Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277220 | XP_003627466.2 | 95.732 | 164 | 7 | 0 | 1 | 164 | 1 | 164 | 1.03e-111 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277220 | G7L9W5 | 95.732 | 164 | 7 | 0 | 1 | 164 | 1 | 164 | 4.92e-112 | 324 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1277220 | 0.858464 | 8.091648e-63 | -8.615850e-47 |
| Msa0001940 | Msa1277220 | 0.825778 | 3.894514e-54 | -8.615850e-47 |
| Msa0002580 | Msa1277220 | 0.835652 | 1.481465e-56 | -8.615850e-47 |
| Msa0005890 | Msa1277220 | 0.818246 | 2.166931e-52 | -8.615850e-47 |
| Msa0009180 | Msa1277220 | 0.805181 | 1.511277e-49 | -8.615850e-47 |
| Msa0017950 | Msa1277220 | 0.833375 | 5.529070e-56 | -8.615850e-47 |
| Msa0021500 | Msa1277220 | 0.805248 | 1.462833e-49 | -8.615850e-47 |
| Msa0024000 | Msa1277220 | 0.808533 | 2.955591e-50 | -8.615850e-47 |
| Msa0024550 | Msa1277220 | 0.802550 | 5.318972e-49 | -8.615850e-47 |
| Msa0027820 | Msa1277220 | 0.811749 | 5.993065e-51 | -8.615850e-47 |
| Msa0028420 | Msa1277220 | 0.808489 | 3.020981e-50 | -8.615850e-47 |
| Msa0030370 | Msa1277220 | 0.800079 | 1.705102e-48 | -8.615850e-47 |
| Msa0032920 | Msa1277220 | -0.800427 | 1.448415e-48 | -8.615850e-47 |
| Msa0034810 | Msa1277220 | 0.825347 | 4.926623e-54 | -8.615850e-47 |
| Msa0035060 | Msa1277220 | 0.801797 | 7.600010e-49 | -8.615850e-47 |
| Msa0045790 | Msa1277220 | 0.801735 | 7.826689e-49 | -8.615850e-47 |
| Msa0049790 | Msa1277220 | 0.802929 | 4.442183e-49 | -8.615850e-47 |
| Msa0054690 | Msa1277220 | 0.801817 | 7.529989e-49 | -8.615850e-47 |
| Msa0081520 | Msa1277220 | 0.827119 | 1.865218e-54 | -8.615850e-47 |
| Msa0094780 | Msa1277220 | 0.806701 | 7.238229e-50 | -8.615850e-47 |
| Msa0097770 | Msa1277220 | 0.812923 | 3.320892e-51 | -8.615850e-47 |
| Msa0108410 | Msa1277220 | 0.812300 | 4.544788e-51 | -8.615850e-47 |
| Msa0120400 | Msa1277220 | 0.807527 | 4.839854e-50 | -8.615850e-47 |
| Msa0611210 | Msa1277220 | 0.822964 | 1.787483e-53 | -8.615850e-47 |
| Msa0623330 | Msa1277220 | 0.808312 | 3.295292e-50 | -8.615850e-47 |
| Msa0626450 | Msa1277220 | 0.857493 | 1.572524e-62 | -8.615850e-47 |
| Msa0626490 | Msa1277220 | 0.852535 | 4.331474e-61 | -8.615850e-47 |
| Msa0626510 | Msa1277220 | 0.820416 | 6.937977e-53 | -8.615850e-47 |
| Msa0638480 | Msa1277220 | 0.806967 | 6.361160e-50 | -8.615850e-47 |
| Msa0644410 | Msa1277220 | 0.811298 | 7.507093e-51 | -8.615850e-47 |
| Msa0651550 | Msa1277220 | 0.824919 | 6.218475e-54 | -8.615850e-47 |
| Msa0663390 | Msa1277220 | 0.802687 | 4.984747e-49 | -8.615850e-47 |
| Msa0664600 | Msa1277220 | 0.853029 | 3.130601e-61 | -8.615850e-47 |
| Msa0697160 | Msa1277220 | 0.828330 | 9.543699e-55 | -8.615850e-47 |
| Msa0701700 | Msa1277220 | 0.804965 | 1.677125e-49 | -8.615850e-47 |
| Msa0707250 | Msa1277220 | 0.802522 | 5.391992e-49 | -8.615850e-47 |
| Msa0711430 | Msa1277220 | 0.801094 | 1.058995e-48 | -8.615850e-47 |
| Msa0715060 | Msa1277220 | 0.803931 | 2.754100e-49 | -8.615850e-47 |
| Msa0721080 | Msa1277220 | 0.818667 | 1.738935e-52 | -8.615850e-47 |
| Msa0725770 | Msa1277220 | 0.817719 | 2.849461e-52 | -8.615850e-47 |
| Msa0727640 | Msa1277220 | 0.817244 | 3.646560e-52 | -8.615850e-47 |
| Msa0733390 | Msa1277220 | 0.807851 | 4.129573e-50 | -8.615850e-47 |
| Msa0736960 | Msa1277220 | 0.830612 | 2.662624e-55 | -8.615850e-47 |
| Msa0741220 | Msa1277220 | 0.842791 | 2.083440e-58 | -8.615850e-47 |
| Msa0756490 | Msa1277220 | 0.806596 | 7.618915e-50 | -8.615850e-47 |
| Msa0761670 | Msa1277220 | 0.805966 | 1.034233e-49 | -8.615850e-47 |
| Msa0768990 | Msa1277220 | 0.813308 | 2.733999e-51 | -8.615850e-47 |
| Msa0769180 | Msa1277220 | 0.809928 | 1.484956e-50 | -8.615850e-47 |
| Msa0770720 | Msa1277220 | 0.805977 | 1.028615e-49 | -8.615850e-47 |
| Msa0778590 | Msa1277220 | 0.842203 | 2.983775e-58 | -8.615850e-47 |
| Msa0795870 | Msa1277220 | 0.870639 | 1.253137e-66 | -8.615850e-47 |
| Msa0807260 | Msa1277220 | 0.803051 | 4.191425e-49 | -8.615850e-47 |
| Msa0811960 | Msa1277220 | 0.805644 | 1.208563e-49 | -8.615850e-47 |
| Msa0815960 | Msa1277220 | 0.844188 | 8.825171e-59 | -8.615850e-47 |
| Msa0823820 | Msa1277220 | 0.806619 | 7.533420e-50 | -8.615850e-47 |
| Msa0829300 | Msa1277220 | 0.816289 | 5.972410e-52 | -8.615850e-47 |
| Msa0829330 | Msa1277220 | 0.816914 | 4.325371e-52 | -8.615850e-47 |
| Msa0832120 | Msa1277220 | 0.804940 | 1.697270e-49 | -8.615850e-47 |
| Msa0833530 | Msa1277220 | 0.809635 | 1.716407e-50 | -8.615850e-47 |
| Msa0833650 | Msa1277220 | 0.867302 | 1.512862e-65 | -8.615850e-47 |
| Msa0835490 | Msa1277220 | 0.825659 | 4.155236e-54 | -8.615850e-47 |
| Msa0124060 | Msa1277220 | 0.806925 | 6.490023e-50 | -8.615850e-47 |
| Msa0124280 | Msa1277220 | 0.801201 | 1.006686e-48 | -8.615850e-47 |
| Msa0131900 | Msa1277220 | 0.808198 | 3.485169e-50 | -8.615850e-47 |
| Msa0133280 | Msa1277220 | 0.806912 | 6.531966e-50 | -8.615850e-47 |
| Msa0136650 | Msa1277220 | 0.814740 | 1.320932e-51 | -8.615850e-47 |
