Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167380 | XP_013450083.1 | 94.030 | 268 | 10 | 1 | 1 | 268 | 1 | 262 | 0.0 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167380 | I3T4K4 | 94.030 | 268 | 10 | 1 | 1 | 268 | 1 | 262 | 0.0 | 511 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025330 | Msa1167380 | 0.818159 | 2.266892e-52 | -8.615850e-47 |
| Msa0045790 | Msa1167380 | 0.801856 | 7.392013e-49 | -8.615850e-47 |
| Msa0046160 | Msa1167380 | 0.801547 | 8.552544e-49 | -8.615850e-47 |
| Msa0662340 | Msa1167380 | 0.823006 | 1.746915e-53 | -8.615850e-47 |
| Msa0699280 | Msa1167380 | 0.807905 | 4.023387e-50 | -8.615850e-47 |
| Msa0736960 | Msa1167380 | 0.812181 | 4.825158e-51 | -8.615850e-47 |
| Msa0737570 | Msa1167380 | 0.806882 | 6.627348e-50 | -8.615850e-47 |
| Msa0767300 | Msa1167380 | 0.821228 | 4.513485e-53 | -8.615850e-47 |
| Msa0121090 | Msa1167380 | 0.814128 | 1.803416e-51 | -8.615850e-47 |
| Msa0131900 | Msa1167380 | 0.812716 | 3.685809e-51 | -8.615850e-47 |
| Msa0160130 | Msa1167380 | 0.816577 | 5.148215e-52 | -8.615850e-47 |
| Msa0221000 | Msa1167380 | 0.802989 | 4.317143e-49 | -8.615850e-47 |
| Msa0378720 | Msa1167380 | 0.826225 | 3.049020e-54 | -8.615850e-47 |
| Msa0440440 | Msa1167380 | 0.814517 | 1.479814e-51 | -8.615850e-47 |
| Msa0464680 | Msa1167380 | 0.800474 | 1.417330e-48 | -8.615850e-47 |
| Msa0474730 | Msa1167380 | 0.804741 | 1.867829e-49 | -8.615850e-47 |
| Msa1004840 | Msa1167380 | 0.801932 | 7.130275e-49 | -8.615850e-47 |
| Msa1035960 | Msa1167380 | 0.826966 | 2.029684e-54 | -8.615850e-47 |
| Msa1076700 | Msa1167380 | 0.802731 | 4.882304e-49 | -8.615850e-47 |
| Msa1080060 | Msa1167380 | 0.942354 | 8.340435e-102 | -8.615850e-47 |
| Msa0266350 | Msa1167380 | 0.813030 | 3.146141e-51 | -8.615850e-47 |
| Msa0300270 | Msa1167380 | 0.807694 | 4.460210e-50 | -8.615850e-47 |
| Msa0337700 | Msa1167380 | 0.821052 | 4.957141e-53 | -8.615850e-47 |
| Msa0358890 | Msa1167380 | 0.801186 | 1.013740e-48 | -8.615850e-47 |
| Msa1113800 | Msa1167380 | 0.803363 | 3.613546e-49 | -8.615850e-47 |
| Msa1167380 | Msa1228200 | 0.803371 | 3.599963e-49 | -8.615850e-47 |
| Msa1167380 | Msa1277220 | 0.807132 | 5.869105e-50 | -8.615850e-47 |
| Msa1167380 | Msa1297230 | 0.820738 | 5.851597e-53 | -8.615850e-47 |
| Msa1167380 | Msa1314650 | 0.804814 | 1.803073e-49 | -8.615850e-47 |
| Msa1167380 | Msa1315590 | 0.819928 | 8.976643e-53 | -8.615850e-47 |
| Msa1167380 | Msa1320410 | 0.800828 | 1.200214e-48 | -8.615850e-47 |
| Msa1167380 | Msa1330420 | 0.805337 | 1.401661e-49 | -8.615850e-47 |
| Msa1167380 | Msa1398540 | 0.800473 | 1.417700e-48 | -8.615850e-47 |
| Msa1167380 | Msa1423100 | 0.866706 | 2.343840e-65 | -8.615850e-47 |
| Msa1167380 | Msa1433810 | 0.835111 | 2.029211e-56 | -8.615850e-47 |
| Msa1167380 | Msa1440560 | 0.806470 | 8.098386e-50 | -8.615850e-47 |
| Msa1167380 | Msa1464810 | 0.807428 | 5.079507e-50 | -8.615850e-47 |
| Msa0498060 | Msa1167380 | 0.800318 | 1.524531e-48 | -8.615850e-47 |
| Msa0856920 | Msa1167380 | 0.801374 | 9.278146e-49 | -8.615850e-47 |
| Msa0866520 | Msa1167380 | 0.808744 | 2.664066e-50 | -8.615850e-47 |
| Msa0875290 | Msa1167380 | 0.818015 | 2.442983e-52 | -8.615850e-47 |
| Msa0880950 | Msa1167380 | 0.802923 | 4.454698e-49 | -8.615850e-47 |
| Msa0898750 | Msa1167380 | 0.803787 | 2.950090e-49 | -8.615850e-47 |
| Msa0923010 | Msa1167380 | 0.818840 | 1.588510e-52 | -8.615850e-47 |
| Msa0936220 | Msa1167380 | 0.800100 | 1.688871e-48 | -8.615850e-47 |
| Msa0964310 | Msa1167380 | 0.812918 | 3.328417e-51 | -8.615850e-47 |
| Msa0968880 | Msa1167380 | 0.888197 | 7.311441e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167380 | MtrunA17_Chr7g0265691 | 94.030 | 268 | 10 | 1 | 1 | 268 | 1 | 262 | 0.0 | 511 |
| Msa1167380 | MtrunA17_Chr7g0265701 | 83.333 | 252 | 41 | 1 | 13 | 264 | 1 | 251 | 2.82e-154 | 430 |
| Msa1167380 | MtrunA17_Chr7g0265581 | 71.204 | 191 | 52 | 3 | 72 | 260 | 18 | 207 | 1.13e-94 | 278 |
| Msa1167380 | MtrunA17_Chr7g0255231 | 70.068 | 147 | 32 | 5 | 57 | 193 | 76 | 220 | 3.26e-61 | 193 |
