCCAGGGACTCCAGTA+CGG 0.583455 7_4:+7030502 None:intergenic
TTGTTCAACAGGACTATGAA+AGG 0.583997 7_4:-7030358 Msa1137970:intron
TGGTTGCCTGAACTCAAGAC+TGG 0.584766 7_4:-7030097 Msa1137970:CDS
GGAAGAGGATGCTTGATGAA+CGG 0.585097 7_4:-7036870 Msa1137970:CDS
AAACAATGCTGCAGAAGCAA+GGG 0.586745 7_4:-7034093 Msa1137970:CDS
GTGGGAACATGATTCCGGTA+TGG 0.586849 7_4:-7037140 Msa1137970:CDS
TCTGATAGTGGATGGTGGAG+TGG 0.586917 7_4:+7037489 None:intergenic
AGAACAAGAAAGAGCTGTCA+CGG 0.587048 7_4:-7030125 Msa1137970:CDS
AGGAGAGCTCCCATCAGAAG+AGG 0.587302 7_4:+7034320 None:intergenic
GCGTGCGAAATCGGAGAAGA+CGG 0.587591 7_4:-7037103 Msa1137970:CDS
CCATAAAGTGGATACTGTAG+AGG 0.590208 7_4:+7034300 None:intergenic
GAAGCTTGCAAATATGTTTG+GGG 0.591476 7_4:-7030049 Msa1137970:CDS
AGAGGTTTCGAGGGAAGAAG+CGG 0.591929 7_4:-7036896 Msa1137970:CDS
GAGGATGCTAGAGGTTTCGA+GGG 0.592917 7_4:-7036905 Msa1137970:CDS
AAGCAGAAGCAGCGAAGCTG+GGG 0.592988 7_4:-7034879 Msa1137970:CDS
GCATAAGCAAGTGATGTTGG+AGG 0.594477 7_4:-7035229 Msa1137970:CDS
CACCGGAAGCGATACTCGAA+TGG 0.595650 7_4:-7037263 Msa1137970:CDS
TGGTTGGATCTGATAGTGGA+TGG 0.597101 7_4:+7037481 None:intergenic
TGAGACTTCAAATAGTGCAA+AGG 0.605516 7_4:-7032055 Msa1137970:CDS
TTACTATATAAATCAAGCAA+GGG 0.605937 7_4:-7035145 Msa1137970:CDS
GAGTAGAGGGAAATTGTTGG+TGG 0.606278 7_4:+7037618 None:intergenic
AGATGATCCACTGGACCCGA+TGG 0.607871 7_4:+7031056 None:intergenic
TTATGGAAATGGAAAACTTG+GGG 0.612636 7_4:-7034283 Msa1137970:CDS
TCGACTGGGTGACAGTGGAT+GGG 0.613672 7_4:-7029751 Msa1137970:CDS
GTTCACGGTGAAGGGGATGG+TGG 0.622464 7_4:-7037054 Msa1137970:CDS
GGATGCTCAAAGATCAGGCG+TGG 0.622609 7_4:-7035124 Msa1137970:CDS
GTAATTGCCTGAAGTAATAG+GGG 0.623240 7_4:+7034790 None:intergenic
TAACTCTAATGAGTAAGAAG+GGG 0.623288 7_4:+7037522 None:intergenic
ACAACACCAACAACAAACAC+CGG 0.624079 7_4:-7037581 Msa1137970:five_prime_UTR
AGAGGTTGAGGAATGTTGTG+AGG 0.624388 7_4:-7036951 Msa1137970:CDS
GGCTGCTTCACAGCAACTCG+AGG 0.627593 7_4:+7029553 None:intergenic
CCGGCGGCGTATTGGCCGAG+TGG 0.630885 7_4:+7037216 None:intergenic
GCACTTCAGTATGCTGCTGG+TGG 0.632432 7_4:-7030928 Msa1137970:intron
CACTTCTGAAGAGAAAGAAG+GGG 0.633656 7_4:+7029415 None:intergenic
TTTGAAAGCGAGGATGCTAG+AGG 0.637353 7_4:-7036914 Msa1137970:CDS
TTGGATCTGATAGTGGATGG+TGG 0.637400 7_4:+7037484 None:intergenic
CATATTGATGGAATTGCCGA+CGG 0.639784 7_4:+7030964 None:intergenic
TCAGCAACCATCCACTGCAA+GGG 0.641538 7_4:-7032121 Msa1137970:CDS
GTGAAGAAGGAAGCATGTAG+AGG 0.641857 7_4:+7031983 None:intergenic
ATACCGGAATCATGTTCCCA+CGG 0.646015 7_4:+7037142 None:intergenic
AGACGGTTAGGAATGTGAGG+AGG 0.646417 7_4:-7037086 Msa1137970:CDS
AGAGGAAGGATTTGAAAGCG+AGG 0.646849 7_4:-7036924 Msa1137970:CDS
TATTACGGTTCACGGTGAAG+GGG 0.647653 7_4:-7037061 Msa1137970:CDS
AGACGGGATCTTGTGCAAAG+TGG 0.651848 7_4:-7030407 Msa1137970:CDS
TAAAGCATACTCCCTTGCAG+TGG 0.652047 7_4:+7032110 None:intergenic
GAAATGGGATACAGACCACT+CGG 0.655763 7_4:-7037231 Msa1137970:CDS
AGAAGACGGTTAGGAATGTG+AGG 0.658381 7_4:-7037089 Msa1137970:CDS
TTTCGAGGGAAGAAGCGGAG+AGG 0.668597 7_4:-7036891 Msa1137970:CDS
TGCAAATGCAGAAATAAGTG+CGG 0.669100 7_4:-7031019 Msa1137970:CDS
GGTTGTCGACTGGGTGACAG+TGG 0.670105 7_4:-7029756 Msa1137970:CDS
ATTGCCTGAAGTAATAGGGG+AGG 0.671022 7_4:+7034793 None:intergenic
ACGAGTTTAACTCAGTGACT+CGG 0.671811 7_4:+7037328 None:intergenic
ACGTTTCAAGCAAAACTCCA+GGG 0.675911 7_4:+7030490 None:intergenic
GTTACGAGGAAATTCCATAC+CGG 0.676098 7_4:+7037126 None:intergenic
GGGGCTGATGTGCCTCCAGG+AGG 0.680711 7_4:-7034264 Msa1137970:CDS
AAAGTAGGCATGATTCAACA+AGG 0.689759 7_4:+7030379 None:intergenic
ACTTCTGAAGAGAAAGAAGG+GGG 0.704062 7_4:+7029416 None:intergenic
CTTATGAAACGTCTGCATGG+AGG 0.715108 7_4:-7034056 Msa1137970:CDS
TGAATAAGTTATGTGCCGAG+AGG 0.730094 7_4:-7032597 Msa1137970:CDS
CATTGTCATTGAAACCACGA+GGG 0.732985 7_4:-7035007 Msa1137970:CDS
TCATTGTCATTGAAACCACG+AGG 0.733906 7_4:-7035008 Msa1137970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTTATAGTGAATT+AGG - chr7_4:7033054-7033073 Msa1137970:intron 10.0%
!!! CAATTTTTATATATTTTTGT+TGG - chr7_4:7033226-7033245 Msa1137970:intron 10.0%
!! TAAGTTCAATTAAATTATTT+AGG - chr7_4:7034131-7034150 Msa1137970:CDS 10.0%
!!! GAATTGAAAATATTTTATAA+CGG + chr7_4:7036306-7036325 None:intergenic 10.0%
!! AATTTAGTAAATTCATTTAT+AGG - chr7_4:7036721-7036740 Msa1137970:intron 10.0%
!! TTAGTTAAGTTAAAAAAACT+CGG + chr7_4:7029657-7029676 None:intergenic 15.0%
!! ATAATAGACTATAAAGTTAT+TGG - chr7_4:7030844-7030863 Msa1137970:intron 15.0%
!!! TTTGTGACTATAATTTTTTA+AGG - chr7_4:7032381-7032400 Msa1137970:intron 15.0%
!! ATTTACAAAGAATTTAAAAG+AGG - chr7_4:7032485-7032504 Msa1137970:intron 15.0%
!! ATATGAAAATAACATAGTTA+TGG - chr7_4:7032661-7032680 Msa1137970:CDS 15.0%
!!! TATATTTAACTTGCTTAAAA+AGG + chr7_4:7033081-7033100 None:intergenic 15.0%
!!! ATTTTTTTTGATATAGTTCA+TGG - chr7_4:7033894-7033913 Msa1137970:intron 15.0%
!!! TTTTTTTTGATATAGTTCAT+GGG - chr7_4:7033895-7033914 Msa1137970:intron 15.0%
!!! ATTTTCATAATTAAACATGT+CGG + chr7_4:7034026-7034045 None:intergenic 15.0%
!!! ATATTTCTAGCATTAATAAT+TGG + chr7_4:7034257-7034276 None:intergenic 15.0%
!!! TCTTTTTACATCAAAATTTA+TGG - chr7_4:7034276-7034295 Msa1137970:CDS 15.0%
!! TTCATTAATTTCTGTATTTA+TGG - chr7_4:7034559-7034578 Msa1137970:intron 15.0%
!!! TTTCCCTTTTTTTTTATAAA+CGG - chr7_4:7034814-7034833 Msa1137970:CDS 15.0%
!! AAACCGTTTATAAAAAAAAA+GGG + chr7_4:7034820-7034839 None:intergenic 15.0%
!!! TTATTTGATTTGCTAAAAAA+AGG + chr7_4:7035793-7035812 None:intergenic 15.0%
!! CTTATATTTATCATATATTC+TGG - chr7_4:7035913-7035932 Msa1137970:intron 15.0%
!! GTTAGTTATGTTATGTTTAA+TGG + chr7_4:7029552-7029571 None:intergenic 20.0%
!! AACTAGAAAACATCAAAATT+AGG + chr7_4:7030198-7030217 None:intergenic 20.0%
!! ATAAACTATGAAGTTATTGA+AGG - chr7_4:7030335-7030354 Msa1137970:intron 20.0%
!! TAAACTATGAAGTTATTGAA+GGG - chr7_4:7030336-7030355 Msa1137970:intron 20.0%
!! TATAAGAGATACTATTAAGA+AGG - chr7_4:7030681-7030700 Msa1137970:intron 20.0%
!! TGTATCAATGATATATTTGA+AGG - chr7_4:7031676-7031695 Msa1137970:intron 20.0%
!! TTACTATATAAATCAAGCAA+GGG - chr7_4:7031865-7031884 Msa1137970:intron 20.0%
!! AAAACTATTTACCATTTCAA+CGG + chr7_4:7031918-7031937 None:intergenic 20.0%
!!! TGACTATAATTTTTTAAGGT+TGG - chr7_4:7032385-7032404 Msa1137970:intron 20.0%
!!! TCTTTGTAAATTTAGCATTT+TGG + chr7_4:7032476-7032495 None:intergenic 20.0%
!! TAATTGAAAATATGCAAGTT+TGG + chr7_4:7032634-7032653 None:intergenic 20.0%
!!! AAACTTGCATATTTTCAATT+AGG - chr7_4:7032633-7032652 Msa1137970:CDS 20.0%
!!! TTTTTGCTTAAATATAGAAC+TGG + chr7_4:7033177-7033196 None:intergenic 20.0%
!!! AATGTGTTATTGAAAATAGT+AGG - chr7_4:7033474-7033493 Msa1137970:intron 20.0%
!!! TTTTTATGACAAATTACCTT+TGG - chr7_4:7033794-7033813 Msa1137970:intron 20.0%
!!! TTTCACATCTAATTATTTTG+AGG - chr7_4:7033824-7033843 Msa1137970:intron 20.0%