| Msa0168500 | Msa1277220 | 0.808424 | 3.118971e-50 | -8.615850e-47 |
| Msa0173890 | Msa1277220 | 0.814228 | 1.714010e-51 | -8.615850e-47 |
| Msa0174450 | Msa1277220 | 0.836414 | 9.490507e-57 | -8.615850e-47 |
| Msa0211150 | Msa1277220 | 0.801880 | 7.307857e-49 | -8.615850e-47 |
| Msa0221000 | Msa1277220 | 0.861727 | 8.375065e-64 | -8.615850e-47 |
| Msa0225100 | Msa1277220 | 0.861456 | 1.012704e-63 | -8.615850e-47 |
| Msa0225680 | Msa1277220 | 0.802282 | 6.042279e-49 | -8.615850e-47 |
| Msa0225860 | Msa1277220 | 0.857416 | 1.656718e-62 | -8.615850e-47 |
| Msa1225860 | Msa1277220 | -0.829327 | 5.477402e-55 | -8.615850e-47 |
| Msa1228200 | Msa1277220 | 0.862767 | 4.012687e-64 | -8.615850e-47 |
| Msa1236410 | Msa1277220 | 0.803513 | 3.363886e-49 | -8.615850e-47 |
| Msa1238820 | Msa1277220 | 0.807292 | 5.427006e-50 | -8.615850e-47 |
| Msa1253550 | Msa1277220 | 0.803322 | 3.684519e-49 | -8.615850e-47 |
| Msa1263490 | Msa1277220 | 0.828315 | 9.626744e-55 | -8.615850e-47 |
| Msa1265650 | Msa1277220 | 0.835060 | 2.090724e-56 | -8.615850e-47 |
| Msa1267770 | Msa1277220 | 0.816639 | 4.985389e-52 | -8.615850e-47 |
| Msa1271270 | Msa1277220 | 0.829722 | 4.390933e-55 | -8.615850e-47 |
| Msa1276660 | Msa1277220 | 0.808381 | 3.185699e-50 | -8.615850e-47 |
| Msa1277220 | Msa1293870 | 0.814591 | 1.424912e-51 | -8.615850e-47 |
| Msa1277220 | Msa1297230 | 0.854517 | 1.167963e-61 | -8.615850e-47 |
| Msa1277220 | Msa1298370 | 0.820567 | 6.407782e-53 | -8.615850e-47 |
| Msa1277220 | Msa1303560 | 0.843136 | 1.686583e-58 | -8.615850e-47 |
| Msa1277220 | Msa1303650 | 0.841854 | 3.690120e-58 | -8.615850e-47 |
| Msa1277220 | Msa1314650 | 0.816294 | 5.957105e-52 | -8.615850e-47 |
| Msa1277220 | Msa1315590 | 0.890132 | 1.298511e-73 | -8.615850e-47 |
| Msa1277220 | Msa1320670 | 0.815462 | 9.132977e-52 | -8.615850e-47 |
| Msa1277220 | Msa1328710 | 0.809365 | 1.961360e-50 | -8.615850e-47 |
| Msa1277220 | Msa1330420 | 0.823500 | 1.339264e-53 | -8.615850e-47 |
| Msa1277220 | Msa1343430 | 0.858886 | 6.054934e-63 | -8.615850e-47 |
| Msa1277220 | Msa1346560 | 0.815109 | 1.094147e-51 | -8.615850e-47 |
| Msa1277220 | Msa1348090 | 0.838108 | 3.497971e-57 | -8.615850e-47 |
| Msa1277220 | Msa1356830 | 0.807901 | 4.030152e-50 | -8.615850e-47 |
| Msa1277220 | Msa1366340 | 0.803163 | 3.974111e-49 | -8.615850e-47 |
| Msa1277220 | Msa1372040 | 0.833370 | 5.546054e-56 | -8.615850e-47 |
| Msa1277220 | Msa1385890 | 0.813826 | 2.102572e-51 | -8.615850e-47 |
| Msa1277220 | Msa1387620 | 0.808083 | 3.686687e-50 | -8.615850e-47 |
| Msa1277220 | Msa1389770 | 0.800904 | 1.158014e-48 | -8.615850e-47 |
| Msa1277220 | Msa1392580 | 0.810050 | 1.397229e-50 | -8.615850e-47 |
| Msa1277220 | Msa1397400 | 0.821357 | 4.214627e-53 | -8.615850e-47 |
| Msa1277220 | Msa1405460 | 0.811673 | 6.224937e-51 | -8.615850e-47 |
| Msa1277220 | Msa1415540 | 0.806730 | 7.139308e-50 | -8.615850e-47 |
| Msa1277220 | Msa1420950 | 0.810029 | 1.412356e-50 | -8.615850e-47 |
| Msa1277220 | Msa1425880 | 0.833789 | 4.358336e-56 | -8.615850e-47 |
| Msa1277220 | Msa1432500 | 0.815957 | 7.084255e-52 | -8.615850e-47 |
| Msa1277220 | Msa1433810 | 0.817004 | 4.129342e-52 | -8.615850e-47 |
| Msa1277220 | Msa1437940 | 0.808039 | 3.766912e-50 | -8.615850e-47 |
| Msa1277220 | Msa1440310 | 0.816498 | 5.362375e-52 | -8.615850e-47 |
| Msa1277220 | Msa1440880 | 0.810831 | 9.479086e-51 | -8.615850e-47 |
| Msa1277220 | Msa1440960 | 0.851891 | 6.603815e-61 | -8.615850e-47 |
| Msa1277220 | Msa1449480 | 0.820377 | 7.082940e-53 | -8.615850e-47 |
| Msa1277220 | Msa1450100 | 0.834866 | 2.338883e-56 | -8.615850e-47 |
| Msa1277220 | Msa1451160 | 0.819251 | 1.280969e-52 | -8.615850e-47 |
| Msa1277220 | Msa1464810 | 0.802753 | 4.829675e-49 | -8.615850e-47 |
| Msa0365100 | Msa1277220 | 0.815301 | 9.915469e-52 | -8.615850e-47 |
| Msa0367870 | Msa1277220 | 0.805511 | 1.288785e-49 | -8.615850e-47 |
| Msa0369790 | Msa1277220 | 0.825013 | 5.908349e-54 | -8.615850e-47 |
| Msa0371170 | Msa1277220 | 0.803268 | 3.780826e-49 | -8.615850e-47 |
| Msa0378720 | Msa1277220 | 0.875005 | 4.330810e-68 | -8.615850e-47 |
| Msa0380620 | Msa1277220 | 0.820104 | 8.180298e-53 | -8.615850e-47 |
| Msa0403640 | Msa1277220 | 0.821211 | 4.555724e-53 | -8.615850e-47 |
| Msa0417880 | Msa1277220 | 0.808541 | 2.944119e-50 | -8.615850e-47 |
| Msa0425170 | Msa1277220 | 0.822505 | 2.285428e-53 | -8.615850e-47 |
| Msa0428370 | Msa1277220 | 0.860505 | 1.970986e-63 | -8.615850e-47 |
| Msa0428920 | Msa1277220 | 0.814592 | 1.424728e-51 | -8.615850e-47 |
| Msa0430260 | Msa1277220 | 0.823057 | 1.699841e-53 | -8.615850e-47 |
| Msa0436910 | Msa1277220 | 0.841101 | 5.826315e-58 | -8.615850e-47 |
| Msa0440440 | Msa1277220 | 0.804030 | 2.627119e-49 | -8.615850e-47 |
| Msa0464000 | Msa1277220 | 0.821601 | 3.701486e-53 | -8.615850e-47 |
| Msa0467490 | Msa1277220 | 0.804476 | 2.120845e-49 | -8.615850e-47 |
| Msa0472950 | Msa1277220 | 0.811313 | 7.452112e-51 | -8.615850e-47 |
