AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0618950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618950 MtrunA17_Chr8g0383571 99.546 441 2 0 10 450 1 441 0.0 894
Msa0618950 MtrunA17_Chr8g0383531 97.489 438 11 0 13 450 1 438 0.0 871
Msa0618950 MtrunA17_Chr5g0431161 48.352 91 47 0 110 200 35 125 4.20e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618950 AT5G09900.2 81.633 441 80 1 10 449 1 441 0.0 729
Msa0618950 AT5G09900.1 81.179 441 82 1 10 449 1 441 0.0 726
Msa0618950 AT5G64760.2 78.685 441 93 1 10 449 1 441 0.0 697
Msa0618950 AT5G64760.1 78.458 441 94 1 10 449 1 441 0.0 695
Msa0618950 AT5G64760.3 80.048 421 83 1 30 449 1 421 0.0 679
Msa0618950 AT5G09900.3 79.070 344 71 1 10 352 1 344 0.0 547

Find 109 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTTCAAAGCTGCTTTA+TGG 0.134030 4_2:-69925827 None:intergenic
AAACAACGATCTGATCATTT+AGG 0.167639 4_2:-69921419 None:intergenic
GACCATATTATCACCTTCTT+TGG 0.222140 4_2:-69922858 None:intergenic
CATTTGAGTATATGTAAATT+TGG 0.222921 4_2:+69926456 Msa0618950:three_prime_UTR
TGAAATTTGCCGCTGCTATA+AGG 0.251024 4_2:+69924703 Msa0618950:CDS
CATTGCTATCCTTTGCTGTT+TGG 0.295822 4_2:-69925716 None:intergenic
AACAACGATCTGATCATTTA+GGG 0.304111 4_2:-69921418 None:intergenic
CTTCGATCGATTCTCTTTCA+TGG 0.311242 4_2:+69921170 Msa0618950:CDS
CAAGAAACTTGCCAAGATTA+AGG 0.314974 4_2:+69922402 Msa0618950:CDS
TCTTATCAGGTGGAAACTTT+TGG 0.318210 4_2:+69922582 Msa0618950:intron
TCATCCAATGGACAGCTCTT+TGG 0.322854 4_2:+69925136 Msa0618950:CDS
GTCCTTCATATTCTTTCGTT+TGG 0.324083 4_2:+69926326 Msa0618950:three_prime_UTR
TGCCTCCTCAATATGTGATA+TGG 0.330493 4_2:+69926027 Msa0618950:CDS
CATCCAATGGACAGCTCTTT+GGG 0.333432 4_2:+69925137 Msa0618950:CDS
ATACCTTACCACCGACTTAC+CGG 0.339321 4_2:+69926251 Msa0618950:three_prime_UTR
CCCCTGTTCTTCCTTAATCT+TGG 0.345178 4_2:-69922413 None:intergenic
ACCATATTATCACCTTCTTT+GGG 0.346638 4_2:-69922857 None:intergenic
AGGATAACATACTGGAAGTT+TGG 0.347252 4_2:-69924994 None:intergenic
TATGGACTGAAGTTGCCTTA+TGG 0.366194 4_2:+69926045 Msa0618950:CDS
GTTCAGGCCATTATGCGTTC+AGG 0.367944 4_2:+69926145 Msa0618950:CDS
ATGGACTGAAGTTGCCTTAT+GGG 0.381336 4_2:+69926046 Msa0618950:CDS
TAACTCATGGGCAGCAAACT+TGG 0.387347 4_2:+69925746 Msa0618950:CDS
TGCCAAGATTAAGGAAGAAC+AGG 0.388343 4_2:+69922411 Msa0618950:CDS
TTTATTACGAGCTAATGATT+AGG 0.390801 4_2:+69922927 Msa0618950:CDS
ATTCGACATAGATGCATCTA+AGG 0.393010 4_2:+69922823 Msa0618950:CDS
TGCAGATATTCCGTCTCTAC+TGG 0.398939 4_2:+69922892 Msa0618950:CDS
TAGATCAAACATTATCATAA+AGG 0.400969 4_2:-69926425 None:intergenic
TATCTACCCTGAACGCATAA+TGG 0.404083 4_2:-69926152 None:intergenic
GCCCAAAGAAGGTGATAATA+TGG 0.427248 4_2:+69922856 Msa0618950:CDS
TTCAAGATAATCATTGTTGT+GGG 0.433017 4_2:-69924684 None:intergenic
GGTCCATAAAGCAGCTTTGA+AGG 0.436788 4_2:+69925824 Msa0618950:CDS
TGAGAAGCATCTGTCTGATA+TGG 0.444884 4_2:+69925638 Msa0618950:CDS
ATAATGGCCTGAACGCATAA+TGG 0.449078 4_2:-69926136 None:intergenic
TCAATACGAGTTTCAATATC+CGG 0.449985 4_2:-69922198 None:intergenic
ATGTTGAGATTGAGAGAGCT+AGG 0.451064 4_2:+69922374 Msa0618950:CDS
GCATCTATGTCGAATACTCT+TGG 0.459620 4_2:-69922815 None:intergenic
TTTCAAGATAATCATTGTTG+TGG 0.472189 4_2:-69924685 None:intergenic
AACTACATACAAGACCGTTT+AGG 0.477075 4_2:-69926281 None:intergenic
TTCGTTTCTGTAGGCAAACA+TGG 0.483039 4_2:+69921263 Msa0618950:intron
TATGGTTGTTACCAAGGCTC+TGG 0.489637 4_2:+69925656 Msa0618950:CDS
TCGATTGTGCCTAGACCGCC+AGG 0.490883 4_2:+69922754 Msa0618950:CDS
TAGGATCTTGTCCGGTAAGT+CGG 0.493217 4_2:-69926262 None:intergenic
ACGGTCTTGTATGTAGTTAG+TGG 0.500674 4_2:+69926286 Msa0618950:three_prime_UTR
GGAGAAACTGCTTGATCTTG+TGG 0.501917 4_2:+69925767 Msa0618950:CDS
CAAGGTGGAATTTAAAAGAC+TGG 0.502902 4_2:-69924947 None:intergenic
TTTGACAATGAGATGGCCTC+TGG 0.504799 4_2:+69925177 Msa0618950:CDS
AATCTTTGCAACCAGAGCCT+TGG 0.507062 4_2:-69925667 None:intergenic
GCAAAGATTGACAGACCAAT+GGG 0.508334 4_2:+69925681 Msa0618950:CDS
TTGTATCAAAATACTATGCA+AGG 0.512334 4_2:+69925376 Msa0618950:CDS
GCAATGATGTACTTAACTCA+TGG 0.517832 4_2:+69925733 Msa0618950:CDS
TTACCGGACAAGATCCTAAA+CGG 0.522572 4_2:+69926267 Msa0618950:three_prime_UTR
TTCAGGCCATTATGCGTTCA+GGG 0.522927 4_2:+69926146 Msa0618950:CDS
ACATTGAACAGTGTATCTGC+TGG 0.524074 4_2:+69922231 Msa0618950:CDS
GGACATAATCCTGGCGGTCT+AGG 0.525396 4_2:-69922763 None:intergenic
TCTCCCAAAGAGCTGTCCAT+TGG 0.527502 4_2:-69925140 None:intergenic
