AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0045790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0045790 MtrunA17_Chr1g0213001 98.387 682 11 0 1 682 1 682 0.0 1368
Msa0045790 MtrunA17_Chr1g0182001 54.976 211 89 2 3 207 2 212 1.14e-67 229
Msa0045790 MtrunA17_Chr1g0182001 44.928 276 129 2 260 535 202 454 1.23e-60 210
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0045790 AT5G13560.1 60.058 686 253 7 3 676 2 678 0.0 780
Msa0045790 AT2G37370.3 50.585 684 316 7 3 681 2 668 0.0 608
Msa0045790 AT2G37370.2 50.585 684 316 7 3 681 2 668 0.0 608
Msa0045790 AT2G37370.1 50.585 684 316 7 3 681 2 668 0.0 608
Msa0045790 AT2G37370.4 54.135 532 238 3 3 534 2 527 0.0 528

Find 150 sgRNAs with CRISPR-Local

Find 828 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTATAGGCTTTGTCTTAC+TGG 0.137879 1_1:-77767483 Msa0045790:intron
TGAAGCGTGCAATGGAAATT+AGG 0.189154 1_1:+77770153 None:intergenic
CCCTTCTCCTGGAGATGTTT+GGG 0.212578 1_1:-77767717 Msa0045790:intron
CTTTATTATGATTCTGATAT+TGG 0.221062 1_1:-77768633 Msa0045790:CDS
AATGCGATCATGAAGGATTT+TGG 0.222308 1_1:+77769944 None:intergenic
CCTTGCTGTTGAAGATATTA+AGG 0.258689 1_1:-77769554 Msa0045790:CDS
TCCCTTCTCCTGGAGATGTT+TGG 0.263141 1_1:-77767718 Msa0045790:CDS
CAAAACGTGGATCAACTTTC+TGG 0.265233 1_1:-77760666 Msa0045790:CDS
AGGGTTTGTGGTTTCGAAAT+TGG 0.268624 1_1:+77770173 None:intergenic
GAATCCACAGAGACCTTCTT+TGG 0.276603 1_1:-77769530 Msa0045790:intron
GTTGTAGGTTAATACTTCTT+TGG 0.286653 1_1:-77760944 Msa0045790:intron
GATTTGAGTGAAGGTGATTT+TGG 0.288162 1_1:+77758395 None:intergenic
TCTTGAAGCTGAACTGAAAA+AGG 0.292038 1_1:-77762038 Msa0045790:intron
AGTAAGCAGCTTACAAGATT+TGG 0.297153 1_1:-77767436 Msa0045790:CDS
TTACAAATTCAGTGCTTTAC+AGG 0.300972 1_1:+77758019 None:intergenic
GCCAAGCTTGAATCTGAGTT+TGG 0.308709 1_1:-77758341 Msa0045790:CDS
CTCAACAGGGAAATATTTCC+AGG 0.314692 1_1:-77758902 Msa0045790:intron
TCACAACAAATGTTCCAATA+TGG 0.319869 1_1:+77759652 None:intergenic
TCTCATTACCTTGGCTTCAT+AGG 0.340227 1_1:+77759278 None:intergenic
GAGCCTTGTATTAACCATAT+TGG 0.343181 1_1:-77759666 Msa0045790:CDS
GAAGCGTGCAATGGAAATTA+GGG 0.359327 1_1:+77770154 None:intergenic
CTGAGAGAGTTCAGTTGCTT+AGG 0.366068 1_1:-77769657 Msa0045790:CDS
AGGGAAACCTCTTCCTCGTT+TGG 0.366803 1_1:+77767736 None:intergenic
GCTTGGCTAATTCAGCTTCA+TGG 0.372198 1_1:+77758357 None:intergenic
ATGCTGAAGCCTCTAGTCTT+AGG 0.373993 1_1:-77766229 Msa0045790:CDS
TCAACTTTCTGGAAGATACT+TGG 0.382032 1_1:-77760655 Msa0045790:CDS
ATCTTGTAAGCTGCTTACTA+TGG 0.382980 1_1:+77767440 None:intergenic
AAAACATCGCGAAAATTTAG+TGG 0.389484 1_1:+77768603 None:intergenic
AAATTTCTGTATTTGACTGC+TGG 0.391944 1_1:+77760627 None:intergenic
TGAGAATTTGTCGGGAGCTT+CGG 0.392252 1_1:-77769608 Msa0045790:CDS
AGTTGAGCATCTGAAGATAA+AGG 0.396507 1_1:-77760851 Msa0045790:intron
GATTGTTTGCTTCCTCAAAC+TGG 0.403188 1_1:+77760878 None:intergenic
CAACAGAGGAAATTAATGAT+TGG 0.407683 1_1:-77758295 Msa0045790:CDS
TCACCTTCTGCTTCAGTTGG+AGG 0.409354 1_1:-77758452 Msa0045790:CDS
CCTATAGGCTTTGTCTTACT+GGG 0.415841 1_1:-77767482 Msa0045790:intron
GCTAATATGCCATACGCTCC+TGG 0.421688 1_1:-77757884 Msa0045790:three_prime_UTR
GACCTCGACGGCTTTGTTGA+CGG 0.422835 1_1:+77770052 None:intergenic
CCTTCACCTTCTGCTTCAGT+TGG 0.429537 1_1:-77758455 Msa0045790:CDS
GCCTTCAGCAACGGCTTGAC+CGG 0.436205 1_1:+77769968 None:intergenic
AACAGAGGAAATTAATGATT+GGG 0.436246 1_1:-77758294 Msa0045790:CDS
TTTGCACAACGTGCCATCAC+TGG 0.440668 1_1:-77767040 Msa0045790:CDS