!! AATTATCAAATCAGATTTAC+AGG + chr7_4:7033853-7033872 None:intergenic 20.0%
!!! TTTTTTTGATATAGTTCATG+GGG - chr7_4:7033896-7033915 Msa1137970:intron 20.0%
!!! GGTTTTAATTCAATTTTACT+GGG + chr7_4:7033944-7033963 None:intergenic 20.0%
!! TAAAATTGAATTAAAACCCA+GGG - chr7_4:7033946-7033965 Msa1137970:intron 20.0%
!!! TTTTCATAATTAAACATGTC+GGG + chr7_4:7034025-7034044 None:intergenic 20.0%
!! TAAAAAATTTATAGTAGGGT+AGG - chr7_4:7034058-7034077 Msa1137970:CDS 20.0%
!!! AGAGTATTGGAAAATAAAAA+CGG + chr7_4:7034159-7034178 None:intergenic 20.0%
!!! TTTTACATCAAAATTTATGG+AGG - chr7_4:7034279-7034298 Msa1137970:CDS 20.0%
!!! TTGTTATTTGATATATGTAC+TGG - chr7_4:7034682-7034701 Msa1137970:intron 20.0%
!! CAAACCGTTTATAAAAAAAA+AGG + chr7_4:7034821-7034840 None:intergenic 20.0%
!!! TTTGTTTTCTTATATATTGC+AGG - chr7_4:7034847-7034866 Msa1137970:CDS 20.0%
!! GAGTTATATTTAAATGAACT+CGG + chr7_4:7035221-7035240 None:intergenic 20.0%
!! TAAATATAACTCAAACAGAT+TGG - chr7_4:7035229-7035248 Msa1137970:CDS 20.0%
!! AAATATAACTCAAACAGATT+GGG - chr7_4:7035230-7035249 Msa1137970:CDS 20.0%
!!! TCAATGTTGATTATTAAACA+CGG + chr7_4:7035258-7035277 None:intergenic 20.0%
!! TGTTTAATAATCAACATTGA+TGG - chr7_4:7035258-7035277 Msa1137970:intron 20.0%
!!! TAGAAGTGTATTTTTTACTT+TGG - chr7_4:7035637-7035656 Msa1137970:intron 20.0%
!!! TTGATTTAAAACTTGATCAT+GGG + chr7_4:7035737-7035756 None:intergenic 20.0%
!!! TTTGATTTAAAACTTGATCA+TGG + chr7_4:7035738-7035757 None:intergenic 20.0%
!! AATATGCAATAGTAATATAG+AGG + chr7_4:7036349-7036368 None:intergenic 20.0%
!!! TTTCAAAGGTATTTACTATT+GGG - chr7_4:7036393-7036412 Msa1137970:intron 20.0%
!!! TGTTTTGGAAGATTTATTAA+AGG - chr7_4:7036560-7036579 Msa1137970:intron 20.0%
!! GATATTTAATATAATGATGC+AGG - chr7_4:7036833-7036852 Msa1137970:intron 20.0%
!!! GACCAATTTTTCTTTAAATT+TGG - chr7_4:7036858-7036877 Msa1137970:intron 20.0%
!! TGCCAAATTTAAAGAAAAAT+TGG + chr7_4:7036863-7036882 None:intergenic 20.0%
!!! CTTTTTCACATGATTATAAT+AGG + chr7_4:7037298-7037317 None:intergenic 20.0%
! TTAACTCTAATGAGTAAGAA+GGG + chr7_4:7029492-7029511 None:intergenic 25.0%
! TTTAACTCTAATGAGTAAGA+AGG + chr7_4:7029493-7029512 None:intergenic 25.0%
! GTTATGTTATGTTTAATGGT+TGG + chr7_4:7029548-7029567 None:intergenic 25.0%
!!! TTTGATTTTGCTCCTAATTA+AGG - chr7_4:7030228-7030247 Msa1137970:intron 25.0%
! TTCTTCACTAAACCTTAATT+AGG + chr7_4:7030243-7030262 None:intergenic 25.0%
! AACATCTATTGTAGAAAAGA+TGG - chr7_4:7030537-7030556 Msa1137970:intron 25.0%
!! GTATCTCTTATAGTTTTTCT+AGG + chr7_4:7030673-7030692 None:intergenic 25.0%
! ATTTATCACAAATTCAACCA+GGG + chr7_4:7030823-7030842 None:intergenic 25.0%
! TATTTATCACAAATTCAACC+AGG + chr7_4:7031125-7031144 None:intergenic 25.0%
!! TCGTGTTATTAAATTGTTAC+CGG + chr7_4:7031350-7031369 None:intergenic 25.0%
! CAACAATGATATTTAATCTC+AGG + chr7_4:7031628-7031647 None:intergenic 25.0%
! GTTACTATATAAATCAAGCA+AGG - chr7_4:7031864-7031883 Msa1137970:intron 25.0%
!! TTTTAGTGCAAAAAATGAGA+AGG - chr7_4:7031934-7031953 Msa1137970:intron 25.0%
!!! ATCAATTTTCTCTATTTCTC+TGG + chr7_4:7032278-7032297 None:intergenic 25.0%
!! TTATTGATGATTTCTACAGA+AGG + chr7_4:7032412-7032431 None:intergenic 25.0%
!! TTGTAAATTTAGCATTTTGG+CGG + chr7_4:7032473-7032492 None:intergenic 25.0%
!! AAAGAGGCATACAATAATTT+AGG - chr7_4:7032501-7032520 Msa1137970:CDS 25.0%
!! ACAAACATACTATTTTACTC+TGG + chr7_4:7032538-7032557 None:intergenic 25.0%
! TTTATGGAAATGGAAAACTT+GGG - chr7_4:7032726-7032745 Msa1137970:intron 25.0%
!! AGTGTTTATTAGAAGTTTTG+TGG + chr7_4:7033150-7033169 None:intergenic 25.0%
! TTCACTTTACAATGTAAATG+TGG - chr7_4:7033341-7033360 Msa1137970:intron 25.0%
!! TCACCTCATTTAATTTAAGT+TGG + chr7_4:7033500-7033519 None:intergenic 25.0%
! ATAAAAAAGCAAATGTCTCA+CGG + chr7_4:7033602-7033621 None:intergenic 25.0%
! ACATGTTTACATGATTGATT+TGG - chr7_4:7033724-7033743 Msa1137970:intron 25.0%
!!! TTTTTTGATATAGTTCATGG+GGG - chr7_4:7033897-7033916 Msa1137970:intron 25.0%
!!! GGGTTTTAATTCAATTTTAC+TGG + chr7_4:7033945-7033964 None:intergenic 25.0%
! GTAAAATTGAATTAAAACCC+AGG - chr7_4:7033945-7033964 Msa1137970:intron 25.0%
! TATTAAAAGCAAAGATTCCT+CGG + chr7_4:7034113-7034132 None:intergenic 25.0%
! GAATACATGTAAATATAAGC+TGG + chr7_4:7034312-7034331 None:intergenic 25.0%
!!! CTTTTTTTTCAGAGAATCTT+CGG + chr7_4:7034446-7034465 None:intergenic 25.0%
!! AAGATTCTCTGAAAAAAAAG+TGG - chr7_4:7034446-7034465 Msa1137970:intron 25.0%
! AAAAAGATTGAAGAGTTTGA+TGG - chr7_4:7034469-7034488 Msa1137970:intron 25.0%
! TGAAAGAAGGAAAATACAAT+GGG - chr7_4:7035303-7035322 Msa1137970:intron 25.0%
! TATTGTTACTCACTAAACTA+CGG + chr7_4:7035671-7035690 None:intergenic 25.0%
!!! TTGATTTGCTAAAAAAAGGT+TGG + chr7_4:7035789-7035808 None:intergenic 25.0%
!!! TTTATCATATATTCTGGTTC+AGG - chr7_4:7035919-7035938 Msa1137970:intron 25.0%
!!! ACAGATTCAATAGTTTTGTT+AGG + chr7_4:7036255-7036274 None:intergenic 25.0%
!!! GTTTCAAAGGTATTTACTAT+TGG - chr7_4:7036392-7036411 Msa1137970:intron 25.0%
!!! TTCAAAGGTATTTACTATTG+GGG - chr7_4:7036394-7036413 Msa1137970:intron 25.0%
! TTAATCTTGTCCATATTAGA+CGG - chr7_4:7036586-7036605 Msa1137970:intron 25.0%
! AAATTATTAACCATGACTGT+AGG + chr7_4:7036706-7036725 None:intergenic 25.0%
! AAGCTTCAAACAAATTATCA+AGG + chr7_4:7036800-7036819 None:intergenic 25.0%
!!! AATTTTCAGCACTGTTTTAA+GGG + chr7_4:7037026-7037045 None:intergenic 25.0%
!! AAATTTTCAGCACTGTTTTA+AGG + chr7_4:7037027-7037046 None:intergenic 25.0%
! ATAGTTATCAAAGAAGAGAT+TGG + chr7_4:7037159-7037178 None:intergenic 25.0%
!! GAGAAAATTTAAGTCACTTT+AGG + chr7_4:7037373-7037392 None:intergenic 25.0%
! AATCTAAAAAAATCAACAGG+AGG + chr7_4:7037574-7037593 None:intergenic 25.0%
TAACTCTAATGAGTAAGAAG+GGG + chr7_4:7029491-7029510 None:intergenic 30.0%
ATAACTAACTAACTCGATCT+CGG - chr7_4:7029563-7029582 Msa1137970:CDS 30.0%
AGTTAAAAAAACTCGGTATC+CGG + chr7_4:7029650-7029669 None:intergenic 30.0%
CATTACTGTATTGTAATCAC+TGG - chr7_4:7030264-7030283 Msa1137970:intron 30.0%
TATGAAGTTATTGAAGGGAA+GGG - chr7_4:7030341-7030360 Msa1137970:intron 30.0%
! AAGGGAAGGGAAAATTTTAT+CGG - chr7_4:7030354-7030373 Msa1137970:intron 30.0%
ATGACAACATTAGAGAGAAT+TGG - chr7_4:7030511-7030530 Msa1137970:CDS 30.0%
TGACAACATTAGAGAGAATT+GGG - chr7_4:7030512-7030531 Msa1137970:CDS 30.0%
GCATATAGATAGAAGAACTA+TGG - chr7_4:7030585-7030604 Msa1137970:intron 30.0%
! GAACTATGGATTTTGTAGTT+AGG - chr7_4:7030599-7030618 Msa1137970:intron 30.0%
! AGATTAATGAGTTGGAGAAA+TGG - chr7_4:7030710-7030729 Msa1137970:intron 30.0%
TCTATAAACTTCACTCTCTT+TGG - chr7_4:7030895-7030914 Msa1137970:intron 30.0%
ACAGTGTATCATGAAACAAT+GGG + chr7_4:7030976-7030995 None:intergenic 30.0%
AACAGTGTATCATGAAACAA+TGG + chr7_4:7030977-7030996 None:intergenic 30.0%
!! CACAAAGTGTTGTTAAATAG+CGG - chr7_4:7031000-7031019 Msa1137970:CDS 30.0%