| Msa0474730 | Msa1277220 | 0.860049 | 2.706960e-63 | -8.615850e-47 |
| Msa0479170 | Msa1277220 | 0.817179 | 3.770515e-52 | -8.615850e-47 |
| Msa1019430 | Msa1277220 | 0.833389 | 5.483754e-56 | -8.615850e-47 |
| Msa1019470 | Msa1277220 | 0.850946 | 1.221792e-60 | -8.615850e-47 |
| Msa1020480 | Msa1277220 | 0.811688 | 6.178934e-51 | -8.615850e-47 |
| Msa1020510 | Msa1277220 | 0.825575 | 4.350030e-54 | -8.615850e-47 |
| Msa1020670 | Msa1277220 | 0.807926 | 3.982262e-50 | -8.615850e-47 |
| Msa1023500 | Msa1277220 | 0.821832 | 3.273187e-53 | -8.615850e-47 |
| Msa1023570 | Msa1277220 | 0.800840 | 1.193334e-48 | -8.615850e-47 |
| Msa1031930 | Msa1277220 | 0.805208 | 1.491857e-49 | -8.615850e-47 |
| Msa1039020 | Msa1277220 | 0.815002 | 1.155273e-51 | -8.615850e-47 |
| Msa1043370 | Msa1277220 | 0.801810 | 7.553298e-49 | -8.615850e-47 |
| Msa1044680 | Msa1277220 | 0.807872 | 4.088411e-50 | -8.615850e-47 |
| Msa1072940 | Msa1277220 | 0.838531 | 2.721251e-57 | -8.615850e-47 |
| Msa1078170 | Msa1277220 | 0.815639 | 8.339752e-52 | -8.615850e-47 |
| Msa1096960 | Msa1277220 | 0.815350 | 9.671234e-52 | -8.615850e-47 |
| Msa1101090 | Msa1277220 | 0.802937 | 4.426031e-49 | -8.615850e-47 |
| Msa0240900 | Msa1277220 | 0.806942 | 6.438488e-50 | -8.615850e-47 |
| Msa0242590 | Msa1277220 | 0.803024 | 4.245768e-49 | -8.615850e-47 |
| Msa0244640 | Msa1277220 | 0.862188 | 6.047486e-64 | -8.615850e-47 |
| Msa0254790 | Msa1277220 | 0.819148 | 1.351978e-52 | -8.615850e-47 |
| Msa0258310 | Msa1277220 | 0.806296 | 8.810935e-50 | -8.615850e-47 |
| Msa0260510 | Msa1277220 | 0.823844 | 1.112594e-53 | -8.615850e-47 |
| Msa0261340 | Msa1277220 | 0.818375 | 2.025827e-52 | -8.615850e-47 |
| Msa0265850 | Msa1277220 | 0.827176 | 1.807283e-54 | -8.615850e-47 |
| Msa0266180 | Msa1277220 | 0.837453 | 5.152620e-57 | -8.615850e-47 |
| Msa0266350 | Msa1277220 | 0.812248 | 4.664653e-51 | -8.615850e-47 |
| Msa0283330 | Msa1277220 | 0.829046 | 6.407229e-55 | -8.615850e-47 |
| Msa0287740 | Msa1277220 | 0.873785 | 1.123365e-67 | -8.615850e-47 |
| Msa0297790 | Msa1277220 | 0.802541 | 5.341424e-49 | -8.615850e-47 |
| Msa0298470 | Msa1277220 | 0.821133 | 4.747374e-53 | -8.615850e-47 |
| Msa0300270 | Msa1277220 | 0.846760 | 1.773569e-59 | -8.615850e-47 |
| Msa0300320 | Msa1277220 | 0.841024 | 6.104644e-58 | -8.615850e-47 |
| Msa0307270 | Msa1277220 | 0.842425 | 2.606186e-58 | -8.615850e-47 |
| Msa0321620 | Msa1277220 | 0.833031 | 6.736094e-56 | -8.615850e-47 |
| Msa0330380 | Msa1277220 | 0.802534 | 5.359123e-49 | -8.615850e-47 |
| Msa0337700 | Msa1277220 | 0.854137 | 1.503868e-61 | -8.615850e-47 |
| Msa0340500 | Msa1277220 | 0.819732 | 9.952934e-53 | -8.615850e-47 |
| Msa0341690 | Msa1277220 | 0.804972 | 1.671390e-49 | -8.615850e-47 |
| Msa0358890 | Msa1277220 | 0.811558 | 6.591961e-51 | -8.615850e-47 |
| Msa0363200 | Msa1277220 | 0.827732 | 1.330023e-54 | -8.615850e-47 |
| Msa1123380 | Msa1277220 | 0.815791 | 7.713355e-52 | -8.615850e-47 |
| Msa1132840 | Msa1277220 | 0.868828 | 4.885032e-66 | -8.615850e-47 |
| Msa1140210 | Msa1277220 | 0.832267 | 1.041907e-55 | -8.615850e-47 |
| Msa1140220 | Msa1277220 | 0.803886 | 2.814401e-49 | -8.615850e-47 |
| Msa1145810 | Msa1277220 | 0.812302 | 4.538948e-51 | -8.615850e-47 |
| Msa1155170 | Msa1277220 | -0.839709 | 1.347249e-57 | -8.615850e-47 |
| Msa1160920 | Msa1277220 | 0.839603 | 1.435834e-57 | -8.615850e-47 |
| Msa1167380 | Msa1277220 | 0.807132 | 5.869105e-50 | -8.615850e-47 |
| Msa1186020 | Msa1277220 | 0.836972 | 6.840144e-57 | -8.615850e-47 |
| Msa1193170 | Msa1277220 | 0.801859 | 7.380599e-49 | -8.615850e-47 |
| Msa1199570 | Msa1277220 | 0.808823 | 2.562722e-50 | -8.615850e-47 |
| Msa1200890 | Msa1277220 | 0.807197 | 5.686263e-50 | -8.615850e-47 |
| Msa1205280 | Msa1277220 | 0.822774 | 1.978954e-53 | -8.615850e-47 |
| Msa1208950 | Msa1277220 | 0.826163 | 3.154681e-54 | -8.615850e-47 |
| Msa1223570 | Msa1277220 | 0.814556 | 1.450977e-51 | -8.615850e-47 |
| Msa0483100 | Msa1277220 | 0.817834 | 2.685262e-52 | -8.615850e-47 |
| Msa0500380 | Msa1277220 | 0.810413 | 1.166856e-50 | -8.615850e-47 |
| Msa0509550 | Msa1277220 | 0.811357 | 7.291949e-51 | -8.615850e-47 |
| Msa0519830 | Msa1277220 | 0.802658 | 5.052993e-49 | -8.615850e-47 |
| Msa0528570 | Msa1277220 | 0.822624 | 2.144046e-53 | -8.615850e-47 |
| Msa0529030 | Msa1277220 | 0.814755 | 1.311036e-51 | -8.615850e-47 |
| Msa0532070 | Msa1277220 | 0.802615 | 5.158817e-49 | -8.615850e-47 |
| Msa0546500 | Msa1277220 | 0.803090 | 4.115404e-49 | -8.615850e-47 |
| Msa0548470 | Msa1277220 | 0.832940 | 7.094038e-56 | -8.615850e-47 |
| Msa0557460 | Msa1277220 | 0.838995 | 2.064681e-57 | -8.615850e-47 |
| Msa0569200 | Msa1277220 | 0.807854 | 4.123644e-50 | -8.615850e-47 |
| Msa0571290 | Msa1277220 | 0.825527 | 4.465929e-54 | -8.615850e-47 |
| Msa0580370 | Msa1277220 | 0.867304 | 1.510165e-65 | -8.615850e-47 |
