AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046160 MtrunA17_Chr1g0213001 98.387 682 11 0 1 682 1 682 0.0 1368
Msa0046160 MtrunA17_Chr1g0182001 54.976 211 89 2 3 207 2 212 1.14e-67 229
Msa0046160 MtrunA17_Chr1g0182001 44.928 276 129 2 260 535 202 454 1.23e-60 210
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046160 AT5G13560.1 60.058 686 253 7 3 676 2 678 0.0 780
Msa0046160 AT2G37370.3 50.585 684 316 7 3 681 2 668 0.0 608
Msa0046160 AT2G37370.2 50.585 684 316 7 3 681 2 668 0.0 608
Msa0046160 AT2G37370.1 50.585 684 316 7 3 681 2 668 0.0 608
Msa0046160 AT2G37370.4 54.135 532 238 3 3 534 2 527 0.0 528

Find 150 sgRNAs with CRISPR-Local

Find 841 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTATAGGCTTTGTCTTAC+TGG 0.137879 1_1:-78213717 Msa0046160:intron
TGAAGCGTGCAATGGAAATT+AGG 0.189154 1_1:+78216425 None:intergenic
CCCTTCTCCTGGAGATGTTT+GGG 0.212578 1_1:-78213951 Msa0046160:intron
CTTTATTATGATTCTGATAT+TGG 0.221062 1_1:-78214867 Msa0046160:CDS
AATGCGATCATGAAGGATTT+TGG 0.222308 1_1:+78216216 None:intergenic
CCTTGCTGTTGAAGATATTA+AGG 0.258689 1_1:-78215824 Msa0046160:CDS
TCCCTTCTCCTGGAGATGTT+TGG 0.263141 1_1:-78213952 Msa0046160:CDS
CAAAACGTGGATCAACTTTC+TGG 0.265233 1_1:-78206894 Msa0046160:CDS
AGGGTTTGTGGTTTCGAAAT+TGG 0.268624 1_1:+78216445 None:intergenic
GAATCCACAGAGACCTTCTT+TGG 0.276603 1_1:-78215800 Msa0046160:intron
GTTGTAGGTTAATACTTCTT+TGG 0.286653 1_1:-78207172 Msa0046160:intron
GATTTGAGTGAAGGTGATTT+TGG 0.288162 1_1:+78204659 None:intergenic
TCTTGAAGCTGAACTGAAAA+AGG 0.292038 1_1:-78208267 Msa0046160:intron
AGTAAGCAGCTTACAAGATT+TGG 0.297153 1_1:-78213670 Msa0046160:CDS
TTACAAATTCAGTGCTTTAC+AGG 0.300972 1_1:+78204283 None:intergenic
GCCAAGCTTGAATCTGAGTT+TGG 0.308709 1_1:-78204605 Msa0046160:CDS
CTCAACAGGGAAATATTTCC+AGG 0.314692 1_1:-78205166 Msa0046160:intron
TCACAACAAATGTTCCAATA+TGG 0.319869 1_1:+78205879 None:intergenic
TCTCATTACCTTGGCTTCAT+AGG 0.340227 1_1:+78205543 None:intergenic
GAGCCTTGTATTAACCATAT+TGG 0.343181 1_1:-78205893 Msa0046160:CDS
GAAGCGTGCAATGGAAATTA+GGG 0.359327 1_1:+78216426 None:intergenic
CTGAGAGAGTTCAGTTGCTT+AGG 0.366068 1_1:-78215927 Msa0046160:CDS
AGGGAAACCTCTTCCTCGTT+TGG 0.366803 1_1:+78213970 None:intergenic
GCTTGGCTAATTCAGCTTCA+TGG 0.372198 1_1:+78204621 None:intergenic
ATGCTGAAGCCTCTAGTCTT+AGG 0.373993 1_1:-78212462 Msa0046160:CDS
TCAACTTTCTGGAAGATACT+TGG 0.382032 1_1:-78206883 Msa0046160:CDS
ATCTTGTAAGCTGCTTACTA+TGG 0.382980 1_1:+78213674 None:intergenic
AAAACATCGCGAAAATTTAG+TGG 0.389484 1_1:+78214837 None:intergenic
AAATTTCTGTATTTGACTGC+TGG 0.391944 1_1:+78206855 None:intergenic
TGAGAATTTGTCGGGAGCTT+CGG 0.392252 1_1:-78215878 Msa0046160:CDS
AGTTGAGCATCTGAAGATAA+AGG 0.396507 1_1:-78207079 Msa0046160:intron
GATTGTTTGCTTCCTCAAAC+TGG 0.403188 1_1:+78207106 None:intergenic
CAACAGAGGAAATTAATGAT+TGG 0.407683 1_1:-78204559 Msa0046160:CDS
TCACCTTCTGCTTCAGTTGG+AGG 0.409354 1_1:-78204716 Msa0046160:CDS
CCTATAGGCTTTGTCTTACT+GGG 0.415841 1_1:-78213716 Msa0046160:intron
GCTAATATGCCATACGCTCC+TGG 0.421688 1_1:-78204148 Msa0046160:three_prime_UTR
GACCTCGACGGCTTTGTTGA+CGG 0.422835 1_1:+78216324 None:intergenic
CCTTCACCTTCTGCTTCAGT+TGG 0.429537 1_1:-78204719 Msa0046160:CDS
GCCTTCAGCAACGGCTTGAC+CGG 0.436205 1_1:+78216240 None:intergenic
AACAGAGGAAATTAATGATT+GGG 0.436246 1_1:-78204558 Msa0046160:CDS
TTTGCACAACGTGCCATCAC+TGG 0.440668 1_1:-78213273 Msa0046160:CDS
CAGCAATAATCCTTCCAGTC+TGG 0.447710 1_1:+78211488 None:intergenic
AAAGAGATTGAGAATTTGTC+GGG 0.449006 1_1:-78215886 Msa0046160:CDS
GGAAGAGGTTTCCCTTCTCC+TGG 0.453671 1_1:-78213962 Msa0046160:CDS
TCCTTACCAGTACTTCATCT+TGG 0.453824 1_1:+78213628 None:intergenic
GCAATGGAAATTAGGGTTTG+TGG 0.454213 1_1:+78216433 None:intergenic
CGGTTCCTTCCAGGAGCGTA+TGG 0.467496 1_1:+78204139 None:intergenic
GGGCTCTCTATTTCAAGAAC+TGG 0.470284 1_1:+78204791 None:intergenic
TACAGAAATTTATGAGAAGC+AGG 0.470345 1_1:-78206843 Msa0046160:CDS
GTGACTAAAGGTGGTGAAAC+TGG 0.471373 1_1:-78209110 Msa0046160:CDS
CTAAGCAACTGAACTCTCTC+AGG 0.473370 1_1:+78215928 None:intergenic
GCCGGTCAAGCCGTTGCTGA+AGG 0.474065 1_1:-78216241 Msa0046160:CDS
TCCTGAGGTTCATGCCCAAA+AGG 0.476205 1_1:-78211436 Msa0046160:intron
TGACAAGCTGAAGGTCTTAA+CGG 0.478018 1_1:-78210763 Msa0046160:CDS
TAGATAAATCTGTAAGCTAT+AGG 0.479813 1_1:-78204383 Msa0046160:three_prime_UTR
AAATTTATGAGAAGCAGGTC+AGG 0.484747 1_1:-78206838 Msa0046160:intron
TATTATGATTCTGATATTGG+AGG 0.487783 1_1:-78214864 Msa0046160:CDS
CAACTTTCTGGAAGATACTT+GGG 0.487980 1_1:-78206882 Msa0046160:CDS
TAAAGAGATTGAGAATTTGT+CGG 0.489122 1_1:-78215887 Msa0046160:CDS
CAGATACAGATAGATACTAT+AGG 0.490384 1_1:-78216480 Msa0046160:five_prime_UTR
TATTACCACTTTCAGTGTAG+TGG 0.493198 1_1:-78205213 Msa0046160:CDS
TCCAAACTCAGATTCAAGCT+TGG 0.493581 1_1:+78204604 None:intergenic
ACTCAAATCAGATCAGGTAT+TGG 0.495936 1_1:-78204645 Msa0046160:CDS
ACCTTCACTCAAATCAGATC+AGG 0.497789 1_1:-78204651 Msa0046160:CDS
TTAAAAGTTCGCGTGACTAA+AGG 0.500180 1_1:-78209122 Msa0046160:CDS
GAGTTCAGTTGCTTAGGAGA+TGG 0.504417 1_1:-78215921 Msa0046160:CDS
GGAAAGTTTCTAACCAAAGA+AGG 0.507071 1_1:+78215787 None:intergenic
AGGTGGTGAAACTGGTGAAA+AGG 0.507701 1_1:-78209102 Msa0046160:CDS
TGAAGCTCCAAACGAGGAAG+AGG 0.509005 1_1:-78213977 Msa0046160:CDS
TCTTCCTCAAGATTTCTCCT+TGG 0.509071 1_1:+78205574 None:intergenic
AAAAGCGTATTTCTGACAAC+AGG 0.513459 1_1:-78210710 Msa0046160:intron
GATTAGAATTTGTTCCAGAC+TGG 0.514478 1_1:-78211502 Msa0046160:CDS
TGCACAGACAGTCAAAAGAT+TGG 0.515781 1_1:-78215977 Msa0046160:CDS
AAGCTACCAAGATGAAGTAC+TGG 0.518951 1_1:-78213634 Msa0046160:intron
TTGTCGGGAGCTTCGGCTGA+AGG 0.519241 1_1:-78215871 Msa0046160:CDS
GGAGGGTATAACACTATCAA+TGG 0.520798 1_1:-78214796 Msa0046160:intron
TAAATCTGTAAGCTATAGGT+TGG 0.523719 1_1:-78204379 Msa0046160:three_prime_UTR
TTTAATCTTTACAGATGCAA+AGG 0.525372 1_1:+78204326 None:intergenic
ACCTCTGAGTCAAATTCTTG+AGG 0.526194 1_1:+78205855 None:intergenic
CTGCTGCTCAAGCACGATTG+TGG 0.526248 1_1:-78207149 Msa0046160:CDS
GGAAGAGAGAGACCAGTTTG+AGG 0.527497 1_1:-78207118 Msa0046160:CDS
CAGTGAGATAACAACTTCAC+AGG 0.527733 1_1:-78212431 Msa0046160:CDS
TCAGCTTCTTACTACTTACC+AGG 0.534463 1_1:-78206042 Msa0046160:intron
GTTATCCACTACACTGAAAG+TGG 0.538687 1_1:+78205208 None:intergenic
AGAATTTGTTCCAGACTGGA+AGG 0.543034 1_1:-78211498 Msa0046160:CDS
AGACTCACCCAAACATCTCC+AGG 0.544973 1_1:+78213944 None:intergenic
ATGTTTCAGTCTTCACAGGT+GGG 0.545766 1_1:+78204771 None:intergenic
TTGCACAACGTGCCATCACT+GGG 0.552720 1_1:-78213272 Msa0046160:CDS
TGAATCCTCAGTATCTGCAC+TGG 0.552752 1_1:+78205609 None:intergenic
GGTAATGTTTCAGTCTTCAC+AGG 0.553096 1_1:+78204767 None:intergenic
AATTTACAATGCGATCATGA+AGG 0.555854 1_1:+78216209 None:intergenic
CCCAAACATCTCCAGGAGAA+GGG 0.556829 1_1:+78213951 None:intergenic
GTAAGTAGTAAGAAGCTGAA+TGG 0.557069 1_1:+78206046 None:intergenic
ATGAAGCTTGCAAGATCAGA+CGG 0.557630 1_1:-78204350 Msa0046160:three_prime_UTR
GGTTTCGAAATTGGAATGCA+CGG 0.559817 1_1:+78216454 None:intergenic
CAGGCTTTAAAAGTTGCACT+CGG 0.560691 1_1:-78211528 Msa0046160:CDS
GCTTGAATCTGAGTTTGGAA+AGG 0.561070 1_1:-78204600 Msa0046160:CDS
ACCCAAACATCTCCAGGAGA+AGG 0.564495 1_1:+78213950 None:intergenic
GTCAACAAAGCCGTCGAGGT+CGG 0.568463 1_1:-78216322 Msa0046160:CDS
TCTTCAAAGTCAGGCACTGG+AGG 0.570285 1_1:-78214814 Msa0046160:CDS
ATTCACAAGTATTAAGTCCA+AGG 0.573750 1_1:-78205591 Msa0046160:CDS
TACAAATTCAGTGCTTTACA+GGG 0.575777 1_1:+78204284 None:intergenic
AGCACGATTGTGGAACGTGA+GGG 0.577368 1_1:-78207139 Msa0046160:CDS
AATGTTTCAGTCTTCACAGG+TGG 0.579834 1_1:+78204770 None:intergenic
CTTCAAAGTCAGGCACTGGA+GGG 0.580760 1_1:-78214813 Msa0046160:CDS
TAAATAGGTTGACAAGCTGA+AGG 0.582137 1_1:-78210772 Msa0046160:intron
GGCTTGTTGAACGACGGTGT+CGG 0.584473 1_1:+78216261 None:intergenic
GGAAACAGAAGCAACCCTAC+AGG 0.586700 1_1:-78212374 Msa0046160:intron
GAGAGAAATGAAGCGTGCAA+TGG 0.590318 1_1:+78216417 None:intergenic
GTTCTTGTTGCCGACCTCGA+CGG 0.591608 1_1:+78216312 None:intergenic
TGTCTCTGTCTTTGAAAACT+CGG 0.592272 1_1:+78204691 None:intergenic
GAGCTTCTTCCTAAGACTAG+AGG 0.596775 1_1:+78212453 None:intergenic
TACAACAGAACACACCTGTA+GGG 0.597918 1_1:+78212360 None:intergenic
AAATCAATTCTGATCTCGCA+AGG 0.602182 1_1:-78213245 Msa0046160:intron
AAAGTTCGCGTGACTAAAGG+TGG 0.602456 1_1:-78209119 Msa0046160:CDS
GGATCTTAGCCACGATGACA+TGG 0.603066 1_1:+78216348 None:intergenic
AAGTCCAAGGAGAAATCTTG+AGG 0.609204 1_1:-78205578 Msa0046160:CDS
CCTTAATATCTTCAACAGCA+AGG 0.610486 1_1:+78215824 None:intergenic
GTTCCAATATGGTTAATACA+AGG 0.611572 1_1:+78205890 None:intergenic
CGCCGTCAACAAAGCCGTCG+AGG 0.612660 1_1:-78216326 Msa0046160:CDS
AGAGGATGAAGACGTCGATG+AGG 0.614864 1_1:+78216541 None:intergenic
ACCTGATCTGATTTGAGTGA+AGG 0.615572 1_1:+78204650 None:intergenic
TGAAGCTTGCAAGATCAGAC+GGG 0.616829 1_1:-78204349 Msa0046160:three_prime_UTR
ATATTTGACCTATGAAGCCA+AGG 0.617510 1_1:-78205551 Msa0046160:intron
GTACCTCCAACTGAAGCAGA+AGG 0.621842 1_1:+78204713 None:intergenic
ACCTCAAGAATTTGACTCAG+AGG 0.624174 1_1:-78205856 Msa0046160:intron
GACACCGTCGTTCAACAAGC+CGG 0.625021 1_1:-78216259 Msa0046160:CDS
AATTGATTATAAAGCTGCTG+AGG 0.625723 1_1:-78212395 Msa0046160:CDS
AAGCACGATTGTGGAACGTG+AGG 0.636747 1_1:-78207140 Msa0046160:CDS
CCAACTGAAGCAGAAGGTGA+AGG 0.636940 1_1:+78204719 None:intergenic
ATGATTTGTAATGATTAGCA+TGG 0.637047 1_1:-78204240 Msa0046160:three_prime_UTR
TGAAACTGGTGAAAAGGAGA+AGG 0.639219 1_1:-78209096 Msa0046160:intron
ATATGCCATACGCTCCTGGA+AGG 0.639949 1_1:-78204144 Msa0046160:three_prime_UTR
GACAACCAGTGCAGATACTG+AGG 0.645584 1_1:-78205614 Msa0046160:CDS
TTGACCGGCTTGTTGAACGA+CGG 0.661518 1_1:+78216255 None:intergenic
CTAACCAAAGAAGGTCTCTG+TGG 0.664488 1_1:+78215796 None:intergenic
AGTGAGATAACAACTTCACA+GGG 0.666818 1_1:-78212430 Msa0046160:CDS
ATGACATGGTTTCGATACAG+AGG 0.668452 1_1:+78216362 None:intergenic
TGTTTGTCTACAGAAAGAGT+TGG 0.668783 1_1:-78205915 Msa0046160:intron
GATTATTGAAGCTCCAAACG+AGG 0.672469 1_1:-78213983 Msa0046160:CDS
CTCGACGGCTTTGTTGACGG+CGG 0.681932 1_1:+78216327 None:intergenic
TGTTCTTTAGGTGAAGCGAG+AGG 0.683211 1_1:-78213307 Msa0046160:intron
TACTCAAGATTACTCAACAG+AGG 0.683783 1_1:-78204573 Msa0046160:CDS
AAGCAATGGAGACTCTCCTG+AGG 0.710271 1_1:-78211451 Msa0046160:CDS
AATCAGATGTCATCAAAACG+TGG 0.712961 1_1:-78206907 Msa0046160:CDS
TGAGATAACAACTTCACAGG+GGG 0.718246 1_1:-78212428 Msa0046160:CDS