| Msa1167380 | MtrunA17_Chr7g0219531 | 40.426 | 235 | 127 | 4 | 39 | 266 | 32 | 260 | 5.50e-57 | 183 |
| Msa1167380 | MtrunA17_Chr7g0219541 | 40.179 | 224 | 123 | 4 | 48 | 266 | 49 | 266 | 1.98e-54 | 177 |
| Msa1167380 | MtrunA17_Chr2g0308461 | 39.381 | 226 | 129 | 3 | 48 | 268 | 281 | 503 | 1.91e-50 | 173 |
| Msa1167380 | MtrunA17_Chr7g0219551 | 38.559 | 236 | 131 | 5 | 34 | 264 | 78 | 304 | 7.38e-48 | 161 |
| Msa1167380 | MtrunA17_Chr7g0219521 | 40.741 | 189 | 104 | 3 | 33 | 214 | 28 | 215 | 6.20e-43 | 145 |
| Msa1167380 | MtrunA17_Chr7g0265681 | 79.592 | 49 | 10 | 0 | 88 | 136 | 25 | 73 | 4.41e-23 | 90.5 |
| Msa1167380 | MtrunA17_Chr7g0265671 | 64.583 | 48 | 17 | 0 | 213 | 260 | 51 | 98 | 3.78e-19 | 80.5 |
| Msa1167380 | MtrunA17_Chr7g0265671 | 72.917 | 48 | 10 | 2 | 97 | 141 | 1 | 48 | 3.27e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167380 | AT2G36540.1 | 48.462 | 260 | 111 | 6 | 14 | 265 | 5 | 249 | 1.23e-65 | 205 |
| Msa1167380 | AT3G29760.5 | 41.500 | 200 | 107 | 3 | 66 | 260 | 321 | 515 | 7.29e-46 | 161 |
| Msa1167380 | AT3G29760.3 | 41.500 | 200 | 107 | 3 | 66 | 260 | 321 | 515 | 7.29e-46 | 161 |
| Msa1167380 | AT2G36550.1 | 51.145 | 131 | 60 | 2 | 135 | 265 | 15 | 141 | 8.79e-44 | 145 |
| Msa1167380 | AT4G26190.2 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.55e-42 | 155 |
| Msa1167380 | AT4G26190.5 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.55e-42 | 155 |
| Msa1167380 | AT4G26190.3 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.55e-42 | 155 |
| Msa1167380 | AT4G26190.1 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.55e-42 | 155 |
| Msa1167380 | AT4G26190.4 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.55e-42 | 155 |
| Msa1167380 | AT3G29760.2 | 36.726 | 226 | 107 | 4 | 66 | 260 | 321 | 541 | 2.30e-40 | 147 |
| Msa1167380 | AT3G29760.1 | 42.105 | 133 | 68 | 2 | 66 | 193 | 321 | 449 | 9.07e-28 | 111 |
| Msa1167380 | AT3G29760.4 | 43.836 | 73 | 37 | 1 | 66 | 138 | 321 | 389 | 1.60e-12 | 67.4 |
Find 71 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTGATTCATTATCTTATT+TGG | 0.131323 | 7_4:-59836729 | Msa1167380:three_prime_UTR |
| TTCATAAATTCTTCACTAAA+TGG | 0.185254 | 7_4:+59837988 | None:intergenic |
| TGATACACTTTGCAAAATTA+TGG | 0.203331 | 7_4:+59838388 | None:intergenic |
| CTCAATTGTTAGCAGTTATA+CGG | 0.218202 | 7_4:+59836930 | None:intergenic |
| AAAACAAGCTACTATTTGTT+TGG | 0.265573 | 7_4:-59837608 | Msa1167380:CDS |
| ATAATAAGCAATTTCTTCTT+AGG | 0.282304 | 7_4:+59838224 | None:intergenic |
| ACAAGTGAATTACCGGATTA+AGG | 0.285626 | 7_4:+59837326 | None:intergenic |
| CAAGGTAAATGTAGAGATTC+TGG | 0.299926 | 7_4:-59837484 | Msa1167380:CDS |
| TTGCTTATTATGAACCTTAA+CGG | 0.337126 | 7_4:-59838212 | Msa1167380:CDS |
| TCAAGAGAAAGACCCAATTC+TGG | 0.351025 | 7_4:+59838263 | None:intergenic |
| CCATGGTTCGAATTTGACTT+TGG | 0.358354 | 7_4:-59836668 | Msa1167380:three_prime_UTR |
| AAACAAGCTACTATTTGTTT+GGG | 0.367088 | 7_4:-59837607 | Msa1167380:intron |
| TTATGTATTATAAGATCATT+TGG | 0.370881 | 7_4:-59836610 | Msa1167380:three_prime_UTR |
| GGTGCTTTAGCCTGTGCTAT+TGG | 0.376162 | 7_4:-59837639 | Msa1167380:CDS |
| CATGGTTCGAATTTGACTTT+GGG | 0.376887 | 7_4:-59836667 | Msa1167380:three_prime_UTR |
| AGATTCTGGCTTTAAATCCT+TGG | 0.379049 | 7_4:-59837470 | Msa1167380:CDS |
| AAGTTCAGCAGAACCAGAAT+TGG | 0.383508 | 7_4:-59838276 | Msa1167380:CDS |
| TGTCAGTGACACGAGCTCTA+TGG | 0.392097 | 7_4:+59838180 | None:intergenic |
| TAATCAGCGGTCCGAGACTT+TGG | 0.398239 | 7_4:+59838146 | None:intergenic |
| TACTTGCATATGTCACCATT+TGG | 0.400960 | 7_4:+59837070 | None:intergenic |
| ATACCCATGTAATGATGGTT+TGG | 0.409691 | 7_4:-59836769 | Msa1167380:three_prime_UTR |
| TTTGCAAAGTGTATCAAGAA+TGG | 0.412015 | 7_4:-59838381 | Msa1167380:exon |
| AAAGTATTTGAAGCAGAATA+TGG | 0.421185 | 7_4:+59837379 | None:intergenic |
| GGAACGAACACGAGAATAGA+AGG | 0.423928 | 7_4:+59836952 | None:intergenic |
| ATACATTTAATTTAGGATCA+AGG | 0.424490 | 7_4:-59837502 | Msa1167380:intron |
| AAAGATTTGAAGTGGGTGTC+TGG | 0.432400 | 7_4:-59837954 | Msa1167380:CDS |
| GGATGAGATGTTGTAATTGC+TGG | 0.437119 | 7_4:+59836983 | None:intergenic |