| Msa0581470 | Msa1277220 | 0.832706 | 8.110982e-56 | -8.615850e-47 |
| Msa0583360 | Msa1277220 | -0.826823 | 2.195797e-54 | -8.615850e-47 |
| Msa0585560 | Msa1277220 | 0.801799 | 7.593687e-49 | -8.615850e-47 |
| Msa0587620 | Msa1277220 | 0.822973 | 1.778530e-53 | -8.615850e-47 |
| Msa0590830 | Msa1277220 | 0.820141 | 8.021041e-53 | -8.615850e-47 |
| Msa0597790 | Msa1277220 | 0.814973 | 1.172620e-51 | -8.615850e-47 |
| Msa0600930 | Msa1277220 | 0.807652 | 4.552706e-50 | -8.615850e-47 |
| Msa0861510 | Msa1277220 | 0.825384 | 4.827226e-54 | -8.615850e-47 |
| Msa0861600 | Msa1277220 | 0.833352 | 5.602076e-56 | -8.615850e-47 |
| Msa0863010 | Msa1277220 | 0.806624 | 7.516877e-50 | -8.615850e-47 |
| Msa0866520 | Msa1277220 | 0.823812 | 1.132039e-53 | -8.615850e-47 |
| Msa0875290 | Msa1277220 | 0.819886 | 9.174994e-53 | -8.615850e-47 |
| Msa0898750 | Msa1277220 | 0.800263 | 1.564182e-48 | -8.615850e-47 |
| Msa0902510 | Msa1277220 | 0.827854 | 1.243228e-54 | -8.615850e-47 |
| Msa0945110 | Msa1277220 | 0.802064 | 6.697781e-49 | -8.615850e-47 |
| Msa0960600 | Msa1277220 | 0.822075 | 2.875412e-53 | -8.615850e-47 |
| Msa0967380 | Msa1277220 | 0.816902 | 4.351915e-52 | -8.615850e-47 |
| Msa0967870 | Msa1277220 | 0.866923 | 1.998579e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277220 | MtrunA17_Chr8g0345341 | 95.732 | 164 | 7 | 0 | 1 | 164 | 1 | 164 | 9.47e-116 | 324 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCACAATACTAGCATATT+TGG | 0.216447 | 8_3:-12420560 | Msa1277220:three_prime_UTR |
| TTAAACAAACTTGTTATTAA+AGG | 0.220128 | 8_3:+12420751 | None:intergenic |
| GTTATTAAAGGTCCAGAAAA+TGG | 0.227908 | 8_3:+12420763 | None:intergenic |
| TTTAGCTATAGATTTGTTAT+TGG | 0.228772 | 8_3:+12420864 | None:intergenic |
| TTCTCTTCTGATCTCTTTGT+TGG | 0.245231 | 8_3:+12420727 | None:intergenic |
| CTTCCCATCATAACCTTTGT+AGG | 0.252175 | 8_3:+12420795 | None:intergenic |
| AAAAGACAAGGCCATGTTTC+TGG | 0.267409 | 8_3:-12420832 | Msa1277220:CDS |
| TTTCCCTTTCTCACTTTCTC+TGG | 0.320462 | 8_3:+12420955 | None:intergenic |
| TTTGTAACTGGATTTGATTA+AGG | 0.326935 | 8_3:-12420386 | Msa1277220:three_prime_UTR |
| ACATTAACTTCATTCTATAT+AGG | 0.343615 | 8_3:-12422445 | Msa1277220:five_prime_UTR |
| TGTTGATGGAGAGTCATATA+AGG | 0.356203 | 8_3:+12420697 | None:intergenic |
| GGAAAAGTTCCCTGGTTTCA+TGG | 0.375096 | 8_3:-12420924 | Msa1277220:CDS |
| CCAATGCATTATGATGACTA+TGG | 0.396163 | 8_3:-12421594 | Msa1277220:CDS |
| CCTCATCCTGTTCAAAACTA+TGG | 0.408153 | 8_3:-12420667 | Msa1277220:CDS |
| AACTCCTACAAAGGTTATGA+TGG | 0.409233 | 8_3:-12420799 | Msa1277220:CDS |
| TGTGTAGATGGATAATCCTT+AGG | 0.411445 | 8_3:-12421721 | Msa1277220:intron |
| CCTTTGTAGGAGTTAAGTAT+TGG | 0.416425 | 8_3:+12420808 | None:intergenic |
| AGGACCAGAGAAAGTGAGAA+AGG | 0.425794 | 8_3:-12420959 | Msa1277220:CDS |
| ATGAAGTTTGATAGTTCCTA+AGG | 0.441554 | 8_3:+12421705 | None:intergenic |
| CCAGTAGTATGTGCTATTGT+CGG | 0.455206 | 8_3:-12420502 | Msa1277220:three_prime_UTR |
| CTATGGATTTGATCTGCAAC+AGG | 0.457681 | 8_3:-12421577 | Msa1277220:CDS |
| AAACTATGGTCCTCTTTATG+TGG | 0.476561 | 8_3:-12420653 | Msa1277220:CDS |
| TGAGAAAGGGAAAGAAATCA+TGG | 0.486173 | 8_3:-12420945 | Msa1277220:CDS |
| GGACCAGAGAAAGTGAGAAA+GGG | 0.486612 | 8_3:-12420958 | Msa1277220:CDS |
| TAAGGTATATTCTATTACAT+TGG | 0.488038 | 8_3:+12420423 | None:intergenic |
| CAAGTTTCCACCATGAAACC+AGG | 0.489863 | 8_3:+12420914 | None:intergenic |
| AGCTAAGTAACCACATAAAG+AGG | 0.494979 | 8_3:+12420643 | None:intergenic |
| CTAGTTTCTGGCTGAAGCAA+AGG | 0.513346 | 8_3:-12421046 | Msa1277220:intron |
| GAAACTTGACAAGAAAAGTA+AGG | 0.522042 | 8_3:-12420899 | Msa1277220:CDS |
| GAAATCATGGAAAAGTTCCC+TGG | 0.522925 | 8_3:-12420932 | Msa1277220:CDS |
| CAAAATCATTCATCTCACTA+AGG | 0.548410 | 8_3:+12420405 | None:intergenic |
| CCATAGTCATCATAATGCAT+TGG | 0.555126 | 8_3:+12421594 | None:intergenic |
| CCAATACTTAACTCCTACAA+AGG | 0.560845 | 8_3:-12420808 | Msa1277220:CDS |
| TCAACAGTGTACCCTGAAGA+AGG | 0.568735 | 8_3:-12420994 | Msa1277220:CDS |
| CCGACAATAGCACATACTAC+TGG | 0.575618 | 8_3:+12420502 | None:intergenic |
| ACTCCTACAAAGGTTATGAT+GGG | 0.578643 | 8_3:-12420798 | Msa1277220:CDS |
| CTGGCTGAAGCAAAGGAGCA+TGG | 0.602825 | 8_3:-12421039 | Msa1277220:CDS |
| GCATCGACACTTCAGATCGA+AGG | 0.629175 | 8_3:-12420599 | Msa1277220:three_prime_UTR |
| CTTCAGATCGAAGGTGTCAG+TGG | 0.635105 | 8_3:-12420590 | Msa1277220:three_prime_UTR |
| TAAGTATTGGACCAGAAACA+TGG | 0.636616 | 8_3:+12420821 | None:intergenic |
| AAAGTTCCCTGGTTTCATGG+TGG | 0.673568 | 8_3:-12420921 | Msa1277220:CDS |
| GAAGGTGTCAGTGGTAGACA+CGG | 0.679806 | 8_3:-12420581 | Msa1277220:three_prime_UTR |
| AAGTTTCCACCATGAAACCA+GGG | 0.691429 | 8_3:+12420915 | None:intergenic |
| AAAGTTTCTGAGAAAAGACA+AGG | 0.701580 | 8_3:-12420844 | Msa1277220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAATCACTATA+AGG | + | chr8_3:12420709-12420728 | None:intergenic | 10.0% |
| !!! | AAATTGATAATATTATCTAA+TGG | - | chr8_3:12421640-12421659 | Msa1277220:exon | 10.0% |