TTCAAATGAGAATCCCCATA+AGG 0.527715 4_2:-69926060 None:intergenic
CAAAGCTGCTTTATGGACCA+TGG 0.531327 4_2:-69925820 None:intergenic
ACGACGCGGTCAGCTCAAGC+AGG 0.533278 4_2:+69921449 Msa0618950:CDS
TTTGTGCACGGACATAATCC+TGG 0.535226 4_2:-69922772 None:intergenic
AGACCGTTTAGGATCTTGTC+CGG 0.536612 4_2:-69926270 None:intergenic
GTCTGATATGGTTGTTACCA+AGG 0.537128 4_2:+69925650 Msa0618950:CDS
TGTAACAGCTATGGTACAGC+AGG 0.546142 4_2:+69922152 Msa0618950:CDS
TGAAATGTTGCTCACTGTGT+TGG 0.548481 4_2:+69926079 Msa0618950:CDS
TGGAAACAGACTATTCCCAT+TGG 0.557174 4_2:-69925696 None:intergenic
TGAGATTGAGAGAGCTAGGT+TGG 0.557330 4_2:+69922378 Msa0618950:CDS
TTCTTGAGAGTATTTGTGCA+CGG 0.563823 4_2:-69922784 None:intergenic
AGTAGAGACGGAATATCTGC+AGG 0.564085 4_2:-69922890 None:intergenic
TTTATTGTGCAAGTGCAGCT+TGG 0.568018 4_2:+69926385 Msa0618950:three_prime_UTR
CATTGAACAGTGTATCTGCT+GGG 0.568762 4_2:+69922232 Msa0618950:CDS
TGTCCGGTAAGTCGGTGGTA+AGG 0.572093 4_2:-69926254 None:intergenic
TGCAAAGATTGACAGACCAA+TGG 0.572504 4_2:+69925680 Msa0618950:CDS
GAGGAAAATATGTTGGTGCT+TGG 0.574826 4_2:+69924897 Msa0618950:CDS
TGGACTGAAGTTGCCTTATG+GGG 0.576818 4_2:+69926047 Msa0618950:CDS
GAGAAACAAATGCGTCTCGC+CGG 0.580321 4_2:+69921324 Msa0618950:CDS
CGTCTCGCCGGCGAAATAGT+CGG 0.582458 4_2:+69921336 Msa0618950:CDS
ATCACAGGCTGTAACAGCTA+TGG 0.585065 4_2:+69922143 Msa0618950:intron
CAATGATGTACTTAACTCAT+GGG 0.587731 4_2:+69925734 Msa0618950:CDS
TCTAGTGCCGACTATTTCGC+CGG 0.590784 4_2:-69921343 None:intergenic
GACCAAACGAAAGAATATGA+AGG 0.591717 4_2:-69926328 None:intergenic
TTTAAAAGACTGGACTGCAT+CGG 0.598019 4_2:-69924937 None:intergenic
TGATTTGATGCAAGAAATTG+CGG 0.598896 4_2:+69922453 Msa0618950:CDS
AGATCCTGAGGAAAATATGT+TGG 0.600984 4_2:+69924890 Msa0618950:intron
AGATAGATTTCTATCCTCCA+AGG 0.603704 4_2:-69924965 None:intergenic
TTTGAAGCAGCTGGTCACCA+TGG 0.604172 4_2:+69925110 Msa0618950:CDS
TGTTTCAACTCCAGTAGAGA+CGG 0.610635 4_2:-69922902 None:intergenic
CATATATTGCCTTATAGCAG+CGG 0.613022 4_2:-69924712 None:intergenic
GCAATATATTGACGAGACAC+CGG 0.613740 4_2:+69922179 Msa0618950:CDS
TCAGTCCATATCACATATTG+AGG 0.615157 4_2:-69926032 None:intergenic
AGGTGATAATATGGTCGAAG+AGG 0.618539 4_2:+69922865 Msa0618950:CDS
GAACGAGTTTGACAATGAGA+TGG 0.619618 4_2:+69925170 Msa0618950:CDS
CCTACCGGAATAAAATCAGT+AGG 0.625120 4_2:-69924758 None:intergenic
GCCAAGATTAAGGAAGAACA+GGG 0.626902 4_2:+69922412 Msa0618950:CDS
AATTTCTTGCATCAAATCAG+CGG 0.629438 4_2:-69922449 None:intergenic
TCACCATGGAAGTCATCCAA+TGG 0.630891 4_2:+69925124 Msa0618950:CDS
GAACAGTGTATCTGCTGGGA+AGG 0.631990 4_2:+69922236 Msa0618950:CDS
AGTCTGTTTCCAAACAGCAA+AGG 0.634017 4_2:+69925707 Msa0618950:CDS
CTGGACTGCATCGGTGAATG+TGG 0.634478 4_2:-69924928 None:intergenic
GTCCATATCACATATTGAGG+AGG 0.639905 4_2:-69926029 None:intergenic
TCAAATACACAAGGAAACCA+TGG 0.640379 4_2:+69925803 Msa0618950:CDS
AGAACAGGGGCTTATAGCTG+AGG 0.642737 4_2:+69922426 Msa0618950:CDS
GATCTTGTCCGGTAAGTCGG+TGG 0.660906 4_2:-69926259 None:intergenic
TGTTGCTCACTGTGTTGGTG+AGG 0.668735 4_2:+69926084 Msa0618950:CDS
TCTTGCATATACAGATCCTG+AGG 0.670391 4_2:+69924878 Msa0618950:intron
GAGCTGTCATCAAATACACA+AGG 0.670564 4_2:+69925794 Msa0618950:CDS
TAGATTTCTATCCTCCAAGG+TGG 0.684299 4_2:-69924962 None:intergenic
TGTCCATTGGATGACTTCCA+TGG 0.689019 4_2:-69925127 None:intergenic
GAATCGATCGAAGATTACCA+TGG 0.715474 4_2:-69921160 None:intergenic
CCAAGATTAAGGAAGAACAG+GGG 0.732046 4_2:+69922413 Msa0618950:CDS
GTGCACGGACATAATCCTGG+CGG 0.759607 4_2:-69922769 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAAATGATTTAATTTT+TGG - chr4_2:69924334-69924353 None:intergenic 10.0%
!!! TTTTTAAATTTATTTGTGTT+TGG + chr4_2:69924383-69924402 Msa0618950:intron 10.0%
!!! TTTTAAATTTATTTGTGTTT+GGG + chr4_2:69924384-69924403 Msa0618950:intron 10.0%
!! AAAAAAAATAAAAAAGAGTA+AGG - chr4_2:69925273-69925292 None:intergenic 10.0%
!!! TTAGTTTATTTCTTTTTTAA+AGG + chr4_2:69925576-69925595 Msa0618950:intron 10.0%
!!! TAGTTTATTTCTTTTTTAAA+GGG + chr4_2:69925577-69925596 Msa0618950:intron 10.0%
!! AAGTTCATAAAATTACTAAT+AGG - chr4_2:69921681-69921700 None:intergenic 15.0%
!! AATTATACAACAACAATATA+TGG - chr4_2:69922067-69922086 None:intergenic 15.0%
!! AAAAACAATAAAAATACAGA+AGG - chr4_2:69922509-69922528 None:intergenic 15.0%
!!! TTCTGTATTTTTATTGTTTT+TGG + chr4_2:69922508-69922527 Msa0618950:intron 15.0%
!! GTTAATAATTAAAAACTTGT+TGG - chr4_2:69923502-69923521 None:intergenic 15.0%
