AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330420 MtrunA17_Chr4g0058731 46.919 211 28 2 2 167 165 336 5.48e-52 169
Msa1330420 MtrunA17_Chr3g0117251 42.381 210 37 2 3 167 1 171 1.84e-45 147
Msa1330420 MtrunA17_Chr8g0388831 27.315 216 75 3 2 172 152 330 1.12e-17 78.6
Msa1330420 MtrunA17_Chr7g0262941 29.341 167 74 1 42 164 153 319 2.85e-15 72.0
Msa1330420 MtrunA17_Chr1g0182541 32.653 147 52 3 63 164 174 318 2.10e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330420 AT5G50130.7 34.597 211 55 3 2 167 120 292 1.74e-29 110
Msa1330420 AT5G50130.1 34.597 211 55 3 2 167 153 325 3.17e-29 110
Msa1330420 AT5G50130.8 33.649 211 56 2 2 167 120 291 3.73e-29 109
Msa1330420 AT4G24050.1 28.774 212 67 5 7 172 156 329 1.02e-16 76.3
Msa1330420 AT5G02540.1 33.621 116 33 1 86 157 195 310 4.47e-14 68.9
Msa1330420 AT2G37540.1 33.537 164 96 6 3 157 151 310 1.70e-12 64.7
Msa1330420 AT1G64590.1 24.378 201 70 3 8 163 157 320 9.87e-12 62.4

Find 79 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTAATTTCTTTCATTTAA+TGG 0.081513 8_4:+49566022 Msa1330420:five_prime_UTR
ATTGCAGGGCCTAGTGGTTT+TGG 0.230469 8_4:+49562741 Msa1330420:five_prime_UTR
CATTCACCCCTTCTATTTGT+TGG 0.248389 8_4:-49567735 None:intergenic
ACACTTACATGAGAATATTA+AGG 0.272671 8_4:-49563263 None:intergenic
GAAGGGAACAATAAGGTATT+TGG 0.288975 8_4:+49562713 Msa1330420:five_prime_UTR
AAGAGTATAAATTATGAAAA+TGG 0.289137 8_4:+49566084 Msa1330420:exon
TGGTTGGCAACAAAAGAAAA+AGG 0.290146 8_4:+49562679 Msa1330420:five_prime_UTR
TCAATTGAAGGTGCTACTTC+TGG 0.308401 8_4:+49563036 Msa1330420:intron
AGGTATTTGGCAGGCATTGC+AGG 0.316972 8_4:+49562726 Msa1330420:five_prime_UTR
CCATTAAATGAAAGAAATTA+AGG 0.337870 8_4:-49566022 None:intergenic
GGAATAATAAATGTTTCTTC+AGG 0.352700 8_4:+49566823 Msa1330420:CDS
TTATGCTGAGGTTATTCTAT+TGG 0.355615 8_4:+49563173 Msa1330420:five_prime_UTR
GATTCTGCATGTGAAGAAAA+TGG 0.356082 8_4:+49567069 Msa1330420:CDS
ATGAGAGCTGTTAGGTTTGA+AGG 0.360069 8_4:-49562813 None:intergenic
GAAGGTGCTACTTCTGGTAT+TGG 0.364873 8_4:+49563042 Msa1330420:intron
TAGTTAGTATATAAGGTAGA+AGG 0.366992 8_4:+49566161 Msa1330420:intron
AGGAATTATTAGAGCACATA+AGG 0.377554 8_4:+49565435 Msa1330420:five_prime_UTR
TGGTGCCAGGGACATGAAAA+AGG 0.383783 8_4:+49563113 Msa1330420:five_prime_UTR
CTTACTTCATGAACAACTAA+TGG 0.394606 8_4:+49567849 Msa1330420:CDS
GCGATTATCCAACAAATAGA+AGG 0.395062 8_4:+49567727 Msa1330420:CDS
TTTCTTCAGTAATTCATAGC+TGG 0.397861 8_4:+49564987 Msa1330420:five_prime_UTR
CGACTAAAACAAGCAACAAT+TGG 0.400873 8_4:+49565871 Msa1330420:five_prime_UTR
GCAAATAAAACAGGCATTCA+AGG 0.411603 8_4:+49564950 Msa1330420:five_prime_UTR
CATTAGTTGTTCATGAAGTA+AGG 0.421762 8_4:-49567848 None:intergenic
CAACAAATAGAAGGGGTGAA+TGG 0.427527 8_4:+49567736 Msa1330420:CDS
TGAGAGTTGTGGTTGGTGCC+AGG 0.429651 8_4:+49563100 Msa1330420:five_prime_UTR
TTCTTCAGTAATTCATAGCT+GGG 0.432368 8_4:+49564988 Msa1330420:five_prime_UTR
CAGCATAAGGACTCTCCTCT+TGG 0.434439 8_4:-49563158 None:intergenic
ATTCCTGTCTTCACAATGCC+TGG 0.434455 8_4:-49565418 None:intergenic
AACAAATAGAAGGGGTGAAT+GGG 0.434978 8_4:+49567737 Msa1330420:CDS
CATCGATGAAGGGAACAATA+AGG 0.437595 8_4:+49562706 Msa1330420:five_prime_UTR
TTCCTTCACATGCAGAATCA+TGG 0.450116 8_4:-49565203 None:intergenic
AGCACATAAGGGCTTAATAA+CGG 0.451942 8_4:+49565447 Msa1330420:five_prime_UTR
ATAGATACTGCAAATAAAAC+AGG 0.452810 8_4:+49564941 Msa1330420:five_prime_UTR
ACATTTGCTACAAATTACTT+AGG 0.455021 8_4:+49563640 Msa1330420:five_prime_UTR
TTAAAACTACATTATAATCA+AGG 0.455328 8_4:+49565974 Msa1330420:five_prime_UTR
GCACATAAGGGCTTAATAAC+GGG 0.456442 8_4:+49565448 Msa1330420:five_prime_UTR
TTTCTTCACATGCAGAATCA+TGG 0.461279 8_4:-49567065 None:intergenic
CACTTACATGAGAATATTAA+GGG 0.464360 8_4:-49563262 None:intergenic
AATAGAATAACCTCAGCATA+AGG 0.472498 8_4:-49563171 None:intergenic
TACCAGTGATGAGAGCTGTT+AGG 0.489625 8_4:-49562821 None:intergenic
TGCTTTAAAGACATGCTCAC+TGG 0.492898 8_4:+49565028 Msa1330420:five_prime_UTR
TGTAGTTACAAACTTACAAT+GGG 0.497135 8_4:+49567014 Msa1330420:intron
TTCTTCAGGAATTCATAGCT+TGG 0.499853 8_4:+49566837 Msa1330420:CDS