CAGCAATAATCCTTCCAGTC+TGG 0.447710 1_1:+77765256 None:intergenic
AAAGAGATTGAGAATTTGTC+GGG 0.449006 1_1:-77769616 Msa0045790:CDS
GGAAGAGGTTTCCCTTCTCC+TGG 0.453671 1_1:-77767728 Msa0045790:CDS
TCCTTACCAGTACTTCATCT+TGG 0.453824 1_1:+77767394 None:intergenic
GCAATGGAAATTAGGGTTTG+TGG 0.454213 1_1:+77770161 None:intergenic
CGGTTCCTTCCAGGAGCGTA+TGG 0.467496 1_1:+77757875 None:intergenic
GGGCTCTCTATTTCAAGAAC+TGG 0.470284 1_1:+77758527 None:intergenic
TACAGAAATTTATGAGAAGC+AGG 0.470345 1_1:-77760615 Msa0045790:CDS
GTGACTAAAGGTGGTGAAAC+TGG 0.471373 1_1:-77762879 Msa0045790:CDS
CTAAGCAACTGAACTCTCTC+AGG 0.473370 1_1:+77769658 None:intergenic
GCCGGTCAAGCCGTTGCTGA+AGG 0.474065 1_1:-77769969 Msa0045790:CDS
TCCTGAGGTTCATGCCCAAA+AGG 0.476205 1_1:-77765204 Msa0045790:intron
TGACAAGCTGAAGGTCTTAA+CGG 0.478018 1_1:-77764532 Msa0045790:CDS
TAGATAAATCTGTAAGCTAT+AGG 0.479813 1_1:-77758119 Msa0045790:three_prime_UTR
AAATTTATGAGAAGCAGGTC+AGG 0.484747 1_1:-77760610 Msa0045790:intron
TATTATGATTCTGATATTGG+AGG 0.487783 1_1:-77768630 Msa0045790:CDS
CAACTTTCTGGAAGATACTT+GGG 0.487980 1_1:-77760654 Msa0045790:CDS
TAAAGAGATTGAGAATTTGT+CGG 0.489122 1_1:-77769617 Msa0045790:CDS
CAGATACAGATAGATACTAT+AGG 0.490384 1_1:-77770208 Msa0045790:five_prime_UTR
TATTACCACTTTCAGTGTAG+TGG 0.493198 1_1:-77758949 Msa0045790:CDS
TCCAAACTCAGATTCAAGCT+TGG 0.493581 1_1:+77758340 None:intergenic
ACTCAAATCAGATCAGGTAT+TGG 0.495936 1_1:-77758381 Msa0045790:CDS
ACCTTCACTCAAATCAGATC+AGG 0.497789 1_1:-77758387 Msa0045790:CDS
TTAAAAGTTCGCGTGACTAA+AGG 0.500180 1_1:-77762891 Msa0045790:CDS
GAGTTCAGTTGCTTAGGAGA+TGG 0.504417 1_1:-77769651 Msa0045790:CDS
GGAAAGTTTCTAACCAAAGA+AGG 0.507071 1_1:+77769517 None:intergenic
AGGTGGTGAAACTGGTGAAA+AGG 0.507701 1_1:-77762871 Msa0045790:CDS
TGAAGCTCCAAACGAGGAAG+AGG 0.509005 1_1:-77767743 Msa0045790:CDS
TCTTCCTCAAGATTTCTCCT+TGG 0.509071 1_1:+77759309 None:intergenic
AAAAGCGTATTTCTGACAAC+AGG 0.513459 1_1:-77764479 Msa0045790:intron
GATTAGAATTTGTTCCAGAC+TGG 0.514478 1_1:-77765270 Msa0045790:CDS
TGCACAGACAGTCAAAAGAT+TGG 0.515781 1_1:-77769707 Msa0045790:CDS
AAGCTACCAAGATGAAGTAC+TGG 0.518951 1_1:-77767400 Msa0045790:intron
TTGTCGGGAGCTTCGGCTGA+AGG 0.519241 1_1:-77769601 Msa0045790:CDS
GGAGGGTATAACACTATCAA+TGG 0.520798 1_1:-77768562 Msa0045790:intron
TAAATCTGTAAGCTATAGGT+TGG 0.523719 1_1:-77758115 Msa0045790:three_prime_UTR
TTTAATCTTTACAGATGCAA+AGG 0.525372 1_1:+77758062 None:intergenic
ACCTCTGAGTCAAATTCTTG+AGG 0.526194 1_1:+77759628 None:intergenic
CTGCTGCTCAAGCACGATTG+TGG 0.526248 1_1:-77760921 Msa0045790:CDS
GGAAGAGAGAGACCAGTTTG+AGG 0.527497 1_1:-77760890 Msa0045790:CDS
CAGTGAGATAACAACTTCAC+AGG 0.527733 1_1:-77766198 Msa0045790:CDS
TCAGCTTCTTACTACTTACC+AGG 0.534463 1_1:-77759814 Msa0045790:intron
GTTATCCACTACACTGAAAG+TGG 0.538687 1_1:+77758944 None:intergenic
AGAATTTGTTCCAGACTGGA+AGG 0.543034 1_1:-77765266 Msa0045790:CDS
AGACTCACCCAAACATCTCC+AGG 0.544973 1_1:+77767710 None:intergenic
ATGTTTCAGTCTTCACAGGT+GGG 0.545766 1_1:+77758507 None:intergenic
TTGCACAACGTGCCATCACT+GGG 0.552720 1_1:-77767039 Msa0045790:CDS
TGAATCCTCAGTATCTGCAC+TGG 0.552752 1_1:+77759344 None:intergenic
GGTAATGTTTCAGTCTTCAC+AGG 0.553096 1_1:+77758503 None:intergenic
AATTTACAATGCGATCATGA+AGG 0.555854 1_1:+77769937 None:intergenic
CCCAAACATCTCCAGGAGAA+GGG 0.556829 1_1:+77767717 None:intergenic
GTAAGTAGTAAGAAGCTGAA+TGG 0.557069 1_1:+77759818 None:intergenic
