AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1009660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1009660 MtrunA17_Chr7g0220231 98.395 623 7 2 165 785 1 622 0.0 1246
Msa1009660 MtrunA17_Chr7g0220231 97.315 149 3 1 1 149 1 148 9.37e-90 300
Msa1009660 MtrunA17_Chr7g0220231 86.364 44 6 0 790 833 731 774 3.58e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1009660 AT5G38880.1 69.207 643 171 5 168 786 6 645 0.0 887
Msa1009660 AT5G38880.1 62.130 169 39 3 4 149 6 172 2.70e-55 205
Msa1009660 AT5G38880.1 79.070 43 9 0 790 832 752 794 1.97e-15 81.3

Find 279 sgRNAs with CRISPR-Local

Find 787 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTACAGTATCCACTTTA+TGG 0.131855 7_1:+11469079 Msa1009660:CDS
GTTAGTTATGTTATGTTTAA+TGG 0.182783 7_1:-11463464 None:intergenic
ATCTCGGCTTAGTCGCTTCT+TGG 0.189413 7_1:+11463494 Msa1009660:five_prime_UTR
TTATAATTGCATGTGATTAA+TGG 0.195586 7_1:+11474020 Msa1009660:three_prime_UTR
TATAGTAACAGAGACGTTTA+TGG 0.205757 7_1:-11468221 None:intergenic
GAGAAAATTTAAGTCACTTT+AGG 0.247784 7_1:-11473703 None:intergenic
CCTCATTAGTGGCTCGTTAT+TGG 0.249392 7_1:+11463537 Msa1009660:five_prime_UTR
TGCAGGATGCTGCTTCATTT+TGG 0.252455 7_1:+11471217 Msa1009660:intron
TATAAGCCATTTCAGATTCT+AGG 0.257951 7_1:+11473978 Msa1009660:three_prime_UTR
CAGTAATTGCCTGAAGTAAT+AGG 0.266699 7_1:-11468593 None:intergenic
AAGAGAAGTTGCTGGTTTAA+AGG 0.281025 7_1:+11470717 Msa1009660:CDS
GAAGAGAGAAGGGGAGGAAG+TGG 0.281721 7_1:+11463908 Msa1009660:CDS
GAAGAGAGAAGGGGAGGAAG+TGG 0.281721 7_1:+11466299 Msa1009660:CDS
TTGATGAACGGGCGAATTAC+AGG 0.306303 7_1:+11464066 Msa1009660:CDS
TTGATGAACGGGCGAATTAC+AGG 0.306303 7_1:+11466457 Msa1009660:CDS
GTACTTCAAGCATTTACTTT+GGG 0.317718 7_1:+11473793 Msa1009660:three_prime_UTR
TGGGAATTGTTTAGACAATC+TGG 0.322749 7_1:-11473731 None:intergenic
AGCTGTTTATTCTACTGTTA+AGG 0.323612 7_1:+11468329 Msa1009660:CDS
CATGTATTCAGCTAGATGTT+TGG 0.326608 7_1:+11470686 Msa1009660:intron
GGAAGTGGAGGTTGCGTTGA+TGG 0.329516 7_1:+11463923 Msa1009660:CDS
GGAAGTGGAGGTTGCGTTGA+TGG 0.329516 7_1:+11466314 Msa1009660:CDS
ATGTATTCAGCTAGATGTTT+GGG 0.331353 7_1:+11470687 Msa1009660:intron
CTCCGGCGCCGGCGGCGTAT+TGG 0.335674 7_1:-11463716 None:intergenic
CTCCGGCGCCGGCGGCGTAT+TGG 0.335674 7_1:-11466107 None:intergenic
AAATAGAGAAAATTGATGTT+AGG 0.340794 7_1:+11468652 Msa1009660:CDS
CACGGTGAAGGGGATGGTGG+TGG 0.347298 7_1:+11463873 Msa1009660:CDS
CACGGTGAAGGGGATGGTGG+TGG 0.347298 7_1:+11466264 Msa1009660:CDS
CTTTATGGAAATGGAAAACT+TGG 0.352170 7_1:+11469094 Msa1009660:CDS
CAGTATCCACTTTATGGAAA+TGG 0.356840 7_1:+11469085 Msa1009660:CDS
TGGAAGTCTTAGACAACTTC+AGG 0.363351 7_1:+11469391 Msa1009660:CDS
TGTTCCCACGGCAGATCTTT+CGG 0.367012 7_1:-11463770 None:intergenic
TAAGGAGGGGTTATTCTCTA+TGG 0.369187 7_1:-11463390 None:intergenic
TTTAAGAAGTGCGGTGTATA+TGG 0.370811 7_1:-11470875 None:intergenic
AGTAATTGCCTGAAGTAATA+GGG 0.377154 7_1:-11468592 None:intergenic
CGGCATCGACGGTTGTCGAC+TGG 0.377291 7_1:+11473577 Msa1009660:CDS
CGAATGGCTTCACAAAGAAA+TGG 0.379940 7_1:+11463677 Msa1009660:CDS
CGAATGGCTTCACAAAGAAA+TGG 0.379940 7_1:+11466068 Msa1009660:CDS
GGAAGAAGGAGAAGAGAGAA+GGG 0.385063 7_1:+11463898 Msa1009660:CDS
GGAAGAAGGAGAAGAGAGAA+GGG 0.385063 7_1:+11466289 Msa1009660:CDS
GCTGTTTATTCTACTGTTAA+GGG 0.389280 7_1:+11468330 Msa1009660:CDS
GATGTTACTTCTCGTTCAAT+TGG 0.390994 7_1:+11469350 Msa1009660:CDS
TCAAGCAGAAGCAGCGAAGC+TGG 0.397262 7_1:+11468500 Msa1009660:CDS
GGCTTAGTCGCTTCTTGGAC+CGG 0.403530 7_1:+11463499 Msa1009660:five_prime_UTR
GGAGAGGGATGCGGTGAAGA+AGG 0.403566 7_1:+11463944 Msa1009660:CDS
GGAGAGGGATGCGGTGAAGA+AGG 0.403566 7_1:+11466335 Msa1009660:CDS
GAAGAGGATGCTTGATGAAC+GGG 0.405836 7_1:+11464055 Msa1009660:CDS
GAAGAGGATGCTTGATGAAC+GGG 0.405836 7_1:+11466446 Msa1009660:CDS
AGAAGGAGGTTGAGAGGTTG+AGG 0.408148 7_1:+11466352 Msa1009660:CDS
CGTGGATTCTTCCGTTGAAA+TGG 0.408715 7_1:+11468275 Msa1009660:CDS
ACATTAAGAAGTCTAGTTAC+AGG 0.412044 7_1:+11474176 Msa1009660:three_prime_UTR
GAGTCCTCCCCTATTACTTC+AGG 0.412492 7_1:+11468584 Msa1009660:CDS
TTAATGGTTGGATCTGATAC+TGG 0.414055 7_1:-11463448 None:intergenic
AGTACTTCAAGCATTTACTT+TGG 0.414758 7_1:+11473792 Msa1009660:three_prime_UTR
GTAATAGGGGAGGACTCTTT+AGG 0.420923 7_1:-11468578 None:intergenic
TGATGAGTGGTGGGAGCAAC+CGG 0.422273 7_1:+11473557 Msa1009660:CDS
CTGCCGTGGGAACATGATTC+CGG 0.423922 7_1:+11466170 Msa1009660:CDS
AGCATGTAGAGGCTATTATC+TGG 0.424373 7_1:-11471369 None:intergenic
CTGCCGTGGGAACATGATTC+CGG 0.426587 7_1:+11463779 Msa1009660:CDS
CAGGCACTGCTTGAGGCCAT+CGG 0.427432 7_1:+11472286 Msa1009660:intron
ATCGGGTCCAGTGGATCATC+TGG 0.429603 7_1:+11472304 Msa1009660:CDS
GCTGAGACCCGACATATTGA+TGG 0.433205 7_1:-11472406 None:intergenic
TTATAAGCTATACGAGAAAC+AGG 0.433620 7_1:+11473949 Msa1009660:three_prime_UTR
TGCGCACTGGTTTGAACTGT+TGG 0.434165 7_1:+11474130 Msa1009660:three_prime_UTR
CACTAATGAGGCTCTGTATC+CGG 0.436841 7_1:-11463525 None:intergenic
GGCCAATACGCCGCCGGCGC+CGG 0.438971 7_1:+11463714 Msa1009660:CDS
GGCCAATACGCCGCCGGCGC+CGG 0.438971 7_1:+11466105 Msa1009660:CDS
TCGCTTCTTGGACCGGATAC+CGG 0.439475 7_1:+11463506 Msa1009660:five_prime_UTR
CGCACTTCTTAAAGCAAATA+CGG 0.440398 7_1:+11470885 Msa1009660:CDS
GGATGGTGGTGGGAGGAAGA+AGG 0.444216 7_1:+11463884 Msa1009660:CDS
GGATGGTGGTGGGAGGAAGA+AGG 0.444216 7_1:+11466275 Msa1009660:CDS
AGGTTTCTTTCTTGTTCTTG+AGG 0.447405 7_1:-11473858 None:intergenic
AATAGAGAAAATTGATGTTA+GGG 0.451389 7_1:+11468653 Msa1009660:CDS
ATATGAAAATAACATAGTTA+TGG 0.453264 7_1:+11469030 Msa1009660:CDS
TTACCACCTAGAATCTGAAA+TGG 0.454128 7_1:-11473984 None:intergenic
AGGAAGAAGGAGAAGAGAGA+AGG 0.454517 7_1:+11463897 Msa1009660:CDS
AGGAAGAAGGAGAAGAGAGA+AGG 0.454517 7_1:+11466288 Msa1009660:CDS
AGCTTCGCTGCTTCTGCTTG+AGG 0.455594 7_1:-11468498 None:intergenic
AGCCGCACTTATTTCTGCAT+TGG 0.459417 7_1:-11472341 None:intergenic
AAGTTTAACTCTAATGAGTA+AGG 0.461104 7_1:-11463408 None:intergenic
TGATGGGCAGATTCCGGATG+AGG 0.464339 7_1:+11468533 Msa1009660:CDS
AGAAGGAGGTTGATAGATTG+AGG 0.466106 7_1:+11463961 Msa1009660:CDS
CTTGGGGCTGATGTGCCTCC+AGG 0.466724 7_1:+11469112 Msa1009660:CDS
GGGAAGAAGCGGAGAGGAAG+AGG 0.466854 7_1:+11464039 Msa1009660:CDS
GGGAAGAAGCGGAGAGGAAG+AGG 0.466854 7_1:+11466430 Msa1009660:CDS
CATGCTTCCTTCTTCACCAC+AGG 0.472095 7_1:+11471386 Msa1009660:CDS
TTCTGCAGCTTGATGAGTGG+TGG 0.472825 7_1:+11473547 Msa1009660:intron
ATAACTGTTCTAACCTCATC+CGG 0.473562 7_1:-11468546 None:intergenic
GAATAAAGACCTGTCTTTCA+AGG 0.474678 7_1:-11469153 None:intergenic
CGAGAATGCTTGAAGTTTCG+AGG 0.475587 7_1:+11466409 Msa1009660:CDS
GACAGCAAGAGCCGGTGCTC+GGG 0.476775 7_1:+11472369 Msa1009660:CDS
GTTATGTTATGTTTAATGGT+TGG 0.477982 7_1:-11463460 None:intergenic
GTCGACTGGGTGACAGTGGA+TGG 0.478572 7_1:+11473591 Msa1009660:CDS
AAATCAGCTCCTTGAAAGAC+AGG 0.479838 7_1:+11469144 Msa1009660:CDS
TGACAGCAAGAGCCGGTGCT+CGG 0.480202 7_1:+11472368 Msa1009660:CDS
CAACTTCATTTATTGCGCAC+TGG 0.480639 7_1:+11474117 Msa1009660:three_prime_UTR
GAAGGAGAAGAGAGAAGGGG+AGG 0.480900 7_1:+11463902 Msa1009660:CDS
GAAGGAGAAGAGAGAAGGGG+AGG 0.480900 7_1:+11466293 Msa1009660:CDS
TTGCGAATCGATTCGACTGA+CGG 0.481305 7_1:-11466144 None:intergenic
TTCATCACATTGGCGGTCAT+AGG 0.482889 7_1:-11468175 None:intergenic
AGGCACTGCTTGAGGCCATC+GGG 0.484747 7_1:+11472287 Msa1009660:intron
CAAGCAGAAGCAGCGAAGCT+GGG 0.485794 7_1:+11468501 Msa1009660:CDS
GAGGCTCTGTATCCGGTATC+CGG 0.486243 7_1:-11463518 None:intergenic
ATCTTCGGCTTCTTTCCTCT+CGG 0.489665 7_1:-11470791 None:intergenic
TTCAAGCATTTACTTTGGGA+TGG 0.490306 7_1:+11473797 Msa1009660:three_prime_UTR
GCAAAGGAAAGAGAAGTTGC+TGG 0.490620 7_1:+11470709 Msa1009660:CDS
GTGAAGGGGATGGTGGTGGG+AGG 0.491173 7_1:+11463877 Msa1009660:CDS
GTGAAGGGGATGGTGGTGGG+AGG 0.491173 7_1:+11466268 Msa1009660:CDS
GAGAGAAGGGGAGGAAGTGG+AGG 0.492293 7_1:+11463911 Msa1009660:CDS
GAGAGAAGGGGAGGAAGTGG+AGG 0.492293 7_1:+11466302 Msa1009660:CDS
GCAAGGGATGCTCAAAGATC+AGG 0.494346 7_1:+11468252 Msa1009660:CDS
GCTTCTAACATGTTATGATC+AGG 0.495135 7_1:+11473650 Msa1009660:CDS
CGAGGATGCTTGAGGTTTCG+AGG 0.496782 7_1:+11464018 Msa1009660:CDS
GGCAATTCCATCAATATGTC+GGG 0.498007 7_1:+11472399 Msa1009660:CDS
ACGCCACTTCCTTCGTAAGC+AGG 0.500417 7_1:-11468465 None:intergenic
GAATGTGAGGAGGAATATTA+CGG 0.500989 7_1:+11463848 Msa1009660:CDS
AAATGTGAGGAGGAATATTA+CGG 0.500989 7_1:+11466239 Msa1009660:CDS
CAATACGCCGCCGGCGCCGG+AGG 0.501014 7_1:+11463717 Msa1009660:CDS
CAATACGCCGCCGGCGCCGG+AGG 0.501014 7_1:+11466108 Msa1009660:CDS
GGCATCGACGGTTGTCGACT+GGG 0.501409 7_1:+11473578 Msa1009660:CDS
GAATGGCTTCACAAAGAAAT+GGG 0.502140 7_1:+11463678 Msa1009660:CDS
GAATGGCTTCACAAAGAAAT+GGG 0.502140 7_1:+11466069 Msa1009660:CDS
GCTGCACTTCAGTATGCTGC+TGG 0.502447 7_1:+11472427 Msa1009660:CDS
CTTTGTCTTGTGTTGAGTAG+AGG 0.504792 7_1:-11463318 None:intergenic
CGGATACAGAGCCTCATTAG+TGG 0.507556 7_1:+11463526 Msa1009660:five_prime_UTR
TTATAAACCTGTGGTGAAGA+AGG 0.508261 7_1:-11471393 None:intergenic
TCGAGTATCGCTTCCGGTGA+CGG 0.509073 7_1:-11466048 None:intergenic
CCCACGGCAGATCTTTCGGA+TGG 0.511773 7_1:-11463766 None:intergenic
TGTTGTGAGGAGACAGAGGA+AGG 0.512237 7_1:+11463986 Msa1009660:CDS
TGTTGTGAGGAGACAGAGGA+AGG 0.512237 7_1:+11466377 Msa1009660:CDS
ATATTACGGTTCACGGTGAA+GGG 0.512455 7_1:+11463862 Msa1009660:CDS
ATATTACGGTTCACGGTGAA+GGG 0.512455 7_1:+11466253 Msa1009660:CDS
CAGGCATAAGCAAGTGATGT+TGG 0.512719 7_1:+11468149 Msa1009660:intron
TTTCCTGCTTACGAAGGAAG+TGG 0.514296 7_1:+11468462 Msa1009660:CDS
TCTGCAGCTTGATGAGTGGT+GGG 0.516666 7_1:+11473548 Msa1009660:intron
ATCTTTCTGATGTGATGATC+CGG 0.516949 7_1:-11463363 None:intergenic
AGCCATTCGAGTATCGCTTC+CGG 0.518680 7_1:-11463663 None:intergenic
AGCCATTCGAGTATCGCTTC+CGG 0.518680 7_1:-11466054 None:intergenic
AATATTACGGTTCACGGTGA+AGG 0.519453 7_1:+11463861 Msa1009660:CDS
AATATTACGGTTCACGGTGA+AGG 0.519453 7_1:+11466252 Msa1009660:CDS
TGCCGACGGATCCCGAGCAC+CGG 0.519503 7_1:-11472380 None:intergenic
GGAATGTTGTGAGGAGACAG+AGG 0.522586 7_1:+11463982 Msa1009660:CDS
GGAATGTTGTGAGGAGACAG+AGG 0.522586 7_1:+11466373 Msa1009660:CDS
TCGAGTATCGCTTCCGGTGA+CGG 0.526000 7_1:-11463657 None:intergenic
ACAATCTTCATCGCCGTCAC+CGG 0.528251 7_1:+11466035 Msa1009660:CDS
TCGAAGCTTCATCACATTGG+CGG 0.529322 7_1:-11468182 None:intergenic
CACACTTCTGAAGAGAAAGA+AGG 0.534065 7_1:-11473912 None:intergenic
TTAACTCTAATGAGTAAGGA+GGG 0.534928 7_1:-11463404 None:intergenic
TTAGTGGCTCGTTATTGGAC+CGG 0.536665 7_1:+11463542 Msa1009660:five_prime_UTR
GTCCAGTGGATCATCTGGAC+AGG 0.537413 7_1:+11472309 Msa1009660:CDS
TGGAGGTTGCGTTGATGGAG+AGG 0.537697 7_1:+11463928 Msa1009660:CDS
TGGAGGTTGCGTTGATGGAG+AGG 0.537697 7_1:+11466319 Msa1009660:CDS
ACACTTCTGAAGAGAAAGAA+GGG 0.539150 7_1:-11473911 None:intergenic