| ATACAAGTCTTTCCTTAATC+CGG | 0.442145 | 7_4:-59837338 | Msa1167380:intron |
| TTACAACATCTCATCCTGAT+TGG | 0.449737 | 7_4:-59836976 | Msa1167380:CDS |
| GCCTTGTCATCCTTGTCCTC+AGG | 0.462508 | 7_4:+59837196 | None:intergenic |
| CGAGAATAGAAGGCCCAATC+AGG | 0.463741 | 7_4:+59836962 | None:intergenic |
| TACAACATCTCATCCTGATT+GGG | 0.472152 | 7_4:-59836975 | Msa1167380:CDS |
| TGCTTTATAACAAGTGGAAA+AGG | 0.475081 | 7_4:+59838441 | None:intergenic |
| TTTACTTGCTTTATAACAAG+TGG | 0.489937 | 7_4:+59838435 | None:intergenic |
| GCAATTTATTGTAAAATCCA+TGG | 0.492025 | 7_4:-59836685 | Msa1167380:three_prime_UTR |
| GGATTAAGGAAAGACTTGTA+TGG | 0.503951 | 7_4:+59837340 | None:intergenic |
| TATGGAGAAGAAATCCGTTA+AGG | 0.508168 | 7_4:+59838198 | None:intergenic |
| CTGCTTAGAAAGATTTGAAG+TGG | 0.511785 | 7_4:-59837962 | Msa1167380:CDS |
| ATAATTTGAATAGATCCAAA+TGG | 0.511910 | 7_4:-59837085 | Msa1167380:intron |
| GGGTGTCTGGTCTTCTGCAA+TGG | 0.513381 | 7_4:-59837941 | Msa1167380:CDS |
| AGTTCAGCAGAACCAGAATT+GGG | 0.514991 | 7_4:-59838275 | Msa1167380:CDS |
| TTTCGAATCGCCAATAGCAC+AGG | 0.520821 | 7_4:+59837629 | None:intergenic |
| AAATGCAGGCATAATGTTGA+TGG | 0.521362 | 7_4:-59837660 | Msa1167380:intron |
| TCAATTGTTAGCAGTTATAC+GGG | 0.521458 | 7_4:+59836931 | None:intergenic |
| TAATCCAAACCATCATTACA+TGG | 0.521997 | 7_4:+59836765 | None:intergenic |
| TCTCTTGAGAAGCTGAATCT+CGG | 0.522455 | 7_4:-59838248 | Msa1167380:CDS |
| AAAGGTGAAATAAACCGATT+CGG | 0.523055 | 7_4:+59838459 | None:intergenic |
| TGATCATACCCATGTAATGA+TGG | 0.530464 | 7_4:-59836774 | Msa1167380:three_prime_UTR |
| GTGTGGAATACTGTCAAGAA+AGG | 0.534546 | 7_4:-59837406 | Msa1167380:CDS |
| TGCTTAGAAAGATTTGAAGT+GGG | 0.535088 | 7_4:-59837961 | Msa1167380:CDS |
| GGACAAGGATGACAAGGCAC+TGG | 0.535550 | 7_4:-59837191 | Msa1167380:CDS |
| CACTAAAGGGAACACCGAAT+CGG | 0.547540 | 7_4:-59838473 | None:intergenic |
| TCCTCAGGATCATATGACTT+AGG | 0.553713 | 7_4:+59837211 | None:intergenic |
| AGAAAGCAATTCCAAAGTCT+CGG | 0.562617 | 7_4:-59838157 | Msa1167380:CDS |
| TCCTAAGTCATATGATCCTG+AGG | 0.564715 | 7_4:-59837212 | Msa1167380:CDS |
| GACATATGCAAGTACTTGAA+AGG | 0.564755 | 7_4:-59837061 | Msa1167380:CDS |
| AGGCTTCTTATTGTTCTCCA+AGG | 0.569260 | 7_4:+59837453 | None:intergenic |
| GTCATATGATCCTGAGGACA+AGG | 0.573937 | 7_4:-59837206 | Msa1167380:CDS |
| TATGTGAAGGATAATGCTAT+TGG | 0.576186 | 7_4:-59837010 | Msa1167380:CDS |
| GACAAGGATGACAAGGCACT+GGG | 0.585950 | 7_4:-59837190 | Msa1167380:intron |
| TTCAATCTATAAAATGTAGA+CGG | 0.589902 | 7_4:+59836545 | None:intergenic |
| ATTATGTTACAGTTTACAAG+AGG | 0.597781 | 7_4:-59838011 | Msa1167380:intron |
| AATAGCATTATCCTTCACAT+AGG | 0.611395 | 7_4:+59837012 | None:intergenic |
| TCCTGAGGACAAGGATGACA+AGG | 0.614403 | 7_4:-59837197 | Msa1167380:CDS |
| CCAAAGTCAAATTCGAACCA+TGG | 0.623759 | 7_4:+59836668 | None:intergenic |
| AGATGTTCAGTCCTATGTGA+AGG | 0.629750 | 7_4:-59837023 | Msa1167380:CDS |
| TGGAATACTGTCAAGAAAGG+AGG | 0.665630 | 7_4:-59837403 | Msa1167380:CDS |
| AATCCAAACCATCATTACAT+GGG | 0.675720 | 7_4:+59836766 | None:intergenic |
| GTGACGATATTTGTAATCAG+CGG | 0.676232 | 7_4:+59838133 | None:intergenic |
| GCTAACAATTGAGTAAAACA+TGG | 0.686479 | 7_4:-59836920 | Msa1167380:exon |
| TGTTGCATAATGCAATGCAG+TGG | 0.711796 | 7_4:-59836889 | Msa1167380:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | chr7_4:59837140-59837159 | None:intergenic | 10.0% |
| !! | CAAATTTAAAAAGAAAATAA+GGG | + | chr7_4:59837272-59837291 | None:intergenic | 10.0% |
| !! | TCAAATTTAAAAAGAAAATA+AGG | + | chr7_4:59837273-59837292 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | chr7_4:59837140-59837159 | None:intergenic | 10.0% |
| !! | CAAATTTAAAAAGAAAATAA+GGG | + | chr7_4:59837272-59837291 | None:intergenic | 10.0% |
| !! | TCAAATTTAAAAAGAAAATA+AGG | + | chr7_4:59837273-59837292 | None:intergenic | 10.0% |
| !!! | TTGTTTCATACATTTAATTT+AGG | - | chr7_4:59837484-59837503 | Msa1167380:CDS | 15.0% |
| !!! | TCTCTAGAAAAATAAAATAT+AGG | + | chr7_4:59837844-59837863 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTCTAGAGATT+TGG | - | chr7_4:59837846-59837865 | Msa1167380:intron | 15.0% |