GTATCGAAACCATGTCATCG+TGG 0.720695 1_1:-78216357 Msa0046160:exon
TGATGAATTGGAGAGACACG+AGG 0.721987 1_1:-78206087 Msa0046160:CDS
GAAGCTGCTATCTCGCATCG+AGG 0.750129 1_1:-78215952 Msa0046160:CDS
GTGAGATAACAACTTCACAG+GGG 0.793162 1_1:-78212429 Msa0046160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTAAAAAAATAAAAA+GGG + chr1_1:78216218-78216237 None:intergenic 0.0%
!! TTAATATTAAAAAAATAAAA+AGG + chr1_1:78216219-78216238 None:intergenic 0.0%
!!! TTGTTTTTTCATTTTTTTTT+TGG - chr1_1:78205108-78205127 Msa0046160:intron 10.0%
!! GTTATATAAATTAAATATAG+AGG - chr1_1:78205204-78205223 Msa0046160:CDS 10.0%
!! AATATAATAATATATGTGAT+TGG - chr1_1:78208398-78208417 Msa0046160:intron 10.0%
!!! CTTTTTTTAATTTAAAAACA+AGG + chr1_1:78209109-78209128 None:intergenic 10.0%
!!! CTTGTTTTTAAATTAAAAAA+AGG - chr1_1:78209107-78209126 Msa0046160:CDS 10.0%
!! ATATTATCATGTTTATAAAT+AGG - chr1_1:78209894-78209913 Msa0046160:intron 10.0%
!!! GTTATCTTAATTAATTTTTA+GGG - chr1_1:78210043-78210062 Msa0046160:intron 10.0%
!!! AATTAAGTTTTATTTAAAAC+TGG - chr1_1:78210346-78210365 Msa0046160:intron 10.0%
!!! ATTAAGTTTTATTTAAAACT+GGG - chr1_1:78210347-78210366 Msa0046160:intron 10.0%
!! TTATATCATTTATATAGTAA+AGG - chr1_1:78210746-78210765 Msa0046160:CDS 10.0%
!!! TTTTTTAAAATAAAAAAGTG+AGG - chr1_1:78211361-78211380 Msa0046160:intron 10.0%
!!! TAAGTTTTTAAATTTCAAAT+AGG + chr1_1:78212688-78212707 None:intergenic 10.0%
!!! AATACTTTTAAATTAAAAGA+AGG + chr1_1:78212859-78212878 None:intergenic 10.0%
!! AAATAATTGATGTATATAAT+AGG - chr1_1:78214046-78214065 Msa0046160:intron 10.0%
!! AAAGAAAATGTTAAAAAATG+AGG - chr1_1:78204081-78204100 Msa0046160:three_prime_UTR 15.0%
!! CTTAAATTAGGATAATAATT+AGG + chr1_1:78204528-78204547 None:intergenic 15.0%
!!! ACATTAGTTTAATTTAATTC+TGG - chr1_1:78204550-78204569 Msa0046160:CDS 15.0%
!! ACTATCAAGAAATTTATAAA+GGG + chr1_1:78205384-78205403 None:intergenic 15.0%
!! TACTATCAAGAAATTTATAA+AGG + chr1_1:78205385-78205404 None:intergenic 15.0%
!! AAATGGTATTTGTATTAAAT+TGG - chr1_1:78206502-78206521 Msa0046160:intron 15.0%
!!! TAGTATTATACATTTTTCAA+CGG - chr1_1:78206762-78206781 Msa0046160:intron 15.0%
!! ATTTACTGCTTAATAAATAT+CGG + chr1_1:78207103-78207122 None:intergenic 15.0%
!!! TTCTCATTTTTAGATTATAT+TGG + chr1_1:78208141-78208160 None:intergenic 15.0%
!!! ATCTTAGTAAAATTTTGTTT+TGG - chr1_1:78208824-78208843 Msa0046160:intron 15.0%
!!! TTTAATTTAAAAACAAGGAA+GGG + chr1_1:78209104-78209123 None:intergenic 15.0%
!!! TTTTAATTTAAAAACAAGGA+AGG + chr1_1:78209105-78209124 None:intergenic 15.0%
!! AAGAAAAAAAATATAAGCAA+TGG - chr1_1:78209216-78209235 Msa0046160:intron 15.0%
!!! AAAAAAAAATTGTACCTTTT+GGG + chr1_1:78209262-78209281 None:intergenic 15.0%
!!! AAAAAAAAAATTGTACCTTT+TGG + chr1_1:78209263-78209282 None:intergenic 15.0%
!! AAACTAAAACATAATGAAAA+GGG - chr1_1:78209448-78209467 Msa0046160:intron 15.0%
!!! TTATTTCATTTTTGGTTATT+TGG - chr1_1:78209771-78209790 Msa0046160:intron 15.0%
!!! ATGTTAAACTATGAAATTTT+TGG - chr1_1:78209996-78210015 Msa0046160:intron 15.0%
!!! GGTTATCTTAATTAATTTTT+AGG - chr1_1:78210042-78210061 Msa0046160:intron 15.0%
!! TTTAATCCTTTCATTATTAA+TGG - chr1_1:78210605-78210624 Msa0046160:intron 15.0%
!!! AAGATTTCAATAATTTTGTT+TGG + chr1_1:78211037-78211056 None:intergenic 15.0%
!!! ATTTTCCTTAATTTAATCAA+CGG - chr1_1:78212009-78212028 Msa0046160:intron 15.0%
!! AAACTTAAAAAACTTCAAAT+AGG - chr1_1:78212701-78212720 Msa0046160:intron 15.0%
!! TGAAACTTAAAAAAACTTAA+AGG - chr1_1:78212755-78212774 Msa0046160:intron 15.0%
!!! TTTGAAATTATCTTTTTTCT+TGG - chr1_1:78213625-78213644 Msa0046160:intron 15.0%
!! TTTATTAGATACACAAAATT+AGG - chr1_1:78213946-78213965 Msa0046160:intron 15.0%
!! TTACTAGTATTTATTACATT+AGG - chr1_1:78213970-78213989 Msa0046160:CDS 15.0%
!!! GTTTTATCATAAACAATATT+TGG - chr1_1:78214384-78214403 Msa0046160:intron 15.0%
!! ATAATTATATTCGATATTTC+CGG + chr1_1:78214510-78214529 None:intergenic 15.0%
!! TGTAAAAAAATAAAGAACAA+TGG + chr1_1:78214537-78214556 None:intergenic 15.0%
!!! GTATTTTTGTACTAATATTT+TGG - chr1_1:78215341-78215360 Msa0046160:intron 15.0%
!! CCTAAAATTGCAATAAAATT+AGG + chr1_1:78204505-78204524 None:intergenic 20.0%
!!! CCTAATTTTATTGCAATTTT+AGG - chr1_1:78204502-78204521 Msa0046160:exon 20.0%
!!! AAACTAATGTTGCTTAAATT+AGG + chr1_1:78204540-78204559 None:intergenic 20.0%
!! TCAAAATTCAAAACACTAAA+TGG + chr1_1:78204607-78204626 None:intergenic 20.0%
!! ACACAGAGAAAAAATTAATT+GGG + chr1_1:78205174-78205193 None:intergenic 20.0%
!! TAATTTATATAACACAACAC+AGG + chr1_1:78205197-78205216 None:intergenic 20.0%
!!! TATAAAGGGTCTTATATTTA+TGG + chr1_1:78205370-78205389 None:intergenic 20.0%
!! TTTCATATTCCAAAACAAAT+TGG + chr1_1:78205493-78205512 None:intergenic 20.0%
!! CTTTATTATGATTCTGATAT+TGG - chr1_1:78205814-78205833 Msa0046160:intron 20.0%
!! AATTAGCATCTAATATTCAT+AGG - chr1_1:78206387-78206406 Msa0046160:intron 20.0%
!!! TTTTGTTAATATTCCACAAA+TGG - chr1_1:78206485-78206504 Msa0046160:intron 20.0%
!! TTTAATACAAATACCATTTG+TGG + chr1_1:78206501-78206520 None:intergenic 20.0%
!! TGTACATCAAAGAAAAATAA+AGG + chr1_1:78206543-78206562 None:intergenic 20.0%
!!! TTTGTTATAATTGCTGATAA+TGG - chr1_1:78206639-78206658 Msa0046160:intron 20.0%
!! AAGGTTATATTAAAATGGTT+TGG + chr1_1:78206942-78206961 None:intergenic 20.0%
!! GGAATAAGGTTATATTAAAA+TGG + chr1_1:78206947-78206966 None:intergenic 20.0%
!! TAATATAACCTTATTCCTAT+AGG - chr1_1:78206950-78206969 Msa0046160:CDS 20.0%
!!! ACTAATTATGATATTTTCCT+GGG + chr1_1:78207921-78207940 None:intergenic 20.0%
!!! TACTAATTATGATATTTTCC+TGG + chr1_1:78207922-78207941 None:intergenic 20.0%
!!! TTAGATTATATTGGTAATCA+TGG + chr1_1:78208132-78208151 None:intergenic 20.0%
!! TTCATTACTGACAAAATAAA+GGG + chr1_1:78208362-78208381 None:intergenic 20.0%
!! ATTCATTACTGACAAAATAA+AGG + chr1_1:78208363-78208382 None:intergenic 20.0%
!! TGTGATTGGATAATAATATT+TGG - chr1_1:78208412-78208431 Msa0046160:intron 20.0%
!! GTGATTGGATAATAATATTT+GGG - chr1_1:78208413-78208432 Msa0046160:intron 20.0%
!! AAACACTTTCTTTAACTAAA+GGG + chr1_1:78208533-78208552 None:intergenic 20.0%
!! TAAACACTTTCTTTAACTAA+AGG + chr1_1:78208534-78208553 None:intergenic 20.0%
!! AATTAATGATCAAAACTCTA+AGG + chr1_1:78208859-78208878 None:intergenic 20.0%
!! ACAAAATAATTTGAGCAAAA+AGG + chr1_1:78208902-78208921 None:intergenic 20.0%
!! TCTTGCAATTAAATTCATAA+TGG + chr1_1:78208965-78208984 None:intergenic 20.0%
!! TTAATTTAAAAACAAGGAAG+GGG + chr1_1:78209103-78209122 None:intergenic 20.0%
!! TTGTATGAAAACCTAAATAT+AGG - chr1_1:78209351-78209370 Msa0046160:intron 20.0%
!! AAAATTGAATCTCTCAAAAA+TGG - chr1_1:78209425-78209444 Msa0046160:intron 20.0%
!! GAAACTAAAACATAATGAAA+AGG - chr1_1:78209447-78209466 Msa0046160:intron 20.0%
!! AACTAAAACATAATGAAAAG+GGG - chr1_1:78209449-78209468 Msa0046160:intron 20.0%
!! GTAATTGTGAAAGTTATAAA+TGG + chr1_1:78209481-78209500 None:intergenic 20.0%
!! GGATGAAAATTATAAAATAC+TGG + chr1_1:78209596-78209615 None:intergenic 20.0%
!!! AATCATTGTATTTTGCTTTT+TGG - chr1_1:78210286-78210305 Msa0046160:intron 20.0%
!! TGATATAACCTGTTATATAT+AGG + chr1_1:78210734-78210753 None:intergenic 20.0%
!! AAGGAGAAAATTACAAATTT+AGG + chr1_1:78211901-78211920 None:intergenic 20.0%
!!! AAATTTGTAATTTTCTCCTT+TGG - chr1_1:78211901-78211920 Msa0046160:intron 20.0%
!! AAAATTTGAACCAATTGAAA+GGG + chr1_1:78212237-78212256 None:intergenic 20.0%
!!! TTTCAATTGGTTCAAATTTT+CGG - chr1_1:78212237-78212256 Msa0046160:intron 20.0%
!! AGAAGAAAACAAAAATCAAT+TGG + chr1_1:78212334-78212353 None:intergenic 20.0%
!!! CTAAACATGTTATTCTTTTA+AGG - chr1_1:78212584-78212603 Msa0046160:intron 20.0%
!!! TATATTTTTGTCAGACTTAA+AGG + chr1_1:78212628-78212647 None:intergenic 20.0%
!!! ACGTTTTTTAAGTTTCAAAT+AGG + chr1_1:78212782-78212801 None:intergenic 20.0%
!! ATATAAAGAGAAAAAAGCAA+TGG + chr1_1:78212925-78212944 None:intergenic 20.0%
!! TACAACTCAAATTTAAACTT+TGG + chr1_1:78213495-78213514 None:intergenic 20.0%
!!! AAAGTTTAAATTTGAGTTGT+AGG - chr1_1:78213494-78213513 Msa0046160:intron 20.0%
!! TCAAATCAAAATATCAAACT+GGG + chr1_1:78213701-78213720 None:intergenic 20.0%
!! ACATAGGAAGAAAAAAAAAA+CGG + chr1_1:78214730-78214749 None:intergenic 20.0%
!! TTATTAAATCTTGTCTTACA+TGG - chr1_1:78214858-78214877 Msa0046160:CDS 20.0%
!! TATTAAATCTTGTCTTACAT+GGG - chr1_1:78214859-78214878 Msa0046160:CDS 20.0%
!!! TATTTCCTTAATTTTTCTTG+AGG - chr1_1:78215029-78215048 Msa0046160:intron 20.0%
!! AAAAAAAAAAGAACAAATCC+AGG + chr1_1:78215247-78215266 None:intergenic 20.0%
!!! TTTTAAACTAAGCATTAGTT+TGG - chr1_1:78216471-78216490 Msa0046160:five_prime_UTR 20.0%
!!! ATTTTTATCAAATAAGAGTG+GGG + chr1_1:78216600-78216619 None:intergenic 20.0%
!!! CATTTTTATCAAATAAGAGT+GGG + chr1_1:78216601-78216620 None:intergenic 20.0%
!!! TCATTTTTATCAAATAAGAG+TGG + chr1_1:78216602-78216621 None:intergenic 20.0%
! TTGCAATAAAATTAGGAATG+CGG + chr1_1:78204498-78204517 None:intergenic 25.0%
! TAAAGAGATTGAGAATTTGT+CGG - chr1_1:78204794-78204813 Msa0046160:CDS 25.0%
!!! TGGTATAATGTACTGATTTT+AGG - chr1_1:78204943-78204962 Msa0046160:intron 25.0%
!!! GGTATAATGTACTGATTTTA+GGG - chr1_1:78204944-78204963 Msa0046160:intron 25.0%
! CTGTATTGAATTTATTATCC+CGG - chr1_1:78205018-78205037 Msa0046160:intron 25.0%
! TAATCTCCAGAATTAAAAAC+CGG + chr1_1:78205040-78205059 None:intergenic 25.0%
!! TTTGGTGATAACTGAATTAT+CGG - chr1_1:78205126-78205145 Msa0046160:intron 25.0%
! GACACAGAGAAAAAATTAAT+TGG + chr1_1:78205175-78205194 None:intergenic 25.0%
! AGTGAGAGTAATATATCAAT+GGG + chr1_1:78205309-78205328 None:intergenic 25.0%
! GTATAACTAAGAGACATATT+TGG + chr1_1:78205433-78205452 None:intergenic 25.0%
! GTATAACTAAGAGACATATT+TGG + chr1_1:78205433-78205452 None:intergenic 25.0%
!!! GTTATACTACCAATTTGTTT+TGG - chr1_1:78205481-78205500 Msa0046160:intron 25.0%
! TCTCACATATTAAGAAAAAG+TGG + chr1_1:78205579-78205598 None:intergenic 25.0%
!!! TACCAATGGGTTATATAAAT+AGG - chr1_1:78205603-78205622 Msa0046160:CDS 25.0%
!!! ACCAATGGGTTATATAAATA+GGG - chr1_1:78205604-78205623 Msa0046160:CDS 25.0%
! AACAAACAGCTAATATAAGA+TGG + chr1_1:78205765-78205784 None:intergenic 25.0%
!!! GTTTGTTTTCATTATTCTAC+TGG - chr1_1:78205778-78205797 Msa0046160:intron 25.0%
! TATTATGATTCTGATATTGG+AGG - chr1_1:78205817-78205836 Msa0046160:intron 25.0%
! TGCACAGAATAAATCATAAT+TGG + chr1_1:78205982-78206001 None:intergenic 25.0%
!! ACCTTCATGTAATCATTTTA+TGG - chr1_1:78206571-78206590 Msa0046160:intron 25.0%