TGAATCTCTTGTAGCTTACA+TGG 0.539346 7_1:+11468419 Msa1009660:CDS
AAAACTATTTACCATTTCAA+CGG 0.539456 7_1:-11468286 None:intergenic
CGGTGAAGAAGGAGGTTGAG+AGG 0.539715 7_1:+11466346 Msa1009660:CDS
TTTGTCTTGTGTTGAGTAGA+GGG 0.540267 7_1:-11463317 None:intergenic
ACACAACAACAAACAAACAC+CGG 0.540893 7_1:+11463344 Msa1009660:five_prime_UTR
GCGTTGTATTTCAGACATCA+AGG 0.541137 7_1:-11470752 None:intergenic
GAAGAAGGAGAAGAGAGAAG+GGG 0.541221 7_1:+11463899 Msa1009660:CDS
GAAGAAGGAGAAGAGAGAAG+GGG 0.541221 7_1:+11466290 Msa1009660:CDS
TTACAGAGCTTTACAATCAG+AGG 0.541754 7_1:-11474051 None:intergenic
ACAATCTTCATCTCCGTCAC+CGG 0.542301 7_1:+11463644 Msa1009660:CDS
GTCAGCAACCATCGACTGCA+AGG 0.542373 7_1:+11471241 Msa1009660:CDS
CAGTCGACAACCGTCGATGC+CGG 0.544298 7_1:-11473576 None:intergenic
TTCTCGAAGCTTCATCACAT+TGG 0.544752 7_1:-11468185 None:intergenic
GGGAATTGTTTAGACAATCT+GGG 0.546138 7_1:-11473730 None:intergenic
GTTACTATATAAATCAAGCA+AGG 0.546325 7_1:+11468235 Msa1009660:CDS
AGGAGGAATATTACGGTTCA+CGG 0.547542 7_1:+11463855 Msa1009660:CDS
AGGAGGAATATTACGGTTCA+CGG 0.547542 7_1:+11466246 Msa1009660:CDS
GAGGGATGCGGTGAAGAAGG+AGG 0.548565 7_1:+11463947 Msa1009660:CDS
GAGGGATGCGGTGAAGAAGG+AGG 0.548565 7_1:+11466338 Msa1009660:CDS
TTTCGGATGGATTCGACTGA+CGG 0.549546 7_1:-11463753 None:intergenic
ATAACTAACTAACTCGATCT+CGG 0.550371 7_1:+11463478 Msa1009660:five_prime_UTR
ACGGTGAAGGGGATGGTGGT+GGG 0.550521 7_1:+11463874 Msa1009660:CDS
ACGGTGAAGGGGATGGTGGT+GGG 0.550521 7_1:+11466265 Msa1009660:CDS
TCAGCTAGATGTTTGGGCAA+AGG 0.550594 7_1:+11470693 Msa1009660:intron
GTTGAGTAGAGGGAAATTGT+TGG 0.553007 7_1:-11463307 None:intergenic
GTGGGAGCAACCGGCATCGA+CGG 0.554649 7_1:+11473566 Msa1009660:CDS
TTCTTCTGCAGCTTGATGAG+TGG 0.555882 7_1:+11473544 Msa1009660:intron
TTCAATGTCGATAGCAAAGT+GGG 0.556811 7_1:-11473750 None:intergenic
TAAACAATGCTGCAGAAGCA+AGG 0.557173 7_1:+11469285 Msa1009660:CDS
TTCCTGTCCAGATGATCCAC+TGG 0.561115 7_1:-11472311 None:intergenic
TTTATGGAAATGGAAAACTT+GGG 0.564742 7_1:+11469095 Msa1009660:CDS
CGGCAATTCCATCAATATGT+CGG 0.564930 7_1:+11472398 Msa1009660:CDS
GCATACTCCCTTGCAGTCGA+TGG 0.568781 7_1:-11471249 None:intergenic
GCATACACTTCTCACTTGAA+AGG 0.568944 7_1:+11468615 Msa1009660:CDS
GGAGCCACGTCTCAAAATGT+TGG 0.569343 7_1:+11469371 Msa1009660:CDS
TCAACAACAGCAGAACATGC+TGG 0.570268 7_1:-11471288 None:intergenic
TATGGTTCAGGCACTGCTTG+AGG 0.570666 7_1:+11472279 Msa1009660:intron
GGGCTGATGCAGAGATCTTG+AGG 0.571072 7_1:+11468673 Msa1009660:CDS
AAACTTATGAAACGTCTGCA+TGG 0.572224 7_1:+11469320 Msa1009660:CDS
ACGGTTCACGGTGAAGGGGA+TGG 0.572577 7_1:+11463867 Msa1009660:CDS
ACGGTTCACGGTGAAGGGGA+TGG 0.572577 7_1:+11466258 Msa1009660:CDS
GAGGGAAAAGAATATTAGAA+AGG 0.573113 7_1:+11468392 Msa1009660:CDS
ATGGATGTTTCCTCTTCTGA+CGG 0.576205 7_1:+11469049 Msa1009660:CDS
TCCATCCGAAAGATCTGCCG+TGG 0.579092 7_1:+11463765 Msa1009660:CDS
CTTGAGGCCATCGGGTCCAG+TGG 0.580795 7_1:+11472295 Msa1009660:CDS
CGTATTTGCTTTAAGAAGTG+CGG 0.581014 7_1:-11470884 None:intergenic
TCGATTCGCAAAATCTGCCG+TGG 0.582821 7_1:+11466156 Msa1009660:CDS
TTTAACTCTAATGAGTAAGG+AGG 0.584325 7_1:-11463405 None:intergenic
GGAAGAGGATGCTTGATGAA+CGG 0.585097 7_1:+11464054 Msa1009660:CDS
GGAAGAGGATGCTTGATGAA+CGG 0.585097 7_1:+11466445 Msa1009660:CDS
AAACAATGCTGCAGAAGCAA+GGG 0.586745 7_1:+11469286 Msa1009660:CDS
GTGGGAACATGATTCCGGTA+TGG 0.586849 7_1:+11463784 Msa1009660:CDS
GTGGGAACATGATTCCGGTA+TGG 0.586849 7_1:+11466175 Msa1009660:CDS
GCGTGCGAAATCGGAGAAGA+CGG 0.587591 7_1:+11463821 Msa1009660:CDS
GCGTGCGAAATCGGAGAAGA+CGG 0.587591 7_1:+11466212 Msa1009660:CDS
AGGAGAGCTTCCGTCAGAAG+AGG 0.588703 7_1:-11469059 None:intergenic
CCATAAAGTGGATACTGTAG+AGG 0.590208 7_1:-11469079 None:intergenic
GAGTAGAGGGAAATTGTTGG+TGG 0.591591 7_1:-11463304 None:intergenic
TGCGTTGATGGAGAGGGATG+CGG 0.592147 7_1:+11463935 Msa1009660:CDS
TGCGTTGATGGAGAGGGATG+CGG 0.592147 7_1:+11466326 Msa1009660:CDS
AAGCAGAAGCAGCGAAGCTG+GGG 0.592988 7_1:+11468502 Msa1009660:CDS
CCAATAACGAGCCACTAATG+AGG 0.593136 7_1:-11463537 None:intergenic
GCATAAGCAAGTGATGTTGG+AGG 0.594477 7_1:+11468152 Msa1009660:CDS
AGACGGTGAGGAATGTGAGG+AGG 0.594639 7_1:+11463838 Msa1009660:CDS
CACCGGAAGCGATACTCGAA+TGG 0.595650 7_1:+11463661 Msa1009660:CDS
CACCGGAAGCGATACTCGAA+TGG 0.595650 7_1:+11466052 Msa1009660:CDS
TGAGGTTTCGAGGGAAGAAG+CGG 0.599710 7_1:+11464028 Msa1009660:CDS
TGAAGTTTCGAGGGAAGAAG+CGG 0.599710 7_1:+11466419 Msa1009660:CDS
GAGAATGCTTGAAGTTTCGA+GGG 0.602700 7_1:+11466410 Msa1009660:CDS
TTTGAAAGCGAGGATGCTTG+AGG 0.602758 7_1:+11464010 Msa1009660:CDS
TGAGACTTCAAATAGTGCAA+AGG 0.605516 7_1:+11471308 Msa1009660:CDS
TTACTATATAAATCAAGCAA+GGG 0.605937 7_1:+11468236 Msa1009660:CDS
GGAGGTTGCGTTGATGGAGA+GGG 0.605995 7_1:+11463929 Msa1009660:CDS
GGAGGTTGCGTTGATGGAGA+GGG 0.605995 7_1:+11466320 Msa1009660:CDS
AGATGATCCACTGGACCCGA+TGG 0.607871 7_1:-11472302 None:intergenic
AGACGGTGAGAAATGTGAGG+AGG 0.609213 7_1:+11466229 Msa1009660:CDS
GAGGATGCTTGAGGTTTCGA+GGG 0.609420 7_1:+11464019 Msa1009660:CDS
TTATGGAAATGGAAAACTTG+GGG 0.612636 7_1:+11469096 Msa1009660:CDS
TCGACTGGGTGACAGTGGAT+GGG 0.613672 7_1:+11473592 Msa1009660:CDS
TAACTCTAATGAGTAAGGAG+GGG 0.614929 7_1:-11463403 None:intergenic
AAAATCAACAGGTGGAGGAG+AGG 0.616530 7_1:-11473878 None:intergenic
CTTCAATGTCGATAGCAAAG+TGG 0.619178 7_1:-11473751 None:intergenic
GTTCACGGTGAAGGGGATGG+TGG 0.622464 7_1:+11463870 Msa1009660:CDS
GTTCACGGTGAAGGGGATGG+TGG 0.622464 7_1:+11466261 Msa1009660:CDS
GGATGCTCAAAGATCAGGCG+TGG 0.622609 7_1:+11468257 Msa1009660:CDS
TCTGATACTGGATGGTGGAG+TGG 0.622951 7_1:-11463436 None:intergenic
GTAATTGCCTGAAGTAATAG+GGG 0.623240 7_1:-11468591 None:intergenic
AGAGGTTGAGGAATGTTGTG+AGG 0.624388 7_1:+11466364 Msa1009660:CDS
CCGGCGGCGTATTGGCCGAG+TGG 0.630885 7_1:-11463708 None:intergenic
CCGGCGGCGTATTGGCCGAG+TGG 0.630885 7_1:-11466099 None:intergenic
GCACTTCAGTATGCTGCTGG+TGG 0.632432 7_1:+11472430 Msa1009660:CDS
CACTTCTGAAGAGAAAGAAG+GGG 0.633656 7_1:-11473910 None:intergenic
CATATTGATGGAATTGCCGA+CGG 0.639784 7_1:-11472394 None:intergenic
TCAGCAACCATCGACTGCAA+GGG 0.640424 7_1:+11471242 Msa1009660:CDS
GTGAAGAAGGAAGCATGTAG+AGG 0.641857 7_1:-11471380 None:intergenic
ATACCGGAATCATGTTCCCA+CGG 0.646015 7_1:-11463782 None:intergenic
ATACCGGAATCATGTTCCCA+CGG 0.646015 7_1:-11466173 None:intergenic
AGAGGAAGGATTTGAAAGCG+AGG 0.646849 7_1:+11464000 Msa1009660:CDS
AGAAGACGGTGAGGAATGTG+AGG 0.646989 7_1:+11463835 Msa1009660:CDS
TATTACGGTTCACGGTGAAG+GGG 0.647653 7_1:+11463863 Msa1009660:CDS
TATTACGGTTCACGGTGAAG+GGG 0.647653 7_1:+11466254 Msa1009660:CDS
CGATTCGCAAAATCTGCCGT+GGG 0.647934 7_1:+11466157 Msa1009660:CDS
AAGCCATTTCAGATTCTAGG+TGG 0.653254 7_1:+11473981 Msa1009660:three_prime_UTR
ATAGATTGAGGAATGTTGTG+AGG 0.653900 7_1:+11463973 Msa1009660:CDS
GAAATGGGATACAGACCACT+CGG 0.655763 7_1:+11463693 Msa1009660:CDS
GAAATGGGATACAGACCACT+CGG 0.655763 7_1:+11466084 Msa1009660:CDS
TTTCGAGGGAAGAAGCGGAG+AGG 0.668597 7_1:+11464033 Msa1009660:CDS
TTTCGAGGGAAGAAGCGGAG+AGG 0.668597 7_1:+11466424 Msa1009660:CDS
GGTTGTCGACTGGGTGACAG+TGG 0.670105 7_1:+11473587 Msa1009660:CDS
ATTGCCTGAAGTAATAGGGG+AGG 0.671022 7_1:-11468588 None:intergenic
ACGAGTTTAACTCAGTGACT+CGG 0.671811 7_1:-11463596 None:intergenic
GTTACGAGGAAATTCCATAC+CGG 0.676098 7_1:-11463798 None:intergenic
GTTACGAGGAAATTCCATAC+CGG 0.676098 7_1:-11466189 None:intergenic
TGGTTGGATCTGATACTGGA+TGG 0.678955 7_1:-11463444 None:intergenic
GGGGCTGATGTGCCTCCAGG+AGG 0.680711 7_1:+11469115 Msa1009660:CDS
TGCCAATGCAGAAATAAGTG+CGG 0.684477 7_1:+11472339 Msa1009660:CDS
CCATCCGAAAGATCTGCCGT+GGG 0.685200 7_1:+11463766 Msa1009660:CDS
ACGAGTTTAACTCAGTGACT+CGG 0.686801 7_1:-11465987 None:intergenic
AGAAGACGGTGAGAAATGTG+AGG 0.686937 7_1:+11466226 Msa1009660:CDS
CGAAATCGGAGAAGACGGTG+AGG 0.699101 7_1:+11463826 Msa1009660:CDS
TTGGATCTGATACTGGATGG+TGG 0.699314 7_1:-11463441 None:intergenic
ACTTCTGAAGAGAAAGAAGG+GGG 0.704062 7_1:-11473909 None:intergenic
CTTATGAAACGTCTGCATGG+AGG 0.715108 7_1:+11469323 Msa1009660:CDS
AATTGAACGAGAAGTAACAT+CGG 0.724131 7_1:-11469348 None:intergenic
TGAATAAGTTATGTGCCGAG+AGG 0.730094 7_1:+11470776 Msa1009660:CDS
CATTGTCATTGAAACCACGA+GGG 0.732985 7_1:+11468374 Msa1009660:CDS
TCATTGTCATTGAAACCACG+AGG 0.733906 7_1:+11468373 Msa1009660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAAAAAAAAAAAAAAA+GGG - chr7_1:11471182-11471201 None:intergenic 0.0%
!! TTTATTAAAAAAAAAAAAAA+AGG - chr7_1:11471183-11471202 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTAATAAA+CGG + chr7_1:11471183-11471202 Msa1009660:intron 0.0%
!!! CAATTTTTATATATTTTTGT+TGG + chr7_1:11469589-11469608 Msa1009660:intron 10.0%
!! TAAGTTCAATTAAATTATTT+AGG + chr7_1:11470494-11470513 Msa1009660:intron 10.0%
!! CTTATATTTATCATATATTA+TGG + chr7_1:11472261-11472280 Msa1009660:intron 10.0%
!!! GAATTGAAAATATTTTATAA+CGG - chr7_1:11472639-11472658 None:intergenic 10.0%
!! AATTTAGTAAATTCATTTAT+AGG + chr7_1:11473054-11473073 Msa1009660:intron 10.0%
!! TTAGTTAAGTTAAAAAAACT+CGG - chr7_1:11463571-11463590 None:intergenic 15.0%
!! ATAATAGACTATAAAGTTAT+TGG + chr7_1:11464758-11464777 Msa1009660:intron 15.0%
!!! AATTCTTTTTTTGTTCAATA+AGG - chr7_1:11465645-11465664 None:intergenic 15.0%
!! TAGTTAAGTTAAAAAAAACT+CGG - chr7_1:11465957-11465976 None:intergenic 15.0%
!! TTTAATTATCACAAATTGAA+CGG - chr7_1:11466642-11466661 None:intergenic 15.0%
!! ATTATAAACTATGAAGTTAT+TGG + chr7_1:11464245-11464264 Msa1009660:intron 15.0%
!! ATAATAGACTATAAAGTTAT+TGG + chr7_1:11464758-11464777 Msa1009660:intron 15.0%
!!! TTTGTGACTATAATTTTTTA+AGG + chr7_1:11468752-11468771 Msa1009660:intron 15.0%
!!! ATTTACAAAGTATTTAAAAG+AGG + chr7_1:11468856-11468875 Msa1009660:intron 15.0%
!! ATATGAAAATAACATAGTTA+TGG + chr7_1:11469030-11469049 Msa1009660:CDS 15.0%
!!! TTTAAAACTTATAGTGAATT+AGG + chr7_1:11469423-11469442 Msa1009660:intron 15.0%
!!! TATATTTAACTTGCTTAAAA+AGG - chr7_1:11469450-11469469 None:intergenic 15.0%
!!! TTTTTGCTTAAATATAGAAA+TGG - chr7_1:11469540-11469559 None:intergenic 15.0%
!!! TAGGAAAAATAATTTTGATA+TGG + chr7_1:11469906-11469925 Msa1009660:intron 15.0%
!!! ATTTTTTTTGATATAGTTCA+TGG + chr7_1:11470257-11470276 Msa1009660:intron 15.0%
!!! TTTTTTTTGATATAGTTCAT+GGG + chr7_1:11470258-11470277 Msa1009660:intron 15.0%
!!! ATTTTCATAATTAAACATGT+CGG - chr7_1:11470389-11470408 None:intergenic 15.0%
!!! ATATTTCTAGCATTAATAAT+TGG - chr7_1:11470620-11470639 None:intergenic 15.0%
!!! TCTTTTTACATCAAAATTTA+TGG + chr7_1:11470639-11470658 Msa1009660:intron 15.0%
!! TTCATTAATTTCTGTATTTA+TGG + chr7_1:11470922-11470941 Msa1009660:intron 15.0%
!!! TTATTTGATTTGCTAAAAAA+AGG - chr7_1:11472141-11472160 None:intergenic 15.0%
!! GTTAGTTATGTTATGTTTAA+TGG - chr7_1:11463467-11463486 None:intergenic 20.0%