TTGCAGAATGCAAAATATAG+TGG + chr7_4:7031062-7031081 None:intergenic 30.0%
ATTGGACGATTCTTAATCTA+AGG + chr7_4:7031096-7031115 None:intergenic 30.0%
!! AATTTTCCTGGTTCTTCATT+GGG - chr7_4:7031284-7031303 Msa1137970:intron 30.0%
ACTATGTAGCATCATAACTT+CGG + chr7_4:7031439-7031458 None:intergenic 30.0%
TTTCTATCTCACAACAAAGT+CGG + chr7_4:7031474-7031493 None:intergenic 30.0%
TGAATGGTTGAGATAATTAG+TGG - chr7_4:7031739-7031758 Msa1137970:intron 30.0%
GAATGGTTGAGATAATTAGT+GGG - chr7_4:7031740-7031759 Msa1137970:intron 30.0%
TATAGTAACAGAGACGTTTA+TGG + chr7_4:7031853-7031872 None:intergenic 30.0%
AGCTGTTTATTCTACTGTTA+AGG - chr7_4:7031958-7031977 Msa1137970:intron 30.0%
GCTGTTTATTCTACTGTTAA+GGG - chr7_4:7031959-7031978 Msa1137970:intron 30.0%
GAGGGAAAAGAATATTAGAA+AGG - chr7_4:7032021-7032040 Msa1137970:CDS 30.0%
AGTAATTGCCTGAAGTAATA+GGG + chr7_4:7032224-7032243 None:intergenic 30.0%
!! CATTTTGGCGGATATTTTTT+GGG + chr7_4:7032461-7032480 None:intergenic 30.0%
! ACATACTATTTTACTCTGGT+TGG + chr7_4:7032534-7032553 None:intergenic 30.0%
! AGTTTTCCATTTCCATAAAG+TGG + chr7_4:7032725-7032744 None:intergenic 30.0%
CTTTATGGAAATGGAAAACT+TGG - chr7_4:7032725-7032744 Msa1137970:intron 30.0%
TTATGGAAATGGAAAACTTG+GGG - chr7_4:7032727-7032746 Msa1137970:intron 30.0%
CAACAAAACTATTCAGTCTA+AGG + chr7_4:7032812-7032831 None:intergenic 30.0%
!!! CTTAGACTGAATAGTTTTGT+TGG - chr7_4:7032810-7032829 Msa1137970:intron 30.0%
!! GTTTATTAGAAGTTTTGTGG+TGG + chr7_4:7033147-7033166 None:intergenic 30.0%
TTGCTTAAATATAGAACTGG+AGG + chr7_4:7033174-7033193 None:intergenic 30.0%
TAATAACTGAACACAGACAA+GGG + chr7_4:7033285-7033304 None:intergenic 30.0%
AGGCCAACTTAAATTAAATG+AGG - chr7_4:7033494-7033513 Msa1137970:intron 30.0%
AAGTGTTTCATAATTTCCCT+GGG + chr7_4:7033965-7033984 None:intergenic 30.0%
! TTTATCTTTTTCTATCTCCG+AGG - chr7_4:7034093-7034112 Msa1137970:CDS 30.0%
TCCAATACTCTTCAAGAATT+AGG - chr7_4:7034168-7034187 Msa1137970:intron 30.0%
! TCCTAATTCTTGAAGAGTAT+TGG + chr7_4:7034172-7034191 None:intergenic 30.0%
! GATTTTCTACTGTTATGAGT+TGG - chr7_4:7034190-7034209 Msa1137970:intron 30.0%
! GTTATGAGTTGGAAGAAAAA+AGG - chr7_4:7034201-7034220 Msa1137970:intron 30.0%
ATAATTGGATAGAACAGAAC+AGG + chr7_4:7034242-7034261 None:intergenic 30.0%
ATGTATTCAGCTAGATGTTT+GGG - chr7_4:7034324-7034343 Msa1137970:CDS 30.0%
ACAGACAAATACATTATCCT+AGG + chr7_4:7034644-7034663 None:intergenic 30.0%
!!! AAGAAGTGTCTGCTTTTTAT+CGG - chr7_4:7034990-7035009 Msa1137970:CDS 30.0%
! ATTAGAGCATTATAAACCTG+TGG + chr7_4:7035052-7035071 None:intergenic 30.0%
ATTCAGATGAAACTGAAAGA+AGG - chr7_4:7035290-7035309 Msa1137970:intron 30.0%
CTGAAAGAAGGAAAATACAA+TGG - chr7_4:7035302-7035321 Msa1137970:intron 30.0%
GAAAGAAGGAAAATACAATG+GGG - chr7_4:7035304-7035323 Msa1137970:intron 30.0%
AAAGAAGGAAAATACAATGG+GGG - chr7_4:7035305-7035324 Msa1137970:intron 30.0%
GTATCTTGAGCTTTCATATT+TGG + chr7_4:7035347-7035366 None:intergenic 30.0%
! GGAAATTACTGAGGATTTTT+CGG - chr7_4:7035529-7035548 Msa1137970:intron 30.0%
CTCGTTCTCAAAAATGTATT+GGG + chr7_4:7035818-7035837 None:intergenic 30.0%
TAGAGGACAAATATTCAGTA+AGG + chr7_4:7036332-7036351 None:intergenic 30.0%
ACTTACAAACGTAGTTTCAA+AGG - chr7_4:7036379-7036398 Msa1137970:intron 30.0%
!! TCAAAGGTATTTACTATTGG+GGG - chr7_4:7036395-7036414 Msa1137970:intron 30.0%
! AAATGATTTTCTTAATGCGC+AGG - chr7_4:7036456-7036475 Msa1137970:intron 30.0%
TAATCTTGTCCATATTAGAC+GGG - chr7_4:7036587-7036606 Msa1137970:intron 30.0%
! AAAACAGTGCTGAAAATTTC+AGG - chr7_4:7037028-7037047 Msa1137970:CDS 30.0%
CAATTTGATATGCAATCTCT+TGG - chr7_4:7037127-7037146 Msa1137970:CDS 30.0%
TGCAATGTAAGACTAGAAAT+GGG + chr7_4:7037189-7037208 None:intergenic 30.0%
TTGCAATGTAAGACTAGAAA+TGG + chr7_4:7037190-7037209 None:intergenic 30.0%
TTCAATGTCAATAGCAAAGT+GGG + chr7_4:7037420-7037439 None:intergenic 30.0%
AAAGTAAATGCTTGAAGTAC+TGG + chr7_4:7037481-7037500 None:intergenic 30.0%
AGTACTTCAAGCATTTACTT+TGG - chr7_4:7037480-7037499 Msa1137970:five_prime_UTR 30.0%
GTACTTCAAGCATTTACTTT+GGG - chr7_4:7037481-7037500 Msa1137970:five_prime_UTR 30.0%
GGGAATCTAAAAAAATCAAC+AGG + chr7_4:7037577-7037596 None:intergenic 30.0%
TTTGTCTTGTGTTGAGTAGA+GGG + chr7_4:7029408-7029427 None:intergenic 35.0%
ATCTTTCTGATGTGATGATC+CGG + chr7_4:7029451-7029470 None:intergenic 35.0%
TAAGAAGGGGTTATTCTCTT+TGG + chr7_4:7029478-7029497 None:intergenic 35.0%
TTAATGGTTGGATCTGATAG+TGG + chr7_4:7029536-7029555 None:intergenic 35.0%
ACTAATCAGACTCTTGTATC+CGG + chr7_4:7029613-7029632 None:intergenic 35.0%
TCTGATTAGTGACTCGTTAT+TGG - chr7_4:7029623-7029642 Msa1137970:intron 35.0%
GAATGGCTTCACAAAGAAAT+GGG - chr7_4:7029764-7029783 Msa1137970:CDS 35.0%
GAATGTGAGGAGGAATATTA+CGG - chr7_4:7029934-7029953 Msa1137970:intron 35.0%
CTATGAAGTTATTGAAGGGA+AGG - chr7_4:7030340-7030359 Msa1137970:intron 35.0%
GACAACATTAGAGAGAATTG+GGG - chr7_4:7030513-7030532 Msa1137970:CDS 35.0%
AGATGGTAGAAACTAGACTT+AGG - chr7_4:7030554-7030573 Msa1137970:intron 35.0%
AGTTAGGAGAGTAGATTAGA+TGG - chr7_4:7030615-7030634 Msa1137970:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG - chr7_4:7030702-7030721 Msa1137970:intron 35.0%
TATGTATCCGATTCACTTAG+TGG - chr7_4:7030764-7030783 Msa1137970:intron 35.0%
ATGTATCCGATTCACTTAGT+GGG - chr7_4:7030765-7030784 Msa1137970:intron 35.0%
TCTTATCCCACTAAGTGAAT+CGG + chr7_4:7030774-7030793 None:intergenic 35.0%
!! GAATTTTCCTGGTTCTTCAT+TGG - chr7_4:7031283-7031302 Msa1137970:intron 35.0%
GCAAAAAGATGAATAAGCCA+TGG - chr7_4:7031306-7031325 Msa1137970:intron 35.0%
CTGAATGTTATTACATGTGC+CGG - chr7_4:7031376-7031395 Msa1137970:intron 35.0%
TGGTAGTCGAAACTAAAAAC+TGG - chr7_4:7031516-7031535 Msa1137970:intron 35.0%
ATCACCTTGATTATTGTCGT+AGG - chr7_4:7031565-7031584 Msa1137970:intron 35.0%
TATGCCTACGACAATAATCA+AGG + chr7_4:7031572-7031591 None:intergenic 35.0%
TTATTGTCGTAGGCATATTG+TGG - chr7_4:7031575-7031594 Msa1137970:intron 35.0%
! TAATGAACGTGTCATTGTTC+TGG - chr7_4:7031713-7031732 Msa1137970:intron 35.0%
! TCTAATATTCTTTTCCCTCG+TGG + chr7_4:7032020-7032039 None:intergenic 35.0%
TGAATCTCTTGTAGCTTACA+TGG - chr7_4:7032048-7032067 Msa1137970:CDS 35.0%
ATAACTGTTCTAACCTCATC+CGG + chr7_4:7032178-7032197 None:intergenic 35.0%
GTAATTGCCTGAAGTAATAG+GGG + chr7_4:7032223-7032242 None:intergenic 35.0%
CAGTAATTGCCTGAAGTAAT+AGG + chr7_4:7032225-7032244 None:intergenic 35.0%
!! GCATTTTGGCGGATATTTTT+TGG + chr7_4:7032462-7032481 None:intergenic 35.0%
CAGTATCCACTTTATGGAAA+TGG - chr7_4:7032716-7032735 Msa1137970:intron 35.0%
GAATAAAGACCTGTCTTTCA+AGG + chr7_4:7032787-7032806 None:intergenic 35.0%
TGTGAACAGAGATACAACAT+TGG + chr7_4:7032855-7032874 None:intergenic 35.0%
AAACTTATGAAACGTCTGCA+TGG - chr7_4:7032951-7032970 Msa1137970:intron 35.0%
! GATGTTACTTCTCGTTCAAT+TGG - chr7_4:7032981-7033000 Msa1137970:intron 35.0%