ATGAAGCTTGCAAGATCAGA+CGG 0.557630 1_1:-77758086 Msa0045790:three_prime_UTR
GGTTTCGAAATTGGAATGCA+CGG 0.559817 1_1:+77770182 None:intergenic
CAGGCTTTAAAAGTTGCACT+CGG 0.560691 1_1:-77765296 Msa0045790:CDS
GCTTGAATCTGAGTTTGGAA+AGG 0.561070 1_1:-77758336 Msa0045790:CDS
ACCCAAACATCTCCAGGAGA+AGG 0.564495 1_1:+77767716 None:intergenic
GTCAACAAAGCCGTCGAGGT+CGG 0.568463 1_1:-77770050 Msa0045790:CDS
TCTTCAAAGTCAGGCACTGG+AGG 0.570285 1_1:-77768580 Msa0045790:CDS
ATTCACAAGTATTAAGTCCA+AGG 0.573750 1_1:-77759326 Msa0045790:CDS
TACAAATTCAGTGCTTTACA+GGG 0.575777 1_1:+77758020 None:intergenic
AGCACGATTGTGGAACGTGA+GGG 0.577368 1_1:-77760911 Msa0045790:CDS
AATGTTTCAGTCTTCACAGG+TGG 0.579834 1_1:+77758506 None:intergenic
CTTCAAAGTCAGGCACTGGA+GGG 0.580760 1_1:-77768579 Msa0045790:CDS
TAAATAGGTTGACAAGCTGA+AGG 0.582137 1_1:-77764541 Msa0045790:intron
GGCTTGTTGAACGACGGTGT+CGG 0.584473 1_1:+77769989 None:intergenic
GGAAACAGAAGCAACCCTAC+AGG 0.586700 1_1:-77766141 Msa0045790:intron
GAGAGAAATGAAGCGTGCAA+TGG 0.590318 1_1:+77770145 None:intergenic
GTTCTTGTTGCCGACCTCGA+CGG 0.591608 1_1:+77770040 None:intergenic
TGTCTCTGTCTTTGAAAACT+CGG 0.592272 1_1:+77758427 None:intergenic
GAGCTTCTTCCTAAGACTAG+AGG 0.596775 1_1:+77766220 None:intergenic
TACAACAGAACACACCTGTA+GGG 0.597918 1_1:+77766127 None:intergenic
AAATCAATTCTGATCTCGCA+AGG 0.602182 1_1:-77767012 Msa0045790:intron
AAAGTTCGCGTGACTAAAGG+TGG 0.602456 1_1:-77762888 Msa0045790:CDS
GGATCTTAGCCACGATGACA+TGG 0.603066 1_1:+77770076 None:intergenic
AAGTCCAAGGAGAAATCTTG+AGG 0.609204 1_1:-77759313 Msa0045790:CDS
CCTTAATATCTTCAACAGCA+AGG 0.610486 1_1:+77769554 None:intergenic
GTTCCAATATGGTTAATACA+AGG 0.611572 1_1:+77759663 None:intergenic
CGCCGTCAACAAAGCCGTCG+AGG 0.612660 1_1:-77770054 Msa0045790:CDS
AGAGGATGAAGACGTCGATG+AGG 0.614864 1_1:+77770269 None:intergenic
ACCTGATCTGATTTGAGTGA+AGG 0.615572 1_1:+77758386 None:intergenic
TGAAGCTTGCAAGATCAGAC+GGG 0.616829 1_1:-77758085 Msa0045790:three_prime_UTR
ATATTTGACCTATGAAGCCA+AGG 0.617510 1_1:-77759286 Msa0045790:intron
GTACCTCCAACTGAAGCAGA+AGG 0.621842 1_1:+77758449 None:intergenic
ACCTCAAGAATTTGACTCAG+AGG 0.624174 1_1:-77759629 Msa0045790:intron
GACACCGTCGTTCAACAAGC+CGG 0.625021 1_1:-77769987 Msa0045790:CDS
AATTGATTATAAAGCTGCTG+AGG 0.625723 1_1:-77766162 Msa0045790:CDS
AAGCACGATTGTGGAACGTG+AGG 0.636747 1_1:-77760912 Msa0045790:CDS
CCAACTGAAGCAGAAGGTGA+AGG 0.636940 1_1:+77758455 None:intergenic
ATGATTTGTAATGATTAGCA+TGG 0.637047 1_1:-77757976 Msa0045790:three_prime_UTR
TGAAACTGGTGAAAAGGAGA+AGG 0.639219 1_1:-77762865 Msa0045790:intron
ATATGCCATACGCTCCTGGA+AGG 0.639949 1_1:-77757880 Msa0045790:three_prime_UTR
GACAACCAGTGCAGATACTG+AGG 0.645584 1_1:-77759349 Msa0045790:CDS
TTGACCGGCTTGTTGAACGA+CGG 0.661518 1_1:+77769983 None:intergenic
CTAACCAAAGAAGGTCTCTG+TGG 0.664488 1_1:+77769526 None:intergenic
AGTGAGATAACAACTTCACA+GGG 0.666818 1_1:-77766197 Msa0045790:CDS
ATGACATGGTTTCGATACAG+AGG 0.668452 1_1:+77770090 None:intergenic
TGTTTGTCTACAGAAAGAGT+TGG 0.668783 1_1:-77759688 Msa0045790:intron
GATTATTGAAGCTCCAAACG+AGG 0.672469 1_1:-77767749 Msa0045790:CDS
CTCGACGGCTTTGTTGACGG+CGG 0.681932 1_1:+77770055 None:intergenic
TGTTCTTTAGGTGAAGCGAG+AGG 0.683211 1_1:-77767074 Msa0045790:intron
TACTCAAGATTACTCAACAG+AGG 0.683783 1_1:-77758309 Msa0045790:CDS
AAGCAATGGAGACTCTCCTG+AGG 0.710271 1_1:-77765219 Msa0045790:CDS
AATCAGATGTCATCAAAACG+TGG 0.712961 1_1:-77760679 Msa0045790:CDS
TGAGATAACAACTTCACAGG+GGG 0.718246 1_1:-77766195 Msa0045790:CDS