! ACCATAAAATGATTACATGA+AGG + chr1_1:78206575-78206594 None:intergenic 25.0%
!! ACATGTATGTGATATTTTAC+TGG - chr1_1:78206809-78206828 Msa0046160:intron 25.0%
! TATATAAGTGTATTCGTCAT+TGG - chr1_1:78206853-78206872 Msa0046160:CDS 25.0%
! CTATGAATTCATGAAATACT+TGG - chr1_1:78207176-78207195 Msa0046160:intron 25.0%
! AAATTCACAAGATAAACTCT+AGG + chr1_1:78207275-78207294 None:intergenic 25.0%
! ATATGTTTACCTTGTTCTTT+AGG - chr1_1:78207362-78207381 Msa0046160:intron 25.0%
!!! CTAAGTTTTATGGTTTTATC+CGG - chr1_1:78207518-78207537 Msa0046160:intron 25.0%
! ACTCATTTAAATAACATGTG+TGG - chr1_1:78207644-78207663 Msa0046160:intron 25.0%
!! AAGAAAGAGCATAAATAAAC+AGG + chr1_1:78208490-78208509 None:intergenic 25.0%
! GTTCTTAAAACCCTAAAAAT+AGG - chr1_1:78208565-78208584 Msa0046160:intron 25.0%
!! TTTTCGACCTATTTTCTTTA+AGG - chr1_1:78208680-78208699 Msa0046160:intron 25.0%
! TTGATAAATGTCAGAATGTT+GGG + chr1_1:78208792-78208811 None:intergenic 25.0%
! TTTGATAAATGTCAGAATGT+TGG + chr1_1:78208793-78208812 None:intergenic 25.0%
!!! AACTTTTAAAGCCTGTAAAA+TGG + chr1_1:78209148-78209167 None:intergenic 25.0%
!!! TTTTTTTTTTCTCTCTCTGT+AGG - chr1_1:78209273-78209292 Msa0046160:intron 25.0%
! ATGAAAACCTAAATATAGGA+AGG - chr1_1:78209355-78209374 Msa0046160:intron 25.0%
!!! ACTGACAACTTTTTTTGAAA+GGG + chr1_1:78209527-78209546 None:intergenic 25.0%
!!! AACTGACAACTTTTTTTGAA+AGG + chr1_1:78209528-78209547 None:intergenic 25.0%
! AAAAAAGTTGTCAGTTGTAA+TGG - chr1_1:78209532-78209551 Msa0046160:intron 25.0%
! TTAGTTGAGATATCTACTAA+CGG + chr1_1:78209712-78209731 None:intergenic 25.0%
!!! AATGGTGGTTATTTCATTTT+TGG - chr1_1:78209763-78209782 Msa0046160:intron 25.0%
!! ATAGTGTTCTCTCTTAATTT+TGG - chr1_1:78210021-78210040 Msa0046160:intron 25.0%
!!! GGCTCTAAAATAGAAATAAT+TGG - chr1_1:78210100-78210119 Msa0046160:intron 25.0%
! GTCTCTTGACTATAAAAATT+AGG + chr1_1:78210254-78210273 None:intergenic 25.0%
! TACAATGATTTCAACGAATA+TGG + chr1_1:78210276-78210295 None:intergenic 25.0%
! TATGTATATAAGAACCTACA+CGG + chr1_1:78210534-78210553 None:intergenic 25.0%
! ACAAGAGGTAATTTAGTTAT+TGG + chr1_1:78210568-78210587 None:intergenic 25.0%
! ACTCTTCCATTAATAATGAA+AGG + chr1_1:78210614-78210633 None:intergenic 25.0%
! ATTGAATAGAGACGAAAATA+TGG + chr1_1:78210914-78210933 None:intergenic 25.0%
!!! GCATTTAGGAACTTTAAAAT+TGG + chr1_1:78210939-78210958 None:intergenic 25.0%
! AATCTCAGTTATTTGCATTT+AGG + chr1_1:78210953-78210972 None:intergenic 25.0%
!!! TAATTTTGTTTGGAGTTGAT+AGG + chr1_1:78211027-78211046 None:intergenic 25.0%
! CATCAAAATGGAAAAATTAC+TGG + chr1_1:78211147-78211166 None:intergenic 25.0%
!! CAGTAATTTTTCCATTTTGA+TGG - chr1_1:78211145-78211164 Msa0046160:intron 25.0%
!!! TAATTTTTCCATTTTGATGG+AGG - chr1_1:78211148-78211167 Msa0046160:intron 25.0%
! AAAAATTAATTGACCATCTG+TGG - chr1_1:78211268-78211287 Msa0046160:intron 25.0%
!! AAATGAGGGTTTAATTTAAG+AGG - chr1_1:78211814-78211833 Msa0046160:intron 25.0%
! GTTATGTTATACCATATGAA+TGG - chr1_1:78211840-78211859 Msa0046160:intron 25.0%
!! ATTCTCCGTTGATTAAATTA+AGG + chr1_1:78212017-78212036 None:intergenic 25.0%
! GAAAATTTGAACCAATTGAA+AGG + chr1_1:78212238-78212257 None:intergenic 25.0%
!!! TTCAATTGGTTCAAATTTTC+GGG - chr1_1:78212238-78212257 Msa0046160:intron 25.0%
!!! CAAGATTATCTTTTTTCTGT+TGG + chr1_1:78212399-78212418 None:intergenic 25.0%
! CAGTTTCTTCATAAAGAAAA+TGG + chr1_1:78212446-78212465 None:intergenic 25.0%
! TTTCTTTATGAAGAAACTGT+TGG - chr1_1:78212447-78212466 Msa0046160:CDS 25.0%
!! ATTACAGATTCTACAGATTT+TGG - chr1_1:78212496-78212515 Msa0046160:intron 25.0%
! TTTCAAATAGGTCCTTAAAA+GGG + chr1_1:78212676-78212695 None:intergenic 25.0%
! ATTTCAAATAGGTCCTTAAA+AGG + chr1_1:78212677-78212696 None:intergenic 25.0%
! GCATCAAATTAACAACTTAA+AGG - chr1_1:78212725-78212744 Msa0046160:intron 25.0%
! AAAAACGTAAAAGACTAACT+CGG - chr1_1:78212794-78212813 Msa0046160:intron 25.0%
!!! GGTATTTTTGTCAAACTTAA+AGG - chr1_1:78212815-78212834 Msa0046160:intron 25.0%
!! AGAAGGCTAAATACTTATTT+TGG + chr1_1:78212842-78212861 None:intergenic 25.0%
! AAGTTATTACACACAGATTA+AGG - chr1_1:78213030-78213049 Msa0046160:intron 25.0%
! AAATTAACCCTATCAACTAT+TGG - chr1_1:78213091-78213110 Msa0046160:intron 25.0%
! AGTGTACTAGTAATAATTAG+AGG - chr1_1:78213164-78213183 Msa0046160:intron 25.0%
! GTGTACTAGTAATAATTAGA+GGG - chr1_1:78213165-78213184 Msa0046160:intron 25.0%
! AAGTGGTTAAATATTGTGAT+TGG + chr1_1:78213435-78213454 None:intergenic 25.0%
! AAACTTTAACTCATGAAAAG+TGG + chr1_1:78213452-78213471 None:intergenic 25.0%
!!! GAAATTATCTTTTTTCTTGG+CGG - chr1_1:78213628-78213647 Msa0046160:intron 25.0%
! GTCAAATCAAAATATCAAAC+TGG + chr1_1:78213702-78213721 None:intergenic 25.0%
!!! TTTTAACAGTCTTGATGATT+GGG + chr1_1:78214103-78214122 None:intergenic 25.0%
! AATAATACTGAGTATATAGG+AGG + chr1_1:78214223-78214242 None:intergenic 25.0%
! GTGAATAATACTGAGTATAT+AGG + chr1_1:78214226-78214245 None:intergenic 25.0%
!!! TTTTTTGTGAAGTGATGAAT+TGG - chr1_1:78214582-78214601 Msa0046160:intron 25.0%
!! AAAGTGCAATTTTTCCATTA+GGG + chr1_1:78215221-78215240 None:intergenic 25.0%
!!! AAAAGTGCAATTTTTCCATT+AGG + chr1_1:78215222-78215241 None:intergenic 25.0%
!! TAATCTGAAACAAGAAAACA+TGG + chr1_1:78215450-78215469 None:intergenic 25.0%
! AAGAAAGAAAATACAAAACC+TGG + chr1_1:78215536-78215555 None:intergenic 25.0%
! TTCTTTCTTACTAACTATGT+CGG - chr1_1:78215547-78215566 Msa0046160:intron 25.0%
!!! TGGTTTTAACAGGTATTATT+AGG + chr1_1:78215669-78215688 None:intergenic 25.0%
! ATATTGTAGATTAAGAGAGA+CGG + chr1_1:78215760-78215779 None:intergenic 25.0%
!!! TTTCCATTTAACTTGCTTAT+CGG - chr1_1:78215779-78215798 Msa0046160:intron 25.0%
! AACAGAGGAAATTAATGATT+GGG - chr1_1:78216123-78216142 Msa0046160:intron 25.0%
! CTTGAAAAAGAATTTGTATC+TGG - chr1_1:78216157-78216176 Msa0046160:intron 25.0%
! TAGATAAATCTGTAAGCTAT+AGG - chr1_1:78216298-78216317 Msa0046160:CDS 25.0%
! TTTAATCTTTACAGATGCAA+AGG + chr1_1:78216358-78216377 None:intergenic 25.0%
!! ATGATTTGTAATGATTAGCA+TGG - chr1_1:78216441-78216460 Msa0046160:five_prime_UTR 25.0%
!! TTATCTAGTAGTCTGTTTTA+CGG + chr1_1:78216565-78216584 None:intergenic 25.0%
CAGATACAGATAGATACTAT+AGG - chr1_1:78204201-78204220 Msa0046160:three_prime_UTR 30.0%
AATTTACAATGCGATCATGA+AGG + chr1_1:78204475-78204494 None:intergenic 30.0%
AAAGAGATTGAGAATTTGTC+GGG - chr1_1:78204795-78204814 Msa0046160:CDS 30.0%
AAATAAGACGATTGCATACA+GGG + chr1_1:78204918-78204937 None:intergenic 30.0%
AAAATAAGACGATTGCATAC+AGG + chr1_1:78204919-78204938 None:intergenic 30.0%
!!! GCAATCGTCTTATTTTAGTT+TGG - chr1_1:78204923-78204942 Msa0046160:intron 30.0%
! TTGCAATTTACCGAAGTTTT+TGG - chr1_1:78204977-78204996 Msa0046160:intron 30.0%
CATATAACCTCCAAAAACTT+CGG + chr1_1:78204990-78205009 None:intergenic 30.0%
!! ATTATCCCGGTTTTTAATTC+TGG - chr1_1:78205031-78205050 Msa0046160:intron 30.0%
AATCTCCAGAATTAAAAACC+GGG + chr1_1:78205039-78205058 None:intergenic 30.0%
TGAAAAAACAAGCAGCATTT+CGG + chr1_1:78205099-78205118 None:intergenic 30.0%
CAGAGAAAAAATTAATTGGG+AGG + chr1_1:78205171-78205190 None:intergenic 30.0%
CAGTGAGAGTAATATATCAA+TGG + chr1_1:78205310-78205329 None:intergenic 30.0%
! ACAAAGGGGTCTTATAATTA+GGG + chr1_1:78205334-78205353 None:intergenic 30.0%
! GAGACATATTTGGAACAAAT+TGG + chr1_1:78205458-78205477 None:intergenic 30.0%
!! ATATGTGAGAAAAGTACCAA+TGG - chr1_1:78205589-78205608 Msa0046160:CDS 30.0%
!! TATGTGAGAAAAGTACCAAT+GGG - chr1_1:78205590-78205609 Msa0046160:CDS 30.0%
!! CCAATGGGTTATATAAATAG+GGG - chr1_1:78205605-78205624 Msa0046160:CDS 30.0%
GTTATATAAATAGGGGCTAA+GGG - chr1_1:78205612-78205631 Msa0046160:CDS 30.0%
ACTTTAAATCGTGAATGCAA+TGG - chr1_1:78205736-78205755 Msa0046160:intron 30.0%
!!! TTATTCTACTGGTTCTTTTC+AGG - chr1_1:78205789-78205808 Msa0046160:intron 30.0%
AAAACATCGCGAAAATTTAG+TGG + chr1_1:78205847-78205866 None:intergenic 30.0%
TTGGTATAACATTATACCAG+CGG + chr1_1:78205963-78205982 None:intergenic 30.0%
ATTAAACAAACAGTGCATCT+TGG + chr1_1:78206060-78206079 None:intergenic 30.0%
CTCTCAAACACATGAAATAT+AGG - chr1_1:78206103-78206122 Msa0046160:intron 30.0%
AGGGAAAAAATATGCTGTAT+TGG + chr1_1:78206135-78206154 None:intergenic 30.0%
GTAGGTATACAGGTTAAAAA+GGG + chr1_1:78206154-78206173 None:intergenic 30.0%
AGTAGGTATACAGGTTAAAA+AGG + chr1_1:78206155-78206174 None:intergenic 30.0%
TACAATACATTTGTGAAGTG+AGG - chr1_1:78206232-78206251 Msa0046160:intron 30.0%
ATATAACACCCAAACTATCT+CGG + chr1_1:78206281-78206300 None:intergenic 30.0%
! ATGATTCTTTTACCATCATG+AGG + chr1_1:78206603-78206622 None:intergenic 30.0%
TGATGGTAAAAGAATCATAC+TGG - chr1_1:78206605-78206624 Msa0046160:intron 30.0%
!! GTTATAATTGCTGATAATGG+AGG - chr1_1:78206642-78206661 Msa0046160:intron 30.0%
ATAGAAAAAAGTTAACCCTG+CGG + chr1_1:78206672-78206691 None:intergenic 30.0%
GTTGATTGCAAATCATAATG+AGG + chr1_1:78206788-78206807 None:intergenic 30.0%
CGAATACACTTATATAACAC+AGG + chr1_1:78206849-78206868 None:intergenic 30.0%
TAGTTTCATCTTCATCTTTG+TGG - chr1_1:78206881-78206900 Msa0046160:CDS 30.0%
!! AAGTACTGGTAAGGATTATT+GGG - chr1_1:78207061-78207080 Msa0046160:intron 30.0%
AAAATACAACTAACCGAAGA+GGG + chr1_1:78207145-78207164 None:intergenic 30.0%
AAAAATACAACTAACCGAAG+AGG + chr1_1:78207146-78207165 None:intergenic 30.0%
TGAATTCATGAAATACTTGG+AGG - chr1_1:78207179-78207198 Msa0046160:intron 30.0%
! ATCTTGTGAATTTTGAGCTT+AGG - chr1_1:78207282-78207301 Msa0046160:intron 30.0%
CGGATAAAACCATAAAACTT+AGG + chr1_1:78207520-78207539 None:intergenic 30.0%
AATCAATTATGAATCACTGC+TGG + chr1_1:78207613-78207632 None:intergenic 30.0%
ATGACACCAGTATAATATGT+AGG - chr1_1:78207739-78207758 Msa0046160:intron 30.0%
CTAGTACCTACATATTATAC+TGG + chr1_1:78207748-78207767 None:intergenic 30.0%
TAGCATTGTGATGATAACTT+TGG - chr1_1:78207777-78207796 Msa0046160:intron 30.0%
AGCATTGTGATGATAACTTT+GGG - chr1_1:78207778-78207797 Msa0046160:intron 30.0%
AACTAGACATGATACTTGTT+TGG - chr1_1:78207971-78207990 Msa0046160:intron 30.0%
ACTAGACATGATACTTGTTT+GGG - chr1_1:78207972-78207991 Msa0046160:intron 30.0%
AATTGATTATAAAGCTGCTG+AGG - chr1_1:78208286-78208305 Msa0046160:CDS 30.0%
!!! TGAAGACAAGCCTATTTTTA+GGG + chr1_1:78208578-78208597 None:intergenic 30.0%
ATAGGTCGAAAATAAAACCT+CGG + chr1_1:78208672-78208691 None:intergenic 30.0%
!! ACCTATTTTCTTTAAGGAAG+AGG - chr1_1:78208686-78208705 Msa0046160:intron 30.0%
ACCTCTTCCTTAAAGAAAAT+AGG + chr1_1:78208690-78208709 None:intergenic 30.0%