| !! | AAAAAATTAAAATCACTATA+AGG | + | chr8_3:12420709-12420728 | None:intergenic | 10.0% |
| !!! | AAATTGATAATATTATCTAA+TGG | - | chr8_3:12421640-12421659 | Msa1277220:exon | 10.0% |
| !! | AGTTTATTATATTTGTAGAT+AGG | - | chr8_3:12420664-12420683 | Msa1277220:CDS | 15.0% |
| !!! | TTAAACAAACTTGTTATTAA+AGG | + | chr8_3:12422048-12422067 | None:intergenic | 15.0% |
| !! | AGTTTATTATATTTGTAGAT+AGG | - | chr8_3:12420664-12420683 | Msa1277220:CDS | 15.0% |
| !!! | TTAAACAAACTTGTTATTAA+AGG | + | chr8_3:12422048-12422067 | None:intergenic | 15.0% |
| !! | ACATTAACTTCATTCTATAT+AGG | - | chr8_3:12420351-12420370 | Msa1277220:three_prime_UTR | 20.0% |
| !!! | ATTCTATATAGGATCTTTTT+TGG | - | chr8_3:12420362-12420381 | Msa1277220:three_prime_UTR | 20.0% |
| !!! | ACCATTTTGTTATTCTTTAT+TGG | - | chr8_3:12420729-12420748 | Msa1277220:CDS | 20.0% |
| !! | GCATTATTAGTATAGTAATT+TGG | - | chr8_3:12420751-12420770 | Msa1277220:CDS | 20.0% |
| !! | TAAAACCAAAATTTATACCA+GGG | + | chr8_3:12421251-12421270 | None:intergenic | 20.0% |
| !! | TTAAAACCAAAATTTATACC+AGG | + | chr8_3:12421252-12421271 | None:intergenic | 20.0% |
| !!! | TTTAGAGTTTTACAAAATCA+CGG | - | chr8_3:12421329-12421348 | Msa1277220:intron | 20.0% |
| !!! | TTTAGCTATAGATTTGTTAT+TGG | + | chr8_3:12421935-12421954 | None:intergenic | 20.0% |
| !! | TAAGGTATATTCTATTACAT+TGG | + | chr8_3:12422376-12422395 | None:intergenic | 20.0% |
| !! | ACATTAACTTCATTCTATAT+AGG | - | chr8_3:12420351-12420370 | Msa1277220:three_prime_UTR | 20.0% |
| !!! | ATTCTATATAGGATCTTTTT+TGG | - | chr8_3:12420362-12420381 | Msa1277220:three_prime_UTR | 20.0% |
| !!! | ACCATTTTGTTATTCTTTAT+TGG | - | chr8_3:12420729-12420748 | Msa1277220:CDS | 20.0% |
| !! | GCATTATTAGTATAGTAATT+TGG | - | chr8_3:12420751-12420770 | Msa1277220:CDS | 20.0% |
| !! | TAAAACCAAAATTTATACCA+GGG | + | chr8_3:12421251-12421270 | None:intergenic | 20.0% |
| !! | TTAAAACCAAAATTTATACC+AGG | + | chr8_3:12421252-12421271 | None:intergenic | 20.0% |
| !!! | TTTAGAGTTTTACAAAATCA+CGG | - | chr8_3:12421329-12421348 | Msa1277220:intron | 20.0% |
| !!! | TTTAGCTATAGATTTGTTAT+TGG | + | chr8_3:12421935-12421954 | None:intergenic | 20.0% |
| !! | TAAGGTATATTCTATTACAT+TGG | + | chr8_3:12422376-12422395 | None:intergenic | 20.0% |
| ! | GCCAATAAAGAATAACAAAA+TGG | + | chr8_3:12420733-12420752 | None:intergenic | 25.0% |
| ! | ATTAGTATAGTAATTTGGTC+AGG | - | chr8_3:12420756-12420775 | Msa1277220:CDS | 25.0% |
| ! | AAATTAATACACATGAGGTT+TGG | + | chr8_3:12420998-12421017 | None:intergenic | 25.0% |
| !! | TTTTGTGCAAGTTTGAATAA+CGG | - | chr8_3:12421482-12421501 | Msa1277220:intron | 25.0% |
| ! | TTAAAACTTCAACAAAACCA+CGG | + | chr8_3:12421533-12421552 | None:intergenic | 25.0% |
| !!! | AGATTTTCACTCTTTGATTT+TGG | - | chr8_3:12421721-12421740 | Msa1277220:intron | 25.0% |
| ! | TTTGTAACTGGATTTGATTA+AGG | - | chr8_3:12422410-12422429 | Msa1277220:five_prime_UTR | 25.0% |
| !!! | AATCTTGTGTTTTAAGAAGT+TGG | - | chr8_3:12422470-12422489 | Msa1277220:five_prime_UTR | 25.0% |
| ! | GCCAATAAAGAATAACAAAA+TGG | + | chr8_3:12420733-12420752 | None:intergenic | 25.0% |
| ! | ATTAGTATAGTAATTTGGTC+AGG | - | chr8_3:12420756-12420775 | Msa1277220:CDS | 25.0% |
| ! | AAATTAATACACATGAGGTT+TGG | + | chr8_3:12420998-12421017 | None:intergenic | 25.0% |
| !! | TTTTGTGCAAGTTTGAATAA+CGG | - | chr8_3:12421482-12421501 | Msa1277220:intron | 25.0% |
| ! | TTAAAACTTCAACAAAACCA+CGG | + | chr8_3:12421533-12421552 | None:intergenic | 25.0% |
| !!! | AGATTTTCACTCTTTGATTT+TGG | - | chr8_3:12421721-12421740 | Msa1277220:intron | 25.0% |
| ! | TTTGTAACTGGATTTGATTA+AGG | - | chr8_3:12422410-12422429 | Msa1277220:five_prime_UTR | 25.0% |
| ! | ATTATTCTTTTTGCCAGTTC+AGG | - | chr8_3:12420500-12420519 | Msa1277220:three_prime_UTR | 30.0% |
| ATTAATGCACCTTCTGATTA+AGG | - | chr8_3:12420832-12420851 | Msa1277220:CDS | 30.0% | |
| AAGAAATTGCCTTAATCAGA+AGG | + | chr8_3:12420844-12420863 | None:intergenic | 30.0% | |
| GAAAAGAAATCAATGTCACA+TGG | + | chr8_3:12420931-12420950 | None:intergenic | 30.0% | |
| TACTATGTGGATGTACAAAA+GGG | + | chr8_3:12420971-12420990 | None:intergenic | 30.0% | |
| TTACTATGTGGATGTACAAA+AGG | + | chr8_3:12420972-12420991 | None:intergenic | 30.0% | |
| !! | TGTGTATTAATTTGCTGCTA+AGG | - | chr8_3:12421005-12421024 | Msa1277220:CDS | 30.0% |
| AATGTCTCATCTCATTGTAA+TGG | + | chr8_3:12421048-12421067 | None:intergenic | 30.0% | |
| ! | ACATTGTTCTTTTGTGTAGA+TGG | - | chr8_3:12421063-12421082 | Msa1277220:intron | 30.0% |
| ! | ATGAAGTTTGATAGTTCCTA+AGG | + | chr8_3:12421094-12421113 | None:intergenic | 30.0% |
| ! | CTCTTGAAGTTTTCATATCT+TGG | - | chr8_3:12421117-12421136 | Msa1277220:intron | 30.0% |
| ! | CTTTTCCCTGGTATAAATTT+TGG | - | chr8_3:12421243-12421262 | Msa1277220:intron | 30.0% |
| AAACACAGTTACTACATGTT+TGG | - | chr8_3:12421270-12421289 | Msa1277220:intron | 30.0% | |
| TTACTACATGTTTGGATTCA+CGG | - | chr8_3:12421278-12421297 | Msa1277220:intron | 30.0% | |