GGAAATGGCTAGACAACTAA+AGG 0.519535 8_4:+49565222 Msa1330420:five_prime_UTR
TGAGAGCTGTTAGGTTTGAA+GGG 0.521862 8_4:-49562812 None:intergenic
TAAAACTACATTATAATCAA+GGG 0.529101 8_4:+49565975 Msa1330420:five_prime_UTR
AGATACATGGTCTAGAATAG+AGG 0.530017 8_4:-49565906 None:intergenic
ATGTAGTTACAAACTTACAA+TGG 0.532740 8_4:+49567013 Msa1330420:intron
GATTCTGCATGTGAAGGAAA+TGG 0.534551 8_4:+49565207 Msa1330420:five_prime_UTR
GCAATTAAGACAGACATTCA+AGG 0.540700 8_4:+49566799 Msa1330420:CDS
GGAATTATTAGAGCACATAA+GGG 0.541916 8_4:+49565436 Msa1330420:five_prime_UTR
AACCTAACAGCTCTCATCAC+TGG 0.543509 8_4:+49562819 Msa1330420:five_prime_UTR
ACTATCAATGCAGTGCATCC+AGG 0.545366 8_4:+49565400 Msa1330420:five_prime_UTR
ACATTATAATCAAGGGGAAG+AGG 0.546363 8_4:+49565982 Msa1330420:five_prime_UTR
CATCCAGGCATTGTGAAGAC+AGG 0.549477 8_4:+49565415 Msa1330420:five_prime_UTR
CGATTATCCAACAAATAGAA+GGG 0.555411 8_4:+49567728 Msa1330420:CDS
GAGAGTTGTGGTTGGTGCCA+GGG 0.563988 8_4:+49563101 Msa1330420:five_prime_UTR
GCAGGCATTGCAGGGCCTAG+TGG 0.577354 8_4:+49562735 Msa1330420:five_prime_UTR
GATACATGGTCTAGAATAGA+GGG 0.578220 8_4:-49565905 None:intergenic
GGTATTTGGCAGGCATTGCA+GGG 0.578276 8_4:+49562727 Msa1330420:five_prime_UTR
GAGCTGTTAGGTTTGAAGGG+AGG 0.584163 8_4:-49562809 None:intergenic
AGCCATGATTCTGCATGTGA+AGG 0.585391 8_4:+49565201 Msa1330420:five_prime_UTR
GGAACAATAAGGTATTTGGC+AGG 0.598423 8_4:+49562717 Msa1330420:five_prime_UTR
GAATTTGAGCCAAAACCACT+AGG 0.598994 8_4:-49562750 None:intergenic
TATACACACACATGCATGCA+CGG 0.603638 8_4:-49565934 None:intergenic
AAAAGGGAATCATCGATGAA+GGG 0.604378 8_4:+49562696 Msa1330420:five_prime_UTR
AGTTGGAGGACACGAATGGT+TGG 0.604406 8_4:+49562663 None:intergenic
TGTTTCAAAGACATGCTCGA+TGG 0.611040 8_4:+49566877 Msa1330420:CDS
GCTGCTCAAAACGATATCAC+AGG 0.618153 8_4:+49565598 Msa1330420:five_prime_UTR
AGGAGTGTACTCTCATAACC+TGG 0.628213 8_4:+49563591 Msa1330420:five_prime_UTR
AAAACTACATTATAATCAAG+GGG 0.628743 8_4:+49565976 Msa1330420:five_prime_UTR
ATGCACGGTGTCTAGATACA+TGG 0.629660 8_4:-49565919 None:intergenic
AGAGGAGTGAGAGTTGTGGT+TGG 0.631623 8_4:+49563093 Msa1330420:five_prime_UTR
CAAACTTACAATGGGACACG+CGG 0.655728 8_4:+49567022 Msa1330420:CDS
AGAGGAGAGTCCTTATGCTG+AGG 0.678257 8_4:+49563161 Msa1330420:five_prime_UTR
GATTATCCAACAAATAGAAG+GGG 0.684886 8_4:+49567729 Msa1330420:CDS
ACTTACATGAGAATATTAAG+GGG 0.701725 8_4:-49563261 None:intergenic
ATTAAGACAGACATTCAAGG+AGG 0.735907 8_4:+49566802 Msa1330420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATATTTTTTTAATATT+GGG + chr8_4:49567206-49567225 Msa1330420:intron 0.0%
!! AATATAAAAAACTAAAGTAA+TGG + chr8_4:49563944-49563963 Msa1330420:intron 10.0%
!! ATTAATCATGTTAAAAAATA+TGG + chr8_4:49564538-49564557 Msa1330420:intron 10.0%
!!! TGCATTAATTAATTAAATTT+TGG + chr8_4:49565109-49565128 Msa1330420:intron 10.0%
!!! ACTAATATTTTTTTGAATAT+TGG + chr8_4:49565346-49565365 Msa1330420:intron 10.0%
!!! CTAATATTTTTTTGAATATT+GGG + chr8_4:49565347-49565366 Msa1330420:intron 10.0%
!!! TGAAATTTTTTGAAAATATA+TGG - chr8_4:49565548-49565567 None:intergenic 10.0%
!!! AAAATATAAAGTTAATTTGA+GGG - chr8_4:49567128-49567147 None:intergenic 10.0%
!!! AAAAATATAAAGTTAATTTG+AGG - chr8_4:49567129-49567148 None:intergenic 10.0%
!!! AATGAATATATGTTTTGTTT+TGG + chr8_4:49563008-49563027 Msa1330420:intron 15.0%
!! TTAATGTATTATTCATACAT+AGG - chr8_4:49563866-49563885 None:intergenic 15.0%
!!! CAAAAAGTTTTTTTTTGTTA+TGG - chr8_4:49564155-49564174 None:intergenic 15.0%
!!! TTTTTGTAATAAGAAACTTA+AGG + chr8_4:49564169-49564188 Msa1330420:intron 15.0%
!! ATTTAAACTCCATAATAAAA+AGG + chr8_4:49564377-49564396 Msa1330420:intron 15.0%
!!! ATTTTTTAACATGATTAATC+AGG - chr8_4:49564537-49564556 None:intergenic 15.0%
!! AACAATACGAAATTATTTAA+AGG - chr8_4:49565492-49565511 None:intergenic 15.0%
!!! TTGTTTCAAACAATTTTATA+TGG + chr8_4:49565507-49565526 Msa1330420:intron 15.0%
!! TTAAAACTACATTATAATCA+AGG + chr8_4:49565974-49565993 Msa1330420:five_prime_UTR 15.0%
!! TAAAACTACATTATAATCAA+GGG + chr8_4:49565975-49565994 Msa1330420:five_prime_UTR 15.0%