TGATAAATGTCAGAATGTTG+GGG + chr1_1:78208791-78208810 None:intergenic 30.0%
! TTTGAGCAAAAAGGTATGAA+AGG + chr1_1:78208893-78208912 None:intergenic 30.0%
! TTTAAAGCCTGTAAAATGGT+TGG + chr1_1:78209144-78209163 None:intergenic 30.0%
CTTCAATCCTTCCTATATTT+AGG + chr1_1:78209365-78209384 None:intergenic 30.0%
CTAAATATAGGAAGGATTGA+AGG - chr1_1:78209363-78209382 Msa0046160:intron 30.0%
TGAAGGAATCTAAACAAGAA+TGG - chr1_1:78209380-78209399 Msa0046160:intron 30.0%
! TTTTTATGATACTAGACTCG+AGG + chr1_1:78209409-78209428 None:intergenic 30.0%
!!! CTGACAACTTTTTTTGAAAG+GGG + chr1_1:78209526-78209545 None:intergenic 30.0%
TAGTTGAGATATCTACTAAC+GGG + chr1_1:78209711-78209730 None:intergenic 30.0%
ATATCTCAACTAATGTAAGC+AGG - chr1_1:78209719-78209738 Msa0046160:intron 30.0%
! TAGAGAAGAACTTTTGTGTT+GGG + chr1_1:78210183-78210202 None:intergenic 30.0%
! GGGTGCTATATATAACAAAT+GGG + chr1_1:78210512-78210531 None:intergenic 30.0%
ATGTATATAAGAACCTACAC+GGG + chr1_1:78210533-78210552 None:intergenic 30.0%
! GTATCAATATTGATGACAAG+AGG + chr1_1:78210583-78210602 None:intergenic 30.0%
TGCCATTGTTAAAATGATCT+CGG - chr1_1:78210655-78210674 Msa0046160:intron 30.0%
! GTTTTCTAAATTCTAGTAGC+TGG + chr1_1:78210824-78210843 None:intergenic 30.0%
! ATCTAAAGCCTAAAGCTATT+TGG + chr1_1:78210860-78210879 None:intergenic 30.0%
!! TTAGGCTTTAGATGAAGTTA+AGG - chr1_1:78210867-78210886 Msa0046160:intron 30.0%
TGGGCAAAAAAATTCATAAG+AGG + chr1_1:78211098-78211117 None:intergenic 30.0%
AGATAATTTGAGAGCTGTTA+TGG - chr1_1:78211196-78211215 Msa0046160:intron 30.0%
! TGGAGACATTCAATTGTTTT+TGG - chr1_1:78211216-78211235 Msa0046160:intron 30.0%
AGAAGACATGATTTAGTGTT+TGG + chr1_1:78211500-78211519 None:intergenic 30.0%
ATTTGACAGACAACAAAAAG+AGG - chr1_1:78211531-78211550 Msa0046160:intron 30.0%
! TCTTTTATCCATCACTTCAA+CGG - chr1_1:78211773-78211792 Msa0046160:intron 30.0%
TGAACACTGTATTGAAAATG+AGG - chr1_1:78211799-78211818 Msa0046160:intron 30.0%
GAACACTGTATTGAAAATGA+GGG - chr1_1:78211800-78211819 Msa0046160:intron 30.0%
GTTATACCATATGAATGGAA+TGG - chr1_1:78211845-78211864 Msa0046160:intron 30.0%
!! TGTGGATTTTGACAATTACA+GGG + chr1_1:78211939-78211958 None:intergenic 30.0%
GAAAATGCTCAATATTACGA+AGG + chr1_1:78211995-78212014 None:intergenic 30.0%
TAAACAAACATGTTCCTGTA+AGG + chr1_1:78212050-78212069 None:intergenic 30.0%
TTGGGGAAAAAACTATATCA+CGG + chr1_1:78212104-78212123 None:intergenic 30.0%
ATACCTTTATCCCTTTCAAT+TGG - chr1_1:78212224-78212243 Msa0046160:intron 30.0%
!! TCAATTGGTTCAAATTTTCG+GGG - chr1_1:78212239-78212258 Msa0046160:intron 30.0%
TATGTCAACTTTGTGTTCAT+AGG - chr1_1:78212298-78212317 Msa0046160:intron 30.0%
TACTATTACTGAAGGATTAG+AGG + chr1_1:78212547-78212566 None:intergenic 30.0%
GGTGAAATTACTATTACTGA+AGG + chr1_1:78212555-78212574 None:intergenic 30.0%
TAATAGTAATTTCACCCTTC+TGG - chr1_1:78212559-78212578 Msa0046160:intron 30.0%
!! TAACGACACTCATTTTGAAA+CGG + chr1_1:78213010-78213029 None:intergenic 30.0%
! ATACACACCAATAGTTGATA+GGG + chr1_1:78213101-78213120 None:intergenic 30.0%
TAAAGTAGAAGATAGTGCTT+TGG - chr1_1:78213137-78213156 Msa0046160:intron 30.0%
AAAGTAGAAGATAGTGCTTT+GGG - chr1_1:78213138-78213157 Msa0046160:intron 30.0%
ACCAAATAAGTTGTTACCTA+CGG - chr1_1:78213378-78213397 Msa0046160:intron 30.0%
GTTGTAGGTTAATACTTCTT+TGG - chr1_1:78213509-78213528 Msa0046160:intron 30.0%
AATCAAAATATCAAACTGGG+CGG + chr1_1:78213698-78213717 None:intergenic 30.0%
AAATTTCTGTATTTGACTGC+TGG + chr1_1:78213829-78213848 None:intergenic 30.0%
TACAGAAATTTATGAGAAGC+AGG - chr1_1:78213838-78213857 Msa0046160:intron 30.0%
!! CTTTTAACAGTCTTGATGAT+TGG + chr1_1:78214104-78214123 None:intergenic 30.0%
AGAAACTATTAGGAAAGACT+TGG + chr1_1:78214426-78214445 None:intergenic 30.0%
! TGACTCTAAGAGAAACTATT+AGG + chr1_1:78214436-78214455 None:intergenic 30.0%
AGGAAGAAAAAAAAAACGGA+GGG + chr1_1:78214726-78214745 None:intergenic 30.0%
TAGGAAGAAAAAAAAAACGG+AGG + chr1_1:78214727-78214746 None:intergenic 30.0%
GTTCCAATATGGTTAATACA+AGG + chr1_1:78214794-78214813 None:intergenic 30.0%
TCACAACAAATGTTCCAATA+TGG + chr1_1:78214805-78214824 None:intergenic 30.0%
TGTCTCCTCAAGAAAAATTA+AGG + chr1_1:78215037-78215056 None:intergenic 30.0%
! TTAATTTTTCTTGAGGAGAC+AGG - chr1_1:78215036-78215055 Msa0046160:intron 30.0%
ATTCACAAGTATTAAGTCCA+AGG - chr1_1:78215090-78215109 Msa0046160:intron 30.0%
! TTTGAGTGATTTTGAATTGC+TGG - chr1_1:78215162-78215181 Msa0046160:intron 30.0%
AGGGGAGAAATAATTTGAAA+AGG + chr1_1:78215202-78215221 None:intergenic 30.0%
! TCAAATTATTTCTCCCCTAA+TGG - chr1_1:78215204-78215223 Msa0046160:intron 30.0%
! AAGTGCAATTTTTCCATTAG+GGG + chr1_1:78215220-78215239 None:intergenic 30.0%
! GAAAAATTGCACTTTTATCC+TGG - chr1_1:78215226-78215245 Msa0046160:intron 30.0%
!!! TTTTTTTCCCTTCAATTCAG+TGG - chr1_1:78215260-78215279 Msa0046160:intron 30.0%
TCTTTCTTACTAACTATGTC+GGG - chr1_1:78215548-78215567 Msa0046160:intron 30.0%
!!! GAAAACAGAATGGTTTTAAC+AGG + chr1_1:78215679-78215698 None:intergenic 30.0%
ATGATAAGATGTTCTTAGCA+GGG + chr1_1:78215704-78215723 None:intergenic 30.0%
TATGATAAGATGTTCTTAGC+AGG + chr1_1:78215705-78215724 None:intergenic 30.0%
TGCTAAGAACATCTTATCAT+AGG - chr1_1:78215704-78215723 Msa0046160:intron 30.0%
!! TTCCATTTAACTTGCTTATC+GGG - chr1_1:78215780-78215799 Msa0046160:intron 30.0%
! ATGAGTTCGTAACTTTTCAA+TGG + chr1_1:78215852-78215871 None:intergenic 30.0%
! AAAGTTACGAACTCATTTTG+AGG - chr1_1:78215856-78215875 Msa0046160:CDS 30.0%
CAACAGAGGAAATTAATGAT+TGG - chr1_1:78216122-78216141 Msa0046160:intron 30.0%
TAAATCTGTAAGCTATAGGT+TGG - chr1_1:78216302-78216321 Msa0046160:CDS 30.0%
TACAAATTCAGTGCTTTACA+GGG + chr1_1:78216400-78216419 None:intergenic 30.0%
TTACAAATTCAGTGCTTTAC+AGG + chr1_1:78216401-78216420 None:intergenic 30.0%
!! GTTTTGCTTCAGTTTTCAAG+AGG + chr1_1:78204161-78204180 None:intergenic 35.0%
!!! ATTTTTTGACGGTGTTAGTG+AGG + chr1_1:78204397-78204416 None:intergenic 35.0%
! AATGCGATCATGAAGGATTT+TGG + chr1_1:78204468-78204487 None:intergenic 35.0%
CCTTAATATCTTCAACAGCA+AGG + chr1_1:78204860-78204879 None:intergenic 35.0%
!! CCTTGCTGTTGAAGATATTA+AGG - chr1_1:78204857-78204876 Msa0046160:CDS 35.0%
GGAAAGTTTCTAACCAAAGA+AGG + chr1_1:78204897-78204916 None:intergenic 35.0%
!! CAATTTACCGAAGTTTTTGG+AGG - chr1_1:78204980-78204999 Msa0046160:intron 35.0%
GATGGAATTCTGACTTTACA+TGG + chr1_1:78205253-78205272 None:intergenic 35.0%
ATATCAATGGGCATGCAAAA+TGG + chr1_1:78205297-78205316 None:intergenic 35.0%
! CACAAAGGGGTCTTATAATT+AGG + chr1_1:78205335-78205354 None:intergenic 35.0%
GACAAACAATTGTCACAAAG+GGG + chr1_1:78205348-78205367 None:intergenic 35.0%
GGACAAACAATTGTCACAAA+GGG + chr1_1:78205349-78205368 None:intergenic 35.0%
TGGACAAACAATTGTCACAA+AGG + chr1_1:78205350-78205369 None:intergenic 35.0%
GTCACTAAATTGCTCGTTTA+TGG + chr1_1:78205534-78205553 None:intergenic 35.0%
CCCCTATTTATATAACCCAT+TGG + chr1_1:78205608-78205627 None:intergenic 35.0%
GGTTATATAAATAGGGGCTA+AGG - chr1_1:78205611-78205630 Msa0046160:CDS 35.0%
! CGATGTTTTTCTTCAAAGTC+AGG - chr1_1:78205858-78205877 Msa0046160:CDS 35.0%
GTAATATCCCGAGATAGTTT+GGG - chr1_1:78206270-78206289 Msa0046160:intron 35.0%
TATAACACCCAAACTATCTC+GGG + chr1_1:78206280-78206299 None:intergenic 35.0%
! TTTTTCCTTCCTGATTGTGT+GGG - chr1_1:78206358-78206377 Msa0046160:intron 35.0%
TTATGGTAGTATCCTCATGA+TGG - chr1_1:78206588-78206607 Msa0046160:intron 35.0%
! TTTGGAGCTTCAATAATCTG+AGG + chr1_1:78206696-78206715 None:intergenic 35.0%
! AAATGGTTTGGACATGTCTA+TGG + chr1_1:78206930-78206949 None:intergenic 35.0%
AGACAAAGCCTATAGGAATA+AGG + chr1_1:78206961-78206980 None:intergenic 35.0%
ATCTTGTAAGCTGCTTACTA+TGG + chr1_1:78207010-78207029 None:intergenic 35.0%
AGTAAGCAGCTTACAAGATT+TGG - chr1_1:78207011-78207030 Msa0046160:intron 35.0%
!! GAAGTACTGGTAAGGATTAT+TGG - chr1_1:78207060-78207079 Msa0046160:intron 35.0%
!! AGTACTGGTAAGGATTATTG+GGG - chr1_1:78207062-78207081 Msa0046160:intron 35.0%
AATATCGGTAGACATAAGTG+AGG + chr1_1:78207088-78207107 None:intergenic 35.0%
AGGTTTGAACTTTGATGCAT+TGG - chr1_1:78207199-78207218 Msa0046160:intron 35.0%
TGAGCTTAGGTATATAGATG+TGG - chr1_1:78207295-78207314 Msa0046160:intron 35.0%
GAGCTTAGGTATATAGATGT+GGG - chr1_1:78207296-78207315 Msa0046160:intron 35.0%
!! ATTGATTTTCAACCCAGTGA+TGG + chr1_1:78207424-78207443 None:intergenic 35.0%
AAATCAATTCTGATCTCGCA+AGG - chr1_1:78207436-78207455 Msa0046160:intron 35.0%
! TGCTAGACACCTAAGTTTTA+TGG - chr1_1:78207508-78207527 Msa0046160:intron 35.0%
!!! GTGTGGCTATTTTTGTAGTA+AGG - chr1_1:78207661-78207680 Msa0046160:intron 35.0%
AGTAAGGACAATGTTGCTAT+AGG - chr1_1:78207677-78207696 Msa0046160:intron 35.0%
GTAAGGACAATGTTGCTATA+GGG - chr1_1:78207678-78207697 Msa0046160:intron 35.0%
!! ACTGGTGTCATATAAGATCA+AGG + chr1_1:78207730-78207749 None:intergenic 35.0%
! TATGTAGGTACTAGCCTATT+AGG - chr1_1:78207754-78207773 Msa0046160:intron 35.0%
TCATCACAATGCTACCTAAT+AGG + chr1_1:78207771-78207790 None:intergenic 35.0%
ATTGTGATGATAACTTTGGG+TGG - chr1_1:78207781-78207800 Msa0046160:intron 35.0%
TCACCTAAATCAATCGTACA+GGG + chr1_1:78207874-78207893 None:intergenic 35.0%
TTCACCTAAATCAATCGTAC+AGG + chr1_1:78207875-78207894 None:intergenic 35.0%
! ACGATTGATTTAGGTGAAAC+TGG - chr1_1:78207877-78207896 Msa0046160:intron 35.0%
TTGATTTAGGTGAAACTGGT+AGG - chr1_1:78207881-78207900 Msa0046160:intron 35.0%
AGTGAGATAACAACTTCACA+GGG - chr1_1:78208251-78208270 Msa0046160:intron 35.0%
TTATTCCAGAGCTTATTGAG+AGG + chr1_1:78208443-78208462 None:intergenic 35.0%
!! CTGAAGACAAGCCTATTTTT+AGG + chr1_1:78208579-78208598 None:intergenic 35.0%
!! TTTAAGGAAGAGGTGTTACT+AGG - chr1_1:78208696-78208715 Msa0046160:intron 35.0%
ACAGAATTCAAGAAGCTATG+TGG + chr1_1:78208731-78208750 None:intergenic 35.0%
ACATAGCTTCTTGAATTCTG+TGG - chr1_1:78208730-78208749 Msa0046160:intron 35.0%
CATAGCTTCTTGAATTCTGT+GGG - chr1_1:78208731-78208750 Msa0046160:intron 35.0%
!!! TTTTTCGAGTTTTGTGAGCA+AGG - chr1_1:78208990-78209009 Msa0046160:intron 35.0%
AGTCAATCACTCGTTAGTAA+AGG + chr1_1:78209032-78209051 None:intergenic 35.0%
TTTAAAAACAAGGAAGGGGA+GGG + chr1_1:78209099-78209118 None:intergenic 35.0%
ATTTAAAAACAAGGAAGGGG+AGG + chr1_1:78209100-78209119 None:intergenic 35.0%
! GATTAGAATTTGTTCCAGAC+TGG - chr1_1:78209179-78209198 Msa0046160:intron 35.0%
!!! GGAGTTTCTTTTGGAATGAT+AGG - chr1_1:78209294-78209313 Msa0046160:intron 35.0%
!!! CTTTTGGAATGATAGGAGAA+AGG - chr1_1:78209301-78209320 Msa0046160:intron 35.0%