!! AACTACAAAACATCAAAATT+AGG - chr7_1:11464112-11464131 None:intergenic 20.0%
!!! TTTGATGTTTTGTAGTTAAT+TGG + chr7_1:11464115-11464134 Msa1009660:intron 20.0%
!! ATAAACTATGAAGTTATTGA+AGG + chr7_1:11464248-11464267 Msa1009660:intron 20.0%
!! TAAACTATGAAGTTATTGAA+GGG + chr7_1:11464249-11464268 Msa1009660:intron 20.0%
!! TATAAGAGATACTATTAAGA+AGG + chr7_1:11464595-11464614 Msa1009660:intron 20.0%
!! GTTAGTTATGTTATGTTTAA+TGG - chr7_1:11463467-11463486 None:intergenic 20.0%
!! AACTACAAAACATCAAAATT+AGG - chr7_1:11464112-11464131 None:intergenic 20.0%
!! TTAATTATCACAAATTGAAC+GGG - chr7_1:11466641-11466660 None:intergenic 20.0%
!! TATAAGAGATACTATTAAGA+AGG + chr7_1:11464595-11464614 Msa1009660:intron 20.0%
!! ATTTATCATAAATTCAACCA+AGG - chr7_1:11467493-11467512 None:intergenic 20.0%
!! TGTATCAATGATATATTTGA+AGG + chr7_1:11465592-11465611 Msa1009660:intron 20.0%
!! TTACTATATAAATCAAGCAA+GGG + chr7_1:11468236-11468255 Msa1009660:CDS 20.0%
!! AAATAGAGAAAATTGATGTT+AGG + chr7_1:11468652-11468671 Msa1009660:CDS 20.0%
!! AATAGAGAAAATTGATGTTA+GGG + chr7_1:11468653-11468672 Msa1009660:CDS 20.0%
!!! TGACTATAATTTTTTAAGGT+TGG + chr7_1:11468756-11468775 Msa1009660:intron 20.0%
!!! ACTTTGTAAATTTAGCATTT+TGG - chr7_1:11468847-11468866 None:intergenic 20.0%
!! TAATTGAAAATATGCAAGTT+TGG - chr7_1:11469003-11469022 None:intergenic 20.0%
!!! AAACTTGCATATTTTCAATT+AGG + chr7_1:11469002-11469021 Msa1009660:intron 20.0%
!!! AATGTGTTATTGAAAATAGT+AGG + chr7_1:11469837-11469856 Msa1009660:intron 20.0%
!!! TTTTTATGACAAATTACCTT+TGG + chr7_1:11470157-11470176 Msa1009660:intron 20.0%
!!! TTTCACATCTAATTATTTTG+AGG + chr7_1:11470187-11470206 Msa1009660:intron 20.0%
!! AATTATCAAATCAGATTTAC+AGG - chr7_1:11470216-11470235 None:intergenic 20.0%
!!! GTAAATCTGATTTGATAATT+TGG + chr7_1:11470216-11470235 Msa1009660:intron 20.0%
!!! TTTTTTTGATATAGTTCATG+GGG + chr7_1:11470259-11470278 Msa1009660:intron 20.0%
!!! GGTTTTAATTCAATTTTACT+GGG - chr7_1:11470307-11470326 None:intergenic 20.0%
!! TAAAATTGAATTAAAACCCA+GGG + chr7_1:11470309-11470328 Msa1009660:intron 20.0%
!!! TTTTCATAATTAAACATGTC+GGG - chr7_1:11470388-11470407 None:intergenic 20.0%
!! TAAAAAATTTATAGTAGGGT+AGG + chr7_1:11470421-11470440 Msa1009660:intron 20.0%
!!! TTTTACATCAAAATTTATGG+TGG + chr7_1:11470642-11470661 Msa1009660:intron 20.0%
!! TTTACATCAAAATTTATGGT+GGG + chr7_1:11470643-11470662 Msa1009660:intron 20.0%
!!! TTGTTATTTGATATATGTAC+TGG + chr7_1:11471044-11471063 Msa1009660:intron 20.0%
!! GAGTTATATTTAAATGAACT+CGG - chr7_1:11471574-11471593 None:intergenic 20.0%
!! TAAATATAACTCAAACAGAT+TGG + chr7_1:11471582-11471601 Msa1009660:intron 20.0%
!! AAATATAACTCAAACAGATT+GGG + chr7_1:11471583-11471602 Msa1009660:intron 20.0%
!! TTTATCATATATTATGGTTC+AGG + chr7_1:11472267-11472286 Msa1009660:intron 20.0%
!! AATATGCAATAGTAATATAG+AGG - chr7_1:11472682-11472701 None:intergenic 20.0%
!!! TTTCAAAGGTATTTACTATT+GGG + chr7_1:11472726-11472745 Msa1009660:intron 20.0%
!!! TGTTTTGGAAGATTTATTAA+AGG + chr7_1:11472893-11472912 Msa1009660:intron 20.0%
!! GATATTTAATATAATGATGC+AGG + chr7_1:11473166-11473185 Msa1009660:intron 20.0%
!!! GACCAATTTTTCTTTAAATT+TGG + chr7_1:11473191-11473210 Msa1009660:intron 20.0%
!! TGCCAAATTTAAAGAAAAAT+TGG - chr7_1:11473196-11473215 None:intergenic 20.0%
!! ATAGTTATCAAAAAAGAGAT+TGG - chr7_1:11473492-11473511 None:intergenic 20.0%
!!! CTTTTTCACATGATTATAAT+AGG - chr7_1:11473631-11473650 None:intergenic 20.0%
!! TTATAATTGCATGTGATTAA+TGG + chr7_1:11474020-11474039 Msa1009660:three_prime_UTR 20.0%
! AAGTTTAACTCTAATGAGTA+AGG - chr7_1:11463411-11463430 None:intergenic 25.0%
! GTTATGTTATGTTTAATGGT+TGG - chr7_1:11463463-11463482 None:intergenic 25.0%
!!! GTTAATTGGTGATTTTGATT+TGG + chr7_1:11464129-11464148 Msa1009660:intron 25.0%
!!! TTTGATTTTGCTCCTAATTA+AGG + chr7_1:11464152-11464171 Msa1009660:intron 25.0%
! TTCTTCACTAAACCTTAATT+AGG - chr7_1:11464167-11464186 None:intergenic 25.0%
! ATGACAACATTAGAGAAAAT+TGG + chr7_1:11464425-11464444 Msa1009660:intron 25.0%
! TGACAACATTAGAGAAAATT+GGG + chr7_1:11464426-11464445 Msa1009660:intron 25.0%
!! GTATCTCTTATAGTTTTTCT+AGG - chr7_1:11464587-11464606 None:intergenic 25.0%
! ATTTATCACAAATTCAACCA+GGG - chr7_1:11464737-11464756 None:intergenic 25.0%
! TATTTATCACAAATTCAACC+AGG - chr7_1:11465039-11465058 None:intergenic 25.0%
! TCGAGTTATTAAATTGTTAC+CGG - chr7_1:11465264-11465283 None:intergenic 25.0%
! CAACAATGATATTTAATCTC+AGG - chr7_1:11465544-11465563 None:intergenic 25.0%
! TTAACTCTAATGAGTAAGAA+GGG - chr7_1:11465793-11465812 None:intergenic 25.0%
! TTTAACTCTAATGAGTAAGA+AGG - chr7_1:11465794-11465813 None:intergenic 25.0%
! GTTATGTTATGTTTAATGGT+TGG - chr7_1:11463463-11463482 None:intergenic 25.0%
!!! TTTGATTTTGCTCCTAATTA+AGG + chr7_1:11464152-11464171 Msa1009660:intron 25.0%
! TTCTTCACTAAACCTTAATT+AGG - chr7_1:11464167-11464186 None:intergenic 25.0%
! TTCTTCACTAAACCTTAATT+AGG - chr7_1:11464167-11464186 None:intergenic 25.0%
! ATAAACTATGAAGTTATTGG+AGG + chr7_1:11466696-11466715 Msa1009660:intron 25.0%
! TAAACTATGAAGTTATTGGA+GGG + chr7_1:11466697-11466716 Msa1009660:intron 25.0%
!! GTATCTCTTATAGTTTTTCT+AGG - chr7_1:11464587-11464606 None:intergenic 25.0%
!! TCGTGTTATTAAATTGTTGT+CGG - chr7_1:11467719-11467738 None:intergenic 25.0%
! CAACAATGATATTTAATCTC+AGG - chr7_1:11465544-11465563 None:intergenic 25.0%
! CTGAGATTAAATATCATTGT+TGG + chr7_1:11465542-11465561 Msa1009660:intron 25.0%
! GTTACTATATAAATCAAGCA+AGG + chr7_1:11468235-11468254 Msa1009660:CDS 25.0%
!! TTTTAGTGCAAAAAATGAGA+AGG + chr7_1:11468305-11468324 Msa1009660:CDS 25.0%
!!! ATCAATTTTCTCTATTTCTC+TGG - chr7_1:11468649-11468668 None:intergenic 25.0%
!! TTATTGATGATTTCTACAGA+AGG - chr7_1:11468783-11468802 None:intergenic 25.0%
!! TTGTAAATTTAGCATTTTGG+CGG - chr7_1:11468844-11468863 None:intergenic 25.0%
!! AAAGAGGCATACAATAATTT+AGG + chr7_1:11468872-11468891 Msa1009660:intron 25.0%
! TTTATGGAAATGGAAAACTT+GGG + chr7_1:11469095-11469114 Msa1009660:CDS 25.0%
!! AGTGTTTATTAGAAGTTTTG+TGG - chr7_1:11469513-11469532 None:intergenic 25.0%
! TTGCTTAAATATAGAAATGG+AGG - chr7_1:11469537-11469556 None:intergenic 25.0%
! TTCACTTTACAATGTAAATG+TGG + chr7_1:11469704-11469723 Msa1009660:intron 25.0%
! ATAAAAAAGCAAATGTCTCA+CGG - chr7_1:11469965-11469984 None:intergenic 25.0%
! ACATGTTTACATGATTGATT+TGG + chr7_1:11470087-11470106 Msa1009660:intron 25.0%
!!! TTTTTTGATATAGTTCATGG+GGG + chr7_1:11470260-11470279 Msa1009660:intron 25.0%
!!! GGGTTTTAATTCAATTTTAC+TGG - chr7_1:11470308-11470327 None:intergenic 25.0%
! GTAAAATTGAATTAAAACCC+AGG + chr7_1:11470308-11470327 Msa1009660:intron 25.0%
! TATTAAAAGCAAAGATTCCT+CGG - chr7_1:11470476-11470495 None:intergenic 25.0%
!!! CTTTTTTTTCAGAGAATCTT+CGG - chr7_1:11470809-11470828 None:intergenic 25.0%
!! AAGATTCTCTGAAAAAAAAG+TGG + chr7_1:11470809-11470828 Msa1009660:CDS 25.0%
! AAAAAGATTGAAGAGTTTGA+TGG + chr7_1:11470832-11470851 Msa1009660:CDS 25.0%
! AATAACAAAATGCATCAACA+TGG - chr7_1:11471032-11471051 None:intergenic 25.0%
! TGAAAGAAGGAAAATACAAT+GGG + chr7_1:11471656-11471675 Msa1009660:intron 25.0%
!!! ACGAAGTGTATTTTTTACTT+TGG + chr7_1:11471990-11472009 Msa1009660:intron 25.0%
! TATTGTTACTCACTAAACTA+CGG - chr7_1:11472024-11472043 None:intergenic 25.0%
! TGTATTCAAAACTTGATCAT+GGG - chr7_1:11472090-11472109 None:intergenic 25.0%
! TTGTATTCAAAACTTGATCA+TGG - chr7_1:11472091-11472110 None:intergenic 25.0%
!!! TTGATTTGCTAAAAAAAGGT+TGG - chr7_1:11472137-11472156 None:intergenic 25.0%
!!! ACAGATTCAATAGTTTTGTT+AGG - chr7_1:11472588-11472607 None:intergenic 25.0%
!!! GTTTCAAAGGTATTTACTAT+TGG + chr7_1:11472725-11472744 Msa1009660:intron 25.0%
!!! TTCAAAGGTATTTACTATTG+GGG + chr7_1:11472727-11472746 Msa1009660:intron 25.0%
! ATCATTTACTGCATTAGAAT+AGG - chr7_1:11472776-11472795 None:intergenic 25.0%
! TTAATCTTGTCCATATTAGA+CGG + chr7_1:11472919-11472938 Msa1009660:intron 25.0%
! AAATTATTAACCATGACTGT+AGG - chr7_1:11473039-11473058 None:intergenic 25.0%
! AAGCTTCAAACAAATTATCA+AGG - chr7_1:11473133-11473152 None:intergenic 25.0%
!!! AATTTTCAGCACTGTTTTAA+GGG - chr7_1:11473359-11473378 None:intergenic 25.0%
!! AAATTTTCAGCACTGTTTTA+AGG - chr7_1:11473360-11473379 None:intergenic 25.0%
!! GAGAAAATTTAAGTCACTTT+AGG - chr7_1:11473706-11473725 None:intergenic 25.0%
! AATCTAAAAAAATCAACAGG+TGG - chr7_1:11473889-11473908 None:intergenic 25.0%
TTAACTCTAATGAGTAAGGA+GGG - chr7_1:11463407-11463426 None:intergenic 30.0%
TTTAACTCTAATGAGTAAGG+AGG - chr7_1:11463408-11463427 None:intergenic 30.0%
ATAACTAACTAACTCGATCT+CGG + chr7_1:11463478-11463497 Msa1009660:five_prime_UTR 30.0%
AGTTAAAAAAACTCGGTATC+CGG - chr7_1:11463564-11463583 None:intergenic 30.0%
TAGTGAAGAATTGTAATCAC+TGG + chr7_1:11464177-11464196 Msa1009660:intron 30.0%
TATGAAGTTATTGAAGGGAA+GGG + chr7_1:11464254-11464273 Msa1009660:intron 30.0%
! AAGGGAAGGGAATATTTTAT+CGG + chr7_1:11464267-11464286 Msa1009660:intron 30.0%
GACAACATTAGAGAAAATTG+GGG + chr7_1:11464427-11464446 Msa1009660:intron 30.0%
AGCATCTATAGTAGAAAAGA+TGG + chr7_1:11464451-11464470 Msa1009660:intron 30.0%
! AGATTAATGAGTTGGAGAAA+TGG + chr7_1:11464624-11464643 Msa1009660:intron 30.0%
TCTATAAACTTCACTCTCTT+TGG + chr7_1:11464809-11464828 Msa1009660:intron 30.0%
ACAGTGTATCATGAAACAAT+GGG - chr7_1:11464890-11464909 None:intergenic 30.0%
AACAGTGTATCATGAAACAA+TGG - chr7_1:11464891-11464910 None:intergenic 30.0%
!! CACAAAGTGTTGTTAAATAG+CGG + chr7_1:11464914-11464933 Msa1009660:intron 30.0%
TTGCAGAATGCAAAATATAG+TGG - chr7_1:11464976-11464995 None:intergenic 30.0%
ATTGGACGATTCTTAATCTA+AGG - chr7_1:11465010-11465029 None:intergenic 30.0%
!! AATTTTCCTGGTTCTTCATT+GGG + chr7_1:11465198-11465217 Msa1009660:intron 30.0%
ACTATGTAGCATCATAACTT+CGG - chr7_1:11465355-11465374 None:intergenic 30.0%
TTTCTATCTCACAACAAAGT+CGG - chr7_1:11465390-11465409 None:intergenic 30.0%
TAACTCTAATGAGTAAGAAG+GGG - chr7_1:11465792-11465811 None:intergenic 30.0%
ATAACTAACTAACTCGATCT+CGG + chr7_1:11463478-11463497 Msa1009660:five_prime_UTR 30.0%
AAATGTGAGGAGGAATATTA+CGG + chr7_1:11466239-11466258 Msa1009660:CDS 30.0%
TAGTGAAGAATTGTAATCAC+TGG + chr7_1:11464177-11464196 Msa1009660:intron 30.0%
CTGGTTCAATTTCCTAATTA+AGG + chr7_1:11466594-11466613 Msa1009660:intron 30.0%
AGCATCTATAGTAGAAAAGA+TGG + chr7_1:11464451-11464470 Msa1009660:intron 30.0%
! AGATTAATGAGTTGGAGAAA+TGG + chr7_1:11464624-11464643 Msa1009660:intron 30.0%
TCTATAAACTTCACTCTCTT+TGG + chr7_1:11464809-11464828 Msa1009660:intron 30.0%
ACAGTGTATCATGAAACAAT+AGG - chr7_1:11464890-11464909 None:intergenic 30.0%
!! CACAAAGTGTTGTTAAATAG+CGG + chr7_1:11464914-11464933 Msa1009660:intron 30.0%
TTGCAGAATGCAAAATATAG+TGG - chr7_1:11464976-11464995 None:intergenic 30.0%