!!! AAGAGTATAAATTATGAAAA+TGG + chr8_4:49566084-49566103 Msa1330420:exon 15.0%
!!! CTACACTTTTTTTTTTTTAA+GGG - chr8_4:49566446-49566465 None:intergenic 15.0%
!!! ACTACACTTTTTTTTTTTTA+AGG - chr8_4:49566447-49566466 None:intergenic 15.0%
!!! AAAAAAGTGTAGTTAAAATT+AGG + chr8_4:49566454-49566473 Msa1330420:intron 15.0%
!! TAATAAAATAAATTATGTGG+TGG + chr8_4:49566604-49566623 Msa1330420:intron 15.0%
!!! TACATTTTTGTTATGTAAAA+CGG - chr8_4:49566998-49567017 None:intergenic 15.0%
!!! AAATATAAAGTTAATTTGAG+GGG - chr8_4:49567127-49567146 None:intergenic 15.0%
!!! TGCATTAAATAATTTTACAA+AGG + chr8_4:49567353-49567372 Msa1330420:intron 15.0%
!!! GCATTAAATAATTTTACAAA+GGG + chr8_4:49567354-49567373 Msa1330420:intron 15.0%
!! AAAACATTTAAAGATATAGA+CGG - chr8_4:49567524-49567543 None:intergenic 15.0%
!! TAATCTGGTATATAAAAAAT+CGG - chr8_4:49567558-49567577 None:intergenic 15.0%
!! ATACAATATAATCACAATTG+AGG - chr8_4:49563431-49563450 None:intergenic 20.0%
!! ATTGTGATTATATTGTATTG+TGG + chr8_4:49563433-49563452 Msa1330420:intron 20.0%
!! AATGAAGCATAGTAAAAATT+AGG + chr8_4:49563819-49563838 Msa1330420:intron 20.0%
!!! TGTGACTTTTTTTTTTTATG+TGG - chr8_4:49564285-49564304 None:intergenic 20.0%
!!! TTTTTGGTCCATTTAAATTT+TGG - chr8_4:49564426-49564445 None:intergenic 20.0%
!! TTTAAATGGACCAAAAAAAT+TGG + chr8_4:49564429-49564448 Msa1330420:intron 20.0%
!!! AACATTTTTGAAAGCTAATT+TGG + chr8_4:49564724-49564743 Msa1330420:intron 20.0%
!!! AATTTGTTTGAATTAGAAGA+AGG + chr8_4:49564786-49564805 Msa1330420:intron 20.0%
!! TAACAAAAATGTAGTTACAA+TGG + chr8_4:49565151-49565170 Msa1330420:intron 20.0%
!! AACAAAAATGTAGTTACAAT+GGG + chr8_4:49565152-49565171 Msa1330420:intron 20.0%
!! TGTCATATCATATATGATTA+AGG + chr8_4:49565292-49565311 Msa1330420:intron 20.0%
!! GTCATATCATATATGATTAA+GGG + chr8_4:49565293-49565312 Msa1330420:intron 20.0%
!! GAATATTGGGAAATAATTAT+AGG + chr8_4:49565360-49565379 Msa1330420:intron 20.0%
!! TTGAAAATATATGGCTTAAT+TGG - chr8_4:49565539-49565558 None:intergenic 20.0%
!! AAAACTACATTATAATCAAG+GGG + chr8_4:49565976-49565995 Msa1330420:five_prime_UTR 20.0%
!! CCATTAAATGAAAGAAATTA+AGG - chr8_4:49566025-49566044 None:intergenic 20.0%
!! CCTTAATTTCTTTCATTTAA+TGG + chr8_4:49566022-49566041 Msa1330420:five_prime_UTR 20.0%
!! ACTCATTTAGTTAGTATATA+AGG + chr8_4:49566154-49566173 Msa1330420:intron 20.0%
!! ATCATGTTTCTTAATTAACA+CGG + chr8_4:49566269-49566288 Msa1330420:intron 20.0%
!!! TTTCTTAATTTTGCAGAAAA+AGG - chr8_4:49566928-49566947 None:intergenic 20.0%
!! TAATATTGGGAAATAATCAT+AGG + chr8_4:49567219-49567238 Msa1330420:intron 20.0%
!!! ATTAATTTGTACTTACAGAA+GGG - chr8_4:49567331-49567350 None:intergenic 20.0%
!!! GTCTATATCTTTAAATGTTT+TGG + chr8_4:49567523-49567542 Msa1330420:intron 20.0%
! TGCAAGTATATACATAATAC+TGG - chr8_4:49562956-49562975 None:intergenic 25.0%
!!! GTTTTGGAATTTTCAATTGA+AGG + chr8_4:49563024-49563043 Msa1330420:intron 25.0%
!! CAAATCTAAAGCTAAAAACT+CGG - chr8_4:49563241-49563260 None:intergenic 25.0%
! ACTTACATGAGAATATTAAG+GGG - chr8_4:49563264-49563283 None:intergenic 25.0%
! CACTTACATGAGAATATTAA+GGG - chr8_4:49563265-49563284 None:intergenic 25.0%
! ACACTTACATGAGAATATTA+AGG - chr8_4:49563266-49563285 None:intergenic 25.0%
! AAGCATAAGAAATGACAATA+AGG - chr8_4:49563308-49563327 None:intergenic 25.0%
!! TGTCAATTCAATTTTCTCTT+CGG - chr8_4:49563623-49563642 None:intergenic 25.0%
!! ACATTTGCTACAAATTACTT+AGG + chr8_4:49563640-49563659 Msa1330420:five_prime_UTR 25.0%
!! TTTTCATTCTTACATATGAG+AGG + chr8_4:49563669-49563688 Msa1330420:intron 25.0%
!! TTTTTACTATGCTTCATTCA+TGG - chr8_4:49563817-49563836 None:intergenic 25.0%
! TTTATGTATATCGGACTAAA+CGG - chr8_4:49564020-49564039 None:intergenic 25.0%
! AAACTTTAGCAGTCTAATTA+TGG + chr8_4:49564320-49564339 Msa1330420:intron 25.0%
! CCATAATAAAAAGGTCTAAA+CGG + chr8_4:49564386-49564405 Msa1330420:intron 25.0%
! TAGCTTTCAAAAATGTTTCA+TGG - chr8_4:49564721-49564740 None:intergenic 25.0%
! TTTGTTAACAAAAATGCTAC+TGG + chr8_4:49564910-49564929 Msa1330420:five_prime_UTR 25.0%
! ATAGATACTGCAAATAAAAC+AGG + chr8_4:49564941-49564960 Msa1330420:five_prime_UTR 25.0%