| ! | ACTAACTGCATTTGAAATCA+TGG | + | chr8_3:12421379-12421398 | None:intergenic | 30.0% |
| TGGTGAATTTGACATAATCA+GGG | + | chr8_3:12421588-12421607 | None:intergenic | 30.0% | |
| ATGGTGAATTTGACATAATC+AGG | + | chr8_3:12421589-12421608 | None:intergenic | 30.0% | |
| ! | TTTTCTTAGATCCTTCTTCA+GGG | + | chr8_3:12421816-12421835 | None:intergenic | 30.0% |
| ! | TTTTTCTTAGATCCTTCTTC+AGG | + | chr8_3:12421817-12421836 | None:intergenic | 30.0% |
| GAAGAAGGATCTAAGAAAAA+AGG | - | chr8_3:12421817-12421836 | Msa1277220:intron | 30.0% | |
| GAAACTTGACAAGAAAAGTA+AGG | - | chr8_3:12421897-12421916 | Msa1277220:intron | 30.0% | |
| ! | AAAGTTTCTGAGAAAAGACA+AGG | - | chr8_3:12421952-12421971 | Msa1277220:intron | 30.0% |
| ! | AAGCAAAAGAATCCATTTTC+TGG | - | chr8_3:12422021-12422040 | Msa1277220:intron | 30.0% |
| GTTATTAAAGGTCCAGAAAA+TGG | + | chr8_3:12422036-12422055 | None:intergenic | 30.0% | |
| CAAAATCATTCATCTCACTA+AGG | + | chr8_3:12422394-12422413 | None:intergenic | 30.0% | |
| ! | GAGATGAATGATTTTGTAAC+TGG | - | chr8_3:12422398-12422417 | Msa1277220:five_prime_UTR | 30.0% |
| ! | ATTATTCTTTTTGCCAGTTC+AGG | - | chr8_3:12420500-12420519 | Msa1277220:three_prime_UTR | 30.0% |
| ATTAATGCACCTTCTGATTA+AGG | - | chr8_3:12420832-12420851 | Msa1277220:CDS | 30.0% | |
| AAGAAATTGCCTTAATCAGA+AGG | + | chr8_3:12420844-12420863 | None:intergenic | 30.0% | |
| GAAAAGAAATCAATGTCACA+TGG | + | chr8_3:12420931-12420950 | None:intergenic | 30.0% | |
| TACTATGTGGATGTACAAAA+GGG | + | chr8_3:12420971-12420990 | None:intergenic | 30.0% | |
| TTACTATGTGGATGTACAAA+AGG | + | chr8_3:12420972-12420991 | None:intergenic | 30.0% | |
| !! | TGTGTATTAATTTGCTGCTA+AGG | - | chr8_3:12421005-12421024 | Msa1277220:CDS | 30.0% |
| AATGTCTCATCTCATTGTAA+TGG | + | chr8_3:12421048-12421067 | None:intergenic | 30.0% | |
| ! | ACATTGTTCTTTTGTGTAGA+TGG | - | chr8_3:12421063-12421082 | Msa1277220:intron | 30.0% |
| ! | ATGAAGTTTGATAGTTCCTA+AGG | + | chr8_3:12421094-12421113 | None:intergenic | 30.0% |
| ! | CTCTTGAAGTTTTCATATCT+TGG | - | chr8_3:12421117-12421136 | Msa1277220:intron | 30.0% |
| ! | CTTTTCCCTGGTATAAATTT+TGG | - | chr8_3:12421243-12421262 | Msa1277220:intron | 30.0% |
| AAACACAGTTACTACATGTT+TGG | - | chr8_3:12421270-12421289 | Msa1277220:intron | 30.0% | |
| TTACTACATGTTTGGATTCA+CGG | - | chr8_3:12421278-12421297 | Msa1277220:intron | 30.0% | |
| ! | ACTAACTGCATTTGAAATCA+TGG | + | chr8_3:12421379-12421398 | None:intergenic | 30.0% |
| TGGTGAATTTGACATAATCA+GGG | + | chr8_3:12421588-12421607 | None:intergenic | 30.0% | |
| ATGGTGAATTTGACATAATC+AGG | + | chr8_3:12421589-12421608 | None:intergenic | 30.0% | |
| ! | TTTTCTTAGATCCTTCTTCA+GGG | + | chr8_3:12421816-12421835 | None:intergenic | 30.0% |
| ! | TTTTTCTTAGATCCTTCTTC+AGG | + | chr8_3:12421817-12421836 | None:intergenic | 30.0% |
| GAAGAAGGATCTAAGAAAAA+AGG | - | chr8_3:12421817-12421836 | Msa1277220:intron | 30.0% | |
| GAAACTTGACAAGAAAAGTA+AGG | - | chr8_3:12421897-12421916 | Msa1277220:intron | 30.0% | |
| ! | AAAGTTTCTGAGAAAAGACA+AGG | - | chr8_3:12421952-12421971 | Msa1277220:intron | 30.0% |
| ! | AAGCAAAAGAATCCATTTTC+TGG | - | chr8_3:12422021-12422040 | Msa1277220:intron | 30.0% |
| GTTATTAAAGGTCCAGAAAA+TGG | + | chr8_3:12422036-12422055 | None:intergenic | 30.0% | |
| CAAAATCATTCATCTCACTA+AGG | + | chr8_3:12422394-12422413 | None:intergenic | 30.0% | |
| ! | GAGATGAATGATTTTGTAAC+TGG | - | chr8_3:12422398-12422417 | Msa1277220:five_prime_UTR | 30.0% |
| TTTGTCGGTGGATATTATGT+AGG | - | chr8_3:12420595-12420614 | Msa1277220:three_prime_UTR | 35.0% | |
| AATCAAGATTCAACGAACGT+TGG | + | chr8_3:12420629-12420648 | None:intergenic | 35.0% | |
| ! | GAGGTTTGGAATTTACTATG+TGG | + | chr8_3:12420984-12421003 | None:intergenic | 35.0% |
| GCAGCAAATTAATACACATG+AGG | + | chr8_3:12421003-12421022 | None:intergenic | 35.0% | |
| TGTGTAGATGGATAATCCTT+AGG | - | chr8_3:12421075-12421094 | Msa1277220:intron | 35.0% | |
| ! | GAATTTCTTTTCTCCTCAAG+TGG | - | chr8_3:12421139-12421158 | Msa1277220:intron | 35.0% |
| CCATAGTCATCATAATGCAT+TGG | + | chr8_3:12421205-12421224 | None:intergenic | 35.0% | |
| CCAATGCATTATGATGACTA+TGG | - | chr8_3:12421202-12421221 | Msa1277220:intron | 35.0% | |
| AGTTTGAATAACGGTGAGTT+TGG | - | chr8_3:12421491-12421510 | Msa1277220:intron | 35.0% | |
| TTCGTGCATGTTTAGATTGA+TGG | + | chr8_3:12421608-12421627 | None:intergenic | 35.0% | |
| TGAGAAAGGGAAAGAAATCA+TGG | - | chr8_3:12421851-12421870 | Msa1277220:intron | 35.0% | |
| !! | TAAGTATTGGACCAGAAACA+TGG | + | chr8_3:12421978-12421997 | None:intergenic | 35.0% |
| CCTTTGTAGGAGTTAAGTAT+TGG | + | chr8_3:12421991-12422010 | None:intergenic | 35.0% | |
| CCAATACTTAACTCCTACAA+AGG | - | chr8_3:12421988-12422007 | Msa1277220:intron | 35.0% | |
| AACTCCTACAAAGGTTATGA+TGG | - | chr8_3:12421997-12422016 | Msa1277220:intron | 35.0% | |
| ACTCCTACAAAGGTTATGAT+GGG | - | chr8_3:12421998-12422017 | Msa1277220:intron | 35.0% | |