| !!! | TCTAAAATTTTCTTTATTGT+TGG | - | chr7_4:59838191-59838210 | Msa1167380:CDS | 15.0% |
| !! | TTATGTATTATAAGATCATT+TGG | - | chr7_4:59838383-59838402 | Msa1167380:exon | 15.0% |
| !!! | TTGTTTCATACATTTAATTT+AGG | - | chr7_4:59837484-59837503 | Msa1167380:CDS | 15.0% |
| !!! | TCTCTAGAAAAATAAAATAT+AGG | + | chr7_4:59837844-59837863 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTCTAGAGATT+TGG | - | chr7_4:59837846-59837865 | Msa1167380:intron | 15.0% |
| !!! | TCTAAAATTTTCTTTATTGT+TGG | - | chr7_4:59838191-59838210 | Msa1167380:CDS | 15.0% |
| !! | TTATGTATTATAAGATCATT+TGG | - | chr7_4:59838383-59838402 | Msa1167380:exon | 15.0% |
| !! | ATAATAAGCAATTTCTTCTT+AGG | + | chr7_4:59836772-59836791 | None:intergenic | 20.0% |
| !! | TATATGTGAGAAACTTATTA+CGG | + | chr7_4:59836891-59836910 | None:intergenic | 20.0% |
| !! | TTCATAAATTCTTCACTAAA+TGG | + | chr7_4:59837008-59837027 | None:intergenic | 20.0% |
| !! | ATGAATTCAGTTGTAATTAT+AGG | - | chr7_4:59837156-59837175 | Msa1167380:intron | 20.0% |
| !!! | ACATATCAAGAAATGATTTT+AGG | + | chr7_4:59837439-59837458 | None:intergenic | 20.0% |
| !!! | ATACATTTAATTTAGGATCA+AGG | - | chr7_4:59837491-59837510 | Msa1167380:intron | 20.0% |
| !! | GGAAAAATAATTGATGTATT+GGG | + | chr7_4:59837764-59837783 | None:intergenic | 20.0% |
| !! | AGGAAAAATAATTGATGTAT+TGG | + | chr7_4:59837765-59837784 | None:intergenic | 20.0% |
| !! | ATAATTTGAATAGATCCAAA+TGG | - | chr7_4:59837908-59837927 | Msa1167380:intron | 20.0% |
| !!! | TGGATTAAGTTTCTTTTTAA+AGG | - | chr7_4:59838244-59838263 | Msa1167380:CDS | 20.0% |
| !! | TTCAATCTATAAAATGTAGA+CGG | + | chr7_4:59838451-59838470 | None:intergenic | 20.0% |
| !! | ATAATAAGCAATTTCTTCTT+AGG | + | chr7_4:59836772-59836791 | None:intergenic | 20.0% |
| !! | TATATGTGAGAAACTTATTA+CGG | + | chr7_4:59836891-59836910 | None:intergenic | 20.0% |
| !! | TTCATAAATTCTTCACTAAA+TGG | + | chr7_4:59837008-59837027 | None:intergenic | 20.0% |
| !! | ATGAATTCAGTTGTAATTAT+AGG | - | chr7_4:59837156-59837175 | Msa1167380:intron | 20.0% |
| !!! | ACATATCAAGAAATGATTTT+AGG | + | chr7_4:59837439-59837458 | None:intergenic | 20.0% |
| !!! | ATACATTTAATTTAGGATCA+AGG | - | chr7_4:59837491-59837510 | Msa1167380:intron | 20.0% |
| !! | GGAAAAATAATTGATGTATT+GGG | + | chr7_4:59837764-59837783 | None:intergenic | 20.0% |
| !! | AGGAAAAATAATTGATGTAT+TGG | + | chr7_4:59837765-59837784 | None:intergenic | 20.0% |
| !! | ATAATTTGAATAGATCCAAA+TGG | - | chr7_4:59837908-59837927 | Msa1167380:intron | 20.0% |
| !!! | TGGATTAAGTTTCTTTTTAA+AGG | - | chr7_4:59838244-59838263 | Msa1167380:CDS | 20.0% |
| !! | TTCAATCTATAAAATGTAGA+CGG | + | chr7_4:59838451-59838470 | None:intergenic | 20.0% |
| ! | TTTACTTGCTTTATAACAAG+TGG | + | chr7_4:59836561-59836580 | None:intergenic | 25.0% |
| ! | TGATACACTTTGCAAAATTA+TGG | + | chr7_4:59836608-59836627 | None:intergenic | 25.0% |
| ! | AAAAAAGAGAGTTGTAGTTA+TGG | - | chr7_4:59836640-59836659 | Msa1167380:three_prime_UTR | 25.0% |
| ! | TTGCTTATTATGAACCTTAA+CGG | - | chr7_4:59836781-59836800 | Msa1167380:three_prime_UTR | 25.0% |
| ! | ATTATGTTACAGTTTACAAG+AGG | - | chr7_4:59836982-59837001 | Msa1167380:CDS | 25.0% |
| ! | TCTTAAATTATTATCGGTGT+CGG | + | chr7_4:59837134-59837153 | None:intergenic | 25.0% |
| ! | AAAACAAGCTACTATTTGTT+TGG | - | chr7_4:59837385-59837404 | Msa1167380:CDS | 25.0% |
| ! | AAACAAGCTACTATTTGTTT+GGG | - | chr7_4:59837386-59837405 | Msa1167380:CDS | 25.0% |
| !! | AAAGTATTTGAAGCAGAATA+TGG | + | chr7_4:59837617-59837636 | None:intergenic | 25.0% |
| ! | AAGAAAAACAAGTGAATTAC+CGG | + | chr7_4:59837677-59837696 | None:intergenic | 25.0% |
| ! | AGGTGATTCATTATCTTATT+TGG | - | chr7_4:59838264-59838283 | Msa1167380:CDS | 25.0% |
| ! | GCAATTTATTGTAAAATCCA+TGG | - | chr7_4:59838308-59838327 | Msa1167380:CDS | 25.0% |
| ! | TTTACTTGCTTTATAACAAG+TGG | + | chr7_4:59836561-59836580 | None:intergenic | 25.0% |
| ! | TGATACACTTTGCAAAATTA+TGG | + | chr7_4:59836608-59836627 | None:intergenic | 25.0% |
| ! | AAAAAAGAGAGTTGTAGTTA+TGG | - | chr7_4:59836640-59836659 | Msa1167380:three_prime_UTR | 25.0% |