!! TTCTTAATTTTGCAGAGAAA+AGG - chr8_4:49565079-49565098 None:intergenic 25.0%
! AAATATTAAGGCAATTTGAG+AGG - chr8_4:49565265-49565284 None:intergenic 25.0%
! TGACAAGAGCAAAAATATTA+AGG - chr8_4:49565277-49565296 None:intergenic 25.0%
! CTTTGATGCAATAAAAAACA+AGG - chr8_4:49565579-49565598 None:intergenic 25.0%
! TAGTTAGTATATAAGGTAGA+AGG + chr8_4:49566161-49566180 Msa1330420:intron 25.0%
!!! ACTTTTTTCATTATCATCTG+AGG + chr8_4:49566293-49566312 Msa1330420:intron 25.0%
! TGTTAAGAGCTACAAATTAA+AGG - chr8_4:49566371-49566390 None:intergenic 25.0%
!!! CCTTTTTTTTATTCATACAC+AGG - chr8_4:49566501-49566520 None:intergenic 25.0%
! CCTGTGTATGAATAAAAAAA+AGG + chr8_4:49566498-49566517 Msa1330420:intron 25.0%
! ATTCTAACATATCCACATAT+AGG + chr8_4:49566646-49566665 Msa1330420:intron 25.0%
! AAAATAATGTCCTGCAATTT+AGG - chr8_4:49566738-49566757 None:intergenic 25.0%
!! TATCTATGATTTTCTCTAGT+AGG - chr8_4:49566777-49566796 None:intergenic 25.0%
! GGAATAATAAATGTTTCTTC+AGG + chr8_4:49566823-49566842 Msa1330420:CDS 25.0%
! ATGTAGTTACAAACTTACAA+TGG + chr8_4:49567013-49567032 Msa1330420:intron 25.0%
! TGTAGTTACAAACTTACAAT+GGG + chr8_4:49567014-49567033 Msa1330420:intron 25.0%
!!! GATTAATTTGTACTTACAGA+AGG - chr8_4:49567332-49567351 None:intergenic 25.0%
!!! ATCCATGTTTCACTTTTATA+AGG + chr8_4:49567384-49567403 Msa1330420:intron 25.0%
! AACCTTATAAAAGTGAAACA+TGG - chr8_4:49567389-49567408 None:intergenic 25.0%
! ATTTAAGAGACAATCTAATC+TGG - chr8_4:49567573-49567592 None:intergenic 25.0%
! ATACGTTAGTTACTTCATAT+TGG - chr8_4:49567675-49567694 None:intergenic 25.0%
AGTGAAAGAAAAAATCCAAG+AGG + chr8_4:49563143-49563162 Msa1330420:five_prime_UTR 30.0%
AATAGAATAACCTCAGCATA+AGG - chr8_4:49563174-49563193 None:intergenic 30.0%
TTATGCTGAGGTTATTCTAT+TGG + chr8_4:49563173-49563192 Msa1330420:five_prime_UTR 30.0%
TTGATTCATCAGTTGAGAAA+AGG + chr8_4:49563328-49563347 Msa1330420:intron 30.0%
TGATTCATCAGTTGAGAAAA+GGG + chr8_4:49563329-49563348 Msa1330420:intron 30.0%
! TCTGACTACAATTTAAAACC+CGG - chr8_4:49563359-49563378 None:intergenic 30.0%
TTAGCACAACATGAATTAAC+AGG - chr8_4:49563529-49563548 None:intergenic 30.0%
GTTAAGAGCTACAAACTAAA+GGG - chr8_4:49563747-49563766 None:intergenic 30.0%
TGTTAAGAGCTACAAACTAA+AGG - chr8_4:49563748-49563767 None:intergenic 30.0%
AATGTACCTACCTAATTAGA+AGG - chr8_4:49563917-49563936 None:intergenic 30.0%
AAAACTAAAGTAATGGTGCA+TGG + chr8_4:49563951-49563970 Msa1330420:intron 30.0%
TTATGTATATCGGACTAAAC+GGG - chr8_4:49564019-49564038 None:intergenic 30.0%
GATCCGTTCGTAAAATATAA+CGG + chr8_4:49564064-49564083 Msa1330420:intron 30.0%
ATCCGTTCGTAAAATATAAC+GGG + chr8_4:49564065-49564084 Msa1330420:intron 30.0%
! AACCCGTTATATTTTACGAA+CGG - chr8_4:49564070-49564089 None:intergenic 30.0%
!! TTCGTAAAATATAACGGGTT+GGG + chr8_4:49564070-49564089 Msa1330420:intron 30.0%
! CCGTTTAGACCTTTTTATTA+TGG - chr8_4:49564389-49564408 None:intergenic 30.0%
TTCTTGTGTTCTTAAATTGC+AGG + chr8_4:49564881-49564900 Msa1330420:intron 30.0%
TTTCTTCAGTAATTCATAGC+TGG + chr8_4:49564987-49565006 Msa1330420:five_prime_UTR 30.0%
TTCTTCAGTAATTCATAGCT+GGG + chr8_4:49564988-49565007 Msa1330420:five_prime_UTR 30.0%
TTGGGAAATAATTATAGGCA+AGG + chr8_4:49565365-49565384 Msa1330420:intron 30.0%
AGGAATTATTAGAGCACATA+AGG + chr8_4:49565435-49565454 Msa1330420:five_prime_UTR 30.0%
GGAATTATTAGAGCACATAA+GGG + chr8_4:49565436-49565455 Msa1330420:five_prime_UTR 30.0%
ATTAAAATCCCTATTCACCA+TGG - chr8_4:49565671-49565690 None:intergenic 30.0%
TATATATGTTTGCACTTTGC+AGG + chr8_4:49565690-49565709 Msa1330420:intron 30.0%
ATATATGTTTGCACTTTGCA+GGG + chr8_4:49565691-49565710 Msa1330420:intron 30.0%
! TGTATTGTTCCATAGCTTTT+TGG - chr8_4:49565833-49565852 None:intergenic 30.0%
ATTAAGAAACATGATACCAG+AGG - chr8_4:49566264-49566283 None:intergenic 30.0%
TTATTTCCTTCCTAAATTGC+AGG + chr8_4:49566725-49566744 Msa1330420:intron 30.0%
! TATGATTTTCTCTAGTAGGT+TGG - chr8_4:49566773-49566792 None:intergenic 30.0%
! ATTTTTGTTCTTGCCATCTA+TGG + chr8_4:49567143-49567162 Msa1330420:intron 30.0%
!!! AGTACAAAGTTTTGTTTTCG+TGG - chr8_4:49567187-49567206 None:intergenic 30.0%