CTAATAACTGAACACAGACA+AGG + chr7_4:7033286-7033305 None:intergenic 35.0%
TGTGAATTAACGATGTTCAG+TGG - chr7_4:7033314-7033333 Msa1137970:intron 35.0%
!! AGACCTTTATGCTCTGAAAT+GGG - chr7_4:7033381-7033400 Msa1137970:intron 35.0%
CAAGAAGAAGATAAGATGGA+CGG + chr7_4:7033416-7033435 None:intergenic 35.0%
CTTCCAAGAAGAAGATAAGA+TGG + chr7_4:7033420-7033439 None:intergenic 35.0%
CTTATCTTCTTCTTGGAAGA+TGG - chr7_4:7033421-7033440 Msa1137970:intron 35.0%
TCAACTATTAGTTACTCCCT+CGG + chr7_4:7033640-7033659 None:intergenic 35.0%
GACAATGTCTGAATAAACAC+TGG + chr7_4:7033667-7033686 None:intergenic 35.0%
CAAGTGTTTCATAATTTCCC+TGG + chr7_4:7033966-7033985 None:intergenic 35.0%
CATGTATTCAGCTAGATGTT+TGG - chr7_4:7034323-7034342 Msa1137970:CDS 35.0%
!! AAGAGAAGTTGCTGGTTTAA+AGG - chr7_4:7034354-7034373 Msa1137970:CDS 35.0%
! TTTAAGAAGTGCGGTGTATA+TGG + chr7_4:7034515-7034534 None:intergenic 35.0%
!! CGTATTTGCTTTAAGAAGTG+CGG + chr7_4:7034524-7034543 None:intergenic 35.0%
CGCACTTCTTAAAGCAAATA+CGG - chr7_4:7034522-7034541 Msa1137970:intron 35.0%
! TACTTATTGCCAAGCCTTTT+GGG - chr7_4:7034595-7034614 Msa1137970:intron 35.0%
ATTATCCTAGGATCCAAACA+GGG + chr7_4:7034632-7034651 None:intergenic 35.0%
GGATAATGTATTTGTCTGTG+TGG - chr7_4:7034645-7034664 Msa1137970:intron 35.0%
TTTGCATATACTGTTCCTAC+CGG - chr7_4:7034734-7034753 Msa1137970:CDS 35.0%
AAATGAATACCATTAAGGCC+CGG + chr7_4:7034756-7034775 None:intergenic 35.0%
GAGGGAAATGAATACCATTA+AGG + chr7_4:7034761-7034780 None:intergenic 35.0%
AGGGAAAAATAATGCGTTGT+TGG + chr7_4:7034801-7034820 None:intergenic 35.0%
TGAGACTTCAAATAGTGCAA+AGG - chr7_4:7034955-7034974 Msa1137970:CDS 35.0%
TTATAAACCTGTGGTGAAGA+AGG + chr7_4:7035043-7035062 None:intergenic 35.0%
!! GACACAATGTTCTGAGTTTT+TGG - chr7_4:7035105-7035124 Msa1137970:CDS 35.0%
!! ATGTTCTGAGTTTTTGGATC+AGG - chr7_4:7035111-7035130 Msa1137970:CDS 35.0%
!! TGTTCTGAGTTTTTGGATCA+GGG - chr7_4:7035112-7035131 Msa1137970:CDS 35.0%
!! TCTTTATGGAGGTGTACTTT+TGG + chr7_4:7035140-7035159 None:intergenic 35.0%
ACCTCCATAAAGATGCTTTA+TGG - chr7_4:7035147-7035166 Msa1137970:CDS 35.0%
! TCCATAAAGCATCTTTATGG+AGG + chr7_4:7035151-7035170 None:intergenic 35.0%
TCCATAAAGATGCTTTATGG+AGG - chr7_4:7035150-7035169 Msa1137970:CDS 35.0%
! ACCTCCATAAAGCATCTTTA+TGG + chr7_4:7035154-7035173 None:intergenic 35.0%
AAGAAGGAAAATACAATGGG+GGG - chr7_4:7035306-7035325 Msa1137970:intron 35.0%
TGAAAGCTCAAGATACAATG+AGG - chr7_4:7035351-7035370 Msa1137970:intron 35.0%
CATGAATTGAATGCAGTGTA+AGG - chr7_4:7035376-7035395 Msa1137970:intron 35.0%
! CAGTGTAATTTTTGCGTATC+AGG - chr7_4:7035399-7035418 Msa1137970:intron 35.0%
TTAAGAAGAATGCGAAGTTG+TGG - chr7_4:7035435-7035454 Msa1137970:intron 35.0%
CCTAGACTTCTTATAGGATA+GGG + chr7_4:7035467-7035486 None:intergenic 35.0%
TCCTAGACTTCTTATAGGAT+AGG + chr7_4:7035468-7035487 None:intergenic 35.0%
TCTGATTATTCTGCAAGAGT+CGG - chr7_4:7035562-7035581 Msa1137970:intron 35.0%
CCTCGTTCTCAAAAATGTAT+TGG + chr7_4:7035819-7035838 None:intergenic 35.0%
!! CCAATACATTTTTGAGAACG+AGG - chr7_4:7035816-7035835 Msa1137970:intron 35.0%
! TGAGAACGAGGAACTTTTAA+TGG - chr7_4:7035828-7035847 Msa1137970:intron 35.0%
TGCAAATGCAGAAATAAGTG+CGG - chr7_4:7035991-7036010 Msa1137970:intron 35.0%
ATTATTGTTCATGCGCTGAA+AGG - chr7_4:7036115-7036134 Msa1137970:intron 35.0%
ATATCAGACATCTGTGATAG+GGG + chr7_4:7036163-7036182 None:intergenic 35.0%
CATATCAGACATCTGTGATA+GGG + chr7_4:7036164-7036183 None:intergenic 35.0%
!!! GATGGAAGTTCTTGTTGTTT+TGG - chr7_4:7036197-7036216 Msa1137970:intron 35.0%
AAAGTAGGCATGATTCAACA+AGG + chr7_4:7036634-7036653 None:intergenic 35.0%
ATAGTCCTGTTGAACAAAGT+AGG + chr7_4:7036649-7036668 None:intergenic 35.0%
TTGTTCAACAGGACTATGAA+AGG - chr7_4:7036652-7036671 Msa1137970:intron 35.0%
TATTAACCATGACTGTAGGT+AGG + chr7_4:7036702-7036721 None:intergenic 35.0%
AGGTTTGAATCTGAATGAGA+TGG + chr7_4:7036780-7036799 None:intergenic 35.0%
TGGAAGCTTGCAAATATGTT+TGG - chr7_4:7036959-7036978 Msa1137970:CDS 35.0%
GGAAGCTTGCAAATATGTTT+GGG - chr7_4:7036960-7036979 Msa1137970:CDS 35.0%
GAAGCTTGCAAATATGTTTG+GGG - chr7_4:7036961-7036980 Msa1137970:CDS 35.0%
TTGCAAATATGTTTGGGGAT+TGG - chr7_4:7036966-7036985 Msa1137970:CDS 35.0%
GCTTCTAACATGTTATGATC+AGG - chr7_4:7037317-7037336 Msa1137970:five_prime_UTR 35.0%
GGGAATTGTTTAGACAATCT+GGG + chr7_4:7037400-7037419 None:intergenic 35.0%
TGGGAATTGTTTAGACAATC+TGG + chr7_4:7037401-7037420 None:intergenic 35.0%
CTTCAATGTCAATAGCAAAG+TGG + chr7_4:7037421-7037440 None:intergenic 35.0%
! TTCAAGCATTTACTTTGGGA+TGG - chr7_4:7037485-7037504 Msa1137970:five_prime_UTR 35.0%
! TCTTGTTCTTGAGGTTTTCT+TGG + chr7_4:7037540-7037559 None:intergenic 35.0%
AGGTTTCTTTCTTGTTCTTG+AGG + chr7_4:7037549-7037568 None:intergenic 35.0%
AAAAAAATCAACAGGAGGAG+AGG + chr7_4:7037569-7037588 None:intergenic 35.0%
! ACACTTCTGAAGAGAAAGAA+GGG + chr7_4:7037599-7037618 None:intergenic 35.0%
GTTGAGTAGAGGGAAATTGT+TGG + chr7_4:7029398-7029417 None:intergenic 40.0%
CTTTGTCTTGTGTTGAGTAG+AGG + chr7_4:7029409-7029428 None:intergenic 40.0%
ACAACACCAACAACAAACAC+CGG - chr7_4:7029429-7029448 Msa1137970:CDS 40.0%
TTAGTGACTCGTTATTGGAC+CGG - chr7_4:7029628-7029647 Msa1137970:intron 40.0%
ACGAGTTTAACTCAGTGACT+CGG + chr7_4:7029685-7029704 None:intergenic 40.0%
CGAATGGCTTCACAAAGAAA+TGG - chr7_4:7029763-7029782 Msa1137970:CDS 40.0%
GTTACGAGGAAATTCCATAC+CGG + chr7_4:7029887-7029906 None:intergenic 40.0%
AGGAGGAATATTACGGTTCA+CGG - chr7_4:7029941-7029960 Msa1137970:intron 40.0%
AATATTACGGTTCACGGTGA+AGG - chr7_4:7029947-7029966 Msa1137970:intron 40.0%
ATATTACGGTTCACGGTGAA+GGG - chr7_4:7029948-7029967 Msa1137970:intron 40.0%
! GGGAAAATTTTATCGGACAG+TGG - chr7_4:7030361-7030380 Msa1137970:CDS 40.0%
AGTTAAGCGTAACAGAGATG+AGG - chr7_4:7030442-7030461 Msa1137970:CDS 40.0%
TGGTAGAAACTAGACTTAGG+TGG - chr7_4:7030557-7030576 Msa1137970:intron 40.0%
AAACTAGACTTAGGTGGTCT+GGG - chr7_4:7030563-7030582 Msa1137970:intron 40.0%
TAGGAGAGTAGATTAGATGG+AGG - chr7_4:7030618-7030637 Msa1137970:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG - chr7_4:7030619-7030638 Msa1137970:intron 40.0%
TCACTTAGTGGGATAAGACT+TGG - chr7_4:7030776-7030795 Msa1137970:intron 40.0%
TTCAACCAGTGATTGCACTA+CGG + chr7_4:7030811-7030830 None:intergenic 40.0%
ATCACAAATTCAACCAGGGA+TGG + chr7_4:7031120-7031139 None:intergenic 40.0%
CTCTCCATAGATGAGTCAAA+TGG - chr7_4:7031226-7031245 Msa1137970:intron 40.0%
GGAACCATTTGACTCATCTA+TGG + chr7_4:7031233-7031252 None:intergenic 40.0%
! CAAGTGCTACTAACAACACA+AGG + chr7_4:7031254-7031273 None:intergenic 40.0%
! CTTGTGTTGTTAGTAGCACT+TGG - chr7_4:7031252-7031271 Msa1137970:intron 40.0%
TTAGTAGCACTTGGTTGAAG+TGG - chr7_4:7031261-7031280 Msa1137970:intron 40.0%
! TGGTTGAAGTGGAATTTTCC+TGG - chr7_4:7031272-7031291 Msa1137970:intron 40.0%
! TTTTTGCCCAATGAAGAACC+AGG + chr7_4:7031293-7031312 None:intergenic 40.0%