!!! TTTTTTGAAAGGGGAAGGAT+TGG + chr1_1:78209517-78209536 None:intergenic 35.0%
!!! CAACTTTTTTTGAAAGGGGA+AGG + chr1_1:78209522-78209541 None:intergenic 35.0%
AAGTTGTCAGTTGTAATGGT+TGG - chr1_1:78209536-78209555 Msa0046160:intron 35.0%
AAATATTGGAGGGGATGATA+AGG + chr1_1:78209617-78209636 None:intergenic 35.0%
ACTATTCGGGAGCAAAATAT+TGG + chr1_1:78209631-78209650 None:intergenic 35.0%
ATCAATAGAACTTGCAATGG+TGG - chr1_1:78209748-78209767 Msa0046160:intron 35.0%
! TAAATAGGTTGACAAGCTGA+AGG - chr1_1:78209909-78209928 Msa0046160:intron 35.0%
! AAAAGCGTATTTCTGACAAC+AGG - chr1_1:78209971-78209990 Msa0046160:intron 35.0%
! CTAGAGAAGAACTTTTGTGT+TGG + chr1_1:78210184-78210203 None:intergenic 35.0%
CAACACAAAAGTTCTTCTCT+AGG - chr1_1:78210182-78210201 Msa0046160:intron 35.0%
TTGCTTGCATAATCTCTATG+TGG - chr1_1:78210469-78210488 Msa0046160:intron 35.0%
! GGGGTGCTATATATAACAAA+TGG + chr1_1:78210513-78210532 None:intergenic 35.0%
TGTATATAAGAACCTACACG+GGG + chr1_1:78210532-78210551 None:intergenic 35.0%
GCCATTGTTAAAATGATCTC+GGG - chr1_1:78210656-78210675 Msa0046160:intron 35.0%
TAGTTACCCCTGATATCTAA+TGG + chr1_1:78210682-78210701 None:intergenic 35.0%
AGTAGACTACTTCTAGTAGA+TGG + chr1_1:78210776-78210795 None:intergenic 35.0%
ACGAAAATATGGCATTTAGG+CGG + chr1_1:78210903-78210922 None:intergenic 35.0%
GAGACGAAAATATGGCATTT+AGG + chr1_1:78210906-78210925 None:intergenic 35.0%
GCAAATAACTGAGATTTCCA+TGG - chr1_1:78210957-78210976 Msa0046160:intron 35.0%
! TGTAGCATCACACTGTTTTA+CGG + chr1_1:78210996-78211015 None:intergenic 35.0%
!!! ATTTTTTTGCCCACATTACG+TGG - chr1_1:78211105-78211124 Msa0046160:intron 35.0%
!!! TTTTTTTGCCCACATTACGT+GGG - chr1_1:78211106-78211125 Msa0046160:intron 35.0%
!! TTTTTCCATTTTGATGGAGG+AGG - chr1_1:78211151-78211170 Msa0046160:intron 35.0%
!! TTTTCCATTTTGATGGAGGA+GGG - chr1_1:78211152-78211171 Msa0046160:intron 35.0%
!!! TTGTTTTTGGCTCAAAAACG+AGG - chr1_1:78211229-78211248 Msa0046160:intron 35.0%
GTGTCAAATTCTAGTCAATC+CGG - chr1_1:78211306-78211325 Msa0046160:intron 35.0%
AAGAAAAATAAGACCCTGCA+CGG + chr1_1:78211454-78211473 None:intergenic 35.0%
TTAAAAGTTCGCGTGACTAA+AGG - chr1_1:78211559-78211578 Msa0046160:intron 35.0%
! TTTGATGATTGTACATGACC+AGG - chr1_1:78211689-78211708 Msa0046160:intron 35.0%
!! CTGTGGATTTTGACAATTAC+AGG + chr1_1:78211940-78211959 None:intergenic 35.0%
GAATATCCTTAATGCCTTAC+AGG - chr1_1:78212033-78212052 Msa0046160:intron 35.0%
CACGGAAAAGATACATATCA+TGG + chr1_1:78212086-78212105 None:intergenic 35.0%
AAAAAGAACACCCAAGTGAT+GGG + chr1_1:78212143-78212162 None:intergenic 35.0%
TCATTCGCTTATAATGCAGA+AGG - chr1_1:78212180-78212199 Msa0046160:intron 35.0%
GAACCAATTGAAAGGGATAA+AGG + chr1_1:78212230-78212249 None:intergenic 35.0%
!! CAATTGGTTCAAATTTTCGG+GGG - chr1_1:78212240-78212259 Msa0046160:intron 35.0%
!! GGGGATGAATTTAAGTTTTG+TGG - chr1_1:78212266-78212285 Msa0046160:intron 35.0%
!!! TCTTCTTGCCTTTTGTTTTC+AGG - chr1_1:78212348-78212367 Msa0046160:intron 35.0%
TGTCAGTTCCTGAAAACAAA+AGG + chr1_1:78212359-78212378 None:intergenic 35.0%
TCTTGAAGCTGAACTGAAAA+AGG - chr1_1:78212414-78212433 Msa0046160:CDS 35.0%
! TAACATGTTTAGCTCCAGAA+GGG + chr1_1:78212576-78212595 None:intergenic 35.0%
! ATAACATGTTTAGCTCCAGA+AGG + chr1_1:78212577-78212596 None:intergenic 35.0%
! TTAAGGCCAAATACCTCTTT+TGG - chr1_1:78212601-78212620 Msa0046160:intron 35.0%
!! AAAGGACCAAAAGAGGTATT+TGG + chr1_1:78212610-78212629 None:intergenic 35.0%
ACGGACTTAAAGAACTAACA+CGG + chr1_1:78212651-78212670 None:intergenic 35.0%
! TTAAGTCCGTTACCCTTTTA+AGG - chr1_1:78212661-78212680 Msa0046160:intron 35.0%
ATAGGTCCTTAAAAGGGTAA+CGG + chr1_1:78212670-78212689 None:intergenic 35.0%
AAGCAATGGAACAGAATCAA+AGG + chr1_1:78212911-78212930 None:intergenic 35.0%
GATACACACCAATAGTTGAT+AGG + chr1_1:78213102-78213121 None:intergenic 35.0%
AAACGACACTCGTTATGAAA+CGG - chr1_1:78213265-78213284 Msa0046160:CDS 35.0%
! TCGATATGTCTTGTTCTATG+AGG - chr1_1:78213354-78213373 Msa0046160:intron 35.0%
TCCGTAGGTAACAACTTATT+TGG + chr1_1:78213382-78213401 None:intergenic 35.0%
AGTTGAGCATCTGAAGATAA+AGG - chr1_1:78213602-78213621 Msa0046160:intron 35.0%
!! TTAAGCAGCGTTGATTTAAC+AGG + chr1_1:78213659-78213678 None:intergenic 35.0%
! TTGATTTGACCTTGATTGAC+AGG - chr1_1:78213712-78213731 Msa0046160:CDS 35.0%
TTTCATCTTCCTGTCAATCA+AGG + chr1_1:78213724-78213743 None:intergenic 35.0%
AATCAGATGTCATCAAAACG+TGG - chr1_1:78213774-78213793 Msa0046160:intron 35.0%
! TCAACTTTCTGGAAGATACT+TGG - chr1_1:78213798-78213817 Msa0046160:intron 35.0%
! CAACTTTCTGGAAGATACTT+GGG - chr1_1:78213799-78213818 Msa0046160:intron 35.0%
AAATTTATGAGAAGCAGGTC+AGG - chr1_1:78213843-78213862 Msa0046160:intron 35.0%
CATGTTTATTCTGCTGAATC+AGG + chr1_1:78214020-78214039 None:intergenic 35.0%
! AAAAGAGTATAAGCTCTCAG+AGG - chr1_1:78214119-78214138 Msa0046160:intron 35.0%
! AAAGAGTATAAGCTCTCAGA+GGG - chr1_1:78214120-78214139 Msa0046160:intron 35.0%
GATGAGAGGAAAATAGTCTT+GGG + chr1_1:78214194-78214213 None:intergenic 35.0%
AGATGAGAGGAAAATAGTCT+TGG + chr1_1:78214195-78214214 None:intergenic 35.0%
TGATGCTAACTAAATCCAAC+TGG - chr1_1:78214277-78214296 Msa0046160:intron 35.0%
GATGCTAACTAAATCCAACT+GGG - chr1_1:78214278-78214297 Msa0046160:intron 35.0%
AGACTTGGAGATTAATGAGT+TGG + chr1_1:78214411-78214430 None:intergenic 35.0%
GTAAGTAGTAAGAAGCTGAA+TGG + chr1_1:78214638-78214657 None:intergenic 35.0%
CCATTATCTGAATCAGTGAA+GGG + chr1_1:78214674-78214693 None:intergenic 35.0%
!! CCTTCACTGATTCAGATAAT+GGG - chr1_1:78214672-78214691 Msa0046160:intron 35.0%
!! TTCAGATAATGGGTGGAAAA+TGG - chr1_1:78214682-78214701 Msa0046160:intron 35.0%
TGTTTGTCTACAGAAAGAGT+TGG - chr1_1:78214766-78214785 Msa0046160:intron 35.0%
! GAGCCTTGTATTAACCATAT+TGG - chr1_1:78214788-78214807 Msa0046160:intron 35.0%
TTAGCTGGCAATTTCTTTGA+TGG - chr1_1:78214887-78214906 Msa0046160:intron 35.0%
ATATTTGACCTATGAAGCCA+AGG - chr1_1:78215130-78215149 Msa0046160:intron 35.0%
ATTGAAGCCACTGAATTGAA+GGG + chr1_1:78215270-78215289 None:intergenic 35.0%
AATTGAAGCCACTGAATTGA+AGG + chr1_1:78215271-78215290 None:intergenic 35.0%
AAAAGAGTCCACAATATGAC+AGG + chr1_1:78215308-78215327 None:intergenic 35.0%
CAAGAAAACATGGAGAATCA+TGG + chr1_1:78215440-78215459 None:intergenic 35.0%
TATTACCACTTTCAGTGTAG+TGG - chr1_1:78215468-78215487 Msa0046160:intron 35.0%
! AAACTCAAACCTTTTCTCAC+TGG - chr1_1:78215631-78215650 Msa0046160:intron 35.0%
AACCCGATAAGCAAGTTAAA+TGG + chr1_1:78215785-78215804 None:intergenic 35.0%
! TGTCTCTGTCTTTGAAAACT+CGG + chr1_1:78215993-78216012 None:intergenic 35.0%
! GATTTGAGTGAAGGTGATTT+TGG + chr1_1:78216025-78216044 None:intergenic 35.0%
ACTCAAATCAGATCAGGTAT+TGG - chr1_1:78216036-78216055 Msa0046160:intron 35.0%
TACTCAAGATTACTCAACAG+AGG - chr1_1:78216108-78216127 Msa0046160:intron 35.0%
GGTTTCGAAATTGGAATGCA+CGG + chr1_1:78204230-78204249 None:intergenic 40.0%
AGGGTTTGTGGTTTCGAAAT+TGG + chr1_1:78204239-78204258 None:intergenic 40.0%
GCAATGGAAATTAGGGTTTG+TGG + chr1_1:78204251-78204270 None:intergenic 40.0%
GAAGCGTGCAATGGAAATTA+GGG + chr1_1:78204258-78204277 None:intergenic 40.0%
TGAAGCGTGCAATGGAAATT+AGG + chr1_1:78204259-78204278 None:intergenic 40.0%
ATGACATGGTTTCGATACAG+AGG + chr1_1:78204322-78204341 None:intergenic 40.0%
!!! GGTGTCGGCATATTTTTTGA+CGG + chr1_1:78204408-78204427 None:intergenic 40.0%
TGCACAGACAGTCAAAAGAT+TGG - chr1_1:78204704-78204723 Msa0046160:CDS 40.0%
ATTGTGTTACCTCAGTTCTC+AGG - chr1_1:78205648-78205667 Msa0046160:intron 40.0%
! TAGTTTTCACCTGAGAACTG+AGG + chr1_1:78205660-78205679 None:intergenic 40.0%
! TTTTCTTCAAAGTCAGGCAC+TGG - chr1_1:78205864-78205883 Msa0046160:CDS 40.0%
! GGAGGGTATAACACTATCAA+TGG - chr1_1:78205885-78205904 Msa0046160:CDS 40.0%
TGTGCATAGACTAGACCTAT+GGG - chr1_1:78205996-78206015 Msa0046160:intron 40.0%
TACGGTAGTAGTAGGTATAC+AGG + chr1_1:78206164-78206183 None:intergenic 40.0%
TTCAAGAAGTCCTGGCAAAA+AGG - chr1_1:78206188-78206207 Msa0046160:intron 40.0%
TCAAGAAGTCCTGGCAAAAA+GGG - chr1_1:78206189-78206208 Msa0046160:intron 40.0%
AGTGAGGCATGACATTAACT+TGG - chr1_1:78206248-78206267 Msa0046160:intron 40.0%
GGTAATATCCCGAGATAGTT+TGG - chr1_1:78206269-78206288 Msa0046160:intron 40.0%
! CTTTTTCCTTCCTGATTGTG+TGG - chr1_1:78206357-78206376 Msa0046160:intron 40.0%
GATTATTGAAGCTCCAAACG+AGG - chr1_1:78206698-78206717 Msa0046160:intron 40.0%
! TCCTATAGGCTTTGTCTTAC+TGG - chr1_1:78206964-78206983 Msa0046160:intron 40.0%
! CCTATAGGCTTTGTCTTACT+GGG - chr1_1:78206965-78206984 Msa0046160:intron 40.0%
AAGCTACCAAGATGAAGTAC+TGG - chr1_1:78207047-78207066 Msa0046160:intron 40.0%
!! ACCAAGATGAAGTACTGGTA+AGG - chr1_1:78207052-78207071 Msa0046160:intron 40.0%
TCCTTACCAGTACTTCATCT+TGG + chr1_1:78207056-78207075 None:intergenic 40.0%
! TATGTTTTCTCCTCCCTCTT+CGG - chr1_1:78207129-78207148 Msa0046160:CDS 40.0%
GAACTTACTAGATGCGTGAA+TGG + chr1_1:78207340-78207359 None:intergenic 40.0%
ACTTAGGTGTCTAGCAGAAA+TGG + chr1_1:78207504-78207523 None:intergenic 40.0%
TATGAATCACTGCTGGAGAA+AGG + chr1_1:78207606-78207625 None:intergenic 40.0%
ATGTTGCTATAGGGAACATC+AGG - chr1_1:78207687-78207706 Msa0046160:intron 40.0%
! AACCCCTGTACGATTGATTT+AGG - chr1_1:78207868-78207887 Msa0046160:intron 40.0%
CACCTAAATCAATCGTACAG+GGG + chr1_1:78207873-78207892 None:intergenic 40.0%
AGGTAACAGTTATGTTTCCC+AGG - chr1_1:78207901-78207920 Msa0046160:intron 40.0%
AGACATGATACTTGTTTGGG+TGG - chr1_1:78207975-78207994 Msa0046160:intron 40.0%
ATGATACTTGTTTGGGTGGA+GGG - chr1_1:78207979-78207998 Msa0046160:intron 40.0%
CGTATAGCGGTATGAGTATT+GGG + chr1_1:78208034-78208053 None:intergenic 40.0%
ACGTATAGCGGTATGAGTAT+TGG + chr1_1:78208035-78208054 None:intergenic 40.0%
CCTTAACAGATGACGTATAG+CGG + chr1_1:78208047-78208066 None:intergenic 40.0%
CGCTATACGTCATCTGTTAA+GGG - chr1_1:78208045-78208064 Msa0046160:intron 40.0%
TACGTCATCTGTTAAGGGTT+CGG - chr1_1:78208050-78208069 Msa0046160:intron 40.0%
CAAAGCAATCTTTCCCTGAA+TGG + chr1_1:78208082-78208101 None:intergenic 40.0%
ATTATGCCCTCTTGTCCAAT+CGG - chr1_1:78208104-78208123 Msa0046160:intron 40.0%
! TTGGTAATCATGGATCCGAT+TGG + chr1_1:78208122-78208141 None:intergenic 40.0%
CAGTGAGATAACAACTTCAC+AGG - chr1_1:78208250-78208269 Msa0046160:intron 40.0%
GTGAGATAACAACTTCACAG+GGG - chr1_1:78208252-78208271 Msa0046160:intron 40.0%
TGAGATAACAACTTCACAGG+GGG - chr1_1:78208253-78208272 Msa0046160:intron 40.0%
TACAACAGAACACACCTGTA+GGG + chr1_1:78208324-78208343 None:intergenic 40.0%