AAAAGTGAAACATGGATATG+AGG - chr8_4:49567381-49567400 None:intergenic 30.0%
TGAAAAAGAAGTAATCTGCA+TGG - chr8_4:49567444-49567463 None:intergenic 30.0%
AAAGATATAGACGGTTTATG+TGG - chr8_4:49567515-49567534 None:intergenic 30.0%
CGATTATCCAACAAATAGAA+GGG + chr8_4:49567728-49567747 Msa1330420:CDS 30.0%
GATTATCCAACAAATAGAAG+GGG + chr8_4:49567729-49567748 Msa1330420:CDS 30.0%
AATCAGAAGCTAAAAAGCTT+TGG + chr8_4:49567812-49567831 Msa1330420:CDS 30.0%
CATTAGTTGTTCATGAAGTA+AGG - chr8_4:49567851-49567870 None:intergenic 30.0%
CTTACTTCATGAACAACTAA+TGG + chr8_4:49567849-49567868 Msa1330420:CDS 30.0%
TGGTTGGCAACAAAAGAAAA+AGG + chr8_4:49562679-49562698 Msa1330420:five_prime_UTR 35.0%
GGTTGGCAACAAAAGAAAAA+GGG + chr8_4:49562680-49562699 Msa1330420:five_prime_UTR 35.0%
AAAAAGGGAATCATCGATGA+AGG + chr8_4:49562695-49562714 Msa1330420:five_prime_UTR 35.0%
AAAAGGGAATCATCGATGAA+GGG + chr8_4:49562696-49562715 Msa1330420:five_prime_UTR 35.0%
! GAAGGGAACAATAAGGTATT+TGG + chr8_4:49562713-49562732 Msa1330420:five_prime_UTR 35.0%
TAGAGAATCGTGATCAAATG+TGG + chr8_4:49563396-49563415 Msa1330420:intron 35.0%
!! TTGTTTTGCAGAAACAATGC+AGG + chr8_4:49563571-49563590 Msa1330420:intron 35.0%
TATTCATACATAGGTCACCT+AGG - chr8_4:49563857-49563876 None:intergenic 35.0%
GAGACAGACAAAATCATTCA+AGG - chr8_4:49563895-49563914 None:intergenic 35.0%
TTGTCTGTCTCCTTCTAATT+AGG + chr8_4:49563904-49563923 Msa1330420:intron 35.0%
TATGTATATCGGACTAAACG+GGG - chr8_4:49564018-49564037 None:intergenic 35.0%
ACGTGCGAGTTTATGTATAT+CGG - chr8_4:49564029-49564048 None:intergenic 35.0%
!! GTTCGTAAAATATAACGGGT+TGG + chr8_4:49564069-49564088 Msa1330420:intron 35.0%
!! TCGTAAAATATAACGGGTTG+GGG + chr8_4:49564071-49564090 Msa1330420:intron 35.0%
!!! ATACTAGCTTGTTTTACCCA+CGG - chr8_4:49564127-49564146 None:intergenic 35.0%
CTTTAGCAGTCTAATTATGG+TGG + chr8_4:49564323-49564342 Msa1330420:intron 35.0%
!! CATTTAAATTTTGGTCCGTG+TGG - chr8_4:49564417-49564436 None:intergenic 35.0%
CACACGGACCAAAATTTAAA+TGG + chr8_4:49564415-49564434 Msa1330420:intron 35.0%
!!! GGGCTTTGAACCAATTTTTT+TGG - chr8_4:49564442-49564461 None:intergenic 35.0%
GTGATTAATCAAGTATCCCA+GGG + chr8_4:49564677-49564696 Msa1330420:intron 35.0%
TGATTAATCAAGTATCCCAG+GGG + chr8_4:49564678-49564697 Msa1330420:intron 35.0%
!!! TTTCATGGACAGCCATTTTT+TGG - chr8_4:49564706-49564725 None:intergenic 35.0%
AGAAAAGAATACCCACAGAT+AGG + chr8_4:49564812-49564831 Msa1330420:intron 35.0%
GCAAATAAAACAGGCATTCA+AGG + chr8_4:49564950-49564969 Msa1330420:five_prime_UTR 35.0%
TGCAGAGAAAAGGAAACAAA+TGG - chr8_4:49565069-49565088 None:intergenic 35.0%
AGCACATAAGGGCTTAATAA+CGG + chr8_4:49565447-49565466 Msa1330420:five_prime_UTR 35.0%
!!! TACCTTTGTTTTCCAAACCA+TGG + chr8_4:49565651-49565670 Msa1330420:intron 35.0%
! TTTTCCAAACCATGGTGAAT+AGG + chr8_4:49565659-49565678 Msa1330420:intron 35.0%
TTTCCAAACCATGGTGAATA+GGG + chr8_4:49565660-49565679 Msa1330420:intron 35.0%
CTCTAAGCCAAAAAATCGAA+GGG + chr8_4:49565737-49565756 Msa1330420:five_prime_UTR 35.0%
TCTAAGCCAAAAAATCGAAG+GGG + chr8_4:49565738-49565757 Msa1330420:five_prime_UTR 35.0%
AATCAGAAGCCAAAAAGCTA+TGG + chr8_4:49565821-49565840 Msa1330420:five_prime_UTR 35.0%
CGACTAAAACAAGCAACAAT+TGG + chr8_4:49565871-49565890 Msa1330420:five_prime_UTR 35.0%
! GATACATGGTCTAGAATAGA+GGG - chr8_4:49565908-49565927 None:intergenic 35.0%
! AGATACATGGTCTAGAATAG+AGG - chr8_4:49565909-49565928 None:intergenic 35.0%
ACATTATAATCAAGGGGAAG+AGG + chr8_4:49565982-49566001 Msa1330420:five_prime_UTR 35.0%
TGCTGATGTAGTCAAAGATT+TGG - chr8_4:49566332-49566351 None:intergenic 35.0%
TTGTTTGTCTCCTTCTAACT+AGG + chr8_4:49566536-49566555 Msa1330420:intron 35.0%
ATCATACCAACCTAGTTAGA+AGG - chr8_4:49566549-49566568 None:intergenic 35.0%
TAATGTCCTGCAATTTAGGA+AGG - chr8_4:49566734-49566753 None:intergenic 35.0%
GCAATTAAGACAGACATTCA+AGG + chr8_4:49566799-49566818 Msa1330420:CDS 35.0%
ATTAAGACAGACATTCAAGG+AGG + chr8_4:49566802-49566821 Msa1330420:CDS 35.0%
TTCTTCAGGAATTCATAGCT+TGG + chr8_4:49566837-49566856 Msa1330420:CDS 35.0%
TTGCAGAAAAAGGAAGCAAA+TGG - chr8_4:49566918-49566937 None:intergenic 35.0%