| TTCTCTTCTGATCTCTTTGT+TGG | + | chr8_3:12422072-12422091 | None:intergenic | 35.0% | |
| ! | TGTTGATGGAGAGTCATATA+AGG | + | chr8_3:12422102-12422121 | None:intergenic | 35.0% |
| ! | GATGAGGACTATTTTGTTGA+TGG | + | chr8_3:12422116-12422135 | None:intergenic | 35.0% |
| AAACTATGGTCCTCTTTATG+TGG | - | chr8_3:12422143-12422162 | Msa1277220:intron | 35.0% | |
| AGCTAAGTAACCACATAAAG+AGG | + | chr8_3:12422156-12422175 | None:intergenic | 35.0% | |
| GGTCACAATACTAGCATATT+TGG | - | chr8_3:12422236-12422255 | Msa1277220:intron | 35.0% | |
| TTTGTCGGTGGATATTATGT+AGG | - | chr8_3:12420595-12420614 | Msa1277220:three_prime_UTR | 35.0% | |
| AATCAAGATTCAACGAACGT+TGG | + | chr8_3:12420629-12420648 | None:intergenic | 35.0% | |
| ! | GAGGTTTGGAATTTACTATG+TGG | + | chr8_3:12420984-12421003 | None:intergenic | 35.0% |
| GCAGCAAATTAATACACATG+AGG | + | chr8_3:12421003-12421022 | None:intergenic | 35.0% | |
| TGTGTAGATGGATAATCCTT+AGG | - | chr8_3:12421075-12421094 | Msa1277220:intron | 35.0% | |
| ! | GAATTTCTTTTCTCCTCAAG+TGG | - | chr8_3:12421139-12421158 | Msa1277220:intron | 35.0% |
| CCATAGTCATCATAATGCAT+TGG | + | chr8_3:12421205-12421224 | None:intergenic | 35.0% | |
| CCAATGCATTATGATGACTA+TGG | - | chr8_3:12421202-12421221 | Msa1277220:intron | 35.0% | |
| AGTTTGAATAACGGTGAGTT+TGG | - | chr8_3:12421491-12421510 | Msa1277220:intron | 35.0% | |
| TTCGTGCATGTTTAGATTGA+TGG | + | chr8_3:12421608-12421627 | None:intergenic | 35.0% | |
| TGAGAAAGGGAAAGAAATCA+TGG | - | chr8_3:12421851-12421870 | Msa1277220:intron | 35.0% | |
| !! | TAAGTATTGGACCAGAAACA+TGG | + | chr8_3:12421978-12421997 | None:intergenic | 35.0% |
| CCTTTGTAGGAGTTAAGTAT+TGG | + | chr8_3:12421991-12422010 | None:intergenic | 35.0% | |
| CCAATACTTAACTCCTACAA+AGG | - | chr8_3:12421988-12422007 | Msa1277220:intron | 35.0% | |
| AACTCCTACAAAGGTTATGA+TGG | - | chr8_3:12421997-12422016 | Msa1277220:intron | 35.0% | |
| ACTCCTACAAAGGTTATGAT+GGG | - | chr8_3:12421998-12422017 | Msa1277220:intron | 35.0% | |
| TTCTCTTCTGATCTCTTTGT+TGG | + | chr8_3:12422072-12422091 | None:intergenic | 35.0% | |
| ! | TGTTGATGGAGAGTCATATA+AGG | + | chr8_3:12422102-12422121 | None:intergenic | 35.0% |
| ! | GATGAGGACTATTTTGTTGA+TGG | + | chr8_3:12422116-12422135 | None:intergenic | 35.0% |
| AAACTATGGTCCTCTTTATG+TGG | - | chr8_3:12422143-12422162 | Msa1277220:intron | 35.0% | |
| AGCTAAGTAACCACATAAAG+AGG | + | chr8_3:12422156-12422175 | None:intergenic | 35.0% | |
| GGTCACAATACTAGCATATT+TGG | - | chr8_3:12422236-12422255 | Msa1277220:intron | 35.0% | |
| ! | TTCTTTTTGCCAGTTCAGGT+TGG | - | chr8_3:12420504-12420523 | Msa1277220:three_prime_UTR | 40.0% |
| TTGAGTTCAACTCTAGCTGT+CGG | - | chr8_3:12420563-12420582 | Msa1277220:three_prime_UTR | 40.0% | |
| GAAATCAATGTCACATGGAG+AGG | + | chr8_3:12420926-12420945 | None:intergenic | 40.0% | |
| CTATGGATTTGATCTGCAAC+AGG | - | chr8_3:12421219-12421238 | Msa1277220:intron | 40.0% | |
| GCAAAATCACAATAACACCG+TGG | - | chr8_3:12421513-12421532 | Msa1277220:intron | 40.0% | |
| !!! | TTTTGGCTCTCACTAGTTTC+TGG | - | chr8_3:12421738-12421757 | Msa1277220:intron | 40.0% |
| TTTCCCTTTCTCACTTTCTC+TGG | + | chr8_3:12421844-12421863 | None:intergenic | 40.0% | |
| GAAATCATGGAAAAGTTCCC+TGG | - | chr8_3:12421864-12421883 | Msa1277220:intron | 40.0% | |
| AAGTTTCCACCATGAAACCA+GGG | + | chr8_3:12421884-12421903 | None:intergenic | 40.0% | |
| AAAAGACAAGGCCATGTTTC+TGG | - | chr8_3:12421964-12421983 | Msa1277220:intron | 40.0% | |
| CTTCCCATCATAACCTTTGT+AGG | + | chr8_3:12422004-12422023 | None:intergenic | 40.0% | |
| !!! | CCATAGTTTTGAACAGGATG+AGG | + | chr8_3:12422132-12422151 | None:intergenic | 40.0% |
| CCTCATCCTGTTCAAAACTA+TGG | - | chr8_3:12422129-12422148 | Msa1277220:intron | 40.0% | |
| !!! | AGAGGACCATAGTTTTGAAC+AGG | + | chr8_3:12422138-12422157 | None:intergenic | 40.0% |
| ! | CCAGTAGTATGTGCTATTGT+CGG | - | chr8_3:12422294-12422313 | Msa1277220:intron | 40.0% |
| ! | TTCTTTTTGCCAGTTCAGGT+TGG | - | chr8_3:12420504-12420523 | Msa1277220:three_prime_UTR | 40.0% |
| TTGAGTTCAACTCTAGCTGT+CGG | - | chr8_3:12420563-12420582 | Msa1277220:three_prime_UTR | 40.0% | |
| GAAATCAATGTCACATGGAG+AGG | + | chr8_3:12420926-12420945 | None:intergenic | 40.0% | |
| CTATGGATTTGATCTGCAAC+AGG | - | chr8_3:12421219-12421238 | Msa1277220:intron | 40.0% | |
| GCAAAATCACAATAACACCG+TGG | - | chr8_3:12421513-12421532 | Msa1277220:intron | 40.0% | |
| !!! | TTTTGGCTCTCACTAGTTTC+TGG | - | chr8_3:12421738-12421757 | Msa1277220:intron | 40.0% |
| TTTCCCTTTCTCACTTTCTC+TGG | + | chr8_3:12421844-12421863 | None:intergenic | 40.0% | |
| GAAATCATGGAAAAGTTCCC+TGG | - | chr8_3:12421864-12421883 | Msa1277220:intron | 40.0% | |
| AAGTTTCCACCATGAAACCA+GGG | + | chr8_3:12421884-12421903 | None:intergenic | 40.0% | |
| AAAAGACAAGGCCATGTTTC+TGG | - | chr8_3:12421964-12421983 | Msa1277220:intron | 40.0% | |
| CTTCCCATCATAACCTTTGT+AGG | + | chr8_3:12422004-12422023 | None:intergenic | 40.0% | |