TTACAACAGAACACACCTGT+AGG + chr1_1:78208325-78208344 None:intergenic 40.0%
AATAAAGGGCAACAGGAAGA+AGG + chr1_1:78208348-78208367 None:intergenic 40.0%
CTGACAAAATAAAGGGCAAC+AGG + chr1_1:78208355-78208374 None:intergenic 40.0%
GTTAACCTCTCAATAAGCTC+TGG - chr1_1:78208435-78208454 Msa0046160:intron 40.0%
TTAAAAACAAGGAAGGGGAG+GGG + chr1_1:78209098-78209117 None:intergenic 40.0%
! TAACCAGCCAACCATTTTAC+AGG - chr1_1:78209134-78209153 Msa0046160:CDS 40.0%
!! CAGGCTTTAAAAGTTGCACT+CGG - chr1_1:78209153-78209172 Msa0046160:intron 40.0%
! AGAATTTGTTCCAGACTGGA+AGG - chr1_1:78209183-78209202 Msa0046160:intron 40.0%
! CTCTCTGTAGGAGTTTCTTT+TGG - chr1_1:78209285-78209304 Msa0046160:intron 40.0%
! AAGGATTGGCAACTAGAGAA+GGG + chr1_1:78209503-78209522 None:intergenic 40.0%
TGGCTAATGTTTGCTCTGTT+TGG + chr1_1:78209576-78209595 None:intergenic 40.0%
TTCGGGAGCAAAATATTGGA+GGG + chr1_1:78209627-78209646 None:intergenic 40.0%
ATTCGGGAGCAAAATATTGG+AGG + chr1_1:78209628-78209647 None:intergenic 40.0%
TCGGCAGTTTGCATACTATT+CGG + chr1_1:78209645-78209664 None:intergenic 40.0%
! CACCTGGTATTTTCGTTGTT+CGG + chr1_1:78209664-78209683 None:intergenic 40.0%
CGAAAATACCAGGTGTCTTA+AGG - chr1_1:78209669-78209688 Msa0046160:intron 40.0%
AAATACCAGGTGTCTTAAGG+AGG - chr1_1:78209672-78209691 Msa0046160:intron 40.0%
AATACCAGGTGTCTTAAGGA+GGG - chr1_1:78209673-78209692 Msa0046160:intron 40.0%
TCTACTAACGGGATTATCAG+TGG + chr1_1:78209700-78209719 None:intergenic 40.0%
TCAACTAATGTAAGCAGGAG+TGG - chr1_1:78209724-78209743 Msa0046160:intron 40.0%
CAACTAATGTAAGCAGGAGT+GGG - chr1_1:78209725-78209744 Msa0046160:intron 40.0%
GGGATCAATAGAACTTGCAA+TGG - chr1_1:78209745-78209764 Msa0046160:intron 40.0%
TGACAAGCTGAAGGTCTTAA+CGG - chr1_1:78209918-78209937 Msa0046160:intron 40.0%
TCTTGCTAACAAGTTCCCTA+AGG - chr1_1:78210066-78210085 Msa0046160:intron 40.0%
CTTGCTAACAAGTTCCCTAA+GGG - chr1_1:78210067-78210086 Msa0046160:intron 40.0%
CTTCTTAACAAGTGCCCTTA+GGG - chr1_1:78210205-78210224 Msa0046160:intron 40.0%
TTATATATAGCACCCCGTGT+AGG - chr1_1:78210517-78210536 Msa0046160:intron 40.0%
!! GCCCGAGATCATTTTAACAA+TGG + chr1_1:78210660-78210679 None:intergenic 40.0%
AGTGAGAGATTGGGAGTAAT+CGG - chr1_1:78210701-78210720 Msa0046160:intron 40.0%
! GACACTGGCCTATATATAAC+AGG - chr1_1:78210723-78210742 Msa0046160:CDS 40.0%
GCAGAAGTCCAAATAGCTTT+AGG - chr1_1:78210849-78210868 Msa0046160:intron 40.0%
AACTGAGATTTCCATGGACA+CGG - chr1_1:78210963-78210982 Msa0046160:intron 40.0%
GACTAGAATTTGACACTGAC+AGG + chr1_1:78211302-78211321 None:intergenic 40.0%
CAGCTTATGTAGATGAAACC+AGG - chr1_1:78211422-78211441 Msa0046160:intron 40.0%
TGACAGACAACAAAAAGAGG+AGG - chr1_1:78211534-78211553 Msa0046160:intron 40.0%
TGAAACTGGTGAAAAGGAGA+AGG - chr1_1:78211585-78211604 Msa0046160:intron 40.0%
CAAGCATAACAATAACAGCC+TGG + chr1_1:78211710-78211729 None:intergenic 40.0%
GTTCATTACCGTTGAAGTGA+TGG + chr1_1:78211784-78211803 None:intergenic 40.0%
! GCAAGAATTGGTTTAAGCTG+TGG + chr1_1:78211957-78211976 None:intergenic 40.0%
! CATGTTCCTGTAAGGCATTA+AGG + chr1_1:78212042-78212061 None:intergenic 40.0%
GTGTAGCGTGAACAAATTTG+GGG + chr1_1:78212121-78212140 None:intergenic 40.0%
GGTGTAGCGTGAACAAATTT+GGG + chr1_1:78212122-78212141 None:intergenic 40.0%
GAAAAAGAACACCCAAGTGA+TGG + chr1_1:78212144-78212163 None:intergenic 40.0%
TTCGCTTATAATGCAGAAGG+TGG - chr1_1:78212183-78212202 Msa0046160:intron 40.0%
TCGCTTATAATGCAGAAGGT+GGG - chr1_1:78212184-78212203 Msa0046160:intron 40.0%
CAGACTTAAAGGACCAAAAG+AGG + chr1_1:78212617-78212636 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+CGG + chr1_1:78213006-78213025 None:intergenic 40.0%
AAGTTGTTACCTACGGAGTT+TGG - chr1_1:78213385-78213404 Msa0046160:intron 40.0%
AGTTGTTACCTACGGAGTTT+GGG - chr1_1:78213386-78213405 Msa0046160:intron 40.0%
GATTGTTTGCTTCCTCAAAC+TGG + chr1_1:78213578-78213597 None:intergenic 40.0%
CAAAACGTGGATCAACTTTC+TGG - chr1_1:78213787-78213806 Msa0046160:intron 40.0%
TTCTGCTGAATCAGGTCTAT+CGG + chr1_1:78214012-78214031 None:intergenic 40.0%
! AGGAAAATAGTCTTGGGTTG+GGG + chr1_1:78214188-78214207 None:intergenic 40.0%
! GAGGAAAATAGTCTTGGGTT+GGG + chr1_1:78214189-78214208 None:intergenic 40.0%
! AGAGGAAAATAGTCTTGGGT+TGG + chr1_1:78214190-78214209 None:intergenic 40.0%
! CCATCAACGGGAAATTTGTT+GGG + chr1_1:78214251-78214270 None:intergenic 40.0%
ACCATCAACGGGAAATTTGT+TGG + chr1_1:78214252-78214271 None:intergenic 40.0%
TAGAGACTGAGAATATGTGG+TGG + chr1_1:78214473-78214492 None:intergenic 40.0%
CTGTAGAGACTGAGAATATG+TGG + chr1_1:78214476-78214495 None:intergenic 40.0%
CACATATTCTCAGTCTCTAC+AGG - chr1_1:78214474-78214493 Msa0046160:intron 40.0%
CTCTACAGGTATCTTTCTAC+CGG - chr1_1:78214488-78214507 Msa0046160:intron 40.0%
! CGAGGACTATTTTGTGAACT+TGG - chr1_1:78214612-78214631 Msa0046160:intron 40.0%
TCAGCTTCTTACTACTTACC+AGG - chr1_1:78214639-78214658 Msa0046160:intron 40.0%
AGTGAAGGGAAGTAAATACC+TGG + chr1_1:78214660-78214679 None:intergenic 40.0%
!! CCCTTCACTGATTCAGATAA+TGG - chr1_1:78214671-78214690 Msa0046160:intron 40.0%
CCCATTATCTGAATCAGTGA+AGG + chr1_1:78214675-78214694 None:intergenic 40.0%
!! TCACTGATTCAGATAATGGG+TGG - chr1_1:78214675-78214694 Msa0046160:intron 40.0%
GCGTAGGTCATATTACACAT+AGG + chr1_1:78214746-78214765 None:intergenic 40.0%
TTTCTGTAGACAAACAGCGT+AGG + chr1_1:78214762-78214781 None:intergenic 40.0%
ACCTCAAGAATTTGACTCAG+AGG - chr1_1:78214825-78214844 Msa0046160:CDS 40.0%
ACCTCTGAGTCAAATTCTTG+AGG + chr1_1:78214829-78214848 None:intergenic 40.0%
AAGTCCAAGGAGAAATCTTG+AGG - chr1_1:78215103-78215122 Msa0046160:intron 40.0%
TCTTCCTCAAGATTTCTCCT+TGG + chr1_1:78215110-78215129 None:intergenic 40.0%
TCTCATTACCTTGGCTTCAT+AGG + chr1_1:78215141-78215160 None:intergenic 40.0%
CACTCAAAGTCTCATTACCT+TGG + chr1_1:78215150-78215169 None:intergenic 40.0%
AACACTGTCCTGTCATATTG+TGG - chr1_1:78215297-78215316 Msa0046160:intron 40.0%
CAGCAAGCAACAGATATTGA+GGG + chr1_1:78215404-78215423 None:intergenic 40.0%
ACAGCAAGCAACAGATATTG+AGG + chr1_1:78215405-78215424 None:intergenic 40.0%
GTTATCCACTACACTGAAAG+TGG + chr1_1:78215476-78215495 None:intergenic 40.0%
!! ACAGCAGTTTTATGCTCAAC+AGG - chr1_1:78215501-78215520 Msa0046160:intron 40.0%
!! CAGCAGTTTTATGCTCAACA+GGG - chr1_1:78215502-78215521 Msa0046160:intron 40.0%
CTCAACAGGGAAATATTTCC+AGG - chr1_1:78215515-78215534 Msa0046160:intron 40.0%
TAGCAGGGAAGAAAACAGAA+TGG + chr1_1:78215689-78215708 None:intergenic 40.0%
AACTCTCTCTTCATCTTTCC+TGG + chr1_1:78215813-78215832 None:intergenic 40.0%
!!! CTCATTTTGAGGCTATAGAG+AGG - chr1_1:78215867-78215886 Msa0046160:CDS 40.0%
ATGTTTCAGTCTTCACAGGT+GGG + chr1_1:78215913-78215932 None:intergenic 40.0%
AATGTTTCAGTCTTCACAGG+TGG + chr1_1:78215914-78215933 None:intergenic 40.0%
GGTAATGTTTCAGTCTTCAC+AGG + chr1_1:78215917-78215936 None:intergenic 40.0%
!! CCATCTGACTTTTTCTCAGA+AGG + chr1_1:78215938-78215957 None:intergenic 40.0%
! CCTTCTGAGAAAAAGTCAGA+TGG - chr1_1:78215935-78215954 Msa0046160:CDS 40.0%
! GAGTTTTCAAAGACAGAGAC+AGG - chr1_1:78215992-78216011 Msa0046160:CDS 40.0%
ACCTTCACTCAAATCAGATC+AGG - chr1_1:78216030-78216049 Msa0046160:intron 40.0%
! ACCTGATCTGATTTGAGTGA+AGG + chr1_1:78216034-78216053 None:intergenic 40.0%
TCCAAACTCAGATTCAAGCT+TGG + chr1_1:78216080-78216099 None:intergenic 40.0%
GCTTGAATCTGAGTTTGGAA+AGG - chr1_1:78216081-78216100 Msa0046160:intron 40.0%
ATGAAGCTTGCAAGATCAGA+CGG - chr1_1:78216331-78216350 Msa0046160:CDS 40.0%
GAGAGAAATGAAGCGTGCAA+TGG + chr1_1:78204267-78204286 None:intergenic 45.0%
GTATCGAAACCATGTCATCG+TGG - chr1_1:78204324-78204343 Msa0046160:three_prime_UTR 45.0%
CTAAGCAACTGAACTCTCTC+AGG + chr1_1:78204756-78204775 None:intergenic 45.0%
CTGAGAGAGTTCAGTTGCTT+AGG - chr1_1:78204754-78204773 Msa0046160:CDS 45.0%
GAGTTCAGTTGCTTAGGAGA+TGG - chr1_1:78204760-78204779 Msa0046160:CDS 45.0%
TGAGAATTTGTCGGGAGCTT+CGG - chr1_1:78204803-78204822 Msa0046160:CDS 45.0%
GAATCCACAGAGACCTTCTT+TGG - chr1_1:78204881-78204900 Msa0046160:intron 45.0%
CTAACCAAAGAAGGTCTCTG+TGG + chr1_1:78204888-78204907 None:intergenic 45.0%
! CATGCAAAATGGCTGGTCAA+AGG + chr1_1:78205286-78205305 None:intergenic 45.0%
ACCAGCGGAAATTCAGCTTT+CGG + chr1_1:78205948-78205967 None:intergenic 45.0%
CTGTGCATAGACTAGACCTA+TGG - chr1_1:78205995-78206014 Msa0046160:intron 45.0%
! TGAAGCACTACGGTAGTAGT+AGG + chr1_1:78206172-78206191 None:intergenic 45.0%
! CAGGACTTCTTGAAGCACTA+CGG + chr1_1:78206182-78206201 None:intergenic 45.0%
!! TGATAATGGAGGTTAACCGC+AGG - chr1_1:78206653-78206672 Msa0046160:intron 45.0%
!! GATAATGGAGGTTAACCGCA+GGG - chr1_1:78206654-78206673 Msa0046160:intron 45.0%
CCCAGTAAGACAAAGCCTAT+AGG + chr1_1:78206968-78206987 None:intergenic 45.0%
GAAGAGGGAGGAGAAAACAT+AGG + chr1_1:78207130-78207149 None:intergenic 45.0%
ATACAACTAACCGAAGAGGG+AGG + chr1_1:78207142-78207161 None:intergenic 45.0%
CTCGCTTCACCTAAAGAACA+AGG + chr1_1:78207374-78207393 None:intergenic 45.0%
TGTTCTTTAGGTGAAGCGAG+AGG - chr1_1:78207374-78207393 Msa0046160:intron 45.0%
TCGCAAGGTCAGTACAAAAC+AGG - chr1_1:78207451-78207470 Msa0046160:intron 45.0%
CGCAAGGTCAGTACAAAACA+GGG - chr1_1:78207452-78207471 Msa0046160:intron 45.0%
AAGGTCAGTACAAAACAGGG+AGG - chr1_1:78207455-78207474 Msa0046160:intron 45.0%
AGGTCAGTACAAAACAGGGA+GGG - chr1_1:78207456-78207475 Msa0046160:intron 45.0%
CACTCTTGGAATGTGAACTC+CGG + chr1_1:78207540-78207559 None:intergenic 45.0%
GGAGTTCACATTCCAAGAGT+GGG - chr1_1:78207539-78207558 Msa0046160:intron 45.0%
TCAATCGTACAGGGGTTTGA+TGG + chr1_1:78207865-78207884 None:intergenic 45.0%
CATGATACTTGTTTGGGTGG+AGG - chr1_1:78207978-78207997 Msa0046160:intron 45.0%
CCGCTATACGTCATCTGTTA+AGG - chr1_1:78208044-78208063 Msa0046160:intron 45.0%
GCAATCTTTCCCTGAATGGA+CGG + chr1_1:78208078-78208097 None:intergenic 45.0%
ATGGATCCGATTGGACAAGA+GGG + chr1_1:78208113-78208132 None:intergenic 45.0%
! ATGCTGAAGCCTCTAGTCTT+AGG - chr1_1:78208219-78208238 Msa0046160:intron 45.0%
GAGCTTCTTCCTAAGACTAG+AGG + chr1_1:78208231-78208250 None:intergenic 45.0%
ATGTCAGAATGTTGGGGCAA+CGG + chr1_1:78208785-78208804 None:intergenic 45.0%
AAGCCTGTAAAATGGTTGGC+TGG + chr1_1:78209140-78209159 None:intergenic 45.0%
CAGCAATAATCCTTCCAGTC+TGG + chr1_1:78209196-78209215 None:intergenic 45.0%
! GAAGGATTGGCAACTAGAGA+AGG + chr1_1:78209504-78209523 None:intergenic 45.0%
TCGGGAGCAAAATATTGGAG+GGG + chr1_1:78209626-78209645 None:intergenic 45.0%