ATTGGACGATTCTTAATCTA+AGG - chr7_1:11465010-11465029 None:intergenic 30.0%
ATCATAAATTCAACCAAGGA+TGG - chr7_1:11467489-11467508 None:intergenic 30.0%
!! AATTTTCCTGGTTCTTCATT+GGG + chr7_1:11465198-11465217 Msa1009660:intron 30.0%
ACTATGTAGCATCATAACTT+CGG - chr7_1:11465355-11465374 None:intergenic 30.0%
TTTCTATCTCACAACAAAGT+CGG - chr7_1:11465390-11465409 None:intergenic 30.0%
TGGTAGTCGAAACTAAAAAT+TGG + chr7_1:11467887-11467906 Msa1009660:intron 30.0%
TGAATGGTTGAGATAATTAG+TGG + chr7_1:11468110-11468129 Msa1009660:intron 30.0%
GAATGGTTGAGATAATTAGT+GGG + chr7_1:11468111-11468130 Msa1009660:intron 30.0%
TATAGTAACAGAGACGTTTA+TGG - chr7_1:11468224-11468243 None:intergenic 30.0%
AGCTGTTTATTCTACTGTTA+AGG + chr7_1:11468329-11468348 Msa1009660:CDS 30.0%
GCTGTTTATTCTACTGTTAA+GGG + chr7_1:11468330-11468349 Msa1009660:CDS 30.0%
GAGGGAAAAGAATATTAGAA+AGG + chr7_1:11468392-11468411 Msa1009660:CDS 30.0%
AGTAATTGCCTGAAGTAATA+GGG - chr7_1:11468595-11468614 None:intergenic 30.0%
!! CATTTTGGCGGATATTTTTT+GGG - chr7_1:11468832-11468851 None:intergenic 30.0%
ACAAACATACTATTGTACTC+TGG - chr7_1:11468909-11468928 None:intergenic 30.0%
! AGTTTTCCATTTCCATAAAG+TGG - chr7_1:11469094-11469113 None:intergenic 30.0%
CTTTATGGAAATGGAAAACT+TGG + chr7_1:11469094-11469113 Msa1009660:CDS 30.0%
TTATGGAAATGGAAAACTTG+GGG + chr7_1:11469096-11469115 Msa1009660:CDS 30.0%
!!! CTTAGACTGAATAGTTTTGT+CGG + chr7_1:11469179-11469198 Msa1009660:intron 30.0%
AATTGAACGAGAAGTAACAT+CGG - chr7_1:11469351-11469370 None:intergenic 30.0%
!! GTTTATTAGAAGTTTTGTGG+TGG - chr7_1:11469510-11469529 None:intergenic 30.0%
! TCACCTCATTTAATTTAAGC+TGG - chr7_1:11469863-11469882 None:intergenic 30.0%
AAGTGTTTCATAATTTCCCT+GGG - chr7_1:11470328-11470347 None:intergenic 30.0%
! TTTATCTTTTTCTATCTCCG+AGG + chr7_1:11470456-11470475 Msa1009660:intron 30.0%
TCCAATACTCTTCAAGAATT+AGG + chr7_1:11470531-11470550 Msa1009660:intron 30.0%
! TCCTAATTCTTGAAGAGTAT+TGG - chr7_1:11470535-11470554 None:intergenic 30.0%
! GATTTTCTACTGTTATGAGT+TGG + chr7_1:11470553-11470572 Msa1009660:intron 30.0%
! GTTATGAGTTGGAAGAAAAA+AGG + chr7_1:11470564-11470583 Msa1009660:intron 30.0%
ATAATTGGATAGAACAGAAC+AGG - chr7_1:11470605-11470624 None:intergenic 30.0%
GAATACATGTAAGTATAAGC+TGG - chr7_1:11470675-11470694 None:intergenic 30.0%
ATGTATTCAGCTAGATGTTT+GGG + chr7_1:11470687-11470706 Msa1009660:intron 30.0%
ACAGACAAATACATTATCCT+AGG - chr7_1:11471005-11471024 None:intergenic 30.0%
AAACGGTTCTTATATATTGC+AGG + chr7_1:11471200-11471219 Msa1009660:intron 30.0%
!!! AAGAAGTGTCTGCTTTTTAT+CGG + chr7_1:11471343-11471362 Msa1009660:CDS 30.0%
! ATTGGAGTATTATAAACCTG+TGG - chr7_1:11471405-11471424 None:intergenic 30.0%
AACGATGAACAAGTATCAAT+TGG - chr7_1:11471423-11471442 None:intergenic 30.0%
ATTCAGATGAAACTGAAAGA+AGG + chr7_1:11471643-11471662 Msa1009660:intron 30.0%
CTGAAAGAAGGAAAATACAA+TGG + chr7_1:11471655-11471674 Msa1009660:intron 30.0%
GAAAGAAGGAAAATACAATG+GGG + chr7_1:11471657-11471676 Msa1009660:intron 30.0%
AAAGAAGGAAAATACAATGG+GGG + chr7_1:11471658-11471677 Msa1009660:intron 30.0%
GTATCTTGAGCTTTCATATT+TGG - chr7_1:11471700-11471719 None:intergenic 30.0%
! GGTAATTACTGAGGATTTTT+CGG + chr7_1:11471882-11471901 Msa1009660:intron 30.0%
CTCGTTCTCAAAAATGTATT+GGG - chr7_1:11472166-11472185 None:intergenic 30.0%
ATATCAGACATCTATGATAG+GGG - chr7_1:11472511-11472530 None:intergenic 30.0%
CATATCAGACATCTATGATA+GGG - chr7_1:11472512-11472531 None:intergenic 30.0%
TAGAGGACAAATATTGAGTA+AGG - chr7_1:11472665-11472684 None:intergenic 30.0%
ACTTACAAACGTAGTTTCAA+AGG + chr7_1:11472712-11472731 Msa1009660:intron 30.0%
!! TCAAAGGTATTTACTATTGG+GGG + chr7_1:11472728-11472747 Msa1009660:intron 30.0%
! AAATGATTTTCTTAATGCGC+AGG + chr7_1:11472789-11472808 Msa1009660:intron 30.0%
TAATCTTGTCCATATTAGAC+GGG + chr7_1:11472920-11472939 Msa1009660:intron 30.0%
! AAAACAGTGCTGAAAATTTC+AGG + chr7_1:11473361-11473380 Msa1009660:intron 30.0%
TGCAATGTAAGACTAGAAAT+GGG - chr7_1:11473522-11473541 None:intergenic 30.0%
TTGCAATGTAAGACTAGAAA+TGG - chr7_1:11473523-11473542 None:intergenic 30.0%
AGTACTTCAAGCATTTACTT+TGG + chr7_1:11473792-11473811 Msa1009660:three_prime_UTR 30.0%
GTACTTCAAGCATTTACTTT+GGG + chr7_1:11473793-11473812 Msa1009660:three_prime_UTR 30.0%
GGGAATCTAAAAAAATCAAC+AGG - chr7_1:11473892-11473911 None:intergenic 30.0%
TTATAAGCTATACGAGAAAC+AGG + chr7_1:11473949-11473968 Msa1009660:three_prime_UTR 30.0%
TATAAGCCATTTCAGATTCT+AGG + chr7_1:11473978-11473997 Msa1009660:three_prime_UTR 30.0%
ACATTAAGAAGTCTAGTTAC+AGG + chr7_1:11474176-11474195 Msa1009660:three_prime_UTR 30.0%
! CACTTATTCTAAGTTTTACG+TGG + chr7_1:11474217-11474236 Msa1009660:three_prime_UTR 30.0%
TTTGTCTTGTGTTGAGTAGA+GGG - chr7_1:11463320-11463339 None:intergenic 35.0%
ACACAACAACAAACAAACAC+CGG + chr7_1:11463344-11463363 Msa1009660:five_prime_UTR 35.0%
ATCTTTCTGATGTGATGATC+CGG - chr7_1:11463366-11463385 None:intergenic 35.0%
TAACTCTAATGAGTAAGGAG+GGG - chr7_1:11463406-11463425 None:intergenic 35.0%
TTAATGGTTGGATCTGATAC+TGG - chr7_1:11463451-11463470 None:intergenic 35.0%
GAATGGCTTCACAAAGAAAT+GGG + chr7_1:11463678-11463697 Msa1009660:CDS 35.0%
GAATGTGAGGAGGAATATTA+CGG + chr7_1:11463848-11463867 Msa1009660:CDS 35.0%
ATAGATTGAGGAATGTTGTG+AGG + chr7_1:11463973-11463992 Msa1009660:CDS 35.0%
CTATGAAGTTATTGAAGGGA+AGG + chr7_1:11464253-11464272 Msa1009660:intron 35.0%
AGATGGTAGAAACTAGACTT+AGG + chr7_1:11464468-11464487 Msa1009660:intron 35.0%
AAACTAGACTTAGGTGGTTT+GGG + chr7_1:11464477-11464496 Msa1009660:intron 35.0%
GCATATAGATAGAAGAACTG+TGG + chr7_1:11464499-11464518 Msa1009660:intron 35.0%
! GAACTGTGGATTTTGTAGTT+AGG + chr7_1:11464513-11464532 Msa1009660:intron 35.0%
AGTTAGGAGAGTAGATTAGA+TGG + chr7_1:11464529-11464548 Msa1009660:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + chr7_1:11464616-11464635 Msa1009660:intron 35.0%
TATGTATCCGATTCACTTAG+TGG + chr7_1:11464678-11464697 Msa1009660:intron 35.0%
ATGTATCCGATTCACTTAGT+GGG + chr7_1:11464679-11464698 Msa1009660:intron 35.0%
TCTTATCCCACTAAGTGAAT+CGG - chr7_1:11464688-11464707 None:intergenic 35.0%
GGTTTAGTGTTGTCATATAG+CGG + chr7_1:11464830-11464849 Msa1009660:intron 35.0%
!! GAATTTTCCTGGTTCTTCAT+TGG + chr7_1:11465197-11465216 Msa1009660:intron 35.0%
GCAAAAAGATGAATAAGCCA+TGG + chr7_1:11465220-11465239 Msa1009660:intron 35.0%
CTGAATGTTATTACATGTGC+CGG + chr7_1:11465290-11465309 Msa1009660:intron 35.0%
TGGTAGTCGAAACTAAAAAC+TGG + chr7_1:11465432-11465451 Msa1009660:intron 35.0%
ATCACCTTGATTATTGTCGT+AGG + chr7_1:11465481-11465500 Msa1009660:intron 35.0%
TATGCCTACGACAATAATCA+AGG - chr7_1:11465488-11465507 None:intergenic 35.0%
TTATTGTCGTAGGCATATTG+TGG + chr7_1:11465491-11465510 Msa1009660:intron 35.0%
TTTGTCTTGTGTTGAGTAGA+GGG - chr7_1:11463320-11463339 None:intergenic 35.0%
TAAGAAGGGGTTATTCTCTA+TGG - chr7_1:11465779-11465798 None:intergenic 35.0%
TTAATGGTTGGATCTGATAC+TGG - chr7_1:11463451-11463470 None:intergenic 35.0%
CACTAATTAGACTCTGTATC+CGG - chr7_1:11465914-11465933 None:intergenic 35.0%
TCTAATTAGTGACTCCTTGT+TGG + chr7_1:11465923-11465942 Msa1009660:intron 35.0%
GAATGGCTTCACAAAGAAAT+GGG + chr7_1:11463678-11463697 Msa1009660:CDS 35.0%
ATTGCCAAATTAGAGAGAGT+TGG + chr7_1:11466879-11466898 Msa1009660:intron 35.0%
TTGCCAAATTAGAGAGAGTT+GGG + chr7_1:11466880-11466899 Msa1009660:intron 35.0%
AAGATGGTAGAAACTAGAGT+TGG + chr7_1:11466921-11466940 Msa1009660:intron 35.0%
AGATGGTAGAAACTAGAGTT+GGG + chr7_1:11466922-11466941 Msa1009660:intron 35.0%
! GACATGTGGATTTTGTAGTT+AGG + chr7_1:11466967-11466986 Msa1009660:intron 35.0%
AGAGTTAAATCACTAGAGGT+AGG + chr7_1:11467011-11467030 Msa1009660:intron 35.0%
GAGTTAAATCACTAGAGGTA+GGG + chr7_1:11467012-11467031 Msa1009660:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + chr7_1:11464616-11464635 Msa1009660:intron 35.0%
TATGTATCCGATTCACTTAG+TGG + chr7_1:11464678-11464697 Msa1009660:intron 35.0%
ATGTATCCGATTCACTTAGT+GGG + chr7_1:11464679-11464698 Msa1009660:intron 35.0%
TCTTATCCCACTAAGTGAAT+CGG - chr7_1:11464688-11464707 None:intergenic 35.0%
TTCAACCAGTGATTACACTA+CGG - chr7_1:11467181-11467200 None:intergenic 35.0%
GGTTTAGTGTTGTCATATAG+CGG + chr7_1:11464830-11464849 Msa1009660:intron 35.0%
!! GAATTTTCCTGGTTCTTCAT+TGG + chr7_1:11465197-11465216 Msa1009660:intron 35.0%
GCAAAAAGATGAATAAGCCA+TGG + chr7_1:11465220-11465239 Msa1009660:intron 35.0%
CTGAATGTTATTACATGTGC+CGG + chr7_1:11465290-11465309 Msa1009660:intron 35.0%
ATCACCTTGATTATTGTCGT+AGG + chr7_1:11465481-11465500 Msa1009660:intron 35.0%
TATGCCTACGACAATAATCA+AGG - chr7_1:11465488-11465507 None:intergenic 35.0%
TTATTGTCGTAGGCATATTG+TGG + chr7_1:11465491-11465510 Msa1009660:intron 35.0%
! TAATGAACGTGTCATTGTTC+TGG + chr7_1:11468084-11468103 Msa1009660:intron 35.0%
! TCTAATATTCTTTTCCCTCG+TGG - chr7_1:11468391-11468410 None:intergenic 35.0%
TGAATCTCTTGTAGCTTACA+TGG + chr7_1:11468419-11468438 Msa1009660:CDS 35.0%
ATAACTGTTCTAACCTCATC+CGG - chr7_1:11468549-11468568 None:intergenic 35.0%
GTAATTGCCTGAAGTAATAG+GGG - chr7_1:11468594-11468613 None:intergenic 35.0%
CAGTAATTGCCTGAAGTAAT+AGG - chr7_1:11468596-11468615 None:intergenic 35.0%
!! GCATTTTGGCGGATATTTTT+TGG - chr7_1:11468833-11468852 None:intergenic 35.0%
ACATACTATTGTACTCTGGT+TGG - chr7_1:11468905-11468924 None:intergenic 35.0%
CAGTATCCACTTTATGGAAA+TGG + chr7_1:11469085-11469104 Msa1009660:CDS 35.0%
GAATAAAGACCTGTCTTTCA+AGG - chr7_1:11469156-11469175 None:intergenic 35.0%
CGACAAAACTATTCAGTCTA+AGG - chr7_1:11469181-11469200 None:intergenic 35.0%
TGTGAACAGAGATACAACAT+TGG - chr7_1:11469224-11469243 None:intergenic 35.0%
AAACTTATGAAACGTCTGCA+TGG + chr7_1:11469320-11469339 Msa1009660:CDS 35.0%
! GATGTTACTTCTCGTTCAAT+TGG + chr7_1:11469350-11469369 Msa1009660:CDS 35.0%
TAATAACTGAACAGAGACGA+GGG - chr7_1:11469648-11469667 None:intergenic 35.0%
TGTGAATTAACGATGTTCAG+TGG + chr7_1:11469677-11469696 Msa1009660:intron 35.0%
!! AGACCTTTATGCTCTGAAAT+GGG + chr7_1:11469744-11469763 Msa1009660:intron 35.0%
CAAGAAGAAGATAAGATGGA+CGG - chr7_1:11469779-11469798 None:intergenic 35.0%
CTTCCAAGAAGAAGATAAGA+TGG - chr7_1:11469783-11469802 None:intergenic 35.0%
CTTATCTTCTTCTTGGAAGA+TGG + chr7_1:11469784-11469803 Msa1009660:intron 35.0%
AGGCCAGCTTAAATTAAATG+AGG + chr7_1:11469857-11469876 Msa1009660:intron 35.0%
CAATTATTAGTTACTCCCTC+TGG - chr7_1:11470002-11470021 None:intergenic 35.0%
GACAATGTCTGAATAAACAC+TGG - chr7_1:11470030-11470049 None:intergenic 35.0%
CAAGTGTTTCATAATTTCCC+TGG - chr7_1:11470329-11470348 None:intergenic 35.0%
CATGTATTCAGCTAGATGTT+TGG + chr7_1:11470686-11470705 Msa1009660:intron 35.0%
!! AAGAGAAGTTGCTGGTTTAA+AGG + chr7_1:11470717-11470736 Msa1009660:CDS 35.0%
! TTTAAGAAGTGCGGTGTATA+TGG - chr7_1:11470878-11470897 None:intergenic 35.0%