GTATCGAAACCATGTCATCG+TGG 0.720695 1_1:-77770085 Msa0045790:exon
TGATGAATTGGAGAGACACG+AGG 0.721987 1_1:-77759859 Msa0045790:CDS
GAAGCTGCTATCTCGCATCG+AGG 0.750129 1_1:-77769682 Msa0045790:CDS
GTGAGATAACAACTTCACAG+GGG 0.793162 1_1:-77766196 Msa0045790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTAAAAAAATAAAAA+GGG + chr1_1:77769946-77769965 None:intergenic 0.0%
!! TTAATATTAAAAAAATAAAA+AGG + chr1_1:77769947-77769966 None:intergenic 0.0%
!! GTTATATAAATTAAATATAG+AGG - chr1_1:77758937-77758956 Msa0045790:CDS 10.0%
!! AATATAATAATATATGTGAT+TGG - chr1_1:77762095-77762114 Msa0045790:intron 10.0%
!! ATATTATCATGTTTATAAAT+AGG - chr1_1:77763589-77763608 Msa0045790:intron 10.0%
!!! GTTATCTTAATTAATTTTTA+GGG - chr1_1:77763738-77763757 Msa0045790:intron 10.0%
!!! AATTAAGTTTTATTTAAAAC+TGG - chr1_1:77764041-77764060 Msa0045790:intron 10.0%
!!! ATTAAGTTTTATTTAAAACT+GGG - chr1_1:77764042-77764061 Msa0045790:intron 10.0%
!! TTATATCATTTATATAGTAA+AGG - chr1_1:77764441-77764460 Msa0045790:intron 10.0%
!!! TTTTTTAAAATAAAAAAGTG+AGG - chr1_1:77765056-77765075 Msa0045790:intron 10.0%
!!! TAAGTTTTTAAATTTCAAAT+AGG + chr1_1:77766380-77766399 None:intergenic 10.0%
!!! AATACTTTTAAATTAAAAGA+AGG + chr1_1:77766551-77766570 None:intergenic 10.0%
!! AAATAATTGATGTATATAAT+AGG - chr1_1:77767738-77767757 Msa0045790:CDS 10.0%
!! AAAGAAAATGTTAAAAAATG+AGG - chr1_1:77757817-77757836 Msa0045790:three_prime_UTR 15.0%
!!! ACATTAGTTTAATTTAATTC+TGG - chr1_1:77758283-77758302 Msa0045790:CDS 15.0%
!!! CTTGTTTTTTCATTTTTTTT+TGG - chr1_1:77758841-77758860 Msa0045790:intron 15.0%
!! ACTATCAAGAAATTTATAAA+GGG + chr1_1:77759117-77759136 None:intergenic 15.0%
!! TACTATCAAGAAATTTATAA+AGG + chr1_1:77759118-77759137 None:intergenic 15.0%
!! AAATGGTATTTGTATTAAAT+TGG - chr1_1:77760200-77760219 Msa0045790:intron 15.0%
!!! TAGTATTATACATTTTTCAA+CGG - chr1_1:77760460-77760479 Msa0045790:intron 15.0%
!! ATTTACTGCTTAATAAATAT+CGG + chr1_1:77760801-77760820 None:intergenic 15.0%
!!! TTCTCATTTTTAGATTATAT+TGG + chr1_1:77761838-77761857 None:intergenic 15.0%
!!! ATCTTAGTAAAATTTTGTTT+TGG - chr1_1:77762521-77762540 Msa0045790:intron 15.0%
!!! TTTTGCAATTAAATTCATAA+TGG + chr1_1:77762662-77762681 None:intergenic 15.0%
!! AAGAAAAAAAATATAAGCAA+TGG - chr1_1:77762912-77762931 Msa0045790:CDS 15.0%
!!! AAAAAAAAATTGTACCTTTT+GGG + chr1_1:77762958-77762977 None:intergenic 15.0%
!!! AAAAAAAAAATTGTACCTTT+TGG + chr1_1:77762959-77762978 None:intergenic 15.0%
!! AAACTAAAACATAATGAAAA+GGG - chr1_1:77763144-77763163 Msa0045790:intron 15.0%
!!! TTATTTCATTTTTGGTTATT+TGG - chr1_1:77763466-77763485 Msa0045790:intron 15.0%
!!! ATGTTAAACTATGAAATTTT+TGG - chr1_1:77763691-77763710 Msa0045790:intron 15.0%
!!! GGTTATCTTAATTAATTTTT+AGG - chr1_1:77763737-77763756 Msa0045790:intron 15.0%
!! TTTAATCCTTTCATTATTAA+TGG - chr1_1:77764300-77764319 Msa0045790:intron 15.0%
!!! AAGATTTCAATAATTTTGTT+TGG + chr1_1:77764732-77764751 None:intergenic 15.0%
!!! ATTTTCCTTAATTTAATCAA+CGG - chr1_1:77765704-77765723 Msa0045790:intron 15.0%
!! AAACTTAAAAAACTTCAAAT+AGG - chr1_1:77766393-77766412 Msa0045790:intron 15.0%
!! TGAAACTTAAAAAAACTTAA+AGG - chr1_1:77766447-77766466 Msa0045790:intron 15.0%
!!! TTTGAAATTATCTTTTTTCT+TGG - chr1_1:77767317-77767336 Msa0045790:intron 15.0%
!! TTTATTAGATACACAAAATT+AGG - chr1_1:77767638-77767657 Msa0045790:intron 15.0%
!! TTACTAGTATTTATTACATT+AGG - chr1_1:77767662-77767681 Msa0045790:intron 15.0%
!!! GTTTTATCATAAACAATATT+TGG - chr1_1:77768076-77768095 Msa0045790:intron 15.0%