TTTCTTCACATGCAGAATCA+TGG - chr8_4:49567068-49567087 None:intergenic 35.0%
GATTCTGCATGTGAAGAAAA+TGG + chr8_4:49567069-49567088 Msa1330420:CDS 35.0%
TTCTTGCCATCTATGGTTAA+GGG + chr8_4:49567150-49567169 Msa1330420:intron 35.0%
TTATCACCCTTAACCATAGA+TGG - chr8_4:49567159-49567178 None:intergenic 35.0%
TTGGGAAATAATCATAGGCA+AGG + chr8_4:49567224-49567243 Msa1330420:intron 35.0%
AACTATTAATGCAGTGCATC+TGG + chr8_4:49567258-49567277 Msa1330420:intron 35.0%
ACTATTAATGCAGTGCATCT+GGG + chr8_4:49567259-49567278 Msa1330420:intron 35.0%
AGTTGCTCAAACAATATCAC+AGG + chr8_4:49567473-49567492 Msa1330420:intron 35.0%
!!! AAAACTGTCCTTTTTTCCTC+TGG - chr8_4:49567643-49567662 None:intergenic 35.0%
GCGATTATCCAACAAATAGA+AGG + chr8_4:49567727-49567746 Msa1330420:CDS 35.0%
AACAAATAGAAGGGGTGAAT+GGG + chr8_4:49567737-49567756 Msa1330420:CDS 35.0%
CATCGATGAAGGGAACAATA+AGG + chr8_4:49562706-49562725 Msa1330420:five_prime_UTR 40.0%
! GGAACAATAAGGTATTTGGC+AGG + chr8_4:49562717-49562736 Msa1330420:five_prime_UTR 40.0%
GAATTTGAGCCAAAACCACT+AGG - chr8_4:49562753-49562772 None:intergenic 40.0%
TGAGAGCTGTTAGGTTTGAA+GGG - chr8_4:49562815-49562834 None:intergenic 40.0%
ATGAGAGCTGTTAGGTTTGA+AGG - chr8_4:49562816-49562835 None:intergenic 40.0%
!! TCAATTGAAGGTGCTACTTC+TGG + chr8_4:49563036-49563055 Msa1330420:intron 40.0%
! GCTAGAGTGTTAGCAAAAAG+AGG + chr8_4:49563075-49563094 Msa1330420:five_prime_UTR 40.0%
AAAAAGAGGAGTGAGAGTTG+TGG + chr8_4:49563089-49563108 Msa1330420:five_prime_UTR 40.0%
AGATTTGCGACTGCAATCTA+GGG - chr8_4:49563489-49563508 None:intergenic 40.0%
! TTTTCTCTTCGGAGAATTCC+AGG - chr8_4:49563612-49563631 None:intergenic 40.0%
GTGTGGAATTCATATTCTGC+TGG - chr8_4:49563725-49563744 None:intergenic 40.0%
CTGTCTCCTTCTAATTAGGT+AGG + chr8_4:49563908-49563927 Msa1330420:intron 40.0%
TATCCACCTCTAACAAAGAG+TGG - chr8_4:49563981-49564000 None:intergenic 40.0%
TTTGTTAGAGGTGGATACTC+TGG + chr8_4:49563984-49564003 Msa1330420:intron 40.0%
! TTTGTACTGTGTTGATCCGT+GGG + chr8_4:49564108-49564127 Msa1330420:intron 40.0%
GGGTAAAACAAGCTAGTATG+AGG + chr8_4:49564128-49564147 Msa1330420:intron 40.0%
!! TAAATTTTGGTCCGTGTGGT+TGG - chr8_4:49564413-49564432 None:intergenic 40.0%
CGTGATTAATCAAGTATCCC+AGG + chr8_4:49564676-49564695 Msa1330420:intron 40.0%
!! TGCTTTAAAGACATGCTCAC+TGG + chr8_4:49565028-49565047 Msa1330420:five_prime_UTR 40.0%
TTCCTTCACATGCAGAATCA+TGG - chr8_4:49565206-49565225 None:intergenic 40.0%
GATTCTGCATGTGAAGGAAA+TGG + chr8_4:49565207-49565226 Msa1330420:five_prime_UTR 40.0%
GGAAATGGCTAGACAACTAA+AGG + chr8_4:49565222-49565241 Msa1330420:five_prime_UTR 40.0%
GCACATAAGGGCTTAATAAC+GGG + chr8_4:49565448-49565467 Msa1330420:five_prime_UTR 40.0%
! CACCATGGTTTGGAAAACAA+AGG - chr8_4:49565656-49565675 None:intergenic 40.0%
AATCCCTATTCACCATGGTT+TGG - chr8_4:49565666-49565685 None:intergenic 40.0%
! GCTCTAAGCCAAAAAATCGA+AGG + chr8_4:49565736-49565755 Msa1330420:five_prime_UTR 40.0%
AAAAAATCGAAGGGGTGAGT+GGG + chr8_4:49565746-49565765 Msa1330420:five_prime_UTR 40.0%
TATACACACACATGCATGCA+CGG - chr8_4:49565937-49565956 None:intergenic 40.0%
TATTCATACACAGGTCACCT+AGG - chr8_4:49566492-49566511 None:intergenic 40.0%
TTGTCTCCTTCTAACTAGGT+TGG + chr8_4:49566540-49566559 Msa1330420:intron 40.0%
! CCTTTTCTGTTGCCTATATG+TGG - chr8_4:49566661-49566680 None:intergenic 40.0%
CCACATATAGGCAACAGAAA+AGG + chr8_4:49566658-49566677 Msa1330420:intron 40.0%
TGTTTCAAAGACATGCTCGA+TGG + chr8_4:49566877-49566896 Msa1330420:CDS 40.0%
GTTCTTGCCATCTATGGTTA+AGG + chr8_4:49567149-49567168 Msa1330420:intron 40.0%
! TACGCAGTGTTTCTAACAGA+AGG - chr8_4:49567620-49567639 None:intergenic 40.0%
AGTAACTAACGTATCTCTGC+AGG + chr8_4:49567681-49567700 Msa1330420:intron 40.0%
GTAACTAACGTATCTCTGCA+GGG + chr8_4:49567682-49567701 Msa1330420:intron 40.0%
CATTCACCCCTTCTATTTGT+TGG - chr8_4:49567738-49567757 None:intergenic 40.0%
CAACAAATAGAAGGGGTGAA+TGG + chr8_4:49567736-49567755 Msa1330420:CDS 40.0%
AACCTAACAGCTCTCATCAC+TGG + chr8_4:49562819-49562838 Msa1330420:five_prime_UTR 45.0%