!!! AGTTTATTTCTTTTTTAAAG+GGG + chr4_2:69925578-69925597 Msa0618950:intron 15.0%
!! AATATTACTTCAGAAATAAA+TGG - chr4_2:69925960-69925979 None:intergenic 15.0%
!!! TTTATTTCTGAAGTAATATT+TGG + chr4_2:69925960-69925979 Msa0618950:intron 15.0%
!! TTTCAATTGTAGATTTCTTA+TGG + chr4_2:69921573-69921592 Msa0618950:intron 20.0%
!! AATAAGTTGTTTATCCAAAA+AGG - chr4_2:69921782-69921801 None:intergenic 20.0%
!!! CTTAATTAAGTTTTATCTGT+AGG + chr4_2:69921850-69921869 Msa0618950:intron 20.0%
!!! AAAACATATGTCCTTTAAAA+TGG - chr4_2:69922320-69922339 None:intergenic 20.0%
!!! TTTCTAATAAGTTACTGATT+TGG + chr4_2:69922704-69922723 Msa0618950:intron 20.0%
!!! TTCTAATAAGTTACTGATTT+GGG + chr4_2:69922705-69922724 Msa0618950:intron 20.0%
!! CAAATATAAATAATTGCAGT+CGG - chr4_2:69923256-69923275 None:intergenic 20.0%
!! AACTTATATCATTAGTAACA+AGG - chr4_2:69923586-69923605 None:intergenic 20.0%
!!! AAGTTCAAACTCATTTTATA+TGG - chr4_2:69923967-69923986 None:intergenic 20.0%
!! AGTAATGTAAAGTAAAGAAT+TGG + chr4_2:69924435-69924454 Msa0618950:intron 20.0%
!! ATAAGGAAGAAAAAAAAATC+AGG - chr4_2:69924631-69924650 None:intergenic 20.0%
!! TACTATAAGATTCTGTTATA+CGG + chr4_2:69924815-69924834 Msa0618950:intron 20.0%
!! ATATTTGAACATGATTAGAA+AGG - chr4_2:69925036-69925055 None:intergenic 20.0%
!!! CTGTTAATAACTTTTTCTTA+TGG + chr4_2:69925471-69925490 Msa0618950:intron 20.0%
!!! AGTATGTAATTTTTGAAGAA+TGG + chr4_2:69925923-69925942 Msa0618950:intron 20.0%
!! TTAATCATAATGCTTATTTC+TGG + chr4_2:69925994-69926013 Msa0618950:intron 20.0%
!! TAGATCAAACATTATCATAA+AGG - chr4_2:69926428-69926447 None:intergenic 20.0%
!! CATTTGAGTATATGTAAATT+TGG + chr4_2:69926456-69926475 Msa0618950:three_prime_UTR 20.0%
!!! TTGGGTTTTATTTAATCGAT+TGG + chr4_2:69921507-69921526 Msa0618950:intron 25.0%
!!! GTTTTATTTAATCGATTGGT+AGG + chr4_2:69921511-69921530 Msa0618950:intron 25.0%
!! TAAATTTTGTGAGACTGTAT+GGG - chr4_2:69922006-69922025 None:intergenic 25.0%
!! ATAAATTTTGTGAGACTGTA+TGG - chr4_2:69922007-69922026 None:intergenic 25.0%
! GAGAAGATAATAAAACAGAA+TGG - chr4_2:69922285-69922304 None:intergenic 25.0%
!! CTTAGCATTATCCATTTTAA+AGG + chr4_2:69922306-69922325 Msa0618950:intron 25.0%
! ACACAATACAACATACAAAT+TGG - chr4_2:69922344-69922363 None:intergenic 25.0%
! TCTTCTACGTTAAATTGTTT+AGG + chr4_2:69922730-69922749 Msa0618950:intron 25.0%
! TTTATTACGAGCTAATGATT+AGG + chr4_2:69922927-69922946 Msa0618950:CDS 25.0%
!! ATGTCCTATACTGTTAATTT+TGG + chr4_2:69923192-69923211 Msa0618950:intron 25.0%
! GATTCCAAAATTAACAGTAT+AGG - chr4_2:69923199-69923218 None:intergenic 25.0%
!!! ATTTTGGAATCTGAAAGATA+AGG + chr4_2:69923208-69923227 Msa0618950:intron 25.0%
!! ATCCTTTTTATCTATATCTG+TGG + chr4_2:69923392-69923411 Msa0618950:intron 25.0%
!! TCCTTTTTATCTATATCTGT+GGG + chr4_2:69923393-69923412 Msa0618950:intron 25.0%
!!! TGTTTTAATTCTTAGCTTGA+TGG + chr4_2:69923522-69923541 Msa0618950:intron 25.0%
! GTTATCTTGTACTGTATTTA+TGG + chr4_2:69923658-69923677 Msa0618950:intron 25.0%
! AGATTTGATACAAAATCGAT+GGG - chr4_2:69923789-69923808 None:intergenic 25.0%
! AAGATTTGATACAAAATCGA+TGG - chr4_2:69923790-69923809 None:intergenic 25.0%
! TGGAATTGGAAAGAAAATAA+GGG - chr4_2:69923845-69923864 None:intergenic 25.0%
! TTGGAATTGGAAAGAAAATA+AGG - chr4_2:69923846-69923865 None:intergenic 25.0%
!!! AACTTTGGAAATTTTGGAAT+TGG - chr4_2:69923859-69923878 None:intergenic 25.0%
! TTTCAGAATAGTTAAGAACT+GGG - chr4_2:69923921-69923940 None:intergenic 25.0%
!!! TATTCTGAAACAAAGCATTA+TGG + chr4_2:69923931-69923950 Msa0618950:intron 25.0%
!! ATTTTTCACAACAGTATCAA+TGG - chr4_2:69924052-69924071 None:intergenic 25.0%
! TTCATTTGAATTATGTGTGA+AGG + chr4_2:69924202-69924221 Msa0618950:intron 25.0%
! TCATTTGAATTATGTGTGAA+GGG + chr4_2:69924203-69924222 Msa0618950:intron 25.0%
!!! TTTTTTTTTCTTCCTTATGC+TGG + chr4_2:69924633-69924652 Msa0618950:intron 25.0%
! TTCAAGATAATCATTGTTGT+GGG - chr4_2:69924687-69924706 None:intergenic 25.0%
! TTTCAAGATAATCATTGTTG+TGG - chr4_2:69924688-69924707 None:intergenic 25.0%
!!! AAATCCTACTGATTTTATTC+CGG + chr4_2:69924754-69924773 Msa0618950:CDS 25.0%
! GTATATGCAAGAACAATATT+TGG - chr4_2:69924870-69924889 None:intergenic 25.0%
! TTGTATCAAAATACTATGCA+AGG + chr4_2:69925376-69925395 Msa0618950:CDS 25.0%
! CAAAGAAAAAACTATATCCT+TGG + chr4_2:69925513-69925532 Msa0618950:intron 25.0%
! TTATGCAAGAGTAATTGATT+AGG - chr4_2:69925608-69925627 None:intergenic 25.0%
! TGCACAATAAAATCAAAAAG+TGG - chr4_2:69926376-69926395 None:intergenic 25.0%