! CTTCGGATTGAAAGCATGTT+CGG + chr7_4:7031422-7031441 None:intergenic 40.0%
!!! GAAAGAACACTTTTTCCTGC+TGG - chr7_4:7031490-7031509 Msa1137970:intron 40.0%
! GTCATTGTTCTGGCATTGAA+TGG - chr7_4:7031723-7031742 Msa1137970:intron 40.0%
TTCTCGAAGCTTCATCACAT+TGG + chr7_4:7031817-7031836 None:intergenic 40.0%
TCATTGTCATTGAAACCACG+AGG - chr7_4:7032002-7032021 Msa1137970:CDS 40.0%
CATTGTCATTGAAACCACGA+GGG - chr7_4:7032003-7032022 Msa1137970:CDS 40.0%
! AGTTCTTTTCCTGCTTACGA+AGG - chr7_4:7032085-7032104 Msa1137970:CDS 40.0%
!! AAGCTGGGGTTTGATTTTGA+TGG - chr7_4:7032145-7032164 Msa1137970:intron 40.0%
!! AGCTGGGGTTTGATTTTGAT+GGG - chr7_4:7032146-7032165 Msa1137970:intron 40.0%
!! TGATTTTGATGGGCAGATTC+CGG - chr7_4:7032156-7032175 Msa1137970:intron 40.0%
! TATTTTACTCTGGTTGGCAG+GGG + chr7_4:7032528-7032547 None:intergenic 40.0%
! CTATTTTACTCTGGTTGGCA+GGG + chr7_4:7032529-7032548 None:intergenic 40.0%
! ACTATTTTACTCTGGTTGGC+AGG + chr7_4:7032530-7032549 None:intergenic 40.0%
ATGGATGTTTCCTCTTCTGA+TGG - chr7_4:7032680-7032699 Msa1137970:intron 40.0%
TGGATGTTTCCTCTTCTGAT+GGG - chr7_4:7032681-7032700 Msa1137970:intron 40.0%
CCATAAAGTGGATACTGTAG+AGG + chr7_4:7032713-7032732 None:intergenic 40.0%
CCTCTACAGTATCCACTTTA+TGG - chr7_4:7032710-7032729 Msa1137970:intron 40.0%
AAATCAGCTCCTTGAAAGAC+AGG - chr7_4:7032775-7032794 Msa1137970:intron 40.0%
! AGCTCATGTTCAGCAGTTTT+TGG - chr7_4:7032878-7032897 Msa1137970:intron 40.0%
TAAACAATGCTGCAGAAGCA+AGG - chr7_4:7032916-7032935 Msa1137970:intron 40.0%
AAACAATGCTGCAGAAGCAA+GGG - chr7_4:7032917-7032936 Msa1137970:intron 40.0%
!!! ACTTCCAACATTTTGAGACG+TGG + chr7_4:7033009-7033028 None:intergenic 40.0%
TGGAAGTCTTAGACAACTTC+AGG - chr7_4:7033022-7033041 Msa1137970:intron 40.0%
GTAGTAGGAATCACACACAA+AGG + chr7_4:7033125-7033144 None:intergenic 40.0%
!! AGAAGTTTTGTGGTGGTAGT+AGG + chr7_4:7033140-7033159 None:intergenic 40.0%
AACACAGACAAGGGTAATTC+GGG + chr7_4:7033276-7033295 None:intergenic 40.0%
GAACACAGACAAGGGTAATT+CGG + chr7_4:7033277-7033296 None:intergenic 40.0%
!! CAGACCTTTATGCTCTGAAA+TGG - chr7_4:7033380-7033399 Msa1137970:intron 40.0%
CTTCCCATTTCAGAGCATAA+AGG + chr7_4:7033387-7033406 None:intergenic 40.0%
CGTCCATCTTATCTTCTTCT+TGG - chr7_4:7033414-7033433 Msa1137970:intron 40.0%
CAACTATTAGTTACTCCCTC+GGG + chr7_4:7033639-7033658 None:intergenic 40.0%
GACATTGTCTTAAGCTGCTT+TGG - chr7_4:7033678-7033697 Msa1137970:intron 40.0%
GATGTGAAAAGCTGAACCAA+AGG + chr7_4:7033813-7033832 None:intergenic 40.0%
TGAATAAGTTATGTGCCGAG+AGG - chr7_4:7034413-7034432 Msa1137970:intron 40.0%
! GTACTTATTGCCAAGCCTTT+TGG - chr7_4:7034594-7034613 Msa1137970:intron 40.0%
CCATTATTACCCAAAAGGCT+TGG + chr7_4:7034607-7034626 None:intergenic 40.0%
!! CCAAGCCTTTTGGGTAATAA+TGG - chr7_4:7034604-7034623 Msa1137970:intron 40.0%
GGGAACCATTATTACCCAAA+AGG + chr7_4:7034612-7034631 None:intergenic 40.0%
GGTAATAATGGTTCCCTGTT+TGG - chr7_4:7034616-7034635 Msa1137970:intron 40.0%
CATTATCCTAGGATCCAAAC+AGG + chr7_4:7034633-7034652 None:intergenic 40.0%
!! TGTACTGGCTACTTAGACAA+TGG - chr7_4:7034697-7034716 Msa1137970:intron 40.0%
TTGCATATACTGTTCCTACC+GGG - chr7_4:7034735-7034754 Msa1137970:CDS 40.0%
AGCATGTAGAGGCTATTATC+TGG + chr7_4:7035019-7035038 None:intergenic 40.0%
!! GCTTTATGGAGGTGTACTTT+TGG - chr7_4:7035161-7035180 Msa1137970:CDS 40.0%
GATCTTCCATTTCTACCGTT+TGG - chr7_4:7035183-7035202 Msa1137970:CDS 40.0%
TGACTACCAAACGGTAGAAA+TGG + chr7_4:7035192-7035211 None:intergenic 40.0%
CGGAAACTATGACTACCAAA+CGG + chr7_4:7035201-7035220 None:intergenic 40.0%
CCCTATCCTATAAGAAGTCT+AGG - chr7_4:7035464-7035483 Msa1137970:intron 40.0%
CTTGCTCCTAGACTTCTTAT+AGG + chr7_4:7035473-7035492 None:intergenic 40.0%
GACTCTTGCAGAATAATCAG+AGG + chr7_4:7035563-7035582 None:intergenic 40.0%
AAAGTTGCATGTGAGAGAAG+TGG - chr7_4:7035585-7035604 Msa1137970:intron 40.0%
CAAAACAAGGGATACGGTAT+AGG + chr7_4:7035708-7035727 None:intergenic 40.0%
ACAGAGCAAAACAAGGGATA+CGG + chr7_4:7035714-7035733 None:intergenic 40.0%
CATATTGATGGAATTGCCGA+CGG + chr7_4:7036049-7036068 None:intergenic 40.0%
CGGCAATTCCATCAATATGT+CGG - chr7_4:7036050-7036069 Msa1137970:intron 40.0%
GGCAATTCCATCAATATGTC+GGG - chr7_4:7036051-7036070 Msa1137970:intron 40.0%
CCATATCAGACATCTGTGAT+AGG + chr7_4:7036165-7036184 None:intergenic 40.0%
CCTATCACAGATGTCTGATA+TGG - chr7_4:7036162-7036181 Msa1137970:intron 40.0%
ATCACAGATGTCTGATATGG+AGG - chr7_4:7036165-7036184 Msa1137970:intron 40.0%
ACAACAAGAACTTCCATCCT+GGG + chr7_4:7036195-7036214 None:intergenic 40.0%
AACAACAAGAACTTCCATCC+TGG + chr7_4:7036196-7036215 None:intergenic 40.0%
! ATTTTCTTAATGCGCAGGCT+TGG - chr7_4:7036461-7036480 Msa1137970:intron 40.0%
ACGTTTCAAGCAAAACTCCA+GGG + chr7_4:7036523-7036542 None:intergenic 40.0%
! TGGTTCAGAAGCTAGTGTTT+TGG - chr7_4:7036545-7036564 Msa1137970:intron 40.0%
TCATGCCTACTTTGTTCAAC+AGG - chr7_4:7036641-7036660 Msa1137970:intron 40.0%
ATGACTGTAGGTAGGATTTG+GGG + chr7_4:7036694-7036713 None:intergenic 40.0%
CATGACTGTAGGTAGGATTT+GGG + chr7_4:7036695-7036714 None:intergenic 40.0%
AGAACAAGAAAGAGCTGTCA+CGG - chr7_4:7036885-7036904 Msa1137970:CDS 40.0%
AAAGAGCTGTCACGGAAAAA+TGG - chr7_4:7036893-7036912 Msa1137970:CDS 40.0%
AAAACACCAGTCTTGAGTTC+AGG + chr7_4:7036922-7036941 None:intergenic 40.0%
TTTGAATGCTCAGCAGAGTT+TGG - chr7_4:7036939-7036958 Msa1137970:CDS 40.0%
! ACTTCTGAAGAGAAAGAAGG+GGG + chr7_4:7037597-7037616 None:intergenic 40.0%
! CACTTCTGAAGAGAAAGAAG+GGG + chr7_4:7037598-7037617 None:intergenic 40.0%
! CACACTTCTGAAGAGAAAGA+AGG + chr7_4:7037600-7037619 None:intergenic 40.0%
!! GATGATCCGGTGTTTGTTGT+TGG + chr7_4:7029438-7029457 None:intergenic 45.0%
!! TTGGATCTGATAGTGGATGG+TGG + chr7_4:7029529-7029548 None:intergenic 45.0%
!! TGGTTGGATCTGATAGTGGA+TGG + chr7_4:7029532-7029551 None:intergenic 45.0%
AGACTCTTGTATCCGGTATC+CGG + chr7_4:7029606-7029625 None:intergenic 45.0%
GAAATGGGATACAGACCACT+CGG - chr7_4:7029779-7029798 Msa1137970:CDS 45.0%
!! TTTCGGATCGATTCGACTGA+CGG + chr7_4:7029842-7029861 None:intergenic 45.0%
! TGTTCCCACGGCAGATTTTT+CGG + chr7_4:7029859-7029878 None:intergenic 45.0%
ATACCGGAATCATGTTCCCA+CGG + chr7_4:7029871-7029890 None:intergenic 45.0%
AGAAGACGGTTAGGAATGTG+AGG - chr7_4:7029921-7029940 Msa1137970:intron 45.0%
TATTACGGTTCACGGTGAAG+GGG - chr7_4:7029949-7029968 Msa1137970:intron 45.0%
AGGAAGAAGGAGAAGAGAGA+AGG - chr7_4:7029983-7030002 Msa1137970:intron 45.0%
GGAAGAAGGAGAAGAGAGAA+GGG - chr7_4:7029984-7030003 Msa1137970:intron 45.0%
GAAGAAGGAGAAGAGAGAAG+GGG - chr7_4:7029985-7030004 Msa1137970:intron 45.0%
AGAGGTTGAGGAATGTTGTG+AGG - chr7_4:7030059-7030078 Msa1137970:CDS 45.0%
AGAGGAAGGATTTGAAAGCG+AGG - chr7_4:7030086-7030105 Msa1137970:CDS 45.0%
TTTGAAAGCGAGGATGCTAG+AGG - chr7_4:7030096-7030115 Msa1137970:CDS 45.0%