TACCAGTGATGAGAGCTGTT+AGG - chr8_4:49562824-49562843 None:intergenic 45.0%
!! GAAGGTGCTACTTCTGGTAT+TGG + chr8_4:49563042-49563061 Msa1330420:intron 45.0%
!! CATAGCCTTTTTCATGTCCC+TGG - chr8_4:49563121-49563140 None:intergenic 45.0%
CAGTTGAGAAAAGGGAGATC+CGG + chr8_4:49563337-49563356 Msa1330420:intron 45.0%
AGTTGAGAAAAGGGAGATCC+GGG + chr8_4:49563338-49563357 Msa1330420:intron 45.0%
GAGATTTGCGACTGCAATCT+AGG - chr8_4:49563490-49563509 None:intergenic 45.0%
! AGGAGTGTACTCTCATAACC+TGG + chr8_4:49563591-49563610 Msa1330420:five_prime_UTR 45.0%
GAGCTACAAACTAAAGGGTG+TGG - chr8_4:49563742-49563761 None:intergenic 45.0%
TTAGGCTCAAACAGAGTCCT+AGG + chr8_4:49563837-49563856 Msa1330420:intron 45.0%
TTAGAGGTGGATACTCTGGT+TGG + chr8_4:49563988-49564007 Msa1330420:intron 45.0%
! GTTTGTACTGTGTTGATCCG+TGG + chr8_4:49564107-49564126 Msa1330420:intron 45.0%
! AAATTGGTTCAAAGCCCCTG+TGG + chr8_4:49564445-49564464 Msa1330420:intron 45.0%
TGAACAAGTCCGTTAACACG+CGG - chr8_4:49564472-49564491 None:intergenic 45.0%
!! ATCCCAGGGGTACCAAAAAA+TGG + chr8_4:49564691-49564710 Msa1330420:intron 45.0%
!!! AGCCATTTTTTGGTACCCCT+GGG - chr8_4:49564696-49564715 None:intergenic 45.0%
ATAGGCAACAGAGAGGGATT+TGG + chr8_4:49564830-49564849 Msa1330420:intron 45.0%
AGCCATGATTCTGCATGTGA+AGG + chr8_4:49565201-49565220 Msa1330420:five_prime_UTR 45.0%
ACTATCAATGCAGTGCATCC+AGG + chr8_4:49565400-49565419 Msa1330420:five_prime_UTR 45.0%
ATTCCTGTCTTCACAATGCC+TGG - chr8_4:49565421-49565440 None:intergenic 45.0%
GCTGCTCAAAACGATATCAC+AGG + chr8_4:49565598-49565617 Msa1330420:five_prime_UTR 45.0%
!!! CACTCACCCCTTCGATTTTT+TGG - chr8_4:49565747-49565766 None:intergenic 45.0%
CAAAAAATCGAAGGGGTGAG+TGG + chr8_4:49565745-49565764 Msa1330420:five_prime_UTR 45.0%
ATGCACGGTGTCTAGATACA+TGG - chr8_4:49565922-49565941 None:intergenic 45.0%
TTAGGCTCAAACAGAGTCCT+AGG + chr8_4:49563837-49563856 Msa1330420:intron 45.0%
CAAACTTACAATGGGACACG+CGG + chr8_4:49567022-49567041 Msa1330420:CDS 45.0%
CAACTTTACCAGTTGCGCTA+AGG + chr8_4:49567302-49567321 Msa1330420:intron 45.0%
TTAGAAACACTGCGTACCAG+AGG + chr8_4:49567624-49567643 Msa1330420:intron 45.0%
ACTGCGTACCAGAGGAAAAA+AGG + chr8_4:49567632-49567651 Msa1330420:intron 45.0%
!! TTATAATAAAATAAATTATG+TGG + chr8_4:49566601-49566620 Msa1330420:intron 5.0%
!!! TTAGAATATAATATTTTTAA+TGG - chr8_4:49566633-49566652 None:intergenic 5.0%
!!! CTTAAATATTTTTTTAATAT+TGG + chr8_4:49567205-49567224 Msa1330420:intron 5.0%
! AGGTATTTGGCAGGCATTGC+AGG + chr8_4:49562726-49562745 Msa1330420:five_prime_UTR 50.0%
! GGTATTTGGCAGGCATTGCA+GGG + chr8_4:49562727-49562746 Msa1330420:five_prime_UTR 50.0%
! ATTGCAGGGCCTAGTGGTTT+TGG + chr8_4:49562741-49562760 Msa1330420:five_prime_UTR 50.0%
GAGCTGTTAGGTTTGAAGGG+AGG - chr8_4:49562812-49562831 None:intergenic 50.0%
AGAGGAGTGAGAGTTGTGGT+TGG + chr8_4:49563093-49563112 Msa1330420:five_prime_UTR 50.0%
! TGGTGCCAGGGACATGAAAA+AGG + chr8_4:49563113-49563132 Msa1330420:five_prime_UTR 50.0%
CAGCATAAGGACTCTCCTCT+TGG - chr8_4:49563161-49563180 None:intergenic 50.0%
AGAGGAGAGTCCTTATGCTG+AGG + chr8_4:49563161-49563180 Msa1330420:five_prime_UTR 50.0%
GGACAGCCACTCTTTGTTAG+AGG + chr8_4:49563972-49563991 Msa1330420:intron 50.0%
CAGCCACTCTTTGTTAGAGG+TGG + chr8_4:49563975-49563994 Msa1330420:intron 50.0%
TATATCGGACTAAACGGGGC+GGG - chr8_4:49564014-49564033 None:intergenic 50.0%
GTATATCGGACTAAACGGGG+CGG - chr8_4:49564015-49564034 None:intergenic 50.0%
GTCTAAACGGTCCAACCACA+CGG + chr8_4:49564399-49564418 Msa1330420:intron 50.0%
!!! CAGCCATTTTTTGGTACCCC+TGG - chr8_4:49564697-49564716 None:intergenic 50.0%
CCTCTCTGTTGCCTATCTGT+GGG - chr8_4:49564826-49564845 None:intergenic 50.0%
CCACAGATAGGCAACAGAGA+GGG + chr8_4:49564824-49564843 Msa1330420:intron 50.0%
! CATCCAGGCATTGTGAAGAC+AGG + chr8_4:49565415-49565434 Msa1330420:five_prime_UTR 50.0%
GATACCAGAGGAGATGAGAG+AGG - chr8_4:49566252-49566271 None:intergenic 50.0%
! TGAGAGTTGTGGTTGGTGCC+AGG + chr8_4:49563100-49563119 Msa1330420:five_prime_UTR 55.0%
!! GAGAGTTGTGGTTGGTGCCA+GGG + chr8_4:49563101-49563120 Msa1330420:five_prime_UTR 55.0%
CCCACAGATAGGCAACAGAG+AGG + chr8_4:49564823-49564842 Msa1330420:intron 55.0%