!! ATAATTATATTCGATATTTC+CGG + chr1_1:77768202-77768221 None:intergenic 15.0%
!! TGTAAAAAAATAAAGAACAA+TGG + chr1_1:77768229-77768248 None:intergenic 15.0%
!!! GTATTTTTGTACTAATATTT+TGG - chr1_1:77769069-77769088 Msa0045790:intron 15.0%
!! CCTAAAATTGCAATAAAATT+AGG + chr1_1:77758241-77758260 None:intergenic 20.0%
!!! CCTAATTTTATTGCAATTTT+AGG - chr1_1:77758238-77758257 Msa0045790:exon 20.0%
!! TTGCTTAAATTAGGATAATT+AGG + chr1_1:77758264-77758283 None:intergenic 20.0%
!!! AAACTAATGTTGCTTAAATT+AGG + chr1_1:77758273-77758292 None:intergenic 20.0%
!! TCAAAATTCAAAACACTAAA+TGG + chr1_1:77758340-77758359 None:intergenic 20.0%
!! ACACAGAGAAAAAATTAATT+GGG + chr1_1:77758907-77758926 None:intergenic 20.0%
!! TAATTTATATAACACAACAC+AGG + chr1_1:77758930-77758949 None:intergenic 20.0%
!!! TATAAAGGGTCTTATATTTA+TGG + chr1_1:77759103-77759122 None:intergenic 20.0%
!! TTTCATATTCCAAAACAAAT+TGG + chr1_1:77759191-77759210 None:intergenic 20.0%
!! CTTTATTATGATTCTGATAT+TGG - chr1_1:77759512-77759531 Msa0045790:intron 20.0%
!! AATTAGCATCTAATATTCAT+AGG - chr1_1:77760085-77760104 Msa0045790:intron 20.0%
!!! TTTTGTTAATATTCCACAAA+TGG - chr1_1:77760183-77760202 Msa0045790:intron 20.0%
!! TTTAATACAAATACCATTTG+TGG + chr1_1:77760199-77760218 None:intergenic 20.0%
!! TGTACATCAAAGAAAAATAA+AGG + chr1_1:77760241-77760260 None:intergenic 20.0%
!!! TTTGTTATAATTGCTGATAA+TGG - chr1_1:77760337-77760356 Msa0045790:intron 20.0%
!! AAGGTTATATTAAAATGGTT+TGG + chr1_1:77760640-77760659 None:intergenic 20.0%
!! GGAATAAGGTTATATTAAAA+TGG + chr1_1:77760645-77760664 None:intergenic 20.0%
!! TAATATAACCTTATTCCTAT+AGG - chr1_1:77760648-77760667 Msa0045790:CDS 20.0%
!!! ACTAATTATGATATTTTCCT+GGG + chr1_1:77761618-77761637 None:intergenic 20.0%
!!! TACTAATTATGATATTTTCC+TGG + chr1_1:77761619-77761638 None:intergenic 20.0%
!!! TTAGATTATATTGGTAATCA+TGG + chr1_1:77761829-77761848 None:intergenic 20.0%
!! TTCATTACTGACAAAATAAA+GGG + chr1_1:77762059-77762078 None:intergenic 20.0%
!! ATTCATTACTGACAAAATAA+AGG + chr1_1:77762060-77762079 None:intergenic 20.0%
!! TGTGATTGGATAATAATATT+TGG - chr1_1:77762109-77762128 Msa0045790:intron 20.0%
!! GTGATTGGATAATAATATTT+GGG - chr1_1:77762110-77762129 Msa0045790:intron 20.0%
!! AAACACTTTCTTTAACTAAA+GGG + chr1_1:77762230-77762249 None:intergenic 20.0%
!! TAAACACTTTCTTTAACTAA+AGG + chr1_1:77762231-77762250 None:intergenic 20.0%
!! AATTAATGATCAAAACTCTA+AGG + chr1_1:77762556-77762575 None:intergenic 20.0%
!! ACAAAATAATTTGAGCAAAA+AGG + chr1_1:77762599-77762618 None:intergenic 20.0%
!! TTGTATGAAAACCTAAATAT+AGG - chr1_1:77763047-77763066 Msa0045790:intron 20.0%
!! AAAATTGAATCTCTCAAAAA+TGG - chr1_1:77763121-77763140 Msa0045790:intron 20.0%
!! GAAACTAAAACATAATGAAA+AGG - chr1_1:77763143-77763162 Msa0045790:intron 20.0%
!! AACTAAAACATAATGAAAAG+GGG - chr1_1:77763145-77763164 Msa0045790:intron 20.0%
!! GTAATTGTGAAAGTTATAAA+TGG + chr1_1:77763177-77763196 None:intergenic 20.0%
!! GGATGAAAATTATAAAATAC+TGG + chr1_1:77763292-77763311 None:intergenic 20.0%
!!! AATCATTGTATTTTGCTTTT+TGG - chr1_1:77763981-77764000 Msa0045790:intron 20.0%
!! TGATATAACCTGTTATATAT+AGG + chr1_1:77764429-77764448 None:intergenic 20.0%
!! AAGGAGAAAATTACAAATTT+AGG + chr1_1:77765596-77765615 None:intergenic 20.0%
!!! AAATTTGTAATTTTCTCCTT+TGG - chr1_1:77765596-77765615 Msa0045790:intron 20.0%
!! AAAATTTGAACCAATTGAAA+GGG + chr1_1:77765930-77765949 None:intergenic 20.0%