GGAAGAGGATGCTTGATGAA+CGG - chr7_4:7030140-7030159 Msa1137970:CDS 45.0%
GAAGAGGATGCTTGATGAAC+GGG - chr7_4:7030141-7030160 Msa1137970:CDS 45.0%
TTGATGAACGGGCGAATTAC+AGG - chr7_4:7030152-7030171 Msa1137970:CDS 45.0%
! AACGGGCGAATTACAGGTTT+TGG - chr7_4:7030158-7030177 Msa1137970:CDS 45.0%
TTATCGGACAGTGGTAAGAC+TGG - chr7_4:7030370-7030389 Msa1137970:CDS 45.0%
!! TACGCTTAACTTGTTCGTGC+CGG + chr7_4:7030433-7030452 None:intergenic 45.0%
GAAACTAGACTTAGGTGGTC+TGG - chr7_4:7030562-7030581 Msa1137970:intron 45.0%
GGAGAGTAGATTAGATGGAG+GGG - chr7_4:7030620-7030639 Msa1137970:intron 45.0%
GAGCCAAATCACTAGAGGTA+GGG - chr7_4:7030642-7030661 Msa1137970:intron 45.0%
AGCCAAATCACTAGAGGTAG+GGG - chr7_4:7030643-7030662 Msa1137970:intron 45.0%
TTCCCCTACCTCTAGTGATT+TGG + chr7_4:7030648-7030667 None:intergenic 45.0%
CTTAGTGGGATAAGACTTGG+TGG - chr7_4:7030779-7030798 Msa1137970:intron 45.0%
TAAGACCGTAGTGCAATCAC+TGG - chr7_4:7030803-7030822 Msa1137970:intron 45.0%
CAGCTATAGCGATGACATAG+TGG - chr7_4:7030936-7030955 Msa1137970:CDS 45.0%
AATTCAACCAGGGATGGCAT+TGG + chr7_4:7031114-7031133 None:intergenic 45.0%
GTCTATGTGTCAGTGTTCCA+TGG + chr7_4:7031326-7031345 None:intergenic 45.0%
GAACACTGACACATAGACAC+CGG - chr7_4:7031328-7031347 Msa1137970:intron 45.0%
!!! ACACTTTTTCCTGCTGGCTT+TGG - chr7_4:7031496-7031515 Msa1137970:intron 45.0%
ACTTGCTTATGCCTGCAGAA+TGG + chr7_4:7031773-7031792 None:intergenic 45.0%
CAGGCATAAGCAAGTGATGT+TGG - chr7_4:7031778-7031797 Msa1137970:intron 45.0%
GCATAAGCAAGTGATGTTGG+AGG - chr7_4:7031781-7031800 Msa1137970:intron 45.0%
TTCATCACATTGGCGGTCAT+AGG + chr7_4:7031807-7031826 None:intergenic 45.0%
TCGAAGCTTCATCACATTGG+CGG + chr7_4:7031814-7031833 None:intergenic 45.0%
CGTGGATTCTTCCGTTGAAA+TGG - chr7_4:7031904-7031923 Msa1137970:intron 45.0%
TTTCCTGCTTACGAAGGAAG+TGG - chr7_4:7032091-7032110 Msa1137970:CDS 45.0%
GTAATAGGGGAGGACTCTTT+AGG + chr7_4:7032210-7032229 None:intergenic 45.0%
ATTGCCTGAAGTAATAGGGG+AGG + chr7_4:7032220-7032239 None:intergenic 45.0%
!!! TGATTTTGACTTCCTCCTGG+AGG + chr7_4:7032761-7032780 None:intergenic 45.0%
!!! AGCTGATTTTGACTTCCTCC+TGG + chr7_4:7032764-7032783 None:intergenic 45.0%
CTTATGAAACGTCTGCATGG+AGG - chr7_4:7032954-7032973 Msa1137970:intron 45.0%
!! TGCTCTGAAATGGGAAGAAG+TGG - chr7_4:7033390-7033409 Msa1137970:intron 45.0%
CTTGGAAGATGGTAGTACAC+TGG - chr7_4:7033432-7033451 Msa1137970:intron 45.0%
! ATGCTTCTGTTTGAAACCCG+AGG - chr7_4:7033620-7033639 Msa1137970:intron 45.0%
! TGCTTCTGTTTGAAACCCGA+GGG - chr7_4:7033621-7033640 Msa1137970:intron 45.0%
TCAGCTAGATGTTTGGGCAA+AGG - chr7_4:7034330-7034349 Msa1137970:CDS 45.0%
GCAAAGGAAAGAGAAGTTGC+TGG - chr7_4:7034346-7034365 Msa1137970:CDS 45.0%
ATCTTCGGCTTCTTTCCTCT+CGG + chr7_4:7034431-7034450 None:intergenic 45.0%
!! TGCAGGATGCTGCTTCATTT+TGG - chr7_4:7034864-7034883 Msa1137970:CDS 45.0%
TAAAGCATACTCCCTTGCAG+TGG + chr7_4:7034903-7034922 None:intergenic 45.0%
TCAACAACAGCAGAACATGC+TGG + chr7_4:7034938-7034957 None:intergenic 45.0%
! GTGAAGAAGGAAGCATGTAG+AGG + chr7_4:7035030-7035049 None:intergenic 45.0%
AAGGAAAATACAATGGGGGG+TGG - chr7_4:7035309-7035328 Msa1137970:intron 45.0%
!! GCAAGAGACTTTCTGAAGCT+CGG - chr7_4:7035488-7035507 Msa1137970:intron 45.0%
GCTGGCTAAGGAAATTACTG+AGG - chr7_4:7035520-7035539 Msa1137970:intron 45.0%
TTGCATGTGAGAGAAGTGGT+TGG - chr7_4:7035589-7035608 Msa1137970:intron 45.0%
TGCATGTGAGAGAAGTGGTT+GGG - chr7_4:7035590-7035609 Msa1137970:intron 45.0%
CATGGGACAGAGCAAAACAA+GGG + chr7_4:7035720-7035739 None:intergenic 45.0%
TCATGGGACAGAGCAAAACA+AGG + chr7_4:7035721-7035740 None:intergenic 45.0%
!!! GCTATTTTGACAGCAAGAGC+CGG - chr7_4:7036013-7036032 Msa1137970:intron 45.0%
! ATTGGGGGTATGCATATACG+TGG - chr7_4:7036410-7036429 Msa1137970:intron 45.0%
! TTGGGGGTATGCATATACGT+GGG - chr7_4:7036411-7036430 Msa1137970:intron 45.0%
GACGTTTCAAGCAAAACTCC+AGG + chr7_4:7036524-7036543 None:intergenic 45.0%
! GAGTTTTGCTTGAAACGTCG+TGG - chr7_4:7036525-7036544 Msa1137970:intron 45.0%
GCACAAGATCCCGTCTAATA+TGG + chr7_4:7036599-7036618 None:intergenic 45.0%
TGACTGTAGGTAGGATTTGG+GGG + chr7_4:7036693-7036712 None:intergenic 45.0%
CCATGACTGTAGGTAGGATT+TGG + chr7_4:7036696-7036715 None:intergenic 45.0%
CCAAATCCTACCTACAGTCA+TGG - chr7_4:7036693-7036712 Msa1137970:intron 45.0%
TGCTTAGCAGAAGTTGCATC+AGG + chr7_4:7037059-7037078 None:intergenic 45.0%
TTCTTCTGCAGCTTGATGAG+TGG - chr7_4:7037211-7037230 Msa1137970:CDS 45.0%
!!! AATTAAATGAATTTTAATTT+AGG - chr7_4:7033524-7033543 Msa1137970:intron 5.0%
!! TATATTAAAAAATTTATAGT+AGG - chr7_4:7034053-7034072 Msa1137970:CDS 5.0%
!! ATATTAAAAAATTTATAGTA+GGG - chr7_4:7034054-7034073 Msa1137970:CDS 5.0%
!! TCTGATAGTGGATGGTGGAG+TGG + chr7_4:7029524-7029543 None:intergenic 50.0%
ATCTCGGCTTAGTCGCTTCT+TGG - chr7_4:7029579-7029598 Msa1137970:intron 50.0%
! AGCCATTCGAGTATCGCTTC+CGG + chr7_4:7029752-7029771 None:intergenic 50.0%
! CGGTGAATGCGATTTTCCTC+CGG + chr7_4:7029822-7029841 None:intergenic 50.0%
TCGATCCGAAAAATCTGCCG+TGG - chr7_4:7029851-7029870 Msa1137970:intron 50.0%
CGATCCGAAAAATCTGCCGT+GGG - chr7_4:7029852-7029871 Msa1137970:intron 50.0%
GTGGGAACATGATTCCGGTA+TGG - chr7_4:7029870-7029889 Msa1137970:intron 50.0%
CGAAATCGGAGAAGACGGTT+AGG - chr7_4:7029912-7029931 Msa1137970:intron 50.0%
AGACGGTTAGGAATGTGAGG+AGG - chr7_4:7029924-7029943 Msa1137970:intron 50.0%
! TGCGTTGATGGAGAGGGATT+CGG - chr7_4:7030021-7030040 Msa1137970:intron 50.0%
AGAAGGAGGTTGAGAGGTTG+AGG - chr7_4:7030047-7030066 Msa1137970:CDS 50.0%
GGAATGTTGTGAGGAGACAG+AGG - chr7_4:7030068-7030087 Msa1137970:CDS 50.0%
TGTTGTGAGGAGACAGAGGA+AGG - chr7_4:7030072-7030091 Msa1137970:CDS 50.0%
GAGGATGCTAGAGGTTTCGA+GGG - chr7_4:7030105-7030124 Msa1137970:CDS 50.0%
AGAGGTTTCGAGGGAAGAAG+CGG - chr7_4:7030114-7030133 Msa1137970:CDS 50.0%
TGTTGTTCGAGACGGAGTGT+TGG - chr7_4:7030396-7030415 Msa1137970:CDS 50.0%
! GTTGTTCGAGACGGAGTGTT+GGG - chr7_4:7030397-7030416 Msa1137970:CDS 50.0%
! AGTGTTGGGCGGTAAAGAAC+CGG - chr7_4:7030411-7030430 Msa1137970:CDS 50.0%
CAGAGATGAGGATGCTGCAT+TGG - chr7_4:7030454-7030473 Msa1137970:CDS 50.0%
AGGATGCTGCATTGGATGTG+TGG - chr7_4:7030462-7030481 Msa1137970:CDS 50.0%
GGATGCTGCATTGGATGTGT+GGG - chr7_4:7030463-7030482 Msa1137970:CDS 50.0%
GGATGTGTGGGAAGACTAGA+CGG - chr7_4:7030475-7030494 Msa1137970:CDS 50.0%
GGAGCCAAATCACTAGAGGT+AGG - chr7_4:7030641-7030660 Msa1137970:intron 50.0%
TTCCGAGATGTCAGTGTCAC+CGG + chr7_4:7031398-7031417 None:intergenic 50.0%
TTTCGACTACCAAAGCCAGC+AGG + chr7_4:7031508-7031527 None:intergenic 50.0%
TGGGTTCGTTACCATTCTGC+AGG - chr7_4:7031759-7031778 Msa1137970:intron 50.0%
GCAAGGGATGCTCAAAGATC+AGG - chr7_4:7031881-7031900 Msa1137970:intron 50.0%
GAGTCCTCCCCTATTACTTC+AGG - chr7_4:7032213-7032232 Msa1137970:intron 50.0%
GAGCTGATGCAGAGATCTTG+AGG - chr7_4:7032302-7032321 Msa1137970:intron 50.0%