!! CGTATTTGCTTTAAGAAGTG+CGG - chr7_1:11470887-11470906 None:intergenic 35.0%
CGCACTTCTTAAAGCAAATA+CGG + chr7_1:11470885-11470904 Msa1009660:CDS 35.0%
ATTATCCTAGGATCCAAACA+GGG - chr7_1:11470993-11471012 None:intergenic 35.0%
GGATAATGTATTTGTCTGTG+TGG + chr7_1:11471006-11471025 Msa1009660:intron 35.0%
TTTGCATATACTGTTCCTAC+CGG + chr7_1:11471096-11471115 Msa1009660:intron 35.0%
AGGGAAAAATAATGCGTTGT+TGG - chr7_1:11471163-11471182 None:intergenic 35.0%
TGAGACTTCAAATAGTGCAA+AGG + chr7_1:11471308-11471327 Msa1009660:CDS 35.0%
TTATAAACCTGTGGTGAAGA+AGG - chr7_1:11471396-11471415 None:intergenic 35.0%
!! TCTTTATGGAGGTGTACTTT+TGG - chr7_1:11471493-11471512 None:intergenic 35.0%
ACCTCCATAAAGATGCTTTA+TGG + chr7_1:11471500-11471519 Msa1009660:intron 35.0%
! TCCATAAAGCATCTTTATGG+AGG - chr7_1:11471504-11471523 None:intergenic 35.0%
TCCATAAAGATGCTTTATGG+AGG + chr7_1:11471503-11471522 Msa1009660:intron 35.0%
! ACCTCCATAAAGCATCTTTA+TGG - chr7_1:11471507-11471526 None:intergenic 35.0%
!! GCTTTATGGAGGTGTATTTT+TGG + chr7_1:11471514-11471533 Msa1009660:intron 35.0%
AAGAAGGAAAATACAATGGG+GGG + chr7_1:11471659-11471678 Msa1009660:intron 35.0%
TGAAAGCTCAAGATACAATG+AGG + chr7_1:11471704-11471723 Msa1009660:intron 35.0%
CATGAATTGAATGCAGTGTA+AGG + chr7_1:11471729-11471748 Msa1009660:intron 35.0%
! CAGTGTAATTTTTGCGTATC+AGG + chr7_1:11471752-11471771 Msa1009660:intron 35.0%
CCTAGACTTCTTATAGGATA+GGG - chr7_1:11471820-11471839 None:intergenic 35.0%
TCCTAGACTTCTTATAGGAT+AGG - chr7_1:11471821-11471840 None:intergenic 35.0%
CCTCGTTCTCAAAAATGTAT+TGG - chr7_1:11472167-11472186 None:intergenic 35.0%
!! CCAATACATTTTTGAGAACG+AGG + chr7_1:11472164-11472183 Msa1009660:intron 35.0%
! TGAGAACGAGGAACTTTTAA+TGG + chr7_1:11472176-11472195 Msa1009660:intron 35.0%
ATTATTGTTCATGCGCTGAA+AGG + chr7_1:11472463-11472482 Msa1009660:intron 35.0%
CCATATCAGACATCTATGAT+AGG - chr7_1:11472513-11472532 None:intergenic 35.0%
CCTATCATAGATGTCTGATA+TGG + chr7_1:11472510-11472529 Msa1009660:intron 35.0%
ATCATAGATGTCTGATATGG+AGG + chr7_1:11472513-11472532 Msa1009660:intron 35.0%
!!! GATGGAAGTTCTTGTTGTTT+TGG + chr7_1:11472545-11472564 Msa1009660:intron 35.0%
AAAGTAGGCATGATTCAACA+AGG - chr7_1:11472967-11472986 None:intergenic 35.0%
ATAGTCCTGTTGAACAAAGT+AGG - chr7_1:11472982-11473001 None:intergenic 35.0%
TTGTTCAACAGGACTATGAA+AGG + chr7_1:11472985-11473004 Msa1009660:intron 35.0%
TATTAACCATGACTGTAGGT+AGG - chr7_1:11473035-11473054 None:intergenic 35.0%
AGGTTTGAATCTGAATGAGA+TGG - chr7_1:11473113-11473132 None:intergenic 35.0%
GCTTCTAACATGTTATGATC+AGG + chr7_1:11473650-11473669 Msa1009660:CDS 35.0%
GGGAATTGTTTAGACAATCT+GGG - chr7_1:11473733-11473752 None:intergenic 35.0%
TGGGAATTGTTTAGACAATC+TGG - chr7_1:11473734-11473753 None:intergenic 35.0%
TTCAATGTCGATAGCAAAGT+GGG - chr7_1:11473753-11473772 None:intergenic 35.0%
! TTCAAGCATTTACTTTGGGA+TGG + chr7_1:11473797-11473816 Msa1009660:three_prime_UTR 35.0%
! TCTTGTTCTTGAGGTTTTCT+TGG - chr7_1:11473852-11473871 None:intergenic 35.0%
AGGTTTCTTTCTTGTTCTTG+AGG - chr7_1:11473861-11473880 None:intergenic 35.0%
CTAAAAAAATCAACAGGTGG+AGG - chr7_1:11473886-11473905 None:intergenic 35.0%
! ACACTTCTGAAGAGAAAGAA+GGG - chr7_1:11473914-11473933 None:intergenic 35.0%
TTACCACCTAGAATCTGAAA+TGG - chr7_1:11473987-11474006 None:intergenic 35.0%
TTACAGAGCTTTACAATCAG+AGG - chr7_1:11474054-11474073 None:intergenic 35.0%
! TGTTTTCAACTTCAACTCTC+TGG - chr7_1:11474093-11474112 None:intergenic 35.0%
! ACAGGTAGACTTATGTTTTG+TGG + chr7_1:11474194-11474213 Msa1009660:three_prime_UTR 35.0%
GTTGAGTAGAGGGAAATTGT+TGG - chr7_1:11463310-11463329 None:intergenic 40.0%
CTTTGTCTTGTGTTGAGTAG+AGG - chr7_1:11463321-11463340 None:intergenic 40.0%
TAAGGAGGGGTTATTCTCTA+TGG - chr7_1:11463393-11463412 None:intergenic 40.0%
ACGAGTTTAACTCAGTGACT+CGG - chr7_1:11463599-11463618 None:intergenic 40.0%
CGAATGGCTTCACAAAGAAA+TGG + chr7_1:11463677-11463696 Msa1009660:CDS 40.0%
GTTACGAGGAAATTCCATAC+CGG - chr7_1:11463801-11463820 None:intergenic 40.0%
AGGAGGAATATTACGGTTCA+CGG + chr7_1:11463855-11463874 Msa1009660:CDS 40.0%
AATATTACGGTTCACGGTGA+AGG + chr7_1:11463861-11463880 Msa1009660:CDS 40.0%
ATATTACGGTTCACGGTGAA+GGG + chr7_1:11463862-11463881 Msa1009660:CDS 40.0%
!! AGAAGGAGGTTGATAGATTG+AGG + chr7_1:11463961-11463980 Msa1009660:CDS 40.0%
! GGGAATATTTTATCGGACAG+TGG + chr7_1:11464274-11464293 Msa1009660:intron 40.0%
TGGTAGAAACTAGACTTAGG+TGG + chr7_1:11464471-11464490 Msa1009660:intron 40.0%
GAAACTAGACTTAGGTGGTT+TGG + chr7_1:11464476-11464495 Msa1009660:intron 40.0%
TAGGAGAGTAGATTAGATGG+AGG + chr7_1:11464532-11464551 Msa1009660:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG + chr7_1:11464533-11464552 Msa1009660:intron 40.0%
TCACTTAGTGGGATAAGACT+TGG + chr7_1:11464690-11464709 Msa1009660:intron 40.0%
TTCAACCAGTGATTGCACTA+CGG - chr7_1:11464725-11464744 None:intergenic 40.0%
ATCACAAATTCAACCAGGGA+TGG - chr7_1:11465034-11465053 None:intergenic 40.0%
CTCTCCATAGATGAGTCAAA+TGG + chr7_1:11465140-11465159 Msa1009660:intron 40.0%
GGAACCATTTGACTCATCTA+TGG - chr7_1:11465147-11465166 None:intergenic 40.0%
! CAAGTGCTACTAACAACACA+AGG - chr7_1:11465168-11465187 None:intergenic 40.0%
! CTTGTGTTGTTAGTAGCACT+TGG + chr7_1:11465166-11465185 Msa1009660:intron 40.0%
TTAGTAGCACTTGGTTGAAG+TGG + chr7_1:11465175-11465194 Msa1009660:intron 40.0%
! TGGTTGAAGTGGAATTTTCC+TGG + chr7_1:11465186-11465205 Msa1009660:intron 40.0%
! TTTTTGCCCAATGAAGAACC+AGG - chr7_1:11465207-11465226 None:intergenic 40.0%
! CTTCGGATTGAAAGCATGTT+CGG - chr7_1:11465338-11465357 None:intergenic 40.0%
!!! GAAAGAACACTTTTTCCTGC+TGG + chr7_1:11465406-11465425 Msa1009660:intron 40.0%
! GTGGTGGTGTTTCAAGATTT+AGG - chr7_1:11465677-11465696 None:intergenic 40.0%
! TAGAGGGAAATTGTTGTTGG+TGG - chr7_1:11465696-11465715 None:intergenic 40.0%
GAGTAGAGGGAAATTGTTGT+TGG - chr7_1:11465699-11465718 None:intergenic 40.0%
CTTTGTCTTGTGTTGAGTAG+AGG - chr7_1:11463321-11463340 None:intergenic 40.0%
TTAGTGACTCCTTGTTGGAA+CGG + chr7_1:11465928-11465947 Msa1009660:intron 40.0%
ACGAGTTTAACTCAGTGACT+CGG - chr7_1:11463599-11463618 None:intergenic 40.0%
CGAATGGCTTCACAAAGAAA+TGG + chr7_1:11463677-11463696 Msa1009660:CDS 40.0%
GTTACGAGGAAATTCCATAC+CGG - chr7_1:11463801-11463820 None:intergenic 40.0%
AGGAGGAATATTACGGTTCA+CGG + chr7_1:11463855-11463874 Msa1009660:CDS 40.0%
AATATTACGGTTCACGGTGA+AGG + chr7_1:11463861-11463880 Msa1009660:CDS 40.0%
ATATTACGGTTCACGGTGAA+GGG + chr7_1:11463862-11463881 Msa1009660:CDS 40.0%
GAGAATGCTTGAAGTTTCGA+GGG + chr7_1:11466410-11466429 Msa1009660:CDS 40.0%
ACTATGAAGTTATTGGAGGG+AGG + chr7_1:11466700-11466719 Msa1009660:intron 40.0%
CTATGAAGTTATTGGAGGGA+GGG + chr7_1:11466701-11466720 Msa1009660:intron 40.0%
TATGAAGTTATTGGAGGGAG+GGG + chr7_1:11466702-11466721 Msa1009660:intron 40.0%
! GAGGGAGGGGAAAATTTTAT+CGG + chr7_1:11466715-11466734 Msa1009660:intron 40.0%
! GGGAAAATTTTATCGGACAG+TGG + chr7_1:11466722-11466741 Msa1009660:intron 40.0%
AGTTAAGCGTAACAGAGATG+AGG + chr7_1:11466805-11466824 Msa1009660:intron 40.0%
TGCCAAATTAGAGAGAGTTG+GGG + chr7_1:11466881-11466900 Msa1009660:intron 40.0%
TACCCCAACTCTCTCTAATT+TGG - chr7_1:11466886-11466905 None:intergenic 40.0%
ACATGTAGTGAGAAGACATG+TGG + chr7_1:11466953-11466972 Msa1009660:intron 40.0%
AGTTAGGAGAGTAGATCAGA+TGG + chr7_1:11466983-11467002 Msa1009660:intron 40.0%
GGAGAGAGTTAAATCACTAG+AGG + chr7_1:11467007-11467026 Msa1009660:intron 40.0%
TCACTTAGTGGGATAAGACT+TGG + chr7_1:11464690-11464709 Msa1009660:intron 40.0%
TAAGACCGTAGTGTAATCAC+TGG + chr7_1:11467173-11467192 Msa1009660:intron 40.0%
AATTCAACCAAGGATGGCAT+TGG - chr7_1:11467483-11467502 None:intergenic 40.0%
CTCTCCATAGATGAGTCAAA+TGG + chr7_1:11465140-11465159 Msa1009660:intron 40.0%
GGAACCATTTGACTCATCTA+TGG - chr7_1:11465147-11465166 None:intergenic 40.0%
! CAAGTGCTACTAACAACACA+AGG - chr7_1:11465168-11465187 None:intergenic 40.0%
! CTTGTGTTGTTAGTAGCACT+TGG + chr7_1:11465166-11465185 Msa1009660:intron 40.0%
TTAGTAGCACTTGGTTGAAG+TGG + chr7_1:11465175-11465194 Msa1009660:intron 40.0%
! TGGTTGAAGTGGAATTTTCC+TGG + chr7_1:11465186-11465205 Msa1009660:intron 40.0%
! TTTTTGCCCAATGAAGAACC+AGG - chr7_1:11465207-11465226 None:intergenic 40.0%
! CTTCGGATTGAAAGCATGTT+CGG - chr7_1:11465338-11465357 None:intergenic 40.0%
!!! GAAAGAACACTTTTTCCTGC+TGG + chr7_1:11465406-11465425 Msa1009660:intron 40.0%
! GTCATTGTTCTGGCATTGAA+TGG + chr7_1:11468094-11468113 Msa1009660:intron 40.0%
TTCTCGAAGCTTCATCACAT+TGG - chr7_1:11468188-11468207 None:intergenic 40.0%
TCATTGTCATTGAAACCACG+AGG + chr7_1:11468373-11468392 Msa1009660:CDS 40.0%
CATTGTCATTGAAACCACGA+GGG + chr7_1:11468374-11468393 Msa1009660:CDS 40.0%
! AGTTCTTTTCCTGCTTACGA+AGG + chr7_1:11468456-11468475 Msa1009660:CDS 40.0%
!! AAGCTGGGGTTTGATTTTGA+TGG + chr7_1:11468516-11468535 Msa1009660:CDS 40.0%
!! AGCTGGGGTTTGATTTTGAT+GGG + chr7_1:11468517-11468536 Msa1009660:CDS 40.0%
!! TGATTTTGATGGGCAGATTC+CGG + chr7_1:11468527-11468546 Msa1009660:CDS 40.0%
GCATACACTTCTCACTTGAA+AGG + chr7_1:11468615-11468634 Msa1009660:CDS 40.0%
ATGGATGTTTCCTCTTCTGA+CGG + chr7_1:11469049-11469068 Msa1009660:CDS 40.0%
CCATAAAGTGGATACTGTAG+AGG - chr7_1:11469082-11469101 None:intergenic 40.0%
CCTCTACAGTATCCACTTTA+TGG + chr7_1:11469079-11469098 Msa1009660:CDS 40.0%
AAATCAGCTCCTTGAAAGAC+AGG + chr7_1:11469144-11469163 Msa1009660:CDS 40.0%
! AGCTCATGTTCAGCAGTTTT+TGG + chr7_1:11469247-11469266 Msa1009660:CDS 40.0%
TAAACAATGCTGCAGAAGCA+AGG + chr7_1:11469285-11469304 Msa1009660:CDS 40.0%
AAACAATGCTGCAGAAGCAA+GGG + chr7_1:11469286-11469305 Msa1009660:CDS 40.0%
!!! ACTTCCAACATTTTGAGACG+TGG - chr7_1:11469378-11469397 None:intergenic 40.0%
TGGAAGTCTTAGACAACTTC+AGG + chr7_1:11469391-11469410 Msa1009660:CDS 40.0%
GTAGTAGGAATCACACACAA+AGG - chr7_1:11469488-11469507 None:intergenic 40.0%
!! AGAAGTTTTGTGGTGGTAGT+AGG - chr7_1:11469503-11469522 None:intergenic 40.0%
CTAATAACTGAACAGAGACG+AGG - chr7_1:11469649-11469668 None:intergenic 40.0%
!! CAGACCTTTATGCTCTGAAA+TGG + chr7_1:11469743-11469762 Msa1009660:intron 40.0%
CTTCCCATTTCAGAGCATAA+AGG - chr7_1:11469750-11469769 None:intergenic 40.0%
CGTCCATCTTATCTTCTTCT+TGG + chr7_1:11469777-11469796 Msa1009660:intron 40.0%
! ATGCTTCTGTTTGAAACCAG+AGG + chr7_1:11469983-11470002 Msa1009660:intron 40.0%
! TGCTTCTGTTTGAAACCAGA+GGG + chr7_1:11469984-11470003 Msa1009660:intron 40.0%
GACATTGTCTTAAGCTGCTT+TGG + chr7_1:11470041-11470060 Msa1009660:intron 40.0%
GATGTGAAAAGCTGAACCAA+AGG - chr7_1:11470176-11470195 None:intergenic 40.0%
GCGTTGTATTTCAGACATCA+AGG - chr7_1:11470755-11470774 None:intergenic 40.0%
TGAATAAGTTATGTGCCGAG+AGG + chr7_1:11470776-11470795 Msa1009660:CDS 40.0%
TGTACTTATTGCCAAGCCTT+GGG + chr7_1:11470956-11470975 Msa1009660:intron 40.0%