AACAACGATCTGATCATTTA+GGG - chr4_2:69921421-69921440 None:intergenic 30.0%
AAACAACGATCTGATCATTT+AGG - chr4_2:69921422-69921441 None:intergenic 30.0%
! AAATTGATGCGTTTTGTGTT+AGG + chr4_2:69921482-69921501 Msa0618950:intron 30.0%
! AATTGATGCGTTTTGTGTTA+GGG + chr4_2:69921483-69921502 Msa0618950:intron 30.0%
TTTAATCGATTGGTAGGTTT+AGG + chr4_2:69921517-69921536 Msa0618950:intron 30.0%
TTAATCGATTGGTAGGTTTA+GGG + chr4_2:69921518-69921537 Msa0618950:intron 30.0%
! TGTGTAGTTAGAAAGAGTTT+TGG + chr4_2:69921612-69921631 Msa0618950:intron 30.0%
! GTGTAGTTAGAAAGAGTTTT+GGG + chr4_2:69921613-69921632 Msa0618950:intron 30.0%
!!! TACGTTGTTTTAGACTTCAA+AGG + chr4_2:69921638-69921657 Msa0618950:intron 30.0%
!! GTTGTTTTCATATGCTATCT+TGG + chr4_2:69921915-69921934 Msa0618950:intron 30.0%
!! TGTCATAAGCTGTTTTCATA+AGG + chr4_2:69921977-69921996 Msa0618950:intron 30.0%
TTAAATAAGCCAATCCAAAC+AGG + chr4_2:69922041-69922060 Msa0618950:intron 30.0%
! GTGAGAATCGTGATATTTTA+CGG + chr4_2:69922097-69922116 Msa0618950:intron 30.0%
TCAATACGAGTTTCAATATC+CGG - chr4_2:69922201-69922220 None:intergenic 30.0%
AATTTCTTGCATCAAATCAG+CGG - chr4_2:69922452-69922471 None:intergenic 30.0%
TGATTTGATGCAAGAAATTG+CGG + chr4_2:69922453-69922472 Msa0618950:CDS 30.0%
ATGTAATGTGCAATCTTATC+AGG + chr4_2:69922569-69922588 Msa0618950:intron 30.0%
TTAGTGATGACAGAAATAGT+AGG + chr4_2:69922665-69922684 Msa0618950:intron 30.0%
ACCATATTATCACCTTCTTT+GGG - chr4_2:69922860-69922879 None:intergenic 30.0%
AAGAAATACTACAACGAAAC+AGG - chr4_2:69922970-69922989 None:intergenic 30.0%
!! TTCAGTTTCATTCACTTTTG+AGG + chr4_2:69923108-69923127 Msa0618950:intron 30.0%
!! TTCATTCACTTTTGAGGATA+TGG + chr4_2:69923114-69923133 Msa0618950:intron 30.0%
AATTTGAGTAAACACAAGCA+AGG - chr4_2:69923317-69923336 None:intergenic 30.0%
TCCCACAGATATAGATAAAA+AGG - chr4_2:69923397-69923416 None:intergenic 30.0%
!! CTATGATTTGTTTCTATGCT+TGG + chr4_2:69923417-69923436 Msa0618950:intron 30.0%
CCTAAGAAACTTAGATCATT+AGG - chr4_2:69923636-69923655 None:intergenic 30.0%
CCTAATGATCTAAGTTTCTT+AGG + chr4_2:69923633-69923652 Msa0618950:intron 30.0%
! TATTTATGGATTGCTAGAGT+TGG + chr4_2:69923672-69923691 Msa0618950:intron 30.0%
!! AGGGATAACTTTGGAAATTT+TGG - chr4_2:69923865-69923884 None:intergenic 30.0%
GTTTCAGAATAGTTAAGAAC+TGG - chr4_2:69923922-69923941 None:intergenic 30.0%
AGTATCAATGGTAAAAGACA+AGG - chr4_2:69924040-69924059 None:intergenic 30.0%
AGCAGCATAAATATAAACGA+CGG - chr4_2:69924166-69924185 None:intergenic 30.0%
CACACATAATTCAAATGAAC+AGG - chr4_2:69924201-69924220 None:intergenic 30.0%
!! AATTGTTGTTTGTCTACTGT+TGG + chr4_2:69924280-69924299 Msa0618950:intron 30.0%
!! CTACATATTTTTCTAGTACC+TGG + chr4_2:69924581-69924600 Msa0618950:intron 30.0%
AGTAAGAAATATCATGAACC+AGG - chr4_2:69924602-69924621 None:intergenic 30.0%
! ATCAGTAGGATTTTCTTTGA+TGG - chr4_2:69924747-69924766 None:intergenic 30.0%
TGAAAGATAGGATAACATAC+TGG - chr4_2:69925005-69925024 None:intergenic 30.0%
! TGTTTAGAATTCCTTGTCAT+TGG + chr4_2:69925058-69925077 Msa0618950:intron 30.0%
! TACAACAAGAATGTTCTGAA+AGG - chr4_2:69925361-69925380 None:intergenic 30.0%
!! TAACTTTTTCTTATGGTGTG+TGG + chr4_2:69925478-69925497 Msa0618950:intron 30.0%
!! AACTTTTTCTTATGGTGTGT+GGG + chr4_2:69925479-69925498 Msa0618950:intron 30.0%
CAATTACTCTTGCATAATTC+AGG + chr4_2:69925611-69925630 Msa0618950:intron 30.0%
CAATGATGTACTTAACTCAT+GGG + chr4_2:69925734-69925753 Msa0618950:CDS 30.0%
ACAGTGAGAAAATTTGAGAA+AGG - chr4_2:69925878-69925897 None:intergenic 30.0%
! GCTTTTCATTTCGTTTCTGT+AGG + chr4_2:69921254-69921273 Msa0618950:intron 35.0%
!! ATTTAGGGTTTTCCATGCTT+TGG - chr4_2:69921406-69921425 None:intergenic 35.0%
! TTTGGTTCGCTTGAAACTAT+CGG + chr4_2:69921542-69921561 Msa0618950:intron 35.0%
ACTGTTCAGTTCAGATACTA+TGG + chr4_2:69921755-69921774 Msa0618950:intron 35.0%
! TCAGATACTATGGTCCTTTT+TGG + chr4_2:69921765-69921784 Msa0618950:intron 35.0%
AATATATGGCCTGTTTGGAT+TGG - chr4_2:69922053-69922072 None:intergenic 35.0%
ACAACAATATATGGCCTGTT+TGG - chr4_2:69922058-69922077 None:intergenic 35.0%
AGCCTACTATATACTATCAC+AGG + chr4_2:69922128-69922147 Msa0618950:intron 35.0%
AGCCTGTGATAGTATATAGT+AGG - chr4_2:69922133-69922152 None:intergenic 35.0%
CAAGAAACTTGCCAAGATTA+AGG + chr4_2:69922402-69922421 Msa0618950:CDS 35.0%
TAATGTGCAATCTTATCAGG+TGG + chr4_2:69922572-69922591 Msa0618950:intron 35.0%
! TCTTATCAGGTGGAAACTTT+TGG + chr4_2:69922582-69922601 Msa0618950:intron 35.0%