| !!! | CCATAGTTTTGAACAGGATG+AGG | + | chr8_3:12422132-12422151 | None:intergenic | 40.0% |
| CCTCATCCTGTTCAAAACTA+TGG | - | chr8_3:12422129-12422148 | Msa1277220:intron | 40.0% | |
| !!! | AGAGGACCATAGTTTTGAAC+AGG | + | chr8_3:12422138-12422157 | None:intergenic | 40.0% |
| ! | CCAGTAGTATGTGCTATTGT+CGG | - | chr8_3:12422294-12422313 | Msa1277220:intron | 40.0% |
| AGAAATGCACCAACCTGAAC+TGG | + | chr8_3:12420516-12420535 | None:intergenic | 45.0% | |
| TGTCGGCATAGAGACTTTGT+CGG | - | chr8_3:12420580-12420599 | Msa1277220:three_prime_UTR | 45.0% | |
| ! | TTCTTTTCTCCTCAAGTGGC+TGG | - | chr8_3:12421143-12421162 | Msa1277220:intron | 45.0% |
| CAACAAAAACCAGCCACTTG+AGG | + | chr8_3:12421155-12421174 | None:intergenic | 45.0% | |
| !! | CTAGTTTCTGGCTGAAGCAA+AGG | - | chr8_3:12421750-12421769 | Msa1277220:intron | 45.0% |
| TCAACAGTGTACCCTGAAGA+AGG | - | chr8_3:12421802-12421821 | Msa1277220:intron | 45.0% | |
| AGGACCAGAGAAAGTGAGAA+AGG | - | chr8_3:12421837-12421856 | Msa1277220:intron | 45.0% | |
| GGACCAGAGAAAGTGAGAAA+GGG | - | chr8_3:12421838-12421857 | Msa1277220:intron | 45.0% | |
| GGAAAAGTTCCCTGGTTTCA+TGG | - | chr8_3:12421872-12421891 | Msa1277220:intron | 45.0% | |
| AAAGTTCCCTGGTTTCATGG+TGG | - | chr8_3:12421875-12421894 | Msa1277220:intron | 45.0% | |
| CAAGTTTCCACCATGAAACC+AGG | + | chr8_3:12421885-12421904 | None:intergenic | 45.0% | |
| CCGACAATAGCACATACTAC+TGG | + | chr8_3:12422297-12422316 | None:intergenic | 45.0% | |
| AGAAATGCACCAACCTGAAC+TGG | + | chr8_3:12420516-12420535 | None:intergenic | 45.0% | |
| TGTCGGCATAGAGACTTTGT+CGG | - | chr8_3:12420580-12420599 | Msa1277220:three_prime_UTR | 45.0% | |
| ! | TTCTTTTCTCCTCAAGTGGC+TGG | - | chr8_3:12421143-12421162 | Msa1277220:intron | 45.0% |
| CAACAAAAACCAGCCACTTG+AGG | + | chr8_3:12421155-12421174 | None:intergenic | 45.0% | |
| !! | CTAGTTTCTGGCTGAAGCAA+AGG | - | chr8_3:12421750-12421769 | Msa1277220:intron | 45.0% |
| TCAACAGTGTACCCTGAAGA+AGG | - | chr8_3:12421802-12421821 | Msa1277220:intron | 45.0% | |
| AGGACCAGAGAAAGTGAGAA+AGG | - | chr8_3:12421837-12421856 | Msa1277220:intron | 45.0% | |
| GGACCAGAGAAAGTGAGAAA+GGG | - | chr8_3:12421838-12421857 | Msa1277220:intron | 45.0% | |
| GGAAAAGTTCCCTGGTTTCA+TGG | - | chr8_3:12421872-12421891 | Msa1277220:intron | 45.0% | |
| AAAGTTCCCTGGTTTCATGG+TGG | - | chr8_3:12421875-12421894 | Msa1277220:intron | 45.0% | |
| CAAGTTTCCACCATGAAACC+AGG | + | chr8_3:12421885-12421904 | None:intergenic | 45.0% | |
| CCGACAATAGCACATACTAC+TGG | + | chr8_3:12422297-12422316 | None:intergenic | 45.0% | |
| ! | TCTGCAACAGGACTTTTCCC+TGG | - | chr8_3:12421231-12421250 | Msa1277220:intron | 50.0% |
| ! | GCATCGACACTTCAGATCGA+AGG | - | chr8_3:12422197-12422216 | Msa1277220:intron | 50.0% |
| !! | CTTCAGATCGAAGGTGTCAG+TGG | - | chr8_3:12422206-12422225 | Msa1277220:intron | 50.0% |
| !! | GAAGGTGTCAGTGGTAGACA+CGG | - | chr8_3:12422215-12422234 | Msa1277220:intron | 50.0% |
| ! | TCTGCAACAGGACTTTTCCC+TGG | - | chr8_3:12421231-12421250 | Msa1277220:intron | 50.0% |
| ! | GCATCGACACTTCAGATCGA+AGG | - | chr8_3:12422197-12422216 | Msa1277220:intron | 50.0% |
| !! | CTTCAGATCGAAGGTGTCAG+TGG | - | chr8_3:12422206-12422225 | Msa1277220:intron | 50.0% |
| !! | GAAGGTGTCAGTGGTAGACA+CGG | - | chr8_3:12422215-12422234 | Msa1277220:intron | 50.0% |
| CGGCATAGAGACTTTGTCGG+TGG | - | chr8_3:12420583-12420602 | Msa1277220:three_prime_UTR | 55.0% | |
| CTGGCTGAAGCAAAGGAGCA+TGG | - | chr8_3:12421757-12421776 | Msa1277220:intron | 55.0% | |
| CGGCATAGAGACTTTGTCGG+TGG | - | chr8_3:12420583-12420602 | Msa1277220:three_prime_UTR | 55.0% | |
| CTGGCTGAAGCAAAGGAGCA+TGG | - | chr8_3:12421757-12421776 | Msa1277220:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 12420328 | 12422490 | 12420328 | ID=Msa1277220;Name=Msa1277220 |
| chr8_3 | mRNA | 12420328 | 12422490 | 12420328 | ID=Msa1277220-mRNA-1;Parent=Msa1277220;Name=Msa1277220-mRNA-1;_AED=0.17;_eAED=0.17;_QI=208|1|1|1|0.5|0.33|3|317|164 |
| chr8_3 | exon | 12420328 | 12421064 | 12420328 | ID=Msa1277220-mRNA-1:exon:5061;Parent=Msa1277220-mRNA-1 |
| chr8_3 | exon | 12421566 | 12421736 | 12421566 | ID=Msa1277220-mRNA-1:exon:5060;Parent=Msa1277220-mRNA-1 |
| chr8_3 | exon | 12422379 | 12422490 | 12422379 | ID=Msa1277220-mRNA-1:exon:5059;Parent=Msa1277220-mRNA-1 |
| chr8_3 | five_prime_UTR | 12422379 | 12422490 | 12422379 | ID=Msa1277220-mRNA-1:five_prime_utr;Parent=Msa1277220-mRNA-1 |
| chr8_3 | five_prime_UTR | 12421641 | 12421736 | 12421641 | ID=Msa1277220-mRNA-1:five_prime_utr;Parent=Msa1277220-mRNA-1 |
| chr8_3 | CDS | 12421566 | 12421640 | 12421566 | ID=Msa1277220-mRNA-1:cds;Parent=Msa1277220-mRNA-1 |
| chr8_3 | CDS | 12420645 | 12421064 | 12420645 | ID=Msa1277220-mRNA-1:cds;Parent=Msa1277220-mRNA-1 |
| chr8_3 | three_prime_UTR | 12420328 | 12420644 | 12420328 | ID=Msa1277220-mRNA-1:three_prime_utr;Parent=Msa1277220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