AACCATTATTACCCAAGGCT+TGG - chr7_1:11470970-11470989 None:intergenic 40.0%
GGTAATAATGGTTCCCTGTT+TGG + chr7_1:11470977-11470996 Msa1009660:intron 40.0%
CATTATCCTAGGATCCAAAC+AGG - chr7_1:11470994-11471013 None:intergenic 40.0%
!! TGTACTGGCTACTTAGACAA+TGG + chr7_1:11471059-11471078 Msa1009660:intron 40.0%
TTGCATATACTGTTCCTACC+GGG + chr7_1:11471097-11471116 Msa1009660:intron 40.0%
AAATGAACACCATTAAGGCC+CGG - chr7_1:11471118-11471137 None:intergenic 40.0%
GAGGGAAATGAACACCATTA+AGG - chr7_1:11471123-11471142 None:intergenic 40.0%
AGCATGTAGAGGCTATTATC+TGG - chr7_1:11471372-11471391 None:intergenic 40.0%
! GACACAATGTTCCGAGTTTT+TGG + chr7_1:11471458-11471477 Msa1009660:intron 40.0%
!! ATGTTCCGAGTTTTTGGATC+AGG + chr7_1:11471464-11471483 Msa1009660:intron 40.0%
!! TGTTCCGAGTTTTTGGATCA+GGG + chr7_1:11471465-11471484 Msa1009660:intron 40.0%
GATCTTCCATTTCTACCGTT+TGG + chr7_1:11471536-11471555 Msa1009660:intron 40.0%
TGACTACCAAACGGTAGAAA+TGG - chr7_1:11471545-11471564 None:intergenic 40.0%
CGGAAACTATGACTACCAAA+CGG - chr7_1:11471554-11471573 None:intergenic 40.0%
CCCTATCCTATAAGAAGTCT+AGG + chr7_1:11471817-11471836 Msa1009660:intron 40.0%
CTTGCTCCTAGACTTCTTAT+AGG - chr7_1:11471826-11471845 None:intergenic 40.0%
TCCTCTGATTATTCTGCAAG+AGG + chr7_1:11471912-11471931 Msa1009660:intron 40.0%
TCTGATTATTCTGCAAGAGG+CGG + chr7_1:11471915-11471934 Msa1009660:intron 40.0%
AAAGTTGCATGTGAGAGAAG+TGG + chr7_1:11471938-11471957 Msa1009660:intron 40.0%
CAAAACAAGGGATACGGTAT+AGG - chr7_1:11472061-11472080 None:intergenic 40.0%
ACAGAGCAAAACAAGGGATA+CGG - chr7_1:11472067-11472086 None:intergenic 40.0%
TGCCAATGCAGAAATAAGTG+CGG + chr7_1:11472339-11472358 Msa1009660:CDS 40.0%
CATATTGATGGAATTGCCGA+CGG - chr7_1:11472397-11472416 None:intergenic 40.0%
CGGCAATTCCATCAATATGT+CGG + chr7_1:11472398-11472417 Msa1009660:CDS 40.0%
GGCAATTCCATCAATATGTC+GGG + chr7_1:11472399-11472418 Msa1009660:CDS 40.0%
AACAACAAGAACTTCCATCC+TGG - chr7_1:11472544-11472563 None:intergenic 40.0%
! ATTTTCTTAATGCGCAGGCT+TGG + chr7_1:11472794-11472813 Msa1009660:intron 40.0%
ACGTTTCAAGCAAAACTCCA+GGG - chr7_1:11472856-11472875 None:intergenic 40.0%
! TGGTTCAGAAGCTAGTGTTT+TGG + chr7_1:11472878-11472897 Msa1009660:intron 40.0%
TCATGCCTACTTTGTTCAAC+AGG + chr7_1:11472974-11472993 Msa1009660:intron 40.0%
ATGACTGTAGGTAGGATTTG+GGG - chr7_1:11473027-11473046 None:intergenic 40.0%
CATGACTGTAGGTAGGATTT+GGG - chr7_1:11473028-11473047 None:intergenic 40.0%
AGAACAAGAAAGAGCTGTCA+CGG + chr7_1:11473218-11473237 Msa1009660:intron 40.0%
AAAGAGCTGTCACGGAAAAA+TGG + chr7_1:11473226-11473245 Msa1009660:intron 40.0%
AAAACACCAGTCTTGAGTTC+AGG - chr7_1:11473255-11473274 None:intergenic 40.0%
TTTGAATGCTCAGCAGAGTT+TGG + chr7_1:11473272-11473291 Msa1009660:intron 40.0%
CTTCAATGTCGATAGCAAAG+TGG - chr7_1:11473754-11473773 None:intergenic 40.0%
! ACTTCTGAAGAGAAAGAAGG+GGG - chr7_1:11473912-11473931 None:intergenic 40.0%
! CACTTCTGAAGAGAAAGAAG+GGG - chr7_1:11473913-11473932 None:intergenic 40.0%
! CACACTTCTGAAGAGAAAGA+AGG - chr7_1:11473915-11473934 None:intergenic 40.0%
AAGCCATTTCAGATTCTAGG+TGG + chr7_1:11473981-11474000 Msa1009660:three_prime_UTR 40.0%
CAACTTCATTTATTGCGCAC+TGG + chr7_1:11474117-11474136 Msa1009660:three_prime_UTR 40.0%
TTGGATCTGATACTGGATGG+TGG - chr7_1:11463444-11463463 None:intergenic 45.0%
TGGTTGGATCTGATACTGGA+TGG - chr7_1:11463447-11463466 None:intergenic 45.0%
CACTAATGAGGCTCTGTATC+CGG - chr7_1:11463528-11463547 None:intergenic 45.0%
CCAATAACGAGCCACTAATG+AGG - chr7_1:11463540-11463559 None:intergenic 45.0%
CCTCATTAGTGGCTCGTTAT+TGG + chr7_1:11463537-11463556 Msa1009660:five_prime_UTR 45.0%
TTAGTGGCTCGTTATTGGAC+CGG + chr7_1:11463542-11463561 Msa1009660:five_prime_UTR 45.0%
ACAATCTTCATCTCCGTCAC+CGG + chr7_1:11463644-11463663 Msa1009660:CDS 45.0%
GAAATGGGATACAGACCACT+CGG + chr7_1:11463693-11463712 Msa1009660:CDS 45.0%
! TTTCGGATGGATTCGACTGA+CGG - chr7_1:11463756-11463775 None:intergenic 45.0%
ATACCGGAATCATGTTCCCA+CGG - chr7_1:11463785-11463804 None:intergenic 45.0%
TATTACGGTTCACGGTGAAG+GGG + chr7_1:11463863-11463882 Msa1009660:CDS 45.0%
AGGAAGAAGGAGAAGAGAGA+AGG + chr7_1:11463897-11463916 Msa1009660:CDS 45.0%
GGAAGAAGGAGAAGAGAGAA+GGG + chr7_1:11463898-11463917 Msa1009660:CDS 45.0%
GAAGAAGGAGAAGAGAGAAG+GGG + chr7_1:11463899-11463918 Msa1009660:CDS 45.0%
AGAGGAAGGATTTGAAAGCG+AGG + chr7_1:11464000-11464019 Msa1009660:CDS 45.0%
TTTGAAAGCGAGGATGCTTG+AGG + chr7_1:11464010-11464029 Msa1009660:CDS 45.0%
GGAAGAGGATGCTTGATGAA+CGG + chr7_1:11464054-11464073 Msa1009660:CDS 45.0%
GAAGAGGATGCTTGATGAAC+GGG + chr7_1:11464055-11464074 Msa1009660:CDS 45.0%
TTGATGAACGGGCGAATTAC+AGG + chr7_1:11464066-11464085 Msa1009660:CDS 45.0%
! AACGGGCGAATTACAGGTTT+TGG + chr7_1:11464072-11464091 Msa1009660:intron 45.0%
TTATCGGACAGTGGTAAGAC+TGG + chr7_1:11464283-11464302 Msa1009660:intron 45.0%
! GTACGAGACAGAGTGTTTGA+CGG + chr7_1:11464313-11464332 Msa1009660:intron 45.0%
CGCTTAACTTATGTTCGTGC+TGG - chr7_1:11464346-11464365 None:intergenic 45.0%
CAGAGATGAGAATGTTGCGT+TGG + chr7_1:11464369-11464388 Msa1009660:intron 45.0%
GGAGAGTAGATTAGATGGAG+GGG + chr7_1:11464534-11464553 Msa1009660:intron 45.0%
GAGCCAAATCACTAGAGGTA+GGG + chr7_1:11464556-11464575 Msa1009660:intron 45.0%
AGCCAAATCACTAGAGGTAG+GGG + chr7_1:11464557-11464576 Msa1009660:intron 45.0%
TTCCCCTACCTCTAGTGATT+TGG - chr7_1:11464562-11464581 None:intergenic 45.0%
CTTAGTGGGATAAGACTTGG+TGG + chr7_1:11464693-11464712 Msa1009660:intron 45.0%
TAAGACCGTAGTGCAATCAC+TGG + chr7_1:11464717-11464736 Msa1009660:intron 45.0%
AATTCAACCAGGGATGGCAT+TGG - chr7_1:11465028-11465047 None:intergenic 45.0%
GTCTATGTGTCAGTGTTCCA+TGG - chr7_1:11465240-11465259 None:intergenic 45.0%
GAACACTGACACATAGACAC+CGG + chr7_1:11465242-11465261 Msa1009660:intron 45.0%
!!! ACACTTTTTCCTGCTGGCTT+TGG + chr7_1:11465412-11465431 Msa1009660:intron 45.0%
! AGGGAAATTGTTGTTGGTGG+TGG - chr7_1:11465693-11465712 None:intergenic 45.0%
TTGGATCTGATACTGGATGG+TGG - chr7_1:11463444-11463463 None:intergenic 45.0%
TGGTTGGATCTGATACTGGA+TGG - chr7_1:11463447-11463466 None:intergenic 45.0%
TAGACTCTGTATCCGGTATC+CGG - chr7_1:11465907-11465926 None:intergenic 45.0%
GAAATGGGATACAGACCACT+CGG + chr7_1:11463693-11463712 Msa1009660:CDS 45.0%
!! TTGCGAATCGATTCGACTGA+CGG - chr7_1:11466147-11466166 None:intergenic 45.0%
ATACCGGAATCATGTTCCCA+CGG - chr7_1:11463785-11463804 None:intergenic 45.0%
AGAAGACGGTGAGAAATGTG+AGG + chr7_1:11466226-11466245 Msa1009660:CDS 45.0%
TATTACGGTTCACGGTGAAG+GGG + chr7_1:11463863-11463882 Msa1009660:CDS 45.0%
AGGAAGAAGGAGAAGAGAGA+AGG + chr7_1:11463897-11463916 Msa1009660:CDS 45.0%
GGAAGAAGGAGAAGAGAGAA+GGG + chr7_1:11463898-11463917 Msa1009660:CDS 45.0%
GAAGAAGGAGAAGAGAGAAG+GGG + chr7_1:11463899-11463918 Msa1009660:CDS 45.0%
AGAGGTTGAGGAATGTTGTG+AGG + chr7_1:11466364-11466383 Msa1009660:CDS 45.0%
CGAGAATGCTTGAAGTTTCG+AGG + chr7_1:11466409-11466428 Msa1009660:CDS 45.0%
TGAAGTTTCGAGGGAAGAAG+CGG + chr7_1:11466419-11466438 Msa1009660:CDS 45.0%
GGAAGAGGATGCTTGATGAA+CGG + chr7_1:11464054-11464073 Msa1009660:CDS 45.0%
GAAGAGGATGCTTGATGAAC+GGG + chr7_1:11464055-11464074 Msa1009660:CDS 45.0%
TTGATGAACGGGCGAATTAC+AGG + chr7_1:11464066-11464085 Msa1009660:CDS 45.0%
! AACGGGCGAATTACAGGTTT+TGG + chr7_1:11464072-11464091 Msa1009660:intron 45.0%
TTATCGGACAGTGGTAAGAC+TGG + chr7_1:11464283-11464302 Msa1009660:intron 45.0%
TGTTGTACGAGACAGAGTGT+TGG + chr7_1:11466757-11466776 Msa1009660:intron 45.0%
! GTTGTACGAGACAGAGTGTT+GGG + chr7_1:11466758-11466777 Msa1009660:intron 45.0%
TGGTAGAAACTAGAGTTGGG+TGG + chr7_1:11466925-11466944 Msa1009660:intron 45.0%
TAGGAGAGTAGATCAGATGG+AGG + chr7_1:11466986-11467005 Msa1009660:intron 45.0%
CTTAGTGGGATAAGACTTGG+TGG + chr7_1:11464693-11464712 Msa1009660:intron 45.0%
CGGCTATAGCGATTACATAG+TGG + chr7_1:11467306-11467325 Msa1009660:intron 45.0%
GTCTATGTGTCAGTGTTCCA+TGG - chr7_1:11465240-11465259 None:intergenic 45.0%
!!! ACACTTTTTCCTGCTGGCTT+TGG + chr7_1:11465412-11465431 Msa1009660:intron 45.0%
ACTTGCTTATGCCTGCAGAA+TGG - chr7_1:11468144-11468163 None:intergenic 45.0%
CAGGCATAAGCAAGTGATGT+TGG + chr7_1:11468149-11468168 Msa1009660:intron 45.0%
GCATAAGCAAGTGATGTTGG+AGG + chr7_1:11468152-11468171 Msa1009660:CDS 45.0%
TTCATCACATTGGCGGTCAT+AGG - chr7_1:11468178-11468197 None:intergenic 45.0%
TCGAAGCTTCATCACATTGG+CGG - chr7_1:11468185-11468204 None:intergenic 45.0%
CGTGGATTCTTCCGTTGAAA+TGG + chr7_1:11468275-11468294 Msa1009660:CDS 45.0%
TTTCCTGCTTACGAAGGAAG+TGG + chr7_1:11468462-11468481 Msa1009660:CDS 45.0%
GTAATAGGGGAGGACTCTTT+AGG - chr7_1:11468581-11468600 None:intergenic 45.0%
ATTGCCTGAAGTAATAGGGG+AGG - chr7_1:11468591-11468610 None:intergenic 45.0%
TATTGTACTCTGGTTGGCAG+GGG - chr7_1:11468899-11468918 None:intergenic 45.0%
CTATTGTACTCTGGTTGGCA+GGG - chr7_1:11468900-11468919 None:intergenic 45.0%
ACTATTGTACTCTGGTTGGC+AGG - chr7_1:11468901-11468920 None:intergenic 45.0%
!!! TGATTTTGACTTCCTCCTGG+AGG - chr7_1:11469130-11469149 None:intergenic 45.0%
!!! AGCTGATTTTGACTTCCTCC+TGG - chr7_1:11469133-11469152 None:intergenic 45.0%
CTTATGAAACGTCTGCATGG+AGG + chr7_1:11469323-11469342 Msa1009660:CDS 45.0%
AACAGAGACGAGGGTAATTC+GGG - chr7_1:11469639-11469658 None:intergenic 45.0%
GAACAGAGACGAGGGTAATT+CGG - chr7_1:11469640-11469659 None:intergenic 45.0%
!! TGCTCTGAAATGGGAAGAAG+TGG + chr7_1:11469753-11469772 Msa1009660:intron 45.0%
CTTGGAAGATGGTAGTACAC+TGG + chr7_1:11469795-11469814 Msa1009660:intron 45.0%
TCAGCTAGATGTTTGGGCAA+AGG + chr7_1:11470693-11470712 Msa1009660:intron 45.0%
GCAAAGGAAAGAGAAGTTGC+TGG + chr7_1:11470709-11470728 Msa1009660:CDS 45.0%
ATCTTCGGCTTCTTTCCTCT+CGG - chr7_1:11470794-11470813 None:intergenic 45.0%
CTGTACTTATTGCCAAGCCT+TGG + chr7_1:11470955-11470974 Msa1009660:intron 45.0%
TGCCAAGCCTTGGGTAATAA+TGG + chr7_1:11470965-11470984 Msa1009660:intron 45.0%
CAGGGAACCATTATTACCCA+AGG - chr7_1:11470975-11470994 None:intergenic 45.0%
!! TGCAGGATGCTGCTTCATTT+TGG + chr7_1:11471217-11471236 Msa1009660:intron 45.0%
TCAACAACAGCAGAACATGC+TGG - chr7_1:11471291-11471310 None:intergenic 45.0%
! GTGAAGAAGGAAGCATGTAG+AGG - chr7_1:11471383-11471402 None:intergenic 45.0%
GGTACCCTGATCCAAAAACT+CGG - chr7_1:11471472-11471491 None:intergenic 45.0%
AAGGAAAATACAATGGGGGG+TGG + chr7_1:11471662-11471681 Msa1009660:intron 45.0%
!! GCAAGAGACTTTCTGAAGCT+CGG + chr7_1:11471841-11471860 Msa1009660:intron 45.0%
GCTGGCTAAGGTAATTACTG+AGG + chr7_1:11471873-11471892 Msa1009660:intron 45.0%
GCCTCTTGCAGAATAATCAG+AGG - chr7_1:11471916-11471935 None:intergenic 45.0%
TTGCATGTGAGAGAAGTGGT+TGG + chr7_1:11471942-11471961 Msa1009660:intron 45.0%
TGCATGTGAGAGAAGTGGTT+GGG + chr7_1:11471943-11471962 Msa1009660:intron 45.0%
CATGGGACAGAGCAAAACAA+GGG - chr7_1:11472073-11472092 None:intergenic 45.0%