!! TTCTTGAGAGTATTTGTGCA+CGG - chr4_2:69922787-69922806 None:intergenic 35.0%
ATTCGACATAGATGCATCTA+AGG + chr4_2:69922823-69922842 Msa0618950:CDS 35.0%
GAAAAGAAAAAGCCCAAAGA+AGG + chr4_2:69922845-69922864 Msa0618950:CDS 35.0%
GACCATATTATCACCTTCTT+TGG - chr4_2:69922861-69922880 None:intergenic 35.0%
! ACTTGTAGTTACAAGTACTG+TGG + chr4_2:69922999-69923018 Msa0618950:intron 35.0%
GTAGATACTCTAAATTGTCC+TGG + chr4_2:69923074-69923093 Msa0618950:intron 35.0%
!!! TGAGGATATGGTTTTGATGT+TGG + chr4_2:69923126-69923145 Msa0618950:intron 35.0%
GACATTAATGCATCACTGTT+AGG - chr4_2:69923177-69923196 None:intergenic 35.0%
!! TTGTTTCTATGCTTGGCATT+TGG + chr4_2:69923424-69923443 Msa0618950:intron 35.0%
GATGAAAAGTAGGGATGAAA+GGG - chr4_2:69923884-69923903 None:intergenic 35.0%
AGATGAAAAGTAGGGATGAA+AGG - chr4_2:69923885-69923904 None:intergenic 35.0%
GCAGACAAAGATGAAAAGTA+GGG - chr4_2:69923893-69923912 None:intergenic 35.0%
AGCAGACAAAGATGAAAAGT+AGG - chr4_2:69923894-69923913 None:intergenic 35.0%
AAGGAATCCAAATGTTAGGA+AGG - chr4_2:69924021-69924040 None:intergenic 35.0%
AGACAAGGAATCCAAATGTT+AGG - chr4_2:69924025-69924044 None:intergenic 35.0%
AAAACATGTTGCAAGAGTGA+AGG - chr4_2:69924309-69924328 None:intergenic 35.0%
AAGTAAAGAATTGGTCACAG+TGG + chr4_2:69924444-69924463 Msa0618950:intron 35.0%
ACCCAAGTTTAGAAAGCTAT+GGG - chr4_2:69924491-69924510 None:intergenic 35.0%
AACCCAAGTTTAGAAAGCTA+TGG - chr4_2:69924492-69924511 None:intergenic 35.0%
CATATATTGCCTTATAGCAG+CGG - chr4_2:69924715-69924734 None:intergenic 35.0%
! GTAGGATTTTCTTTGATGGA+CGG - chr4_2:69924743-69924762 None:intergenic 35.0%
AAAGAGAATAGAAAGCCTAC+CGG - chr4_2:69924776-69924795 None:intergenic 35.0%
AGATCCTGAGGAAAATATGT+TGG + chr4_2:69924890-69924909 Msa0618950:intron 35.0%
TTTAAAAGACTGGACTGCAT+CGG - chr4_2:69924940-69924959 None:intergenic 35.0%
CAAGGTGGAATTTAAAAGAC+TGG - chr4_2:69924950-69924969 None:intergenic 35.0%
! CAGTCTTTTAAATTCCACCT+TGG + chr4_2:69924948-69924967 Msa0618950:CDS 35.0%
! TCTTTTAAATTCCACCTTGG+AGG + chr4_2:69924951-69924970 Msa0618950:CDS 35.0%
AGATAGATTTCTATCCTCCA+AGG - chr4_2:69924968-69924987 None:intergenic 35.0%
AGGATAACATACTGGAAGTT+TGG - chr4_2:69924997-69925016 None:intergenic 35.0%
AAGGATGAGAGATGAAAGAT+AGG - chr4_2:69925017-69925036 None:intergenic 35.0%
TTCACTCAAAAACTTTCCAG+AGG - chr4_2:69925196-69925215 None:intergenic 35.0%
!! ACTTTTTCTTATGGTGTGTG+GGG + chr4_2:69925480-69925499 Msa0618950:intron 35.0%
ATATCCTTGGAAAGTGAATG+TGG + chr4_2:69925526-69925545 Msa0618950:intron 35.0%
GCAATGATGTACTTAACTCA+TGG + chr4_2:69925733-69925752 Msa0618950:CDS 35.0%
TCAAATACACAAGGAAACCA+TGG + chr4_2:69925803-69925822 Msa0618950:CDS 35.0%
! AAACCTTCAAAGCTGCTTTA+TGG - chr4_2:69925830-69925849 None:intergenic 35.0%
! CTTTGAAGGTTTAAGAAGGT+AGG + chr4_2:69925838-69925857 Msa0618950:intron 35.0%
AAGAAGGTAGGTCCATATAT+CGG + chr4_2:69925850-69925869 Msa0618950:intron 35.0%
!! TGCTTATTTCTGGTCATTTC+AGG + chr4_2:69926004-69926023 Msa0618950:intron 35.0%
TCAGTCCATATCACATATTG+AGG - chr4_2:69926035-69926054 None:intergenic 35.0%
TTCAAATGAGAATCCCCATA+AGG - chr4_2:69926063-69926082 None:intergenic 35.0%
! TATTTTGCCATTATGCGTTC+AGG + chr4_2:69926129-69926148 Msa0618950:CDS 35.0%
AACTACATACAAGACCGTTT+AGG - chr4_2:69926284-69926303 None:intergenic 35.0%
GTCCTTCATATTCTTTCGTT+TGG + chr4_2:69926326-69926345 Msa0618950:three_prime_UTR 35.0%
GACCAAACGAAAGAATATGA+AGG - chr4_2:69926331-69926350 None:intergenic 35.0%
! CTTCGATCGATTCTCTTTCA+TGG + chr4_2:69921170-69921189 Msa0618950:CDS 40.0%
AGCGTGAGATTAACAGTGAA+GGG - chr4_2:69921228-69921247 None:intergenic 40.0%
TAGCGTGAGATTAACAGTGA+AGG - chr4_2:69921229-69921248 None:intergenic 40.0%
TTCGTTTCTGTAGGCAAACA+TGG + chr4_2:69921263-69921282 Msa0618950:intron 40.0%
!!! TCTGTTTTGAAGCCAAAGCA+TGG + chr4_2:69921391-69921410 Msa0618950:CDS 40.0%
!! GTTGTTTTGTCTAAACGACG+CGG + chr4_2:69921435-69921454 Msa0618950:CDS 40.0%
! ATGCGTTTTGTGTTAGGGTT+TGG + chr4_2:69921488-69921507 Msa0618950:intron 40.0%
! TGCGTTTTGTGTTAGGGTTT+GGG + chr4_2:69921489-69921508 Msa0618950:intron 40.0%
!! GATTGGTAGGTTTAGGGTTT+TGG + chr4_2:69921524-69921543 Msa0618950:intron 40.0%
GCAATATATTGACGAGACAC+CGG + chr4_2:69922179-69922198 Msa0618950:CDS 40.0%
ACATTGAACAGTGTATCTGC+TGG + chr4_2:69922231-69922250 Msa0618950:CDS 40.0%
CATTGAACAGTGTATCTGCT+GGG + chr4_2:69922232-69922251 Msa0618950:CDS 40.0%