CCCTCTCTGTTGCCTATCTG+TGG - chr8_4:49564827-49564846 None:intergenic 55.0%
CCAGAGGAGATGAGAGAGGA+AGG - chr8_4:49566248-49566267 None:intergenic 55.0%
CCTTCCTCTCTCATCTCCTC+TGG + chr8_4:49566245-49566264 Msa1330420:intron 55.0%
! AAGGGTAGCCTTAGCGCAAC+TGG - chr8_4:49567313-49567332 None:intergenic 55.0%
CGTTAACACGCGGTCCACAG+GGG - chr8_4:49564462-49564481 None:intergenic 60.0%
CCGTTAACACGCGGTCCACA+GGG - chr8_4:49564463-49564482 None:intergenic 60.0%
CCCTGTGGACCGCGTGTTAA+CGG + chr8_4:49564460-49564479 Msa1330420:intron 60.0%
TCCGTTAACACGCGGTCCAC+AGG - chr8_4:49564464-49564483 None:intergenic 60.0%
! GCAGGCATTGCAGGGCCTAG+TGG + chr8_4:49562735-49562754 Msa1330420:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49562675 49567885 49562675 ID=Msa1330420;Name=Msa1330420
chr8_4 mRNA 49562675 49567885 49562675 ID=Msa1330420-mRNA-1;Parent=Msa1330420;Name=Msa1330420-mRNA-1;_AED=0.12;_eAED=0.15;_QI=1231|0.63|0.66|1|0.72|0.66|12|0|172
chr8_4 exon 49562675 49562840 49562675 ID=Msa1330420-mRNA-1:exon:14333;Parent=Msa1330420-mRNA-1
chr8_4 exon 49563046 49563277 49563046 ID=Msa1330420-mRNA-1:exon:14334;Parent=Msa1330420-mRNA-1
chr8_4 exon 49563582 49563661 49563582 ID=Msa1330420-mRNA-1:exon:14335;Parent=Msa1330420-mRNA-1
chr8_4 exon 49564903 49565056 49564903 ID=Msa1330420-mRNA-1:exon:14336;Parent=Msa1330420-mRNA-1
chr8_4 exon 49565165 49565243 49565165 ID=Msa1330420-mRNA-1:exon:14337;Parent=Msa1330420-mRNA-1
chr8_4 exon 49565382 49565469 49565382 ID=Msa1330420-mRNA-1:exon:14338;Parent=Msa1330420-mRNA-1
chr8_4 exon 49565573 49565619 49565573 ID=Msa1330420-mRNA-1:exon:14339;Parent=Msa1330420-mRNA-1
chr8_4 exon 49565712 49566105 49565712 ID=Msa1330420-mRNA-1:exon:14340;Parent=Msa1330420-mRNA-1
chr8_4 exon 49566176 49566182 49566176 ID=Msa1330420-mRNA-1:exon:14341;Parent=Msa1330420-mRNA-1
chr8_4 exon 49566782 49567014 49566782 ID=Msa1330420-mRNA-1:exon:14342;Parent=Msa1330420-mRNA-1
chr8_4 exon 49567019 49567105 49567019 ID=Msa1330420-mRNA-1:exon:14343;Parent=Msa1330420-mRNA-1
chr8_4 exon 49567703 49567885 49567703 ID=Msa1330420-mRNA-1:exon:14344;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49562675 49562840 49562675 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49563046 49563277 49563046 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49563582 49563661 49563582 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49564903 49565056 49564903 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49565165 49565243 49565165 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49565382 49565469 49565382 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49565573 49565619 49565573 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 five_prime_UTR 49565712 49566096 49565712 ID=Msa1330420-mRNA-1:five_prime_utr;Parent=Msa1330420-mRNA-1
chr8_4 CDS 49566097 49566105 49566097 ID=Msa1330420-mRNA-1:cds;Parent=Msa1330420-mRNA-1
chr8_4 CDS 49566176 49566182 49566176 ID=Msa1330420-mRNA-1:cds;Parent=Msa1330420-mRNA-1
chr8_4 CDS 49566782 49567014 49566782 ID=Msa1330420-mRNA-1:cds;Parent=Msa1330420-mRNA-1
chr8_4 CDS 49567019 49567105 49567019 ID=Msa1330420-mRNA-1:cds;Parent=Msa1330420-mRNA-1
chr8_4 CDS 49567703 49567885 49567703 ID=Msa1330420-mRNA-1:cds;Parent=Msa1330420-mRNA-1
Gene Sequence

>Msa1330420

ATGAAAATGGTAGAAGAGAAAATCATAGATACTGCAATTAAGACAGACATTCAAGGAGGAATAATAAATGTTTCTTCAGGAATTCATAGCTTGGTGAAAAGAACTTGCTTTTGTTTCAAAGACATGCTCGATGGAAAAAAGTACAATCACCATTTGCTTCCTTTTTCTGCAAAATTAAGAAAAAGTTCTATAATTGCATTAAATTATAGATACTATAATCAATCTAACTCCGTTTTACATAACAAAAATTTACAAACTTACAATGGGACACGCGGATATGCTCAATCGAAATTAGCCATGATTCTGCATGTGAAGAAAATGGCTAGACAACTAAAAGGTGCATCGACAACTTGTTATGTTGCGATTATCCAACAAATAGAAGGGGTGAATGGGAAATATTTTACTGATTGCAACGAGAGTAACTGCTCAAGTCTTGCAAACAACAAATCAGAAGCTAAAAAGCTTTGGAACAATACTAATACCTTACTTCATGAACAACTAATGGCGTGTTTCGACTGA

Protein sequence

>Msa1330420

MKMVEEKIIDTAIKTDIQGGIINVSSGIHSLVKRTCFCFKDMLDGKKYNHHLLPFSAKLRKSSIIALNYRYYNQSNSVLHNKNLQTYNGTRGYAQSKLAMILHVKKMARQLKGASTTCYVAIIQQIEGVNGKYFTDCNESNCSSLANNKSEAKKLWNNTNTLLHEQLMACFD*