GGAGCCACGTCTCAAAATGT+TGG - chr7_4:7033002-7033021 Msa1137970:intron 50.0%
TGGTTCCCTGTTTGGATCCT+AGG - chr7_4:7034624-7034643 Msa1137970:intron 50.0%
GAATACCATTAAGGCCCGGT+AGG + chr7_4:7034752-7034771 None:intergenic 50.0%
GAGTCACATGCACGACTTGA+GGG + chr7_4:7034779-7034798 None:intergenic 50.0%
TCAGCAACCATCCACTGCAA+GGG - chr7_4:7034889-7034908 Msa1137970:CDS 50.0%
CATGCTTCCTTCTTCACCAC+AGG - chr7_4:7035033-7035052 Msa1137970:CDS 50.0%
AAGTGGTTGGGTGAGAGAGT+TGG - chr7_4:7035602-7035621 Msa1137970:intron 50.0%
AGTGGTTGGGTGAGAGAGTT+GGG - chr7_4:7035603-7035622 Msa1137970:intron 50.0%
TTCCTGTCCAGATGATCCAC+TGG + chr7_4:7035966-7035985 None:intergenic 50.0%
GCTGAGACCCGACATATTGA+TGG + chr7_4:7036061-7036080 None:intergenic 50.0%
TCAGACATCTGTGATAGGGG+TGG + chr7_4:7036160-7036179 None:intergenic 50.0%
TTCTTAATGCGCAGGCTTGG+AGG - chr7_4:7036464-7036483 Msa1137970:intron 50.0%
TCTTAATGCGCAGGCTTGGA+GGG - chr7_4:7036465-7036484 Msa1137970:intron 50.0%
AAACTCCAGGGACTCCAGTA+CGG + chr7_4:7036511-7036530 None:intergenic 50.0%
AGACGGGATCTTGTGCAAAG+TGG - chr7_4:7036603-7036622 Msa1137970:intron 50.0%
TGGTTGCCTGAACTCAAGAC+TGG - chr7_4:7036913-7036932 Msa1137970:CDS 50.0%
TTCTGCAGCTTGATGAGTGG+TGG - chr7_4:7037214-7037233 Msa1137970:CDS 50.0%
TCTGCAGCTTGATGAGTGGT+GGG - chr7_4:7037215-7037234 Msa1137970:CDS 50.0%
GGCTTAGTCGCTTCTTGGAC+CGG - chr7_4:7029584-7029603 Msa1137970:intron 55.0%
TCGCTTCTTGGACCGGATAC+CGG - chr7_4:7029591-7029610 Msa1137970:intron 55.0%
ACAATCTGCATCGCCGTCAC+CGG - chr7_4:7029730-7029749 Msa1137970:CDS 55.0%
! TCGAGTATCGCTTCCGGTGA+CGG + chr7_4:7029746-7029765 None:intergenic 55.0%
CACCGGAAGCGATACTCGAA+TGG - chr7_4:7029747-7029766 Msa1137970:CDS 55.0%
CTGCCGTGGGAACATGATTC+CGG - chr7_4:7029865-7029884 Msa1137970:intron 55.0%
CCTCGTAACGCGTGCGAAAT+CGG - chr7_4:7029898-7029917 Msa1137970:intron 55.0%
GCGTGCGAAATCGGAGAAGA+CGG - chr7_4:7029907-7029926 Msa1137970:intron 55.0%
GAAGGAGAAGAGAGAAGGGG+AGG - chr7_4:7029988-7030007 Msa1137970:intron 55.0%
GAAGAGAGAAGGGGAGGAAG+TGG - chr7_4:7029994-7030013 Msa1137970:intron 55.0%
GGAAGTGGAGGTTGCGTTGA+TGG - chr7_4:7030009-7030028 Msa1137970:intron 55.0%
! TGGAGGTTGCGTTGATGGAG+AGG - chr7_4:7030014-7030033 Msa1137970:intron 55.0%
! GGAGGTTGCGTTGATGGAGA+GGG - chr7_4:7030015-7030034 Msa1137970:intron 55.0%
!! GGAGAGGGATTCGGTGAAGA+AGG - chr7_4:7030030-7030049 Msa1137970:intron 55.0%
!! GAGGGATTCGGTGAAGAAGG+AGG - chr7_4:7030033-7030052 Msa1137970:intron 55.0%
CGGTGAAGAAGGAGGTTGAG+AGG - chr7_4:7030041-7030060 Msa1137970:intron 55.0%
CGAGGATGCTAGAGGTTTCG+AGG - chr7_4:7030104-7030123 Msa1137970:CDS 55.0%
TTTCGAGGGAAGAAGCGGAG+AGG - chr7_4:7030119-7030138 Msa1137970:CDS 55.0%
TCGGACAGTGGTAAGACTGG+CGG - chr7_4:7030373-7030392 Msa1137970:CDS 55.0%
!! ACTGGCGGTGTTGTTCGAGA+CGG - chr7_4:7030388-7030407 Msa1137970:CDS 55.0%
GAGGGGAGCCAAATCACTAG+AGG - chr7_4:7030637-7030656 Msa1137970:intron 55.0%
GAATCGTCCAATGCCATCCC+TGG - chr7_4:7031104-7031123 Msa1137970:intron 55.0%
TGCCGGTGACACTGACATCT+CGG - chr7_4:7031393-7031412 Msa1137970:intron 55.0%
GGATGCTCAAAGATCAGGCG+TGG - chr7_4:7031886-7031905 Msa1137970:intron 55.0%
ACGCCACTTCCTTCGTAAGC+AGG + chr7_4:7032097-7032116 None:intergenic 55.0%
AGCTTCGCTGCTTCTGCTTG+AGG + chr7_4:7032130-7032149 None:intergenic 55.0%
TCAAGCAGAAGCAGCGAAGC+TGG - chr7_4:7032129-7032148 Msa1137970:CDS 55.0%
CAAGCAGAAGCAGCGAAGCT+GGG - chr7_4:7032130-7032149 Msa1137970:CDS 55.0%
AAGCAGAAGCAGCGAAGCTG+GGG - chr7_4:7032131-7032150 Msa1137970:CDS 55.0%
! TGATGGGCAGATTCCGGATG+AGG - chr7_4:7032162-7032181 Msa1137970:intron 55.0%
AGGAGAGCTCCCATCAGAAG+AGG + chr7_4:7032693-7032712 None:intergenic 55.0%
CTGTTCCTACCGGGCCTTAA+TGG - chr7_4:7034744-7034763 Msa1137970:CDS 55.0%
GGAGTCACATGCACGACTTG+AGG + chr7_4:7034780-7034799 None:intergenic 55.0%
GTCAGCAACCATCCACTGCA+AGG - chr7_4:7034888-7034907 Msa1137970:CDS 55.0%
GCATACTCCCTTGCAGTGGA+TGG + chr7_4:7034899-7034918 None:intergenic 55.0%
! GAAGCTCGGTGAGTTTGAGC+TGG - chr7_4:7035502-7035521 Msa1137970:intron 55.0%
CGGTGAGTTTGAGCTGGCTA+AGG - chr7_4:7035508-7035527 Msa1137970:intron 55.0%
GTGAGAGAGTTGGGAGTGAG+AGG - chr7_4:7035612-7035631 Msa1137970:intron 55.0%
! TCTGGTTCAGGCACTGCTTG+AGG - chr7_4:7035931-7035950 Msa1137970:intron 55.0%
AGATGATCCACTGGACCCGA+TGG + chr7_4:7035957-7035976 None:intergenic 55.0%
ATCGGGTCCAGTGGATCATC+TGG - chr7_4:7035956-7035975 Msa1137970:intron 55.0%
GTCCAGTGGATCATCTGGAC+AGG - chr7_4:7035961-7035980 Msa1137970:intron 55.0%
GCTGCACTTCAGTATGCTGC+TGG - chr7_4:7036079-7036098 Msa1137970:intron 55.0%
GCACTTCAGTATGCTGCTGG+TGG - chr7_4:7036082-7036101 Msa1137970:intron 55.0%
!! ATAGGGGTGGACTGTGCACT+AGG + chr7_4:7036147-7036166 None:intergenic 55.0%
! TCTGATATGGAGGCATGCCC+AGG - chr7_4:7036175-7036194 Msa1137970:intron 55.0%
! ATATGGAGGCATGCCCAGGA+TGG - chr7_4:7036179-7036198 Msa1137970:intron 55.0%
! TGCTGGTCTAGCATCCGTAC+TGG - chr7_4:7036494-7036513 Msa1137970:intron 55.0%
! TGATGAGTGGTGGGAGCAAC+CGG - chr7_4:7037224-7037243 Msa1137970:CDS 55.0%
TCGACTGGGTGACAGTGGAT+GGG - chr7_4:7037259-7037278 Msa1137970:CDS 55.0%
! ATGCGATTTTCCTCCGGCGC+CGG + chr7_4:7029816-7029835 None:intergenic 60.0%
CCGATTTCGCACGCGTTACG+AGG + chr7_4:7029901-7029920 None:intergenic 60.0%
ACGGTTCACGGTGAAGGGGA+TGG - chr7_4:7029953-7029972 Msa1137970:intron 60.0%
GTTCACGGTGAAGGGGATGG+TGG - chr7_4:7029956-7029975 Msa1137970:intron 60.0%
! ACGGTGAAGGGGATGGTGGT+GGG - chr7_4:7029960-7029979 Msa1137970:intron 60.0%
!! GGATGGTGGTGGGAGGAAGA+AGG - chr7_4:7029970-7029989 Msa1137970:intron 60.0%
GAGAGAAGGGGAGGAAGTGG+AGG - chr7_4:7029997-7030016 Msa1137970:intron 60.0%
GGGAAGAAGCGGAGAGGAAG+AGG - chr7_4:7030125-7030144 Msa1137970:CDS 60.0%
!! GTTCGAGACGGAGTGTTGGG+CGG - chr7_4:7030400-7030419 Msa1137970:CDS 60.0%
! CAGGCACTGCTTGAGGCCAT+CGG - chr7_4:7035938-7035957 Msa1137970:intron 60.0%
! AGGCACTGCTTGAGGCCATC+GGG - chr7_4:7035939-7035958 Msa1137970:intron 60.0%
TGACAGCAAGAGCCGGTGCT+CGG - chr7_4:7036020-7036039 Msa1137970:intron 60.0%
GGCTTGGAGGGTTCAGATGC+TGG - chr7_4:7036477-7036496 Msa1137970:intron 60.0%
AGCATCCGTACTGGAGTCCC+TGG - chr7_4:7036503-7036522 Msa1137970:intron 60.0%
CAGTCGACAACCGTCGATGC+CGG + chr7_4:7037246-7037265 None:intergenic 60.0%
!! GGCATCGACGGTTGTCGACT+GGG - chr7_4:7037245-7037264 Msa1137970:CDS 60.0%
! GGTTGTCGACTGGGTGACAG+TGG - chr7_4:7037254-7037273 Msa1137970:CDS 60.0%
GTCGACTGGGTGACAGTGGA+TGG - chr7_4:7037258-7037277 Msa1137970:CDS 60.0%
GGCTGCTTCACAGCAACTCG+AGG + chr7_4:7037460-7037479 None:intergenic 60.0%
! CACGGTGAAGGGGATGGTGG+TGG - chr7_4:7029959-7029978 Msa1137970:intron 65.0%
!! GTGAAGGGGATGGTGGTGGG+AGG - chr7_4:7029963-7029982 Msa1137970:intron 65.0%
CTTGGGGCTGATGTGCCTCC+AGG - chr7_4:7032743-7032762 Msa1137970:intron 65.0%