ATGTTGAGATTGAGAGAGCT+AGG + chr4_2:69922374-69922393 Msa0618950:CDS 40.0%
TGCCAAGATTAAGGAAGAAC+AGG + chr4_2:69922411-69922430 Msa0618950:CDS 40.0%
GCCAAGATTAAGGAAGAACA+GGG + chr4_2:69922412-69922431 Msa0618950:CDS 40.0%
CCAAGATTAAGGAAGAACAG+GGG + chr4_2:69922413-69922432 Msa0618950:CDS 40.0%
GCATCTATGTCGAATACTCT+TGG - chr4_2:69922818-69922837 None:intergenic 40.0%
GCCCAAAGAAGGTGATAATA+TGG + chr4_2:69922856-69922875 Msa0618950:CDS 40.0%
AGGTGATAATATGGTCGAAG+AGG + chr4_2:69922865-69922884 Msa0618950:CDS 40.0%
TGTTTCAACTCCAGTAGAGA+CGG - chr4_2:69922905-69922924 None:intergenic 40.0%
AACTGAAAACGCAGAAAACC+AGG - chr4_2:69923095-69923114 None:intergenic 40.0%
! TTATGGATTGCTAGAGTTGG+TGG + chr4_2:69923675-69923694 Msa0618950:intron 40.0%
AAAGTGCACAATTACAGTGC+AGG - chr4_2:69923753-69923772 None:intergenic 40.0%
! GCACTGTAATTGTGCACTTT+TGG + chr4_2:69923753-69923772 Msa0618950:intron 40.0%
AGGGATGAAAGGGATAACTT+TGG - chr4_2:69923874-69923893 None:intergenic 40.0%
! TTTAGAGCTGTCAAACTCTC+TGG + chr4_2:69923985-69924004 Msa0618950:intron 40.0%
TGGTCATCCTTCCTAACATT+TGG + chr4_2:69924011-69924030 Msa0618950:intron 40.0%
ACAAAACTCCTGTCATGACA+AGG + chr4_2:69924238-69924257 Msa0618950:intron 40.0%
TTCCTAAACCTTGTCATGAC+AGG - chr4_2:69924249-69924268 None:intergenic 40.0%
GTCATGACAAGGTTTAGGAA+AGG + chr4_2:69924249-69924268 Msa0618950:intron 40.0%
TCCCCATAGCTTTCTAAACT+TGG + chr4_2:69924486-69924505 Msa0618950:intron 40.0%
CCCAAGTTTAGAAAGCTATG+GGG - chr4_2:69924490-69924509 None:intergenic 40.0%
CCCCATAGCTTTCTAAACTT+GGG + chr4_2:69924487-69924506 Msa0618950:intron 40.0%
TGAAATTTGCCGCTGCTATA+AGG + chr4_2:69924703-69924722 Msa0618950:CDS 40.0%
CCTACCGGAATAAAATCAGT+AGG - chr4_2:69924761-69924780 None:intergenic 40.0%
!!! CCTACTGATTTTATTCCGGT+AGG + chr4_2:69924758-69924777 Msa0618950:intron 40.0%
TCTTGCATATACAGATCCTG+AGG + chr4_2:69924878-69924897 Msa0618950:intron 40.0%
! AGCACCAACATATTTTCCTC+AGG - chr4_2:69924897-69924916 None:intergenic 40.0%
! GAGGAAAATATGTTGGTGCT+TGG + chr4_2:69924897-69924916 Msa0618950:CDS 40.0%
TAGATTTCTATCCTCCAAGG+TGG - chr4_2:69924965-69924984 None:intergenic 40.0%
AACAGGTACAACCAATGACA+AGG - chr4_2:69925072-69925091 None:intergenic 40.0%
GAACGAGTTTGACAATGAGA+TGG + chr4_2:69925170-69925189 Msa0618950:CDS 40.0%
TACTAGCATTACACACCTCT+AGG - chr4_2:69925440-69925459 None:intergenic 40.0%
GAGGTGTGTAATGCTAGTAA+TGG + chr4_2:69925441-69925460 Msa0618950:intron 40.0%
CTTGGAAAGTGAATGTGGTA+GGG + chr4_2:69925531-69925550 Msa0618950:intron 40.0%
TTGGAAAGTGAATGTGGTAG+GGG + chr4_2:69925532-69925551 Msa0618950:intron 40.0%
!! TGAGAAGCATCTGTCTGATA+TGG + chr4_2:69925638-69925657 Msa0618950:CDS 40.0%
GTCTGATATGGTTGTTACCA+AGG + chr4_2:69925650-69925669 Msa0618950:CDS 40.0%
TGCAAAGATTGACAGACCAA+TGG + chr4_2:69925680-69925699 Msa0618950:CDS 40.0%
GCAAAGATTGACAGACCAAT+GGG + chr4_2:69925681-69925700 Msa0618950:CDS 40.0%
TGGAAACAGACTATTCCCAT+TGG - chr4_2:69925699-69925718 None:intergenic 40.0%
AGTCTGTTTCCAAACAGCAA+AGG + chr4_2:69925707-69925726 Msa0618950:CDS 40.0%
!! CATTGCTATCCTTTGCTGTT+TGG - chr4_2:69925719-69925738 None:intergenic 40.0%
GAGCTGTCATCAAATACACA+AGG + chr4_2:69925794-69925813 Msa0618950:CDS 40.0%
!! GCAGCTTTGAAGGTTTAAGA+AGG + chr4_2:69925834-69925853 Msa0618950:intron 40.0%
TTGAGAAAGGAGCCGATATA+TGG - chr4_2:69925865-69925884 None:intergenic 40.0%
TGCCTCCTCAATATGTGATA+TGG + chr4_2:69926027-69926046 Msa0618950:CDS 40.0%
GTCCATATCACATATTGAGG+AGG - chr4_2:69926032-69926051 None:intergenic 40.0%
! TATGGACTGAAGTTGCCTTA+TGG + chr4_2:69926045-69926064 Msa0618950:CDS 40.0%
! ATGGACTGAAGTTGCCTTAT+GGG + chr4_2:69926046-69926065 Msa0618950:CDS 40.0%
TGAAATGTTGCTCACTGTGT+TGG + chr4_2:69926079-69926098 Msa0618950:CDS 40.0%
ATAATGGCCTGAACGCATAA+TGG - chr4_2:69926139-69926158 None:intergenic 40.0%
TATCTACCCTGAACGCATAA+TGG - chr4_2:69926155-69926174 None:intergenic 40.0%
TTACCGGACAAGATCCTAAA+CGG + chr4_2:69926267-69926286 Msa0618950:three_prime_UTR 40.0%
! ACGGTCTTGTATGTAGTTAG+TGG + chr4_2:69926286-69926305 Msa0618950:three_prime_UTR 40.0%
TTTATTGTGCAAGTGCAGCT+TGG + chr4_2:69926385-69926404 Msa0618950:three_prime_UTR 40.0%
ATCACAGGCTGTAACAGCTA+TGG + chr4_2:69922143-69922162 Msa0618950:intron 45.0%
TGTAACAGCTATGGTACAGC+AGG + chr4_2:69922152-69922171 Msa0618950:CDS 45.0%
TGAGATTGAGAGAGCTAGGT+TGG + chr4_2:69922378-69922397 Msa0618950:CDS 45.0%
CCCCTGTTCTTCCTTAATCT+TGG - chr4_2:69922416-69922435 None:intergenic 45.0%