TCATGGGACAGAGCAAAACA+AGG - chr7_1:11472074-11472093 None:intergenic 45.0%
!! AGCCGCACTTATTTCTGCAT+TGG - chr7_1:11472344-11472363 None:intergenic 45.0%
!!! GCTATTTTGACAGCAAGAGC+CGG + chr7_1:11472361-11472380 Msa1009660:CDS 45.0%
TCAGACATCTATGATAGGGG+TGG - chr7_1:11472508-11472527 None:intergenic 45.0%
! ATTGGGGGTATGCATATACG+TGG + chr7_1:11472743-11472762 Msa1009660:intron 45.0%
! TTGGGGGTATGCATATACGT+GGG + chr7_1:11472744-11472763 Msa1009660:intron 45.0%
GACGTTTCAAGCAAAACTCC+AGG - chr7_1:11472857-11472876 None:intergenic 45.0%
! GAGTTTTGCTTGAAACGTCG+TGG + chr7_1:11472858-11472877 Msa1009660:intron 45.0%
GCACAAGATCCCGTCTAATA+TGG - chr7_1:11472932-11472951 None:intergenic 45.0%
TGACTGTAGGTAGGATTTGG+GGG - chr7_1:11473026-11473045 None:intergenic 45.0%
CCATGACTGTAGGTAGGATT+TGG - chr7_1:11473029-11473048 None:intergenic 45.0%
CCAAATCCTACCTACAGTCA+TGG + chr7_1:11473026-11473045 Msa1009660:intron 45.0%
TGCTTAGCAGAAGTTGCATC+AGG - chr7_1:11473392-11473411 None:intergenic 45.0%
TTCTTCTGCAGCTTGATGAG+TGG + chr7_1:11473544-11473563 Msa1009660:intron 45.0%
AAAATCAACAGGTGGAGGAG+AGG - chr7_1:11473881-11473900 None:intergenic 45.0%
!!! AATTAAATGAATTTTAATTT+AGG + chr7_1:11469887-11469906 Msa1009660:intron 5.0%
!! TATATTAAAAAATTTATAGT+AGG + chr7_1:11470416-11470435 Msa1009660:intron 5.0%
!! ATATTAAAAAATTTATAGTA+GGG + chr7_1:11470417-11470436 Msa1009660:intron 5.0%
!! TCTGATACTGGATGGTGGAG+TGG - chr7_1:11463439-11463458 None:intergenic 50.0%
ATCTCGGCTTAGTCGCTTCT+TGG + chr7_1:11463494-11463513 Msa1009660:five_prime_UTR 50.0%
CGGATACAGAGCCTCATTAG+TGG + chr7_1:11463526-11463545 Msa1009660:five_prime_UTR 50.0%
! AGCCATTCGAGTATCGCTTC+CGG - chr7_1:11463666-11463685 None:intergenic 50.0%
! CGGTGAATGCGATTTTCCTC+CGG - chr7_1:11463736-11463755 None:intergenic 50.0%
TGTTCCCACGGCAGATCTTT+CGG - chr7_1:11463773-11463792 None:intergenic 50.0%
GTGGGAACATGATTCCGGTA+TGG + chr7_1:11463784-11463803 Msa1009660:CDS 50.0%
AGAAGACGGTGAGGAATGTG+AGG + chr7_1:11463835-11463854 Msa1009660:CDS 50.0%
GGAATGTTGTGAGGAGACAG+AGG + chr7_1:11463982-11464001 Msa1009660:CDS 50.0%
TGTTGTGAGGAGACAGAGGA+AGG + chr7_1:11463986-11464005 Msa1009660:CDS 50.0%
GAGGATGCTTGAGGTTTCGA+GGG + chr7_1:11464019-11464038 Msa1009660:CDS 50.0%
TGAGGTTTCGAGGGAAGAAG+CGG + chr7_1:11464028-11464047 Msa1009660:CDS 50.0%
! GAGAATGTTGCGTTGGTGTG+TGG + chr7_1:11464376-11464395 Msa1009660:intron 50.0%
GGAGCCAAATCACTAGAGGT+AGG + chr7_1:11464555-11464574 Msa1009660:intron 50.0%
CGGCTATAGCGATGACATAG+TGG + chr7_1:11464850-11464869 Msa1009660:intron 50.0%
TTTCGACTACCAAAGCCAGC+AGG - chr7_1:11465424-11465443 None:intergenic 50.0%
!! TCTGATACTGGATGGTGGAG+TGG - chr7_1:11463439-11463458 None:intergenic 50.0%
ATCTCGGCTTAGTCGCTTCT+TGG + chr7_1:11463494-11463513 Msa1009660:five_prime_UTR 50.0%
ACTCGGTATCCGTTCCAACA+AGG - chr7_1:11465940-11465959 None:intergenic 50.0%
ACAATCTTCATCGCCGTCAC+CGG + chr7_1:11466035-11466054 Msa1009660:CDS 50.0%
! AGCCATTCGAGTATCGCTTC+CGG - chr7_1:11463666-11463685 None:intergenic 50.0%
! CGGTGAATGCGATTTTCCTC+CGG - chr7_1:11463736-11463755 None:intergenic 50.0%
! TCGATTCGCAAAATCTGCCG+TGG + chr7_1:11466156-11466175 Msa1009660:CDS 50.0%
CGATTCGCAAAATCTGCCGT+GGG + chr7_1:11466157-11466176 Msa1009660:CDS 50.0%
GTGGGAACATGATTCCGGTA+TGG + chr7_1:11463784-11463803 Msa1009660:CDS 50.0%
AGACGGTGAGAAATGTGAGG+AGG + chr7_1:11466229-11466248 Msa1009660:CDS 50.0%
AGAAGGAGGTTGAGAGGTTG+AGG + chr7_1:11466352-11466371 Msa1009660:CDS 50.0%
GGAATGTTGTGAGGAGACAG+AGG + chr7_1:11463982-11464001 Msa1009660:CDS 50.0%
TGTTGTGAGGAGACAGAGGA+AGG + chr7_1:11463986-11464005 Msa1009660:CDS 50.0%
! TGAGGATGTTGCTGTTGCGT+TGG + chr7_1:11466823-11466842 Msa1009660:intron 50.0%
! TGTTGCTGTTGCGTTGGATG+TGG + chr7_1:11466829-11466848 Msa1009660:intron 50.0%
! GTTGCTGTTGCGTTGGATGT+GGG + chr7_1:11466830-11466849 Msa1009660:intron 50.0%
TGGATGTGGGTCAGACTAGA+CGG + chr7_1:11466843-11466862 Msa1009660:intron 50.0%
GAATCGTCCAATGCCATCCT+TGG + chr7_1:11467473-11467492 Msa1009660:intron 50.0%
TTTCGACTACCAAAGCCAGC+AGG - chr7_1:11465424-11465443 None:intergenic 50.0%
TGGGTTCGTTACCATTCTGC+AGG + chr7_1:11468130-11468149 Msa1009660:intron 50.0%
GCAAGGGATGCTCAAAGATC+AGG + chr7_1:11468252-11468271 Msa1009660:CDS 50.0%
GAGTCCTCCCCTATTACTTC+AGG + chr7_1:11468584-11468603 Msa1009660:CDS 50.0%
GGAGCCACGTCTCAAAATGT+TGG + chr7_1:11469371-11469390 Msa1009660:CDS 50.0%
TGGTTCCCTGTTTGGATCCT+AGG + chr7_1:11470985-11471004 Msa1009660:intron 50.0%
GAGTCACTTGCACGACTTGA+GGG - chr7_1:11471141-11471160 None:intergenic 50.0%
! TCAGCAACCATCGACTGCAA+GGG + chr7_1:11471242-11471261 Msa1009660:CDS 50.0%
CATGCTTCCTTCTTCACCAC+AGG + chr7_1:11471386-11471405 Msa1009660:CDS 50.0%
AGAGAAGTGGTTGGGTGAGA+GGG + chr7_1:11471951-11471970 Msa1009660:intron 50.0%
! TATGGTTCAGGCACTGCTTG+AGG + chr7_1:11472279-11472298 Msa1009660:intron 50.0%
TTCCTGTCCAGATGATCCAC+TGG - chr7_1:11472314-11472333 None:intergenic 50.0%
GCTGAGACCCGACATATTGA+TGG - chr7_1:11472409-11472428 None:intergenic 50.0%
! TCTGATATGGAGGCATGTCC+AGG + chr7_1:11472523-11472542 Msa1009660:intron 50.0%
! ATATGGAGGCATGTCCAGGA+TGG + chr7_1:11472527-11472546 Msa1009660:intron 50.0%
TTCTTAATGCGCAGGCTTGG+AGG + chr7_1:11472797-11472816 Msa1009660:intron 50.0%
TCTTAATGCGCAGGCTTGGA+GGG + chr7_1:11472798-11472817 Msa1009660:intron 50.0%
AAACTCCAGGGACTCCAGTA+CGG - chr7_1:11472844-11472863 None:intergenic 50.0%
AGACGGGATCTTGTGCAAAG+TGG + chr7_1:11472936-11472955 Msa1009660:intron 50.0%
TGGTTGCCTGAACTCAAGAC+TGG + chr7_1:11473246-11473265 Msa1009660:intron 50.0%
TTCTGCAGCTTGATGAGTGG+TGG + chr7_1:11473547-11473566 Msa1009660:intron 50.0%
TCTGCAGCTTGATGAGTGGT+GGG + chr7_1:11473548-11473567 Msa1009660:intron 50.0%
!! TGCGCACTGGTTTGAACTGT+TGG + chr7_1:11474130-11474149 Msa1009660:three_prime_UTR 50.0%
GGCTTAGTCGCTTCTTGGAC+CGG + chr7_1:11463499-11463518 Msa1009660:five_prime_UTR 55.0%
TCGCTTCTTGGACCGGATAC+CGG + chr7_1:11463506-11463525 Msa1009660:five_prime_UTR 55.0%
GAGGCTCTGTATCCGGTATC+CGG - chr7_1:11463521-11463540 None:intergenic 55.0%
! TCGAGTATCGCTTCCGGTGA+CGG - chr7_1:11463660-11463679 None:intergenic 55.0%
CACCGGAAGCGATACTCGAA+TGG + chr7_1:11463661-11463680 Msa1009660:CDS 55.0%
TCCATCCGAAAGATCTGCCG+TGG + chr7_1:11463765-11463784 Msa1009660:CDS 55.0%
CCATCCGAAAGATCTGCCGT+GGG + chr7_1:11463766-11463785 Msa1009660:CDS 55.0%
CTGCCGTGGGAACATGATTC+CGG + chr7_1:11463779-11463798 Msa1009660:CDS 55.0%
CCTCGTAACGCGTGCGAAAT+CGG + chr7_1:11463812-11463831 Msa1009660:CDS 55.0%
GCGTGCGAAATCGGAGAAGA+CGG + chr7_1:11463821-11463840 Msa1009660:CDS 55.0%
CGAAATCGGAGAAGACGGTG+AGG + chr7_1:11463826-11463845 Msa1009660:CDS 55.0%
AGACGGTGAGGAATGTGAGG+AGG + chr7_1:11463838-11463857 Msa1009660:CDS 55.0%
GAAGGAGAAGAGAGAAGGGG+AGG + chr7_1:11463902-11463921 Msa1009660:CDS 55.0%
GAAGAGAGAAGGGGAGGAAG+TGG + chr7_1:11463908-11463927 Msa1009660:CDS 55.0%
GGAAGTGGAGGTTGCGTTGA+TGG + chr7_1:11463923-11463942 Msa1009660:CDS 55.0%
! TGGAGGTTGCGTTGATGGAG+AGG + chr7_1:11463928-11463947 Msa1009660:CDS 55.0%
! GGAGGTTGCGTTGATGGAGA+GGG + chr7_1:11463929-11463948 Msa1009660:CDS 55.0%
! TGCGTTGATGGAGAGGGATG+CGG + chr7_1:11463935-11463954 Msa1009660:CDS 55.0%
CGAGGATGCTTGAGGTTTCG+AGG + chr7_1:11464018-11464037 Msa1009660:CDS 55.0%
TTTCGAGGGAAGAAGCGGAG+AGG + chr7_1:11464033-11464052 Msa1009660:CDS 55.0%
TCGGACAGTGGTAAGACTGG+CGG + chr7_1:11464286-11464305 Msa1009660:intron 55.0%
GAGGGGAGCCAAATCACTAG+AGG + chr7_1:11464551-11464570 Msa1009660:intron 55.0%
GAATCGTCCAATGCCATCCC+TGG + chr7_1:11465018-11465037 Msa1009660:intron 55.0%
CCGAGATGTGTCAGTGTCAC+CGG - chr7_1:11465312-11465331 None:intergenic 55.0%
CCGGTGACACTGACACATCT+CGG + chr7_1:11465309-11465328 Msa1009660:intron 55.0%
GGCTTAGTCGCTTCTTGGAC+CGG + chr7_1:11463499-11463518 Msa1009660:five_prime_UTR 55.0%
TCGCTTCTTGGACCGGATAC+CGG + chr7_1:11463506-11463525 Msa1009660:five_prime_UTR 55.0%
! CTCAGTGACTCGGCTGAGTT+AGG - chr7_1:11465980-11465999 None:intergenic 55.0%
! TCGAGTATCGCTTCCGGTGA+CGG - chr7_1:11463660-11463679 None:intergenic 55.0%
CACCGGAAGCGATACTCGAA+TGG + chr7_1:11463661-11463680 Msa1009660:CDS 55.0%
CTGCCGTGGGAACATGATTC+CGG + chr7_1:11463779-11463798 Msa1009660:CDS 55.0%
CCTCGTAACGCGTGCGAAAT+CGG + chr7_1:11463812-11463831 Msa1009660:CDS 55.0%
GCGTGCGAAATCGGAGAAGA+CGG + chr7_1:11463821-11463840 Msa1009660:CDS 55.0%
GAAGGAGAAGAGAGAAGGGG+AGG + chr7_1:11463902-11463921 Msa1009660:CDS 55.0%
GAAGAGAGAAGGGGAGGAAG+TGG + chr7_1:11463908-11463927 Msa1009660:CDS 55.0%
GGAAGTGGAGGTTGCGTTGA+TGG + chr7_1:11463923-11463942 Msa1009660:CDS 55.0%
! TGGAGGTTGCGTTGATGGAG+AGG + chr7_1:11463928-11463947 Msa1009660:CDS 55.0%
! GGAGGTTGCGTTGATGGAGA+GGG + chr7_1:11463929-11463948 Msa1009660:CDS 55.0%
! TGCGTTGATGGAGAGGGATG+CGG + chr7_1:11463935-11463954 Msa1009660:CDS 55.0%
CGGTGAAGAAGGAGGTTGAG+AGG + chr7_1:11466346-11466365 Msa1009660:CDS 55.0%
TTTCGAGGGAAGAAGCGGAG+AGG + chr7_1:11464033-11464052 Msa1009660:CDS 55.0%
TCGGACAGTGGTAAGACTGG+CGG + chr7_1:11464286-11464305 Msa1009660:intron 55.0%
!! GTACGAGACAGAGTGTTGGG+CGG + chr7_1:11466761-11466780 Msa1009660:intron 55.0%
GGATGTGGGTCAGACTAGAC+GGG + chr7_1:11466844-11466863 Msa1009660:intron 55.0%
CCGAGATGTGTCAGTGTCAC+CGG - chr7_1:11465312-11465331 None:intergenic 55.0%
CCGGTGACACTGACACATCT+CGG + chr7_1:11465309-11465328 Msa1009660:intron 55.0%
GGATGCTCAAAGATCAGGCG+TGG + chr7_1:11468257-11468276 Msa1009660:CDS 55.0%
ACGCCACTTCCTTCGTAAGC+AGG - chr7_1:11468468-11468487 None:intergenic 55.0%
AGCTTCGCTGCTTCTGCTTG+AGG - chr7_1:11468501-11468520 None:intergenic 55.0%
TCAAGCAGAAGCAGCGAAGC+TGG + chr7_1:11468500-11468519 Msa1009660:CDS 55.0%
CAAGCAGAAGCAGCGAAGCT+GGG + chr7_1:11468501-11468520 Msa1009660:CDS 55.0%
AAGCAGAAGCAGCGAAGCTG+GGG + chr7_1:11468502-11468521 Msa1009660:CDS 55.0%
! TGATGGGCAGATTCCGGATG+AGG + chr7_1:11468533-11468552 Msa1009660:CDS 55.0%
GGGCTGATGCAGAGATCTTG+AGG + chr7_1:11468673-11468692 Msa1009660:CDS 55.0%
AGGAGAGCTTCCGTCAGAAG+AGG - chr7_1:11469062-11469081 None:intergenic 55.0%
CTGTTCCTACCGGGCCTTAA+TGG + chr7_1:11471106-11471125 Msa1009660:intron 55.0%
GAACACCATTAAGGCCCGGT+AGG - chr7_1:11471114-11471133 None:intergenic 55.0%
GGAGTCACTTGCACGACTTG+AGG - chr7_1:11471142-11471161 None:intergenic 55.0%
! GTCAGCAACCATCGACTGCA+AGG + chr7_1:11471241-11471260 Msa1009660:CDS 55.0%
GCATACTCCCTTGCAGTCGA+TGG - chr7_1:11471252-11471271 None:intergenic 55.0%
! GAAGCTCGGTGAGTTTGAGC+TGG + chr7_1:11471855-11471874 Msa1009660:intron 55.0%
CGGTGAGTTTGAGCTGGCTA+AGG + chr7_1:11471861-11471880 Msa1009660:intron 55.0%
GAGAGAAGTGGTTGGGTGAG+AGG + chr7_1:11471950-11471969 Msa1009660:intron 55.0%
AAGTGGTTGGGTGAGAGGGT+TGG + chr7_1:11471955-11471974 Msa1009660:intron 55.0%