!!! TTTCAATTGGTTCAAATTTT+CGG - chr1_1:77765930-77765949 Msa0045790:intron 20.0%
!! AGAAGAAAACAAAAATCAAT+TGG + chr1_1:77766027-77766046 None:intergenic 20.0%
!!! CTAAACATGTTATTCTTTTA+AGG - chr1_1:77766276-77766295 Msa0045790:intron 20.0%
!!! TATATTTTTGTCAGACTTAA+AGG + chr1_1:77766320-77766339 None:intergenic 20.0%
!!! ACGTTTTTTAAGTTTCAAAT+AGG + chr1_1:77766474-77766493 None:intergenic 20.0%
!! ATATAAAGAGAAAAAAGCAA+TGG + chr1_1:77766617-77766636 None:intergenic 20.0%
!! TACAACTCAAATTTAAACTT+TGG + chr1_1:77767187-77767206 None:intergenic 20.0%
!!! AAAGTTTAAATTTGAGTTGT+AGG - chr1_1:77767186-77767205 Msa0045790:intron 20.0%
!! TCAAATCAAAATATCAAACT+GGG + chr1_1:77767393-77767412 None:intergenic 20.0%
!! TTGATGTATATAATAGGAAA+AGG - chr1_1:77767744-77767763 Msa0045790:CDS 20.0%
!! TTATTAAATCTTGTCTTACA+TGG - chr1_1:77768549-77768568 Msa0045790:intron 20.0%
!! TATTAAATCTTGTCTTACAT+GGG - chr1_1:77768550-77768569 Msa0045790:intron 20.0%
!!! TATTTCCTTAATTTTTCTTG+AGG - chr1_1:77768758-77768777 Msa0045790:intron 20.0%
!!! TTTTAAACTAAGCATTAGTT+TGG - chr1_1:77770199-77770218 Msa0045790:five_prime_UTR 20.0%
!!! ATTTTTATCAAATAAGAGTG+GGG + chr1_1:77770328-77770347 None:intergenic 20.0%
!!! CATTTTTATCAAATAAGAGT+GGG + chr1_1:77770329-77770348 None:intergenic 20.0%
!!! TCATTTTTATCAAATAAGAG+TGG + chr1_1:77770330-77770349 None:intergenic 20.0%
! TTGCAATAAAATTAGGAATG+CGG + chr1_1:77758234-77758253 None:intergenic 25.0%
! TAAAGAGATTGAGAATTTGT+CGG - chr1_1:77758528-77758547 Msa0045790:CDS 25.0%
!!! TGGTATAATGTACTGATTTT+AGG - chr1_1:77758677-77758696 Msa0045790:intron 25.0%
!!! GGTATAATGTACTGATTTTA+GGG - chr1_1:77758678-77758697 Msa0045790:intron 25.0%
! CTGTATTGAATTTATTATCC+CGG - chr1_1:77758752-77758771 Msa0045790:intron 25.0%
! TAATCTCCAGAATTAAAAAC+CGG + chr1_1:77758774-77758793 None:intergenic 25.0%
!! TTTGGTGATAACTGAATTAT+CGG - chr1_1:77758859-77758878 Msa0045790:intron 25.0%
! GACACAGAGAAAAAATTAAT+TGG + chr1_1:77758908-77758927 None:intergenic 25.0%
! AGTGAGAGTAATATATCAAT+GGG + chr1_1:77759042-77759061 None:intergenic 25.0%
! GTATAACTAAGAGACATATT+TGG + chr1_1:77759166-77759185 None:intergenic 25.0%
!!! GTTATACTACCAATTTGTTT+TGG - chr1_1:77759179-77759198 Msa0045790:intron 25.0%
! TCTCACATATTAAGAAAAAG+TGG + chr1_1:77759277-77759296 None:intergenic 25.0%
!!! TACCAATGGGTTATATAAAT+AGG - chr1_1:77759301-77759320 Msa0045790:CDS 25.0%
!!! ACCAATGGGTTATATAAATA+GGG - chr1_1:77759302-77759321 Msa0045790:CDS 25.0%
! AACAAACAGCTAATATAAGA+TGG + chr1_1:77759463-77759482 None:intergenic 25.0%
!!! GTTTGTTTTCATTATTCTAC+TGG - chr1_1:77759476-77759495 Msa0045790:intron 25.0%
! TATTATGATTCTGATATTGG+AGG - chr1_1:77759515-77759534 Msa0045790:intron 25.0%
! TGCACAGAATAAATCATAAT+TGG + chr1_1:77759680-77759699 None:intergenic 25.0%
!! ACCTTCATGTAATCATTTTA+TGG - chr1_1:77760269-77760288 Msa0045790:intron 25.0%
! ACCATAAAATGATTACATGA+AGG + chr1_1:77760273-77760292 None:intergenic 25.0%
!! ACATGTATGTGATATTTTAC+TGG - chr1_1:77760507-77760526 Msa0045790:intron 25.0%
! TATATAAGTGTATTCGTCAT+TGG - chr1_1:77760551-77760570 Msa0045790:intron 25.0%
! CTATGAATTCATGAAATACT+TGG - chr1_1:77760874-77760893 Msa0045790:CDS 25.0%
! AAATTCACAAGATAAACTCA+AGG + chr1_1:77760972-77760991 None:intergenic 25.0%
! ATATGTTTACCTTGTTCTTT+AGG - chr1_1:77761059-77761078 Msa0045790:intron 25.0%
!!! CTAAGTTTTATGGTTTTATC+CGG - chr1_1:77761215-77761234 Msa0045790:intron 25.0%
! ACTCATTTAAATAACATGTG+TGG - chr1_1:77761341-77761360 Msa0045790:intron 25.0%