!! GGTGGAAACTTTTGGTGCAA+TGG + chr4_2:69922590-69922609 Msa0618950:intron 45.0%
TTTGTGCACGGACATAATCC+TGG - chr4_2:69922775-69922794 None:intergenic 45.0%
AGTAGAGACGGAATATCTGC+AGG - chr4_2:69922893-69922912 None:intergenic 45.0%
TGCAGATATTCCGTCTCTAC+TGG + chr4_2:69922892-69922911 Msa0618950:CDS 45.0%
TGGTTCCAAAGACGAAAGTG+CGG + chr4_2:69923444-69923463 Msa0618950:intron 45.0%
! CGGATTGGAGTACATGTTTG+TGG + chr4_2:69923464-69923483 Msa0618950:intron 45.0%
GCTGTCAAACTCTCTGGTTA+TGG + chr4_2:69923991-69924010 Msa0618950:intron 45.0%
ATTATGTGTGAAGGGCAACC+AGG + chr4_2:69924211-69924230 Msa0618950:intron 45.0%
CTCCTGTCATGACAAGGTTT+AGG + chr4_2:69924244-69924263 Msa0618950:intron 45.0%
TGGTCACAGTGGAGTATATG+TGG + chr4_2:69924455-69924474 Msa0618950:intron 45.0%
CGATTTCACAGTCAGTGAAG+TGG - chr4_2:69924527-69924546 None:intergenic 45.0%
TGTACCTGTTACACGTGTCT+AGG + chr4_2:69925082-69925101 Msa0618950:intron 45.0%
!!! TAGGCTACTTTTGAAGCAGC+TGG + chr4_2:69925101-69925120 Msa0618950:intron 45.0%
TCACCATGGAAGTCATCCAA+TGG + chr4_2:69925124-69925143 Msa0618950:CDS 45.0%
TGTCCATTGGATGACTTCCA+TGG - chr4_2:69925130-69925149 None:intergenic 45.0%
TCATCCAATGGACAGCTCTT+TGG + chr4_2:69925136-69925155 Msa0618950:CDS 45.0%
CATCCAATGGACAGCTCTTT+GGG + chr4_2:69925137-69925156 Msa0618950:CDS 45.0%
TTTGACAATGAGATGGCCTC+TGG + chr4_2:69925177-69925196 Msa0618950:CDS 45.0%
CCTACCACATTCACTTTCCA+AGG - chr4_2:69925533-69925552 None:intergenic 45.0%
CCTTGGAAAGTGAATGTGGT+AGG + chr4_2:69925530-69925549 Msa0618950:intron 45.0%
TGAATGTGGTAGGGGAATTG+TGG + chr4_2:69925540-69925559 Msa0618950:intron 45.0%
TATGGTTGTTACCAAGGCTC+TGG + chr4_2:69925656-69925675 Msa0618950:CDS 45.0%
AATCTTTGCAACCAGAGCCT+TGG - chr4_2:69925670-69925689 None:intergenic 45.0%
TAACTCATGGGCAGCAAACT+TGG + chr4_2:69925746-69925765 Msa0618950:CDS 45.0%
GGAGAAACTGCTTGATCTTG+TGG + chr4_2:69925767-69925786 Msa0618950:CDS 45.0%
! CAAAGCTGCTTTATGGACCA+TGG - chr4_2:69925823-69925842 None:intergenic 45.0%
! GGTCCATAAAGCAGCTTTGA+AGG + chr4_2:69925824-69925843 Msa0618950:CDS 45.0%
TGGACTGAAGTTGCCTTATG+GGG + chr4_2:69926047-69926066 Msa0618950:CDS 45.0%
TTCAGGCCATTATGCGTTCA+GGG + chr4_2:69926146-69926165 Msa0618950:CDS 45.0%
!! ATACCTTACCACCGACTTAC+CGG + chr4_2:69926251-69926270 Msa0618950:three_prime_UTR 45.0%
TAGGATCTTGTCCGGTAAGT+CGG - chr4_2:69926265-69926284 None:intergenic 45.0%
! AGACCGTTTAGGATCTTGTC+CGG - chr4_2:69926273-69926292 None:intergenic 45.0%
GAGAAACAAATGCGTCTCGC+CGG + chr4_2:69921324-69921343 Msa0618950:CDS 50.0%
!! TCTAGTGCCGACTATTTCGC+CGG - chr4_2:69921346-69921365 None:intergenic 50.0%
GAACAGTGTATCTGCTGGGA+AGG + chr4_2:69922236-69922255 Msa0618950:CDS 50.0%
AGAACAGGGGCTTATAGCTG+AGG + chr4_2:69922426-69922445 Msa0618950:CDS 50.0%
CCAATCCGCACTTTCGTCTT+TGG - chr4_2:69923452-69923471 None:intergenic 50.0%
! CCAAAGACGAAAGTGCGGAT+TGG + chr4_2:69923449-69923468 Msa0618950:intron 50.0%
GTAGCCTAGACACGTGTAAC+AGG - chr4_2:69925089-69925108 None:intergenic 50.0%
! TTTGAAGCAGCTGGTCACCA+TGG + chr4_2:69925110-69925129 Msa0618950:CDS 50.0%
TCTCCCAAAGAGCTGTCCAT+TGG - chr4_2:69925143-69925162 None:intergenic 50.0%
! GCTTTTGTGTCTCAGCCTAG+AGG + chr4_2:69925422-69925441 Msa0618950:CDS 50.0%
! TGTTGCTCACTGTGTTGGTG+AGG + chr4_2:69926084-69926103 Msa0618950:CDS 50.0%
GTTCAGGCCATTATGCGTTC+AGG + chr4_2:69926145-69926164 Msa0618950:CDS 50.0%
GGACATAATCCTGGCGGTCT+AGG - chr4_2:69922766-69922785 None:intergenic 55.0%
GTGCACGGACATAATCCTGG+CGG - chr4_2:69922772-69922791 None:intergenic 55.0%
GCAGTCGGACAGACAGTCAT+TGG - chr4_2:69923241-69923260 None:intergenic 55.0%
!! GACAGGAGTTTTGTAGCGCC+TGG - chr4_2:69924232-69924251 None:intergenic 55.0%
! CTGGACTGCATCGGTGAATG+TGG - chr4_2:69924931-69924950 None:intergenic 55.0%
TGTCCGGTAAGTCGGTGGTA+AGG - chr4_2:69926257-69926276 None:intergenic 55.0%
GATCTTGTCCGGTAAGTCGG+TGG - chr4_2:69926262-69926281 None:intergenic 55.0%
CGTCTCGCCGGCGAAATAGT+CGG + chr4_2:69921336-69921355 Msa0618950:CDS 60.0%
TCGATTGTGCCTAGACCGCC+AGG + chr4_2:69922754-69922773 Msa0618950:CDS 60.0%
ACGACGCGGTCAGCTCAAGC+AGG + chr4_2:69921449-69921468 Msa0618950:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 69921162 69926492 69921162 ID=Msa0618950;Name=Msa0618950
chr4_2 mRNA 69921162 69926492 69921162 ID=Msa0618950-mRNA-1;Parent=Msa0618950;Name=Msa0618950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.81|0.83|1|1|1|12|269|514