AGTGGTTGGGTGAGAGGGTT+GGG + chr7_1:11471956-11471975 Msa1009660:intron 55.0%
AGATGATCCACTGGACCCGA+TGG - chr7_1:11472305-11472324 None:intergenic 55.0%
ATCGGGTCCAGTGGATCATC+TGG + chr7_1:11472304-11472323 Msa1009660:CDS 55.0%
GTCCAGTGGATCATCTGGAC+AGG + chr7_1:11472309-11472328 Msa1009660:CDS 55.0%
GCTGCACTTCAGTATGCTGC+TGG + chr7_1:11472427-11472446 Msa1009660:CDS 55.0%
GCACTTCAGTATGCTGCTGG+TGG + chr7_1:11472430-11472449 Msa1009660:CDS 55.0%
!! ATAGGGGTGGACTGTGCACT+AGG - chr7_1:11472495-11472514 None:intergenic 55.0%
! TGCTGGTCTAGCATCCGTAC+TGG + chr7_1:11472827-11472846 Msa1009660:intron 55.0%
! TGATGAGTGGTGGGAGCAAC+CGG + chr7_1:11473557-11473576 Msa1009660:CDS 55.0%
TCGACTGGGTGACAGTGGAT+GGG + chr7_1:11473592-11473611 Msa1009660:CDS 55.0%
! ATGCGATTTTCCTCCGGCGC+CGG - chr7_1:11463730-11463749 None:intergenic 60.0%
CCCACGGCAGATCTTTCGGA+TGG - chr7_1:11463769-11463788 None:intergenic 60.0%
CCGATTTCGCACGCGTTACG+AGG - chr7_1:11463815-11463834 None:intergenic 60.0%
ACGGTTCACGGTGAAGGGGA+TGG + chr7_1:11463867-11463886 Msa1009660:CDS 60.0%
GTTCACGGTGAAGGGGATGG+TGG + chr7_1:11463870-11463889 Msa1009660:CDS 60.0%
! ACGGTGAAGGGGATGGTGGT+GGG + chr7_1:11463874-11463893 Msa1009660:CDS 60.0%
!! GGATGGTGGTGGGAGGAAGA+AGG + chr7_1:11463884-11463903 Msa1009660:CDS 60.0%
GAGAGAAGGGGAGGAAGTGG+AGG + chr7_1:11463911-11463930 Msa1009660:CDS 60.0%
GGAGAGGGATGCGGTGAAGA+AGG + chr7_1:11463944-11463963 Msa1009660:CDS 60.0%
GAGGGATGCGGTGAAGAAGG+AGG + chr7_1:11463947-11463966 Msa1009660:CDS 60.0%
GGGAAGAAGCGGAGAGGAAG+AGG + chr7_1:11464039-11464058 Msa1009660:CDS 60.0%
GACAGTGGTAAGACTGGCGG+TGG + chr7_1:11464289-11464308 Msa1009660:intron 60.0%
! ATGCGATTTTCCTCCGGCGC+CGG - chr7_1:11463730-11463749 None:intergenic 60.0%
CCGATTTCGCACGCGTTACG+AGG - chr7_1:11463815-11463834 None:intergenic 60.0%
ACGGTTCACGGTGAAGGGGA+TGG + chr7_1:11463867-11463886 Msa1009660:CDS 60.0%
GTTCACGGTGAAGGGGATGG+TGG + chr7_1:11463870-11463889 Msa1009660:CDS 60.0%
! ACGGTGAAGGGGATGGTGGT+GGG + chr7_1:11463874-11463893 Msa1009660:CDS 60.0%
!! GGATGGTGGTGGGAGGAAGA+AGG + chr7_1:11463884-11463903 Msa1009660:CDS 60.0%
GAGAGAAGGGGAGGAAGTGG+AGG + chr7_1:11463911-11463930 Msa1009660:CDS 60.0%
GGAGAGGGATGCGGTGAAGA+AGG + chr7_1:11463944-11463963 Msa1009660:CDS 60.0%
GAGGGATGCGGTGAAGAAGG+AGG + chr7_1:11463947-11463966 Msa1009660:CDS 60.0%
GGGAAGAAGCGGAGAGGAAG+AGG + chr7_1:11464039-11464058 Msa1009660:CDS 60.0%
GTGAGAGGGTTGGGAGTGAG+AGG + chr7_1:11471965-11471984 Msa1009660:intron 60.0%
! CAGGCACTGCTTGAGGCCAT+CGG + chr7_1:11472286-11472305 Msa1009660:intron 60.0%
! AGGCACTGCTTGAGGCCATC+GGG + chr7_1:11472287-11472306 Msa1009660:intron 60.0%
TGACAGCAAGAGCCGGTGCT+CGG + chr7_1:11472368-11472387 Msa1009660:CDS 60.0%
GGCTTGGAGGGTTCAGATGC+TGG + chr7_1:11472810-11472829 Msa1009660:intron 60.0%
AGCATCCGTACTGGAGTCCC+TGG + chr7_1:11472836-11472855 Msa1009660:intron 60.0%
CAGTCGACAACCGTCGATGC+CGG - chr7_1:11473579-11473598 None:intergenic 60.0%
!! GGCATCGACGGTTGTCGACT+GGG + chr7_1:11473578-11473597 Msa1009660:CDS 60.0%
! GGTTGTCGACTGGGTGACAG+TGG + chr7_1:11473587-11473606 Msa1009660:CDS 60.0%
GTCGACTGGGTGACAGTGGA+TGG + chr7_1:11473591-11473610 Msa1009660:CDS 60.0%
! CACGGTGAAGGGGATGGTGG+TGG + chr7_1:11463873-11463892 Msa1009660:CDS 65.0%
!! GTGAAGGGGATGGTGGTGGG+AGG + chr7_1:11463877-11463896 Msa1009660:CDS 65.0%
! CACGGTGAAGGGGATGGTGG+TGG + chr7_1:11463873-11463892 Msa1009660:CDS 65.0%
!! GTGAAGGGGATGGTGGTGGG+AGG + chr7_1:11463877-11463896 Msa1009660:CDS 65.0%
CTTGGGGCTGATGTGCCTCC+AGG + chr7_1:11469112-11469131 Msa1009660:CDS 65.0%
CTTGAGGCCATCGGGTCCAG+TGG + chr7_1:11472295-11472314 Msa1009660:CDS 65.0%
GACAGCAAGAGCCGGTGCTC+GGG + chr7_1:11472369-11472388 Msa1009660:CDS 65.0%
! GTGGGAGCAACCGGCATCGA+CGG + chr7_1:11473566-11473585 Msa1009660:CDS 65.0%
!! CGGCATCGACGGTTGTCGAC+TGG + chr7_1:11473577-11473596 Msa1009660:CDS 65.0%
CCACTCGGCCAATACGCCGC+CGG + chr7_1:11463708-11463727 Msa1009660:CDS 70.0%
!! CGATTTTCCTCCGGCGCCGG+CGG - chr7_1:11463727-11463746 None:intergenic 70.0%
CCACTCGGCCAATACGCCGC+CGG + chr7_1:11463708-11463727 Msa1009660:CDS 70.0%
!! CGATTTTCCTCCGGCGCCGG+CGG - chr7_1:11463727-11463746 None:intergenic 70.0%
GGGGCTGATGTGCCTCCAGG+AGG + chr7_1:11469115-11469134 Msa1009660:CDS 70.0%
AGCCGGTGCTCGGGATCCGT+CGG + chr7_1:11472378-11472397 Msa1009660:CDS 70.0%
TGCCGACGGATCCCGAGCAC+CGG - chr7_1:11472383-11472402 None:intergenic 70.0%
! CCGGCGGCGTATTGGCCGAG+TGG - chr7_1:11463711-11463730 None:intergenic 75.0%
! CCGGCGGCGTATTGGCCGAG+TGG - chr7_1:11463711-11463730 None:intergenic 75.0%
! GGCCAATACGCCGCCGGCGC+CGG + chr7_1:11463714-11463733 Msa1009660:CDS 80.0%
!!! CTCCGGCGCCGGCGGCGTAT+TGG - chr7_1:11463719-11463738 None:intergenic 80.0%
!! CAATACGCCGCCGGCGCCGG+AGG + chr7_1:11463717-11463736 Msa1009660:CDS 80.0%
! GGCCAATACGCCGCCGGCGC+CGG + chr7_1:11463714-11463733 Msa1009660:CDS 80.0%
!!! CTCCGGCGCCGGCGGCGTAT+TGG - chr7_1:11463719-11463738 None:intergenic 80.0%
!! CAATACGCCGCCGGCGCCGG+AGG + chr7_1:11463717-11463736 Msa1009660:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 11463305 11474278 11463305 ID=Msa1009660;Name=Msa1009660
chr7_1 mRNA 11463305 11474278 11463305 ID=Msa1009660-mRNA-1;Parent=Msa1009660;Name=Msa1009660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=334|0.62|0.77|1|0.87|0.88|9|592|833
chr7_1 exon 11463305 11464087 11463305 ID=Msa1009660-mRNA-1:exon:3043;Parent=Msa1009660-mRNA-1
chr7_1 exon 11465987 11466478 11465987 ID=Msa1009660-mRNA-1:exon:3044;Parent=Msa1009660-mRNA-1
chr7_1 exon 11468152 11468694 11468152 ID=Msa1009660-mRNA-1:exon:3045;Parent=Msa1009660-mRNA-1
chr7_1 exon 11469024 11469165 11469024 ID=Msa1009660-mRNA-1:exon:3046;Parent=Msa1009660-mRNA-1
chr7_1 exon 11469245 11469412 11469245 ID=Msa1009660-mRNA-1:exon:3047;Parent=Msa1009660-mRNA-1
chr7_1 exon 11470697 11470906 11470697 ID=Msa1009660-mRNA-1:exon:3048;Parent=Msa1009660-mRNA-1
chr7_1 exon 11471222 11471407 11471222 ID=Msa1009660-mRNA-1:exon:3049;Parent=Msa1009660-mRNA-1
chr7_1 exon 11472289 11472468 11472289 ID=Msa1009660-mRNA-1:exon:3050;Parent=Msa1009660-mRNA-1
chr7_1 exon 11473555 11474278 11473555 ID=Msa1009660-mRNA-1:exon:3051;Parent=Msa1009660-mRNA-1
chr7_1 five_prime_UTR 11463305 11463638 11463305 ID=Msa1009660-mRNA-1:five_prime_utr;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11463639 11464087 11463639 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11465987 11466478 11465987 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11468152 11468694 11468152 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11469024 11469165 11469024 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11469245 11469412 11469245 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11470697 11470906 11470697 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11471222 11471407 11471222 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11472289 11472468 11472289 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 CDS 11473555 11473686 11473555 ID=Msa1009660-mRNA-1:cds;Parent=Msa1009660-mRNA-1
chr7_1 three_prime_UTR 11473687 11474278 11473687 ID=Msa1009660-mRNA-1:three_prime_utr;Parent=Msa1009660-mRNA-1
Gene Sequence

>Msa1009660

ATGCAACAATCTTCATCTCCGTCACCGGAAGCGATACTCGAATGGCTTCACAAAGAAATGGGATACAGACCACTCGGCCAATACGCCGCCGGCGCCGGAGGAAAATCGCATTCACCGTCAGTCGAATCCATCCGAAAGATCTGCCGTGGGAACATGATTCCGGTATGGAATTTCCTCGTAACGCGTGCGAAATCGGAGAAGACGGTGAGGAATGTGAGGAGGAATATTACGGTTCACGGTGAAGGGGATGGTGGTGGGAGGAAGAAGGAGAAGAGAGAAGGGGAGGAAGTGGAGGTTGCGTTGATGGAGAGGGATGCGGTGAAGAAGGAGGTTGATAGATTGAGGAATGTTGTGAGGAGACAGAGGAAGGATTTGAAAGCGAGGATGCTTGAGGTTTCGAGGGAAGAAGCGGAGAGGAAGAGGATGCTTGATGAACGGGCGAATTACAGCCGAGTCACTGAGTTAAACTCGTCGAGTGTTATCATATCAACAATGCAACAATCTTCATCGCCGTCACCGGAAGCGATACTCGAATGGCTTCACAAAGAAATGGGATACAGACCACTCGGCCAATACGCCGCCGGCGCCGGAGGAAAATCGCATTCACCGTCAGTCGAATCGATTCGCAAAATCTGCCGTGGGAACATGATTCCGGTATGGAATTTCCTCGTAACGCGTGCGAAATCGGAGAAGACGGTGAGAAATGTGAGGAGGAATATTACGGTTCACGGTGAAGGGGATGGTGGTGGGAGGAAGAAGGAGAAGAGAGAAGGGGAGGAAGTGGAGGTTGCGTTGATGGAGAGGGATGCGGTGAAGAAGGAGGTTGAGAGGTTGAGGAATGTTGTGAGGAGACAGAGGAAGGATTTGAAAGCGAGAATGCTTGAAGTTTCGAGGGAAGAAGCGGAGAGGAAGAGGATGCTTGATGAACGGGCGAATTACAGGCATAAGCAAGTGATGTTGGAGGCCTATGACCGCCAATGTGATGAAGCTTCGAGAATATTTGCTGAATACCATAAACGTCTCTGTTACTATATAAATCAAGCAAGGGATGCTCAAAGATCAGGCGTGGATTCTTCCGTTGAAATGGTAAATAGTTTTAGTGCAAAAAATGAGAAGGAAGCTGTTTATTCTACTGTTAAGGGCAGTAAATCTTCAGATGATGTCATTGTCATTGAAACCACGAGGGAAAAGAATATTAGAAAGGCGTGTGAATCTCTTGTAGCTTACATGGTTGAGAAAATACAAAGTTCTTTTCCTGCTTACGAAGGAAGTGGCGTTCTAGCAAATCCTCAAGCAGAAGCAGCGAAGCTGGGGTTTGATTTTGATGGGCAGATTCCGGATGAGGTTAGAACAGTTATTGTGAATTGCCTAAAGAGTCCTCCCCTATTACTTCAGGCAATTACTGCATACACTTCTCACTTGAAAGGTCTAATATCCAGAGAAATAGAGAAAATTGATGTTAGGGCTGATGCAGAGATCTTGAGGTACAAATATGAAAATAACATAGTTATGGATGTTTCCTCTTCTGACGGAAGCTCTCCTCTACAGTATCCACTTTATGGAAATGGAAAACTTGGGGCTGATGTGCCTCCAGGAGGAAGTCAAAATCAGCTCCTTGAAAGACAGAAAGCTCATGTTCAGCAGTTTTTGGCTACTGAAGATGCACTAAACAATGCTGCAGAAGCAAGGGACTTGTGTGAAAAACTTATGAAACGTCTGCATGGAGGCACCGATGTTACTTCTCGTTCAATTGGAGCCACGTCTCAAAATGTTGGAAGTCTTAGACAACTTCAGCTAGATGTTTGGGCAAAGGAAAGAGAAGTTGCTGGTTTAAAGGCAAGTTTAAACACCTTGATGTCTGAAATACAACGCTTGAATAAGTTATGTGCCGAGAGGAAAGAAGCCGAAGATTCTCTGAAAAAAAAGTGGAAAAAGATTGAAGAGTTTGATGGTCGTAGATCAGAGCTTGAGTCCATATACACCGCACTTCTTAAAGCAAATACGGATGCTGCTTCATTTTGGAGTCAGCAACCATCGACTGCAAGGGAGTATGCTTTAAGCACTATAATTCCAGCATGTTCTGCTGTTGTTGAGACTTCAAATAGTGCAAAGGATCTTATTGAGAAAGAAGTGTCTGCTTTTTATCGGAGTCCAGATAATAGCCTCTACATGCTTCCTTCTTCACCACAGGCACTGCTTGAGGCCATCGGGTCCAGTGGATCATCTGGACAGGAAGCAGTTGCCAATGCAGAAATAAGTGCGGCTATTTTGACAGCAAGAGCCGGTGCTCGGGATCCGTCGGCAATTCCATCAATATGTCGGGTCTCAGCTGCACTTCAGTATGCTGCTGGTGGTGAGTATACTATTATTCTTGATGAGTGGTGGGAGCAACCGGCATCGACGGTTGTCGACTGGGTGACAGTGGATGGGCAAAATGTAGCTGCCTATTATAATCATGTGAAAAAGCTTCTAACATGTTATGATCAGGAGCTACTATTGTGA
Protein sequence

>Msa1009660

MQQSSSPSPEAILEWLHKEMGYRPLGQYAAGAGGKSHSPSVESIRKICRGNMIPVWNFLVTRAKSEKTVRNVRRNITVHGEGDGGGRKKEKREGEEVEVALMERDAVKKEVDRLRNVVRRQRKDLKARMLEVSREEAERKRMLDERANYSRVTELNSSSVIISTMQQSSSPSPEAILEWLHKEMGYRPLGQYAAGAGGKSHSPSVESIRKICRGNMIPVWNFLVTRAKSEKTVRNVRRNITVHGEGDGGGRKKEKREGEEVEVALMERDAVKKEVERLRNVVRRQRKDLKARMLEVSREEAERKRMLDERANYRHKQVMLEAYDRQCDEASRIFAEYHKRLCYYINQARDAQRSGVDSSVEMVNSFSAKNEKEAVYSTVKGSKSSDDVIVIETTREKNIRKACESLVAYMVEKIQSSFPAYEGSGVLANPQAEAAKLGFDFDGQIPDEVRTVIVNCLKSPPLLLQAITAYTSHLKGLISREIEKIDVRADAEILRYKYENNIVMDVSSSDGSSPLQYPLYGNGKLGADVPPGGSQNQLLERQKAHVQQFLATEDALNNAAEARDLCEKLMKRLHGGTDVTSRSIGATSQNVGSLRQLQLDVWAKEREVAGLKASLNTLMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDGRRSELESIYTALLKANTDAASFWSQQPSTAREYALSTIIPACSAVVETSNSAKDLIEKEVSAFYRSPDNSLYMLPSSPQALLEAIGSSGSSGQEAVANAEISAAILTARAGARDPSAIPSICRVSAALQYAAGGEYTIILDEWWEQPASTVVDWVTVDGQNVAAYYNHVKKLLTCYDQELLL*