CGGCAGTTTGCATACTATTC+GGG + chr1_1:78209644-78209663 None:intergenic 45.0%
TGCCGAACAACGAAAATACC+AGG - chr1_1:78209659-78209678 Msa0046160:intron 45.0%
!! TTCCCTAAGGGCACTTGTTA+AGG - chr1_1:78210079-78210098 Msa0046160:intron 45.0%
AGCCTTAACAAGTGCCCTTA+GGG + chr1_1:78210084-78210103 None:intergenic 45.0%
GCTTCTTAACAAGTGCCCTT+AGG - chr1_1:78210204-78210223 Msa0046160:intron 45.0%
AACAAGTGCCCTTAGGGTTA+AGG - chr1_1:78210211-78210230 Msa0046160:intron 45.0%
ACAAGTGCCCTTAGGGTTAA+GGG - chr1_1:78210212-78210231 Msa0046160:intron 45.0%
ACAAGTGCCCTTAACCCTAA+GGG + chr1_1:78210222-78210241 None:intergenic 45.0%
AACAAGTGCCCTTAACCCTA+AGG + chr1_1:78210223-78210242 None:intergenic 45.0%
ATCTCGGGCCATTAGATATC+AGG - chr1_1:78210671-78210690 Msa0046160:intron 45.0%
TCTCGGGCCATTAGATATCA+GGG - chr1_1:78210672-78210691 Msa0046160:intron 45.0%
AGGGGTAACTAGTGAGAGAT+TGG - chr1_1:78210691-78210710 Msa0046160:intron 45.0%
GGGGTAACTAGTGAGAGATT+GGG - chr1_1:78210692-78210711 Msa0046160:intron 45.0%
AAACAGTGTGATGCTACAGC+AGG - chr1_1:78210998-78211017 Msa0046160:intron 45.0%
CATTCAGTATTGCAACCGAC+AGG + chr1_1:78211332-78211351 None:intergenic 45.0%
! CTGTCGGTTGCAATACTGAA+TGG - chr1_1:78211330-78211349 Msa0046160:intron 45.0%
GCACTGGAAACATAAGCACA+AGG + chr1_1:78211396-78211415 None:intergenic 45.0%
ACATAAGCTGAGCAAAGCAC+TGG + chr1_1:78211412-78211431 None:intergenic 45.0%
AAAATAAGACCCTGCACGGT+TGG + chr1_1:78211450-78211469 None:intergenic 45.0%
AAAGTTCGCGTGACTAAAGG+TGG - chr1_1:78211562-78211581 Msa0046160:intron 45.0%
GTGACTAAAGGTGGTGAAAC+TGG - chr1_1:78211571-78211590 Msa0046160:intron 45.0%
AGGTGGTGAAACTGGTGAAA+AGG - chr1_1:78211579-78211598 Msa0046160:intron 45.0%
CGTCTGCCATTCCATTCATA+TGG + chr1_1:78211854-78211873 None:intergenic 45.0%
! AGGGACATGATTTGTGCCAA+AGG + chr1_1:78211920-78211939 None:intergenic 45.0%
GAGAGACGAAACGCAAGAAT+TGG + chr1_1:78211969-78211988 None:intergenic 45.0%
GGGTGTAGCGTGAACAAATT+TGG + chr1_1:78212123-78212142 None:intergenic 45.0%
!! TGGTTCAAATTTTCGGGGGA+TGG - chr1_1:78212244-78212263 Msa0046160:intron 45.0%
!! GGTTCAAATTTTCGGGGGAT+GGG - chr1_1:78212245-78212264 Msa0046160:intron 45.0%
!! GTTCAAATTTTCGGGGGATG+GGG - chr1_1:78212246-78212265 Msa0046160:intron 45.0%
!! TTCAAATTTTCGGGGGATGG+GGG - chr1_1:78212247-78212266 Msa0046160:intron 45.0%
GACACTCGTTATGAAACGGA+GGG - chr1_1:78213269-78213288 Msa0046160:CDS 45.0%
! TGTTTTCACCCAAACTCCGT+AGG + chr1_1:78213397-78213416 None:intergenic 45.0%
ACGGAGTTTGGGTGAAAACA+CGG - chr1_1:78213397-78213416 Msa0046160:intron 45.0%
TCTGCTGAATCAGGTCTATC+GGG + chr1_1:78214011-78214030 None:intergenic 45.0%
! ACAGTCTTGATGATTGGGAC+AGG + chr1_1:78214098-78214117 None:intergenic 45.0%
! TATAAGCTCTCAGAGGGTGT+TGG - chr1_1:78214126-78214145 Msa0046160:intron 45.0%
CCCAACAAATTTCCCGTTGA+TGG - chr1_1:78214248-78214267 Msa0046160:intron 45.0%
AGCATCAGACAGACCATCAA+CGG + chr1_1:78214264-78214283 None:intergenic 45.0%
AGACTGAGAATATGTGGTGG+TGG + chr1_1:78214470-78214489 None:intergenic 45.0%
TGATGAATTGGAGAGACACG+AGG - chr1_1:78214594-78214613 Msa0046160:intron 45.0%
!! GATAATGGGTGGAAAATGGC+AGG - chr1_1:78214686-78214705 Msa0046160:intron 45.0%
! CTTACATGGGCACTTTTAGC+TGG - chr1_1:78214872-78214891 Msa0046160:CDS 45.0%
TGTGTGTGTGTGTGTGTGTT+TGG - chr1_1:78214954-78214973 Msa0046160:intron 45.0%
TGAATCCTCAGTATCTGCAC+TGG + chr1_1:78215075-78215094 None:intergenic 45.0%
! GTGGACTCTTTTGTAGCTGT+TGG - chr1_1:78215316-78215335 Msa0046160:intron 45.0%
CAGATATTGAGGGTCAGACA+TGG + chr1_1:78215394-78215413 None:intergenic 45.0%
TGCTTATCGGGTTCAAATCC+AGG - chr1_1:78215792-78215811 Msa0046160:intron 45.0%
GGGCTCTCTATTTCAAGAAC+TGG + chr1_1:78215893-78215912 None:intergenic 45.0%
GCTTGGCTAATTCAGCTTCA+TGG + chr1_1:78216063-78216082 None:intergenic 45.0%
GCCAAGCTTGAATCTGAGTT+TGG - chr1_1:78216076-78216095 Msa0046160:intron 45.0%
TGAAGCTTGCAAGATCAGAC+GGG - chr1_1:78216332-78216351 Msa0046160:CDS 45.0%
! TCTGTTTTACGGTTCCTTCC+AGG + chr1_1:78216554-78216573 None:intergenic 45.0%
!!! ATATTTTTTTTTTTTTTTTG+TGG - chr1_1:78204649-78204668 Msa0046160:CDS 5.0%
!!! TGAGGCGTTTTTCAGGCACT+GGG + chr1_1:78204125-78204144 None:intergenic 50.0%
!!! ATGAGGCGTTTTTCAGGCAC+TGG + chr1_1:78204126-78204145 None:intergenic 50.0%
!! ACGTCGATGAGGCGTTTTTC+AGG + chr1_1:78204132-78204151 None:intergenic 50.0%
AGAGGATGAAGACGTCGATG+AGG + chr1_1:78204143-78204162 None:intergenic 50.0%
GGATCTTAGCCACGATGACA+TGG + chr1_1:78204336-78204355 None:intergenic 50.0%
!! TTGACCGGCTTGTTGAACGA+CGG + chr1_1:78204429-78204448 None:intergenic 50.0%
!! GATTTTGGCGCCTTCAGCAA+CGG + chr1_1:78204453-78204472 None:intergenic 50.0%
! GCAAAATGGCTGGTCAAAGG+AGG + chr1_1:78205283-78205302 None:intergenic 50.0%
CAATGGGCATGCAAAATGGC+TGG + chr1_1:78205293-78205312 None:intergenic 50.0%
!! TCTTCAAAGTCAGGCACTGG+AGG - chr1_1:78205867-78205886 Msa0046160:CDS 50.0%
!! CTTCAAAGTCAGGCACTGGA+GGG - chr1_1:78205868-78205887 Msa0046160:CDS 50.0%
GCATAGACTAGACCTATGGG+TGG - chr1_1:78205999-78206018 Msa0046160:intron 50.0%
GGTGAACAAACACCACCCAT+AGG + chr1_1:78206014-78206033 None:intergenic 50.0%
CAGTGCATCTTGGTTCCTGT+GGG + chr1_1:78206050-78206069 None:intergenic 50.0%
ACAGTGCATCTTGGTTCCTG+TGG + chr1_1:78206051-78206070 None:intergenic 50.0%
CGTAGTGCTTCAAGAAGTCC+TGG - chr1_1:78206180-78206199 Msa0046160:intron 50.0%
CTTCCTGATTGTGTGGGAGA+GGG - chr1_1:78206364-78206383 Msa0046160:intron 50.0%
ATTCCCTCTCCCACACAATC+AGG + chr1_1:78206370-78206389 None:intergenic 50.0%
TGAAGCTCCAAACGAGGAAG+AGG - chr1_1:78206704-78206723 Msa0046160:intron 50.0%
AGGGAAACCTCTTCCTCGTT+TGG + chr1_1:78206714-78206733 None:intergenic 50.0%
TCCCTTCTCCTGGAGATGTT+TGG - chr1_1:78206729-78206748 Msa0046160:intron 50.0%
CCCAAACATCTCCAGGAGAA+GGG + chr1_1:78206733-78206752 None:intergenic 50.0%
CCCTTCTCCTGGAGATGTTT+GGG - chr1_1:78206730-78206749 Msa0046160:intron 50.0%
ACCCAAACATCTCCAGGAGA+AGG + chr1_1:78206734-78206753 None:intergenic 50.0%
AGACTCACCCAAACATCTCC+AGG + chr1_1:78206740-78206759 None:intergenic 50.0%
TTTGCACAACGTGCCATCAC+TGG - chr1_1:78207408-78207427 Msa0046160:intron 50.0%
TTGCACAACGTGCCATCACT+GGG - chr1_1:78207409-78207428 Msa0046160:intron 50.0%
CGGAGTTCACATTCCAAGAG+TGG - chr1_1:78207538-78207557 Msa0046160:intron 50.0%
CAACACAATCTGCCCACTCT+TGG + chr1_1:78207554-78207573 None:intergenic 50.0%
CATGGATCCGATTGGACAAG+AGG + chr1_1:78208114-78208133 None:intergenic 50.0%
GGAAACAGAAGCAACCCTAC+AGG - chr1_1:78208307-78208326 Msa0046160:CDS 50.0%
CATTCAATGTGCTTCTGCCG+AGG - chr1_1:78208652-78208671 Msa0046160:intron 50.0%
TGTCAGAATGTTGGGGCAAC+GGG + chr1_1:78208784-78208803 None:intergenic 50.0%
AAGCAATGGAGACTCTCCTG+AGG - chr1_1:78209230-78209249 Msa0046160:intron 50.0%
TCCTGAGGTTCATGCCCAAA+AGG - chr1_1:78209245-78209264 Msa0046160:intron 50.0%
! ACCTTTTGGGCATGAACCTC+AGG + chr1_1:78209249-78209268 None:intergenic 50.0%
GAGCCTTAACAAGTGCCCTT+AGG + chr1_1:78210085-78210104 None:intergenic 50.0%
CTCGGGCCATTAGATATCAG+GGG - chr1_1:78210673-78210692 Msa0046160:intron 50.0%
GATTGGGAGTAATCGGACAC+TGG - chr1_1:78210708-78210727 Msa0046160:intron 50.0%
ACGGTGTATATCCGTGTCCA+TGG + chr1_1:78210977-78210996 None:intergenic 50.0%
TTGCCCACATTACGTGGGTA+TGG - chr1_1:78211111-78211130 Msa0046160:intron 50.0%
TGCCCACATTACGTGGGTAT+GGG - chr1_1:78211112-78211131 Msa0046160:intron 50.0%
CACCCATACCCACGTAATGT+GGG + chr1_1:78211117-78211136 None:intergenic 50.0%
TCACCCATACCCACGTAATG+TGG + chr1_1:78211118-78211137 None:intergenic 50.0%
!! TCCATTTTGATGGAGGAGGG+TGG - chr1_1:78211155-78211174 Msa0046160:intron 50.0%
ACCACCCTCCTCCATCAAAA+TGG + chr1_1:78211159-78211178 None:intergenic 50.0%
ACAGGCAGTATTGCCACAGA+TGG + chr1_1:78211284-78211303 None:intergenic 50.0%
TTCTAGTCAATCCGGCCTGT+CGG - chr1_1:78211314-78211333 Msa0046160:intron 50.0%
TTCACGCTACACCCATCACT+TGG - chr1_1:78212129-78212148 Msa0046160:intron 50.0%
TCACGCTACACCCATCACTT+GGG - chr1_1:78212130-78212149 Msa0046160:intron 50.0%
CGACACTCGTTATGAAACGG+AGG - chr1_1:78213268-78213287 Msa0046160:CDS 50.0%
GAGTTTGGGTGAAAACACGG+TGG - chr1_1:78213400-78213419 Msa0046160:intron 50.0%
AAGCACGATTGTGGAACGTG+AGG - chr1_1:78213541-78213560 Msa0046160:intron 50.0%
AGCACGATTGTGGAACGTGA+GGG - chr1_1:78213542-78213561 Msa0046160:intron 50.0%
GGAAGAGAGAGACCAGTTTG+AGG - chr1_1:78213563-78213582 Msa0046160:intron 50.0%
!! TAGTCTTGGGTTGGGGTCAT+TGG + chr1_1:78214181-78214200 None:intergenic 50.0%
ATAGGAGGCAGCAAGATGAG+AGG + chr1_1:78214208-78214227 None:intergenic 50.0%
GCATCAGACAGACCATCAAC+GGG + chr1_1:78214263-78214282 None:intergenic 50.0%
AACGTGACTACAGTCCCAGT+TGG + chr1_1:78214295-78214314 None:intergenic 50.0%
! GGACAAGGCTTGGTTGTTGT+TGG + chr1_1:78214322-78214341 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG - chr1_1:78214330-78214349 Msa0046160:intron 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG - chr1_1:78214331-78214350 Msa0046160:intron 50.0%
TGTAGCCAACCCCACTTAGT+GGG + chr1_1:78214343-78214362 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG + chr1_1:78214344-78214363 None:intergenic 50.0%
!! ACTAAGTGGGGTTGGCTACA+TGG - chr1_1:78214343-78214362 Msa0046160:intron 50.0%
!! CTGAGAATATGTGGTGGTGG+TGG + chr1_1:78214467-78214486 None:intergenic 50.0%
GACAACCAGTGCAGATACTG+AGG - chr1_1:78215067-78215086 Msa0046160:intron 50.0%
GACTCACGACCAGTGAGAAA+AGG + chr1_1:78215643-78215662 None:intergenic 50.0%
CCAACTGAAGCAGAAGGTGA+AGG + chr1_1:78215965-78215984 None:intergenic 50.0%
CCTTCACCTTCTGCTTCAGT+TGG - chr1_1:78215962-78215981 Msa0046160:CDS 50.0%
TCACCTTCTGCTTCAGTTGG+AGG - chr1_1:78215965-78215984 Msa0046160:CDS 50.0%
GTACCTCCAACTGAAGCAGA+AGG + chr1_1:78215971-78215990 None:intergenic 50.0%
GCTAATATGCCATACGCTCC+TGG - chr1_1:78216533-78216552 Msa0046160:five_prime_UTR 50.0%
ATATGCCATACGCTCCTGGA+AGG - chr1_1:78216537-78216556 Msa0046160:five_prime_UTR 50.0%
!!! GAGGCGTTTTTCAGGCACTG+GGG + chr1_1:78204124-78204143 None:intergenic 55.0%
!! GACCTCGACGGCTTTGTTGA+CGG + chr1_1:78204360-78204379 None:intergenic 55.0%
GTCAACAAAGCCGTCGAGGT+CGG - chr1_1:78204359-78204378 Msa0046160:three_prime_UTR 55.0%
GTTCTTGTTGCCGACCTCGA+CGG + chr1_1:78204372-78204391 None:intergenic 55.0%
!! GGCTTGTTGAACGACGGTGT+CGG + chr1_1:78204423-78204442 None:intergenic 55.0%
GACACCGTCGTTCAACAAGC+CGG - chr1_1:78204422-78204441 Msa0046160:three_prime_UTR 55.0%