CTTGAGGCCATCGGGTCCAG+TGG - chr7_4:7035947-7035966 Msa1137970:intron 65.0%
GACAGCAAGAGCCGGTGCTC+GGG - chr7_4:7036021-7036040 Msa1137970:intron 65.0%
! GTGGGAGCAACCGGCATCGA+CGG - chr7_4:7037233-7037252 Msa1137970:CDS 65.0%
!! CGGCATCGACGGTTGTCGAC+TGG - chr7_4:7037244-7037263 Msa1137970:CDS 65.0%
CCACTCGGCCAATACGCCGC+CGG - chr7_4:7029794-7029813 Msa1137970:intron 70.0%
!! CGATTTTCCTCCGGCGCCGG+CGG + chr7_4:7029813-7029832 None:intergenic 70.0%
GGGGCTGATGTGCCTCCAGG+AGG - chr7_4:7032746-7032765 Msa1137970:intron 70.0%
AGCCGGTGCTCGGGATCCGT+CGG - chr7_4:7036030-7036049 Msa1137970:intron 70.0%
TGCCGACGGATCCCGAGCAC+CGG + chr7_4:7036035-7036054 None:intergenic 70.0%
! CCGGCGGCGTATTGGCCGAG+TGG + chr7_4:7029797-7029816 None:intergenic 75.0%
! GGCCAATACGCCGCCGGCGC+CGG - chr7_4:7029800-7029819 Msa1137970:intron 80.0%
!!! CTCCGGCGCCGGCGGCGTAT+TGG + chr7_4:7029805-7029824 None:intergenic 80.0%
!! CAATACGCCGCCGGCGCCGG+AGG - chr7_4:7029803-7029822 Msa1137970:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 7029393 7037639 7029393 ID=Msa1137970;Name=Msa1137970
chr7_4 mRNA 7029393 7037639 7029393 ID=Msa1137970-mRNA-1;Parent=Msa1137970;Name=Msa1137970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=332|0.9|0.81|1|1|1|11|0|838
chr7_4 exon 7029393 7029591 7029393 ID=Msa1137970-mRNA-1:exon:1985;Parent=Msa1137970-mRNA-1
chr7_4 exon 7029683 7029810 7029683 ID=Msa1137970-mRNA-1:exon:1984;Parent=Msa1137970-mRNA-1
chr7_4 exon 7030045 7030177 7030045 ID=Msa1137970-mRNA-1:exon:1983;Parent=Msa1137970-mRNA-1
chr7_4 exon 7030359 7030554 7030359 ID=Msa1137970-mRNA-1:exon:1982;Parent=Msa1137970-mRNA-1
chr7_4 exon 7030929 7031091 7030929 ID=Msa1137970-mRNA-1:exon:1981;Parent=Msa1137970-mRNA-1
chr7_4 exon 7031978 7032163 7031978 ID=Msa1137970-mRNA-1:exon:1980;Parent=Msa1137970-mRNA-1
chr7_4 exon 7032489 7032698 7032489 ID=Msa1137970-mRNA-1:exon:1979;Parent=Msa1137970-mRNA-1
chr7_4 exon 7033989 7034156 7033989 ID=Msa1137970-mRNA-1:exon:1978;Parent=Msa1137970-mRNA-1
chr7_4 exon 7034236 7034377 7034236 ID=Msa1137970-mRNA-1:exon:1977;Parent=Msa1137970-mRNA-1
chr7_4 exon 7034709 7035251 7034709 ID=Msa1137970-mRNA-1:exon:1976;Parent=Msa1137970-mRNA-1
chr7_4 exon 7036859 7037639 7036859 ID=Msa1137970-mRNA-1:exon:1975;Parent=Msa1137970-mRNA-1
chr7_4 five_prime_UTR 7037308 7037639 7037308 ID=Msa1137970-mRNA-1:five_prime_utr;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7036859 7037307 7036859 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7034709 7035251 7034709 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7034236 7034377 7034236 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7033989 7034156 7033989 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7032489 7032698 7032489 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7031978 7032163 7031978 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7030929 7031091 7030929 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7030359 7030554 7030359 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7030045 7030177 7030045 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7029683 7029810 7029683 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
chr7_4 CDS 7029393 7029591 7029393 ID=Msa1137970-mRNA-1:cds;Parent=Msa1137970-mRNA-1
Gene Sequence

>Msa1137970

ATGCAACAATCTGCATCGCCGTCACCGGAAGCGATACTCGAATGGCTTCACAAAGAAATGGGATACAGACCACTCGGCCAATACGCCGCCGGCGCCGGAGGAAAATCGCATTCACCGTCAGTCGAATCGATCCGAAAAATCTGCCGTGGGAACATGATTCCGGTATGGAATTTCCTCGTAACGCGTGCGAAATCGGAGAAGACGGTTAGGAATGTGAGGAGGAATATTACGGTTCACGGTGAAGGGGATGGTGGTGGGAGGAAGAAGGAGAAGAGAGAAGGGGAGGAAGTGGAGGTTGCGTTGATGGAGAGGGATTCGGTGAAGAAGGAGGTTGAGAGGTTGAGGAATGTTGTGAGGAGACAGAGGAAGGATTTGAAAGCGAGGATGCTAGAGGTTTCGAGGGAAGAAGCGGAGAGGAAGAGGATGCTTGATGAACGGGCGAATTACAGGCATAAGCAAGTGATGTTGGAGGCCTATGACCGCCAATGTGATGAAGCTTCGAGAATATTTGCTGAATACCATAAACGTCTCTGTTACTATATAAATCAAGCAAGGGATGCTCAAAGATCAGGCGTGGATTCTTCCGTTGAAATGGTAAATAGTTTTAGTGCAAAAAATGAGAAGGAAGCTGTTTATTCTACTGTTAAGGGCAGTAAATCTTCAGATGATGTCATTGTCATTGAAACCACGAGGGAAAAGAATATTAGAAAGGCGTGTGAATCTCTTGTAGCTTACATGGTTGAGAAAATACAAAGTTCTTTTCCTGCTTACGAAGGAAGTGGCGTTCTAGCAAATCCTCAAGCAGAAGCAGCGAAGCTGGGGTTTGATTTTGATGGGCAGATTCCGGATGAGGTTAGAACAGTTATTGTGAATTGCCTAAAGAGTCCTCCCCTATTACTTCAGGCAATTACTGCATACACTTCTCACTTGAAAAGTCTAATATCCAGAGAAATAGAGAAAATTGATGTTAGAGCTGATGCAGAGATCTTGAGGTACAAATATGAAAATAACATAGTTATGGATGTTTCCTCTTCTGATGGGAGCTCTCCTCTACAGTATCCACTTTATGGAAATGGAAAACTTGGGGCTGATGTGCCTCCAGGAGGAAGTCAAAATCAGCTCCTTGAAAGACAGAAAGCTCATGTTCAGCAGTTTTTGGCTACTGAAGATGCACTAAACAATGCTGCAGAAGCAAGGGACTTGTGTGAAAAACTTATGAAACGTCTGCATGGAGGCACAGATGTTACTTCTCGTTCAATTGGAGCCACGTCTCAAAATGTTGGAAGTCTTAGACAACTTCAGCTAGATGTTTGGGCAAAGGAAAGAGAAGTTGCTGGTTTAAAGGCAAGTTTAAACACCTTGATGTCTGAAATACAACGCTTGAATAAGTTATGTGCCGAGAGGAAAGAAGCCGAAGATTCTCTGAAAAAAAAGTGGAAAAAGATTGAAGAGTTTGATGGTCGTAGATCAGAGCTCGAGTCCATATACACCGCACTTCTTAAAGCAAATACGGATGCTGCTTCATTTTGGAGTCAGCAACCATCCACTGCAAGGGAGTATGCTTTAAGCACTATAATTCCAGCATGTTCTGCTGTTGTTGAGACTTCAAATAGTGCAAAGGATCTTATTGAGAAAGAAGTGTCTGCTTTTTATCGGAGTCCAGATAATAGCCTCTACATGCTTCCTTCTTCACCACAGGCACTGCTTGAGGCCATCGGGTCCAGTGGATCATCTGGACAGGAAGCAGTTGCAAATGCAGAAATAAGTGCGGCTATTTTGACAGCAAGAGCCGGTGCTCGGGATCCGTCGGCAATTCCATCAATATGTCGGGTCTCAGCTGCACTTCAGTATGCTGCTGGTGGCTTGGAGGGTTCAGATGCTGGTCTAGCATCCGTACTGGAGTCCCTGGAGTTTTGCTTGAAACGTCGTGGTTCAGAAGCTAGTGTTTTGGAAGATTTATTAAAGGCTATTAATCTTGTCCATATTAGACGGGATCTTGTGCAAAGTGGTCATGCCTTGTTGAATCATGCCTACTTTGTTCAACAGGACTATGAAAGGACGACCAATTTTTCTTTAAATTTGGCAGCAGAACAAGAAAGAGCTGTCACGGAAAAATGGTTGCCTGAACTCAAGACTGGTGTTTTGAATGCTCAGCAGAGTTTGGAAGCTTGCAAATATGTTTGGGGATTGCTTGATGAGTGGTGGGAGCAACCGGCATCGACGGTTGTCGACTGGGTGACAGTGGATGGGCAAAATGTAGCTGCCTATTATAATCATGTGAAAAAGCTTCTAACATGTTATGATCAGGAGCTACTATTACTTTATATTCTTCAGCCTCGAGTTGCTGTGAAGCAGCCAGTACTTCAAGCATTTACTTTGGGATGGAATGTGCAGCTGTTGTTGTTATTGATAGACCAAGAAAACCTCAAGAACAAGAAAGAAACCTCTCCTCCTGTTGATTTTTTTAGATTCCCCCTTCTTTCTCTTCAGAAGTGTGATGTGTATTATAACTTATAA

Protein sequence

>Msa1137970

MQQSASPSPEAILEWLHKEMGYRPLGQYAAGAGGKSHSPSVESIRKICRGNMIPVWNFLVTRAKSEKTVRNVRRNITVHGEGDGGGRKKEKREGEEVEVALMERDSVKKEVERLRNVVRRQRKDLKARMLEVSREEAERKRMLDERANYRHKQVMLEAYDRQCDEASRIFAEYHKRLCYYINQARDAQRSGVDSSVEMVNSFSAKNEKEAVYSTVKGSKSSDDVIVIETTREKNIRKACESLVAYMVEKIQSSFPAYEGSGVLANPQAEAAKLGFDFDGQIPDEVRTVIVNCLKSPPLLLQAITAYTSHLKSLISREIEKIDVRADAEILRYKYENNIVMDVSSSDGSSPLQYPLYGNGKLGADVPPGGSQNQLLERQKAHVQQFLATEDALNNAAEARDLCEKLMKRLHGGTDVTSRSIGATSQNVGSLRQLQLDVWAKEREVAGLKASLNTLMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDGRRSELESIYTALLKANTDAASFWSQQPSTAREYALSTIIPACSAVVETSNSAKDLIEKEVSAFYRSPDNSLYMLPSSPQALLEAIGSSGSSGQEAVANAEISAAILTARAGARDPSAIPSICRVSAALQYAAGGLEGSDAGLASVLESLEFCLKRRGSEASVLEDLLKAINLVHIRRDLVQSGHALLNHAYFVQQDYERTTNFSLNLAAEQERAVTEKWLPELKTGVLNAQQSLEACKYVWGLLDEWWEQPASTVVDWVTVDGQNVAAYYNHVKKLLTCYDQELLLLYILQPRVAVKQPVLQAFTLGWNVQLLLLLIDQENLKNKKETSPPVDFFRFPLLSLQKCDVYYNL*