!! AAGAAAGAGCATAAATAAAC+AGG + chr1_1:77762187-77762206 None:intergenic 25.0%
! GTTCTTAAAACCCTAAAAAT+AGG - chr1_1:77762262-77762281 Msa0045790:intron 25.0%
!! TTTTCGACCTATTTTCTTTA+AGG - chr1_1:77762377-77762396 Msa0045790:intron 25.0%
! TTGATAAATGTCAGAATGTT+GGG + chr1_1:77762489-77762508 None:intergenic 25.0%
! TTTGATAAATGTCAGAATGT+TGG + chr1_1:77762490-77762509 None:intergenic 25.0%
!!! AACTTTTAAAGCCTGTAAAA+TGG + chr1_1:77762844-77762863 None:intergenic 25.0%
!!! TTTTTTTTTTCTCTCTCTGT+AGG - chr1_1:77762969-77762988 Msa0045790:intron 25.0%
! ATGAAAACCTAAATATAGGA+AGG - chr1_1:77763051-77763070 Msa0045790:intron 25.0%
!!! ACTGACAACTTTTTTTGAAA+GGG + chr1_1:77763223-77763242 None:intergenic 25.0%
!!! AACTGACAACTTTTTTTGAA+AGG + chr1_1:77763224-77763243 None:intergenic 25.0%
! AAAAAAGTTGTCAGTTGTAA+TGG - chr1_1:77763228-77763247 Msa0045790:intron 25.0%
! TTAGTTGAGATATCTACTAA+CGG + chr1_1:77763407-77763426 None:intergenic 25.0%
!!! AATGGTGGTTATTTCATTTT+TGG - chr1_1:77763458-77763477 Msa0045790:intron 25.0%
!! ATAGTGTTCTCTCTTAATTT+TGG - chr1_1:77763716-77763735 Msa0045790:intron 25.0%
!!! GGCTCTAAAATAGAAATAAT+TGG - chr1_1:77763795-77763814 Msa0045790:intron 25.0%
! GTCTCTTGACTATAAAAATT+AGG + chr1_1:77763949-77763968 None:intergenic 25.0%
! TACAATGATTTCAACGAATA+TGG + chr1_1:77763971-77763990 None:intergenic 25.0%
! TATGTATATAAGAACCTACA+CGG + chr1_1:77764229-77764248 None:intergenic 25.0%
! ACAAGAGGTAATTTAGTTAT+TGG + chr1_1:77764263-77764282 None:intergenic 25.0%
! ACTCTTCCATTAATAATGAA+AGG + chr1_1:77764309-77764328 None:intergenic 25.0%
! ATTGAATAGAGACGAAAATA+TGG + chr1_1:77764609-77764628 None:intergenic 25.0%
!!! GCATTTAGGAACTTTAAAAT+TGG + chr1_1:77764634-77764653 None:intergenic 25.0%
! AATCTCAGTTATTTGCATTT+AGG + chr1_1:77764648-77764667 None:intergenic 25.0%
!!! TAATTTTGTTTGGAGTTGAT+AGG + chr1_1:77764722-77764741 None:intergenic 25.0%
! CATCAAAATGGAAAAATTAC+TGG + chr1_1:77764842-77764861 None:intergenic 25.0%
!! CAGTAATTTTTCCATTTTGA+TGG - chr1_1:77764840-77764859 Msa0045790:intron 25.0%
!!! TAATTTTTCCATTTTGATGG+AGG - chr1_1:77764843-77764862 Msa0045790:intron 25.0%
! AAAAATTAATTGACCATCTG+TGG - chr1_1:77764963-77764982 Msa0045790:intron 25.0%
!! AAATGAGGGTTTAATTTAAG+AGG - chr1_1:77765509-77765528 Msa0045790:intron 25.0%
! GTTATGTTATACCATATGAA+TGG - chr1_1:77765535-77765554 Msa0045790:intron 25.0%
!! ATTCTCCGTTGATTAAATTA+AGG + chr1_1:77765712-77765731 None:intergenic 25.0%
! TTTGGGAAAAAACTATATCA+CGG + chr1_1:77765798-77765817 None:intergenic 25.0%
! GAAAATTTGAACCAATTGAA+AGG + chr1_1:77765931-77765950 None:intergenic 25.0%
!!! TTCAATTGGTTCAAATTTTC+GGG - chr1_1:77765931-77765950 Msa0045790:intron 25.0%
!!! CAAGATTATCTTTTTTCTGT+TGG + chr1_1:77766092-77766111 None:intergenic 25.0%
! CAGTTTCTTCATAAAGAAAA+TGG + chr1_1:77766139-77766158 None:intergenic 25.0%
!! ATTACAGATTCTACAGATTT+TGG - chr1_1:77766188-77766207 Msa0045790:CDS 25.0%
! TTTCAAATAGGTCCTTAAAA+GGG + chr1_1:77766368-77766387 None:intergenic 25.0%
! ATTTCAAATAGGTCCTTAAA+AGG + chr1_1:77766369-77766388 None:intergenic 25.0%
! GCATCAAATTAACAACTTAA+AGG - chr1_1:77766417-77766436 Msa0045790:intron 25.0%
! AAAAACGTAAAAGACTAACT+CGG - chr1_1:77766486-77766505 Msa0045790:intron 25.0%
!!! GGTATTTTTGTCAAACTTAA+AGG - chr1_1:77766507-77766526 Msa0045790:intron 25.0%
!! AGAAGGCTAAATACTTATTT+TGG + chr1_1:77766534-77766553 None:intergenic 25.0%
! AAGTTATTACACACAGATTA+AGG - chr1_1:77766722-77766741 Msa0045790:intron 25.0%