| ! | TTGCTTATTATGAACCTTAA+CGG | - | chr7_4:59836781-59836800 | Msa1167380:three_prime_UTR | 25.0% |
| ! | ATTATGTTACAGTTTACAAG+AGG | - | chr7_4:59836982-59837001 | Msa1167380:CDS | 25.0% |
| ! | TCTTAAATTATTATCGGTGT+CGG | + | chr7_4:59837134-59837153 | None:intergenic | 25.0% |
| ! | AAAACAAGCTACTATTTGTT+TGG | - | chr7_4:59837385-59837404 | Msa1167380:CDS | 25.0% |
| ! | AAACAAGCTACTATTTGTTT+GGG | - | chr7_4:59837386-59837405 | Msa1167380:CDS | 25.0% |
| !! | AAAGTATTTGAAGCAGAATA+TGG | + | chr7_4:59837617-59837636 | None:intergenic | 25.0% |
| ! | AAGAAAAACAAGTGAATTAC+CGG | + | chr7_4:59837677-59837696 | None:intergenic | 25.0% |
| ! | AGGTGATTCATTATCTTATT+TGG | - | chr7_4:59838264-59838283 | Msa1167380:CDS | 25.0% |
| ! | GCAATTTATTGTAAAATCCA+TGG | - | chr7_4:59838308-59838327 | Msa1167380:CDS | 25.0% |
| AAAGGTGAAATAAACCGATT+CGG | + | chr7_4:59836537-59836556 | None:intergenic | 30.0% | |
| TGCTTTATAACAAGTGGAAA+AGG | + | chr7_4:59836555-59836574 | None:intergenic | 30.0% | |
| TTTGCAAAGTGTATCAAGAA+TGG | - | chr7_4:59836612-59836631 | Msa1167380:three_prime_UTR | 30.0% | |
| ! | TGCTTAGAAAGATTTGAAGT+GGG | - | chr7_4:59837032-59837051 | Msa1167380:CDS | 30.0% |
| TCAGTTGTAATTATAGGTGT+CGG | - | chr7_4:59837162-59837181 | Msa1167380:intron | 30.0% | |
| ! | CTGCATTTAGAGTAACAAAA+GGG | + | chr7_4:59837321-59837340 | None:intergenic | 30.0% |
| ! | TTCAGTTCTTTGAAAAAGAG+AGG | + | chr7_4:59837563-59837582 | None:intergenic | 30.0% |
| TCAAAGAACTGAAAAAAGTG+TGG | - | chr7_4:59837570-59837589 | Msa1167380:intron | 30.0% | |
| ATACAAGTCTTTCCTTAATC+CGG | - | chr7_4:59837655-59837674 | Msa1167380:CDS | 30.0% | |
| AATAGCATTATCCTTCACAT+AGG | + | chr7_4:59837984-59838003 | None:intergenic | 30.0% | |
| TATGTGAAGGATAATGCTAT+TGG | - | chr7_4:59837983-59838002 | Msa1167380:CDS | 30.0% | |
| TCAATTGTTAGCAGTTATAC+GGG | + | chr7_4:59838065-59838084 | None:intergenic | 30.0% | |
| CTCAATTGTTAGCAGTTATA+CGG | + | chr7_4:59838066-59838085 | None:intergenic | 30.0% | |
| GCTAACAATTGAGTAAAACA+TGG | - | chr7_4:59838073-59838092 | Msa1167380:intron | 30.0% | |
| AATCCAAACCATCATTACAT+GGG | + | chr7_4:59838230-59838249 | None:intergenic | 30.0% | |
| TAATCCAAACCATCATTACA+TGG | + | chr7_4:59838231-59838250 | None:intergenic | 30.0% | |
| AAAGGTGAAATAAACCGATT+CGG | + | chr7_4:59836537-59836556 | None:intergenic | 30.0% | |
| TGCTTTATAACAAGTGGAAA+AGG | + | chr7_4:59836555-59836574 | None:intergenic | 30.0% | |
| TTTGCAAAGTGTATCAAGAA+TGG | - | chr7_4:59836612-59836631 | Msa1167380:three_prime_UTR | 30.0% | |
| ! | TGCTTAGAAAGATTTGAAGT+GGG | - | chr7_4:59837032-59837051 | Msa1167380:CDS | 30.0% |
| TCAGTTGTAATTATAGGTGT+CGG | - | chr7_4:59837162-59837181 | Msa1167380:intron | 30.0% | |
| ! | CTGCATTTAGAGTAACAAAA+GGG | + | chr7_4:59837321-59837340 | None:intergenic | 30.0% |
| ! | TTCAGTTCTTTGAAAAAGAG+AGG | + | chr7_4:59837563-59837582 | None:intergenic | 30.0% |
| TCAAAGAACTGAAAAAAGTG+TGG | - | chr7_4:59837570-59837589 | Msa1167380:intron | 30.0% | |
| ATACAAGTCTTTCCTTAATC+CGG | - | chr7_4:59837655-59837674 | Msa1167380:CDS | 30.0% | |
| AATAGCATTATCCTTCACAT+AGG | + | chr7_4:59837984-59838003 | None:intergenic | 30.0% | |
| TATGTGAAGGATAATGCTAT+TGG | - | chr7_4:59837983-59838002 | Msa1167380:CDS | 30.0% | |
| TCAATTGTTAGCAGTTATAC+GGG | + | chr7_4:59838065-59838084 | None:intergenic | 30.0% | |
| CTCAATTGTTAGCAGTTATA+CGG | + | chr7_4:59838066-59838085 | None:intergenic | 30.0% | |
| GCTAACAATTGAGTAAAACA+TGG | - | chr7_4:59838073-59838092 | Msa1167380:intron | 30.0% | |
| AATCCAAACCATCATTACAT+GGG | + | chr7_4:59838230-59838249 | None:intergenic | 30.0% | |
| TAATCCAAACCATCATTACA+TGG | + | chr7_4:59838231-59838250 | None:intergenic | 30.0% | |
| ! | CTGAACTTTTGTGATCATCA+TGG | + | chr7_4:59836705-59836724 | None:intergenic | 35.0% |
| TATGGAGAAGAAATCCGTTA+AGG | + | chr7_4:59836798-59836817 | None:intergenic | 35.0% | |
| AGAAAGCAATTCCAAAGTCT+CGG | - | chr7_4:59836836-59836855 | Msa1167380:three_prime_UTR | 35.0% | |
| GTGACGATATTTGTAATCAG+CGG | + | chr7_4:59836863-59836882 | None:intergenic | 35.0% | |