chr4_2 exon 69921162 69921191 69921162 ID=Msa0618950-mRNA-1:exon:20289;Parent=Msa0618950-mRNA-1
chr4_2 exon 69921276 69921470 69921276 ID=Msa0618950-mRNA-1:exon:20290;Parent=Msa0618950-mRNA-1
chr4_2 exon 69922150 69922257 69922150 ID=Msa0618950-mRNA-1:exon:20291;Parent=Msa0618950-mRNA-1
chr4_2 exon 69922370 69922474 69922370 ID=Msa0618950-mRNA-1:exon:20292;Parent=Msa0618950-mRNA-1
chr4_2 exon 69922591 69922647 69922591 ID=Msa0618950-mRNA-1:exon:20293;Parent=Msa0618950-mRNA-1
chr4_2 exon 69922752 69922948 69922752 ID=Msa0618950-mRNA-1:exon:20294;Parent=Msa0618950-mRNA-1
chr4_2 exon 69924676 69924775 69924676 ID=Msa0618950-mRNA-1:exon:20295;Parent=Msa0618950-mRNA-1
chr4_2 exon 69924892 69925004 69924892 ID=Msa0618950-mRNA-1:exon:20296;Parent=Msa0618950-mRNA-1
chr4_2 exon 69925104 69925254 69925104 ID=Msa0618950-mRNA-1:exon:20297;Parent=Msa0618950-mRNA-1
chr4_2 exon 69925366 69925443 69925366 ID=Msa0618950-mRNA-1:exon:20298;Parent=Msa0618950-mRNA-1
chr4_2 exon 69925633 69925845 69925633 ID=Msa0618950-mRNA-1:exon:20299;Parent=Msa0618950-mRNA-1
chr4_2 exon 69926026 69926492 69926026 ID=Msa0618950-mRNA-1:exon:20300;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69921162 69921191 69921162 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69921276 69921470 69921276 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69922150 69922257 69922150 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69922370 69922474 69922370 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69922591 69922647 69922591 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69922752 69922948 69922752 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69924676 69924775 69924676 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69924892 69925004 69924892 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69925104 69925254 69925104 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69925366 69925443 69925366 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69925633 69925845 69925633 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 CDS 69926026 69926223 69926026 ID=Msa0618950-mRNA-1:cds;Parent=Msa0618950-mRNA-1
chr4_2 three_prime_UTR 69926224 69926492 69926224 ID=Msa0618950-mRNA-1:three_prime_utr;Parent=Msa0618950-mRNA-1
Gene Sequence

>Msa0618950

ATGGTAATCTTCGATCGATTCTCTTTCATGGCAAACATGGAGAATCTTGATGCGAAGATAGAACAATTGCTCAACGTCGAGAAACAAATGCGTCTCGCCGGCGAAATAGTCGGCACTAGAAAAGCTGCAATCGACATCTTGCAACTCTGTTTTGAAGCCAAAGCATGGAAAACCCTAAATGATCAGATCGTTGTTTTGTCTAAACGACGCGGTCAGCTCAAGCAGGCTGTAACAGCTATGGTACAGCAGGCTATGCAATATATTGACGAGACACCGGATATTGAAACTCGTATTGAACTTATCAAAACATTGAACAGTGTATCTGCTGGGAAGATATATGTTGAGATTGAGAGAGCTAGGTTGGTCAAGAAACTTGCCAAGATTAAGGAAGAACAGGGGCTTATAGCTGAGGCCGCTGATTTGATGCAAGAAATTGCGGTGGAAACTTTTGGTGCAATGGCAAAAACTGAGAAAATTGCATTCATTCTCGAACAAGTTCGATTGTGCCTAGACCGCCAGGATTATGTCCGTGCACAAATACTCTCAAGAAAGATAAGTCCAAGAGTATTCGACATAGATGCATCTAAGGAAAAGAAAAAGCCCAAAGAAGGTGATAATATGGTCGAAGAGGCTCCTGCAGATATTCCGTCTCTACTGGAGTTGAAACAGATTTATTACGAGCTAATGATTAGGTATTATTCCCACAACAATGATTATCTTGAAATTTGCCGCTGCTATAAGGCAATATATGAGATTCCGTCCATCAAAGAAAATCCTACTGATTTTATTCCGATCCTGAGGAAAATATGTTGGTGCTTGGTTCTAGCACCACATTCACCGATGCAGTCCAGTCTTTTAAATTCCACCTTGGAGGATAGAAATCTATCTGAGATTCCAAACTTCCAGCTACTTTTGAAGCAGCTGGTCACCATGGAAGTCATCCAATGGACAGCTCTTTGGGAGACATATAAGAACGAGTTTGACAATGAGATGGCCTCTGGAAAGTTTTTGAGTGAAAAAGCAGCTGAAGATCTGAAACAGAGAATTATTGAACATAACATTCTTGTTGTATCAAAATACTATGCAAGGATTACTTTGAAGAGACTTGCACAGCTTTTGTGTCTCAGCCTAGAGGAAGCTGAGAAGCATCTGTCTGATATGGTTGTTACCAAGGCTCTGGTTGCAAAGATTGACAGACCAATGGGAATAGTCTGTTTCCAAACAGCAAAGGATAGCAATGATGTACTTAACTCATGGGCAGCAAACTTGGAGAAACTGCTTGATCTTGTGGAGAAGAGCTGTCATCAAATACACAAGGAAACCATGGTCCATAAAGCAGCTTTGAAGGTGCCTCCTCAATATGTGATATGGACTGAAGTTGCCTTATGGGGATTCTCATTTGAAATGTTGCTCACTGTGTTGGTGAGGAATAACAATTGTCTCAAATTTATATTTTGCCATTATGCGTTCAGGCCATTATGCGTTCAGGGTAGATATGATATGATTCTTAGTACTGAAAGTAGCTTTGTTGTATACTACTTTTAA

Protein sequence

>Msa0618950

MVIFDRFSFMANMENLDAKIEQLLNVEKQMRLAGEIVGTRKAAIDILQLCFEAKAWKTLNDQIVVLSKRRGQLKQAVTAMVQQAMQYIDETPDIETRIELIKTLNSVSAGKIYVEIERARLVKKLAKIKEEQGLIAEAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDIDASKEKKKPKEGDNMVEEAPADIPSLLELKQIYYELMIRYYSHNNDYLEICRCYKAIYEIPSIKENPTDFIPILRKICWCLVLAPHSPMQSSLLNSTLEDRNLSEIPNFQLLLKQLVTMEVIQWTALWETYKNEFDNEMASGKFLSEKAAEDLKQRIIEHNILVVSKYYARITLKRLAQLLCLSLEEAEKHLSDMVVTKALVAKIDRPMGIVCFQTAKDSNDVLNSWAANLEKLLDLVEKSCHQIHKETMVHKAALKVPPQYVIWTEVALWGFSFEMLLTVLVRNNNCLKFIFCHYAFRPLCVQGRYDMILSTESSFVVYYF*