GAAGCTGCTATCTCGCATCG+AGG - chr1_1:78204729-78204748 Msa0046160:CDS 55.0%
GTCAAAGGAGGTCTGGCTGA+TGG + chr1_1:78205271-78205290 None:intergenic 55.0%
! ATGGCTGGTCAAAGGAGGTC+TGG + chr1_1:78205278-78205297 None:intergenic 55.0%
GCCGAAAGCTGAATTTCCGC+TGG - chr1_1:78205944-78205963 Msa0046160:intron 55.0%
CCTGTGGGAGGGAAGAACTA+AGG + chr1_1:78206035-78206054 None:intergenic 55.0%
! CCTTAGTTCTTCCCTCCCAC+AGG - chr1_1:78206032-78206051 Msa0046160:intron 55.0%
GCATCTTGGTTCCTGTGGGA+GGG + chr1_1:78206046-78206065 None:intergenic 55.0%
TGCATCTTGGTTCCTGTGGG+AGG + chr1_1:78206047-78206066 None:intergenic 55.0%
! CTGTCTGCACCCTTTTTGCC+AGG + chr1_1:78206201-78206220 None:intergenic 55.0%
CCTCTCCCACACAATCAGGA+AGG + chr1_1:78206366-78206385 None:intergenic 55.0%
CCTTCCTGATTGTGTGGGAG+AGG - chr1_1:78206363-78206382 Msa0046160:intron 55.0%
GGAAGAGGTTTCCCTTCTCC+TGG - chr1_1:78206719-78206738 Msa0046160:intron 55.0%
! GTACAGGGGTTTGATGGCAG+AGG + chr1_1:78207859-78207878 None:intergenic 55.0%
ACTTGTTTGGGTGGAGGGTG+TGG - chr1_1:78207984-78208003 Msa0046160:intron 55.0%
CAACGGGTGTGAATGGAGAG+AGG + chr1_1:78208768-78208787 None:intergenic 55.0%
TGGTCCCTCCTTAAGACACC+TGG + chr1_1:78209680-78209699 None:intergenic 55.0%
CAGTATTGCAACCGACAGGC+CGG + chr1_1:78211328-78211347 None:intergenic 55.0%
AAACCAGGAACCAACCGTGC+AGG - chr1_1:78211437-78211456 Msa0046160:CDS 55.0%
AACCAGGAACCAACCGTGCA+GGG - chr1_1:78211438-78211457 Msa0046160:CDS 55.0%
CTGCTGCTCAAGCACGATTG+TGG - chr1_1:78213532-78213551 Msa0046160:intron 55.0%
!! CAGGTCTATCGGGTGGACTA+TGG + chr1_1:78214001-78214020 None:intergenic 55.0%
GCTGAATCAGGTCTATCGGG+TGG + chr1_1:78214008-78214027 None:intergenic 55.0%
!! GCTCTCAGAGGGTGTTGGAA+AGG - chr1_1:78214131-78214150 Msa0046160:intron 55.0%
! TGGGTTGGGGTCATTGGCAA+TGG + chr1_1:78214175-78214194 None:intergenic 55.0%
CCACTTAGTGGGACAAGGCT+TGG + chr1_1:78214332-78214351 None:intergenic 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG - chr1_1:78214329-78214348 Msa0046160:intron 55.0%
CAACCCCACTTAGTGGGACA+AGG + chr1_1:78214337-78214356 None:intergenic 55.0%
CTTGTCCCACTAAGTGGGGT+TGG - chr1_1:78214335-78214354 Msa0046160:intron 55.0%
!! CTCGACGGCTTTGTTGACGG+CGG + chr1_1:78204357-78204376 None:intergenic 60.0%
GCCTTCAGCAACGGCTTGAC+CGG + chr1_1:78204444-78204463 None:intergenic 60.0%
TTGTCGGGAGCTTCGGCTGA+AGG - chr1_1:78204810-78204829 Msa0046160:CDS 60.0%
! AGGGGTTTGATGGCAGAGGC+GGG + chr1_1:78207855-78207874 None:intergenic 60.0%
! CAGGGGTTTGATGGCAGAGG+CGG + chr1_1:78207856-78207875 None:intergenic 60.0%
!! GGTTCGGTGCCGTCCATTCA+GGG - chr1_1:78208066-78208085 Msa0046160:intron 60.0%
GTTGGGGCAACGGGTGTGAA+TGG + chr1_1:78208775-78208794 None:intergenic 60.0%
! CGGTTCCTTCCAGGAGCGTA+TGG + chr1_1:78216545-78216564 None:intergenic 60.0%
CGCCGTCAACAAAGCCGTCG+AGG - chr1_1:78204355-78204374 Msa0046160:three_prime_UTR 65.0%
GCCGGTCAAGCCGTTGCTGA+AGG - chr1_1:78204440-78204459 Msa0046160:three_prime_UTR 65.0%
! GGTGGAGGGTGTGGCAGTGT+GGG - chr1_1:78207993-78208012 Msa0046160:intron 65.0%
! GTGGAGGGTGTGGCAGTGTG+GGG - chr1_1:78207994-78208013 Msa0046160:intron 65.0%
! TGGAGGGTGTGGCAGTGTGG+GGG - chr1_1:78207995-78208014 Msa0046160:intron 65.0%
!! GGGTTCGGTGCCGTCCATTC+AGG - chr1_1:78208065-78208084 Msa0046160:intron 65.0%
! GACCCTGCACGGTTGGTTCC+TGG + chr1_1:78211443-78211462 None:intergenic 65.0%
! GGGTGGAGGGTGTGGCAGTG+TGG - chr1_1:78207992-78208011 Msa0046160:intron 70.0%
AGGGTGTGGCAGTGTGGGGG+TGG - chr1_1:78207998-78208017 Msa0046160:intron 70.0%
GGGTGTGGCAGTGTGGGGGT+GGG - chr1_1:78207999-78208018 Msa0046160:intron 70.0%
GGTGTGGCAGTGTGGGGGTG+GGG - chr1_1:78208000-78208019 Msa0046160:intron 70.0%
GTGGCAGTGTGGGGGTGGGG+TGG - chr1_1:78208003-78208022 Msa0046160:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78204074 78216629 78204074 ID=Msa0046160;Name=Msa0046160
chr1_1 mRNA 78204074 78216629 78204074 ID=Msa0046160-mRNA-1;Parent=Msa0046160;Name=Msa0046160-mRNA-1;_AED=0.11;_eAED=0.11;_QI=261|1|1|1|1|1|18|437|682
chr1_1 exon 78204074 78204889 78204074 ID=Msa0046160-mRNA-1:exon:26948;Parent=Msa0046160-mRNA-1
chr1_1 exon 78205167 78205237 78205167 ID=Msa0046160-mRNA-1:exon:26947;Parent=Msa0046160-mRNA-1
chr1_1 exon 78205552 78205645 78205552 ID=Msa0046160-mRNA-1:exon:26946;Parent=Msa0046160-mRNA-1
chr1_1 exon 78205857 78205924 78205857 ID=Msa0046160-mRNA-1:exon:26945;Parent=Msa0046160-mRNA-1
chr1_1 exon 78206043 78206109 78206043 ID=Msa0046160-mRNA-1:exon:26944;Parent=Msa0046160-mRNA-1
chr1_1 exon 78206839 78206969 78206839 ID=Msa0046160-mRNA-1:exon:26943;Parent=Msa0046160-mRNA-1
chr1_1 exon 78207080 78207187 78207080 ID=Msa0046160-mRNA-1:exon:26942;Parent=Msa0046160-mRNA-1
chr1_1 exon 78208268 78208333 78208268 ID=Msa0046160-mRNA-1:exon:26941;Parent=Msa0046160-mRNA-1
chr1_1 exon 78209097 78209163 78209097 ID=Msa0046160-mRNA-1:exon:26940;Parent=Msa0046160-mRNA-1
chr1_1 exon 78210711 78210787 78210711 ID=Msa0046160-mRNA-1:exon:26939;Parent=Msa0046160-mRNA-1
chr1_1 exon 78211437 78211547 78211437 ID=Msa0046160-mRNA-1:exon:26938;Parent=Msa0046160-mRNA-1
chr1_1 exon 78212375 78212489 78212375 ID=Msa0046160-mRNA-1:exon:26937;Parent=Msa0046160-mRNA-1
chr1_1 exon 78213246 78213319 78213246 ID=Msa0046160-mRNA-1:exon:26936;Parent=Msa0046160-mRNA-1
chr1_1 exon 78213635 78213731 78213635 ID=Msa0046160-mRNA-1:exon:26935;Parent=Msa0046160-mRNA-1
chr1_1 exon 78213952 78214004 78213952 ID=Msa0046160-mRNA-1:exon:26934;Parent=Msa0046160-mRNA-1
chr1_1 exon 78214797 78214892 78214797 ID=Msa0046160-mRNA-1:exon:26933;Parent=Msa0046160-mRNA-1
chr1_1 exon 78215801 78216022 78215801 ID=Msa0046160-mRNA-1:exon:26932;Parent=Msa0046160-mRNA-1
chr1_1 exon 78216216 78216629 78216216 ID=Msa0046160-mRNA-1:exon:26931;Parent=Msa0046160-mRNA-1
chr1_1 five_prime_UTR 78216369 78216629 78216369 ID=Msa0046160-mRNA-1:five_prime_utr;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78216216 78216368 78216216 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78215801 78216022 78215801 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78214797 78214892 78214797 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78213952 78214004 78213952 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78213635 78213731 78213635 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78213246 78213319 78213246 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78212375 78212489 78212375 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78211437 78211547 78211437 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78210711 78210787 78210711 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78209097 78209163 78209097 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78208268 78208333 78208268 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78207080 78207187 78207080 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78206839 78206969 78206839 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78206043 78206109 78206043 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78205857 78205924 78205857 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78205552 78205645 78205552 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78205167 78205237 78205167 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 CDS 78204511 78204889 78204511 ID=Msa0046160-mRNA-1:cds;Parent=Msa0046160-mRNA-1
chr1_1 three_prime_UTR 78204074 78204510 78204074 ID=Msa0046160-mRNA-1:three_prime_utr;Parent=Msa0046160-mRNA-1
Gene Sequence

>Msa0046160

ATGTCATCGTGGCTAAGATCCGCCGTCAACAAAGCCGTCGAGGTCGGCAACAAGAACAACCTCACTAACACCGTCAAAAAATATGCCGACACCGTCGTTCAACAAGCCGGTCAAGCCGTTGCTGAAGGCGCCAAAATCCTTCATGATCGCATTTCAGCTAGAAACTATAGAAGTGTTGCACAGACAGTCAAAAGATTGGAAGAAGCTGCTATCTCGCATCGAGGACCTGAGAGAGTTCAGTTGCTTAGGAGATGGCTTGTTGTTCTTAAAGAGATTGAGAATTTGTCGGGAGCTTCGGCTGAAGGTAAAGAGAAGACTCTCGAGCAGCACCTTGCTGTTGAAGATATTAAGGAGAATCCACAGAGACCTTCTTTGGTTCTTTATTATGATTCTGATATTGGAGGAGAACCACTAAATTTTCGCGATGTTTTTCTTCAAAGTCAGGCACTGGAGGGTATAACACTATCAATGATTATTGAAGCTCCAAACGAGGAAGAGGTTTCCCTTCTCCTGGAGATGTTTGGGCTTTGTCTTACTGGGAGAAAAGAAGTTCATAATGCCATAGTAAGCAGCTTACAAGATTTGGCAACAGCGTTTTCAAGCTACCAAGATGAAGTACTGGTGAAGCGAGAGGAATTGCTTCAGTTTGCACAACGTGCCATCACTGGGTTGAAAATCAATTCTGATCTCGCAAGAATAGATGCTGAAGCCTCTAGTCTTAGGAAGAAGCTCAGTGAGATAACAACTTCACAGGGGGTTGTGAATAAAATTGATTATAAAGCTGCTGAGGAAACAGAAGCAACCCTACAGGCTTTAAAAGTTGCACTCGGACAGATTAGAATTTGTTCCAGACTGGAAGGATTATTGCTGAAGAAAAAAAATATAAGCAATGGAGACTCTCCTGAGGTTCATGCCCAAAAGGTTGACAAGCTGAAGGTCTTAACGGAATCTCTTGTTAACTCTGCTGCAAAAGCTGAAAAGCGTATTTCTGACAACAGACAACAAAAAGAGGAGGCATTAAAAGTTCGCGTGACTAAAGGTGGTGAAACTGGTGAAAAGGAGAAGGAACTGACAGCTGAGATATCTGAACTCCAACAGAAAAAAGATAATCTTGAAGCTGAACTGAAAAAGGTTAATACTTCTTTGGCTGCTGCTCAAGCACGATTGTGGAACGTGAGGGAAGAGAGAGACCAGTTTGAGGAAGCAAACAATCAGATAGTTGAGCATCTGAAGATAAAGGAAGATGAAATTACGAAATCAATTAGCTCATGTCGAGTAGAATCAGATGTCATCAAAACGTGGATCAACTTTCTGGAAGATACTTGGGTTCTCCAGCAGTCAAATACAGAAATTTATGAGAAGCAGGTCAGTGATGAATTGGAGAGACACGAGGACTATTTTGTGAACTTGGCCATTCAGCTTCTTACTACTTACCAGAAAGAGTTGGAGCCTTGTATTAACCATATTGGAACATTTGTTGTGAACCTCAAGAATTTGACTCAGAGGTTAGAAATGACAACCAGTGCAGATACTGAGGATTCACAAGTATTAAGTCCAAGGAGAAATCTTGAGGAAGAATATTTGACCTATGAAGCCAAGATTATTACCACTTTCAGTGTAGTGGATAACATGAAACAGCAGTTTTATGCTCAACAGGGAAATATTTCCAGGAAAGATGAAGAGAGAGTTAAAGAGCTGTTTGATGCCATTGAAAAGTTACGAACTCATTTTGAGGCTATAGAGAGGCCAGTTCTTGAAATAGAGAGCCCACCTGTGAAGACTGAAACATTACCTTCTGAGAAAAAGTCAGATGGCACACCTTCACCTTCTGCTTCAGTTGGAGGTACCGAGTTTTCAAAGACAGAGACAGGTGAACAGCCAAAATCACCTTCACTCAAATCAGATCAGGTATTGGACCATGAAGCTGAATTAGCCAAGCTTGAATCTGAGTTTGGAAAGGTTAGTACTCAAGATTACTCAACAGAGGAAATTAATGATTGGGAATTTGATGAGCTTGAAAAAGAATTTGTATCTGGTAGCAACAAGTGA

Protein sequence

>Msa0046160

MSSWLRSAVNKAVEVGNKNNLTNTVKKYADTVVQQAGQAVAEGAKILHDRISARNYRSVAQTVKRLEEAAISHRGPERVQLLRRWLVVLKEIENLSGASAEGKEKTLEQHLAVEDIKENPQRPSLVLYYDSDIGGEPLNFRDVFLQSQALEGITLSMIIEAPNEEEVSLLLEMFGLCLTGRKEVHNAIVSSLQDLATAFSSYQDEVLVKREELLQFAQRAITGLKINSDLARIDAEASSLRKKLSEITTSQGVVNKIDYKAAEETEATLQALKVALGQIRICSRLEGLLLKKKNISNGDSPEVHAQKVDKLKVLTESLVNSAAKAEKRISDNRQQKEEALKVRVTKGGETGEKEKELTAEISELQQKKDNLEAELKKVNTSLAAAQARLWNVREERDQFEEANNQIVEHLKIKEDEITKSISSCRVESDVIKTWINFLEDTWVLQQSNTEIYEKQVSDELERHEDYFVNLAIQLLTTYQKELEPCINHIGTFVVNLKNLTQRLEMTTSADTEDSQVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYAQQGNISRKDEERVKELFDAIEKLRTHFEAIERPVLEIESPPVKTETLPSEKKSDGTPSPSASVGGTEFSKTETGEQPKSPSLKSDQVLDHEAELAKLESEFGKVSTQDYSTEEINDWEFDELEKEFVSGSNK*