| CTGCTTAGAAAGATTTGAAG+TGG | - | chr7_4:59837031-59837050 | Msa1167380:CDS | 35.0% | |
| ! | CCTGCATTTAGAGTAACAAA+AGG | + | chr7_4:59837322-59837341 | None:intergenic | 35.0% |
| ! | CCTTTTGTTACTCTAAATGC+AGG | - | chr7_4:59837319-59837338 | Msa1167380:intron | 35.0% |
| AAATGCAGGCATAATGTTGA+TGG | - | chr7_4:59837333-59837352 | Msa1167380:intron | 35.0% | |
| AGCTACTATTTGTTTGGGTA+CGG | - | chr7_4:59837391-59837410 | Msa1167380:CDS | 35.0% | |
| CAAGGTAAATGTAGAGATTC+TGG | - | chr7_4:59837509-59837528 | Msa1167380:intron | 35.0% | |
| !! | AGATTCTGGCTTTAAATCCT+TGG | - | chr7_4:59837523-59837542 | Msa1167380:intron | 35.0% |
| GGATTAAGGAAAGACTTGTA+TGG | + | chr7_4:59837656-59837675 | None:intergenic | 35.0% | |
| ACAAGTGAATTACCGGATTA+AGG | + | chr7_4:59837670-59837689 | None:intergenic | 35.0% | |
| TACTTGCATATGTCACCATT+TGG | + | chr7_4:59837926-59837945 | None:intergenic | 35.0% | |
| GACATATGCAAGTACTTGAA+AGG | - | chr7_4:59837932-59837951 | Msa1167380:intron | 35.0% | |
| TTACAACATCTCATCCTGAT+TGG | - | chr7_4:59838017-59838036 | Msa1167380:intron | 35.0% | |
| TACAACATCTCATCCTGATT+GGG | - | chr7_4:59838018-59838037 | Msa1167380:intron | 35.0% | |
| TGATCATACCCATGTAATGA+TGG | - | chr7_4:59838219-59838238 | Msa1167380:CDS | 35.0% | |
| ATACCCATGTAATGATGGTT+TGG | - | chr7_4:59838224-59838243 | Msa1167380:CDS | 35.0% | |
| ! | CATGGTTCGAATTTGACTTT+GGG | - | chr7_4:59838326-59838345 | Msa1167380:CDS | 35.0% |
| ! | CTGAACTTTTGTGATCATCA+TGG | + | chr7_4:59836705-59836724 | None:intergenic | 35.0% |
| TATGGAGAAGAAATCCGTTA+AGG | + | chr7_4:59836798-59836817 | None:intergenic | 35.0% | |
| AGAAAGCAATTCCAAAGTCT+CGG | - | chr7_4:59836836-59836855 | Msa1167380:three_prime_UTR | 35.0% | |
| GTGACGATATTTGTAATCAG+CGG | + | chr7_4:59836863-59836882 | None:intergenic | 35.0% | |
| CTGCTTAGAAAGATTTGAAG+TGG | - | chr7_4:59837031-59837050 | Msa1167380:CDS | 35.0% | |
| ! | CCTGCATTTAGAGTAACAAA+AGG | + | chr7_4:59837322-59837341 | None:intergenic | 35.0% |
| ! | CCTTTTGTTACTCTAAATGC+AGG | - | chr7_4:59837319-59837338 | Msa1167380:intron | 35.0% |
| AAATGCAGGCATAATGTTGA+TGG | - | chr7_4:59837333-59837352 | Msa1167380:intron | 35.0% | |
| AGCTACTATTTGTTTGGGTA+CGG | - | chr7_4:59837391-59837410 | Msa1167380:CDS | 35.0% | |
| CAAGGTAAATGTAGAGATTC+TGG | - | chr7_4:59837509-59837528 | Msa1167380:intron | 35.0% | |
| !! | AGATTCTGGCTTTAAATCCT+TGG | - | chr7_4:59837523-59837542 | Msa1167380:intron | 35.0% |
| GGATTAAGGAAAGACTTGTA+TGG | + | chr7_4:59837656-59837675 | None:intergenic | 35.0% | |
| ACAAGTGAATTACCGGATTA+AGG | + | chr7_4:59837670-59837689 | None:intergenic | 35.0% | |
| TACTTGCATATGTCACCATT+TGG | + | chr7_4:59837926-59837945 | None:intergenic | 35.0% | |
| GACATATGCAAGTACTTGAA+AGG | - | chr7_4:59837932-59837951 | Msa1167380:intron | 35.0% | |
| TTACAACATCTCATCCTGAT+TGG | - | chr7_4:59838017-59838036 | Msa1167380:intron | 35.0% | |
| TACAACATCTCATCCTGATT+GGG | - | chr7_4:59838018-59838037 | Msa1167380:intron | 35.0% | |
| TGATCATACCCATGTAATGA+TGG | - | chr7_4:59838219-59838238 | Msa1167380:CDS | 35.0% | |
| ATACCCATGTAATGATGGTT+TGG | - | chr7_4:59838224-59838243 | Msa1167380:CDS | 35.0% | |
| ! | CATGGTTCGAATTTGACTTT+GGG | - | chr7_4:59838326-59838345 | Msa1167380:CDS | 35.0% |
| AAGTTCAGCAGAACCAGAAT+TGG | - | chr7_4:59836717-59836736 | Msa1167380:three_prime_UTR | 40.0% | |
| AGTTCAGCAGAACCAGAATT+GGG | - | chr7_4:59836718-59836737 | Msa1167380:three_prime_UTR | 40.0% | |
| TCAAGAGAAAGACCCAATTC+TGG | + | chr7_4:59836733-59836752 | None:intergenic | 40.0% | |
| TCTCTTGAGAAGCTGAATCT+CGG | - | chr7_4:59836745-59836764 | Msa1167380:three_prime_UTR | 40.0% | |
| ! | AAAGATTTGAAGTGGGTGTC+TGG | - | chr7_4:59837039-59837058 | Msa1167380:CDS | 40.0% |
| AACACTCTTCCTATGAAGCA+CGG | - | chr7_4:59837086-59837105 | Msa1167380:intron | 40.0% | |
| AGGCTTCTTATTGTTCTCCA+AGG | + | chr7_4:59837543-59837562 | None:intergenic | 40.0% | |
| GTGTGGAATACTGTCAAGAA+AGG | - | chr7_4:59837587-59837606 | Msa1167380:intron | 40.0% | |
| TGGAATACTGTCAAGAAAGG+AGG | - | chr7_4:59837590-59837609 | Msa1167380:intron | 40.0% | |
| ATGTATTGGGCTGCAATTTG+AGG | + | chr7_4:59837751-59837770 | None:intergenic | 40.0% | |
| TCCTAAGTCATATGATCCTG+AGG | - | chr7_4:59837781-59837800 | Msa1167380:intron | 40.0% | |
| TCCTCAGGATCATATGACTT+AGG | + | chr7_4:59837785-59837804 | None:intergenic | 40.0% | |
| AGATGTTCAGTCCTATGTGA+AGG | - | chr7_4:59837970-59837989 | Msa1167380:CDS | 40.0% | |
| GGATGAGATGTTGTAATTGC+TGG | + | chr7_4:59838013-59838032 | None:intergenic | 40.0% | |
| TGTTGCATAATGCAATGCAG+TGG | - | chr7_4:59838104-59838123 | Msa1167380:intron | 40.0% | |
| CCAAAGTCAAATTCGAACCA+TGG | + | chr7_4:59838328-59838347 | None:intergenic | 40.0% | |
| ! | CCATGGTTCGAATTTGACTT+TGG | - | chr7_4:59838325-59838344 | Msa1167380:CDS | 40.0% |
| AAGTTCAGCAGAACCAGAAT+TGG | - | chr7_4:59836717-59836736 | Msa1167380:three_prime_UTR | 40.0% | |
| AGTTCAGCAGAACCAGAATT+GGG | - | chr7_4:59836718-59836737 | Msa1167380:three_prime_UTR | 40.0% | |
| TCAAGAGAAAGACCCAATTC+TGG | + | chr7_4:59836733-59836752 | None:intergenic | 40.0% | |
| TCTCTTGAGAAGCTGAATCT+CGG | - | chr7_4:59836745-59836764 | Msa1167380:three_prime_UTR | 40.0% | |
| ! | AAAGATTTGAAGTGGGTGTC+TGG | - | chr7_4:59837039-59837058 | Msa1167380:CDS | 40.0% |
| AACACTCTTCCTATGAAGCA+CGG | - | chr7_4:59837086-59837105 | Msa1167380:intron | 40.0% | |
| AGGCTTCTTATTGTTCTCCA+AGG | + | chr7_4:59837543-59837562 | None:intergenic | 40.0% | |
| GTGTGGAATACTGTCAAGAA+AGG | - | chr7_4:59837587-59837606 | Msa1167380:intron | 40.0% | |
| TGGAATACTGTCAAGAAAGG+AGG | - | chr7_4:59837590-59837609 | Msa1167380:intron | 40.0% | |
| ATGTATTGGGCTGCAATTTG+AGG | + | chr7_4:59837751-59837770 | None:intergenic | 40.0% | |
| TCCTAAGTCATATGATCCTG+AGG | - | chr7_4:59837781-59837800 | Msa1167380:intron | 40.0% | |
| TCCTCAGGATCATATGACTT+AGG | + | chr7_4:59837785-59837804 | None:intergenic | 40.0% | |
| AGATGTTCAGTCCTATGTGA+AGG | - | chr7_4:59837970-59837989 | Msa1167380:CDS | 40.0% | |
| GGATGAGATGTTGTAATTGC+TGG | + | chr7_4:59838013-59838032 | None:intergenic | 40.0% | |
| TGTTGCATAATGCAATGCAG+TGG | - | chr7_4:59838104-59838123 | Msa1167380:intron | 40.0% | |
| CCAAAGTCAAATTCGAACCA+TGG | + | chr7_4:59838328-59838347 | None:intergenic | 40.0% | |
| ! | CCATGGTTCGAATTTGACTT+TGG | - | chr7_4:59838325-59838344 | Msa1167380:CDS | 40.0% |
| GATTAGGTATGTTCCGGTGT+CGG | + | chr7_4:59837202-59837221 | None:intergenic | 45.0% | |
| ! | TCCTCGGATTAGGTATGTTC+CGG | + | chr7_4:59837208-59837227 | None:intergenic | 45.0% |
| TATGAAGCACGAACACTCCT+CGG | + | chr7_4:59837224-59837243 | None:intergenic | 45.0% | |
| TTTCGAATCGCCAATAGCAC+AGG | + | chr7_4:59837367-59837386 | None:intergenic | 45.0% | |
| GTCATATGATCCTGAGGACA+AGG | - | chr7_4:59837787-59837806 | Msa1167380:intron | 45.0% | |
| GGAACGAACACGAGAATAGA+AGG | + | chr7_4:59838044-59838063 | None:intergenic | 45.0% | |
| GATTAGGTATGTTCCGGTGT+CGG | + | chr7_4:59837202-59837221 | None:intergenic | 45.0% | |
| ! | TCCTCGGATTAGGTATGTTC+CGG | + | chr7_4:59837208-59837227 | None:intergenic | 45.0% |
| TATGAAGCACGAACACTCCT+CGG | + | chr7_4:59837224-59837243 | None:intergenic | 45.0% | |
| TTTCGAATCGCCAATAGCAC+AGG | + | chr7_4:59837367-59837386 | None:intergenic | 45.0% | |
| GTCATATGATCCTGAGGACA+AGG | - | chr7_4:59837787-59837806 | Msa1167380:intron | 45.0% | |
| GGAACGAACACGAGAATAGA+AGG | + | chr7_4:59838044-59838063 | None:intergenic | 45.0% | |
| TGTCAGTGACACGAGCTCTA+TGG | + | chr7_4:59836816-59836835 | None:intergenic | 50.0% | |
| TAATCAGCGGTCCGAGACTT+TGG | + | chr7_4:59836850-59836869 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACGACA+CGG | - | chr7_4:59837097-59837116 | Msa1167380:intron | 50.0% | |
| !! | TATTATCGGTGTCGGCGTGT+GGG | + | chr7_4:59837126-59837145 | None:intergenic | 50.0% |
| !! | TTATTATCGGTGTCGGCGTG+TGG | + | chr7_4:59837127-59837146 | None:intergenic | 50.0% |
| ACCGGAACATACCTAATCCG+AGG | - | chr7_4:59837204-59837223 | Msa1167380:CDS | 50.0% | |
| GGTGCTTTAGCCTGTGCTAT+TGG | - | chr7_4:59837354-59837373 | Msa1167380:CDS | 50.0% | |
| TCCTGAGGACAAGGATGACA+AGG | - | chr7_4:59837796-59837815 | Msa1167380:intron | 50.0% | |
| ! | GACAAGGATGACAAGGCACT+GGG | - | chr7_4:59837803-59837822 | Msa1167380:intron | 50.0% |
| CGAGAATAGAAGGCCCAATC+AGG | + | chr7_4:59838034-59838053 | None:intergenic | 50.0% | |
| TGTCAGTGACACGAGCTCTA+TGG | + | chr7_4:59836816-59836835 | None:intergenic | 50.0% | |
| TAATCAGCGGTCCGAGACTT+TGG | + | chr7_4:59836850-59836869 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACGACA+CGG | - | chr7_4:59837097-59837116 | Msa1167380:intron | 50.0% | |
| !! | TATTATCGGTGTCGGCGTGT+GGG | + | chr7_4:59837126-59837145 | None:intergenic | 50.0% |
| !! | TTATTATCGGTGTCGGCGTG+TGG | + | chr7_4:59837127-59837146 | None:intergenic | 50.0% |
| ACCGGAACATACCTAATCCG+AGG | - | chr7_4:59837204-59837223 | Msa1167380:CDS | 50.0% | |
| GGTGCTTTAGCCTGTGCTAT+TGG | - | chr7_4:59837354-59837373 | Msa1167380:CDS | 50.0% | |
| TCCTGAGGACAAGGATGACA+AGG | - | chr7_4:59837796-59837815 | Msa1167380:intron | 50.0% | |
| ! | GACAAGGATGACAAGGCACT+GGG | - | chr7_4:59837803-59837822 | Msa1167380:intron | 50.0% |
| CGAGAATAGAAGGCCCAATC+AGG | + | chr7_4:59838034-59838053 | None:intergenic | 50.0% | |
| ! | GGGTGTCTGGTCTTCTGCAA+TGG | - | chr7_4:59837052-59837071 | Msa1167380:CDS | 55.0% |
| GTGTCGTGTCCGTGCTTCAT+AGG | + | chr7_4:59837098-59837117 | None:intergenic | 55.0% | |
| ! | TTCCGGTGTCGGATACGAGT+CGG | + | chr7_4:59837191-59837210 | None:intergenic | 55.0% |
| GCACGAACACTCCTCGGATT+AGG | + | chr7_4:59837218-59837237 | None:intergenic | 55.0% | |
| GCCTTGTCATCCTTGTCCTC+AGG | + | chr7_4:59837800-59837819 | None:intergenic | 55.0% | |
| GGACAAGGATGACAAGGCAC+TGG | - | chr7_4:59837802-59837821 | Msa1167380:intron | 55.0% | |
| ! | GGGTGTCTGGTCTTCTGCAA+TGG | - | chr7_4:59837052-59837071 | Msa1167380:CDS | 55.0% |
| GTGTCGTGTCCGTGCTTCAT+AGG | + | chr7_4:59837098-59837117 | None:intergenic | 55.0% | |
| ! | TTCCGGTGTCGGATACGAGT+CGG | + | chr7_4:59837191-59837210 | None:intergenic | 55.0% |
| GCACGAACACTCCTCGGATT+AGG | + | chr7_4:59837218-59837237 | None:intergenic | 55.0% | |
| GCCTTGTCATCCTTGTCCTC+AGG | + | chr7_4:59837800-59837819 | None:intergenic | 55.0% | |
| GGACAAGGATGACAAGGCAC+TGG | - | chr7_4:59837802-59837821 | Msa1167380:intron | 55.0% | |
| !! | CACCGACTCGTATCCGACAC+CGG | - | chr7_4:59837186-59837205 | Msa1167380:intron | 60.0% |
| !! | CACCGACTCGTATCCGACAC+CGG | - | chr7_4:59837186-59837205 | Msa1167380:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59836534 | 59838481 | 59836534 | ID=Msa1167380;Name=Msa1167380 |
| chr7_4 | mRNA | 59836534 | 59838481 | 59836534 | ID=Msa1167380-mRNA-1;Parent=Msa1167380;Name=Msa1167380-mRNA-1;_AED=0.07;_eAED=0.07;_QI=97|1|1|1|1|1|6|397|268 |
| chr7_4 | exon | 59836534 | 59837094 | 59836534 | ID=Msa1167380-mRNA-1:exon:18597;Parent=Msa1167380-mRNA-1 |
| chr7_4 | exon | 59837191 | 59837254 | 59837191 | ID=Msa1167380-mRNA-1:exon:18596;Parent=Msa1167380-mRNA-1 |
| chr7_4 | exon | 59837339 | 59837509 | 59837339 | ID=Msa1167380-mRNA-1:exon:18595;Parent=Msa1167380-mRNA-1 |
| chr7_4 | exon | 59837608 | 59837674 | 59837608 | ID=Msa1167380-mRNA-1:exon:18594;Parent=Msa1167380-mRNA-1 |
| chr7_4 | exon | 59837940 | 59838021 | 59837940 | ID=Msa1167380-mRNA-1:exon:18593;Parent=Msa1167380-mRNA-1 |
| chr7_4 | exon | 59838126 | 59838481 | 59838126 | ID=Msa1167380-mRNA-1:exon:18592;Parent=Msa1167380-mRNA-1 |
| chr7_4 | five_prime_UTR | 59838385 | 59838481 | 59838385 | ID=Msa1167380-mRNA-1:five_prime_utr;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59838126 | 59838384 | 59838126 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59837940 | 59838021 | 59837940 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59837608 | 59837674 | 59837608 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59837339 | 59837509 | 59837339 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59837191 | 59837254 | 59837191 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | CDS | 59836931 | 59837094 | 59836931 | ID=Msa1167380-mRNA-1:cds;Parent=Msa1167380-mRNA-1 |
| chr7_4 | three_prime_UTR | 59836534 | 59836930 | 59836534 | ID=Msa1167380-mRNA-1:three_prime_utr;Parent=Msa1167380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