! AAATTAACCCTATCAACTAT+TGG - chr1_1:77766783-77766802 Msa0045790:intron 25.0%
! AGTGTACTAGTAATAATTAG+AGG - chr1_1:77766856-77766875 Msa0045790:intron 25.0%
! GTGTACTAGTAATAATTAGA+GGG - chr1_1:77766857-77766876 Msa0045790:intron 25.0%
! AAGTGGTTAAATATTGTGAT+TGG + chr1_1:77767127-77767146 None:intergenic 25.0%
! AAACTTTAACTCATGAAAAG+TGG + chr1_1:77767144-77767163 None:intergenic 25.0%
!!! GAAATTATCTTTTTTCTTGG+CGG - chr1_1:77767320-77767339 Msa0045790:intron 25.0%
! GTCAAATCAAAATATCAAAC+TGG + chr1_1:77767394-77767413 None:intergenic 25.0%
! AATAATACTGAGTATATAGG+AGG + chr1_1:77767915-77767934 None:intergenic 25.0%
! GTGAATAATACTGAGTATAT+AGG + chr1_1:77767918-77767937 None:intergenic 25.0%
!!! TTTTTTGTGAAGTGATGAAT+TGG - chr1_1:77768274-77768293 Msa0045790:intron 25.0%
! CACATAGGAAGAAAAAAAAA+CGG + chr1_1:77768422-77768441 None:intergenic 25.0%
!! AAAGTGCAATTTTTCCATTA+GGG + chr1_1:77768950-77768969 None:intergenic 25.0%
!!! AAAAGTGCAATTTTTCCATT+AGG + chr1_1:77768951-77768970 None:intergenic 25.0%
! GAAAAAAAAAGAACAAATCC+AGG + chr1_1:77768976-77768995 None:intergenic 25.0%
!! TAATCTGAAACAAGAAAACA+TGG + chr1_1:77769178-77769197 None:intergenic 25.0%
! AAGAAAGAAAATACAAAACC+TGG + chr1_1:77769264-77769283 None:intergenic 25.0%
! TTCTTTCTTACTAACTATGT+CGG - chr1_1:77769275-77769294 Msa0045790:intron 25.0%
!!! TGGTTTTAACAGGTATTATT+AGG + chr1_1:77769397-77769416 None:intergenic 25.0%
! ATATTGTAGATTAAGAGAGA+CGG + chr1_1:77769488-77769507 None:intergenic 25.0%
!!! TTTCCATTTAACTTGCTTAT+CGG - chr1_1:77769507-77769526 Msa0045790:intron 25.0%
! AACAGAGGAAATTAATGATT+GGG - chr1_1:77769851-77769870 Msa0045790:intron 25.0%
! CTTGAAAAAGAATTTGTATC+TGG - chr1_1:77769885-77769904 Msa0045790:intron 25.0%
! TAGATAAATCTGTAAGCTAT+AGG - chr1_1:77770026-77770045 Msa0045790:CDS 25.0%
! TTTAATCTTTACAGATGCAA+AGG + chr1_1:77770086-77770105 None:intergenic 25.0%
!! ATGATTTGTAATGATTAGCA+TGG - chr1_1:77770169-77770188 Msa0045790:five_prime_UTR 25.0%
!! TTATCTAGTAGTCTGTTTTA+CGG + chr1_1:77770293-77770312 None:intergenic 25.0%
CAGATACAGATAGATACTAT+AGG - chr1_1:77757937-77757956 Msa0045790:three_prime_UTR 30.0%
AATTTACAATGCGATCATGA+AGG + chr1_1:77758211-77758230 None:intergenic 30.0%
AAAGAGATTGAGAATTTGTC+GGG - chr1_1:77758529-77758548 Msa0045790:CDS 30.0%
AAATAAGACGATTGCATACA+GGG + chr1_1:77758652-77758671 None:intergenic 30.0%
AAAATAAGACGATTGCATAC+AGG + chr1_1:77758653-77758672 None:intergenic 30.0%
!!! GCAATCGTCTTATTTTAGTT+TGG - chr1_1:77758657-77758676 Msa0045790:intron 30.0%
! TTGCAATTTACCGAAGTTTT+TGG - chr1_1:77758711-77758730 Msa0045790:intron 30.0%
CATATAACCTCCAAAAACTT+CGG + chr1_1:77758724-77758743 None:intergenic 30.0%
!! ATTATCCCGGTTTTTAATTC+TGG - chr1_1:77758765-77758784 Msa0045790:intron 30.0%
AATCTCCAGAATTAAAAACC+GGG + chr1_1:77758773-77758792 None:intergenic 30.0%
TGAAAAAACAAGCAGCATTT+CGG + chr1_1:77758833-77758852 None:intergenic 30.0%
CAGAGAAAAAATTAATTGGG+AGG + chr1_1:77758904-77758923 None:intergenic 30.0%
CAGTGAGAGTAATATATCAA+TGG + chr1_1:77759043-77759062 None:intergenic 30.0%
! ACAAAGGGGTCTTATAATTA+GGG + chr1_1:77759067-77759086 None:intergenic 30.0%
!! ATATGTGAGAAAAGTACCAA+TGG - chr1_1:77759287-77759306 Msa0045790:CDS 30.0%
!! TATGTGAGAAAAGTACCAAT+GGG - chr1_1:77759288-77759307 Msa0045790:CDS 30.0%
!! CCAATGGGTTATATAAATAG+GGG - chr1_1:77759303-77759322 Msa0045790:CDS 30.0%
GTTATATAAATAGGGGCTAA+GGG - chr1_1:77759310-77759329 Msa0045790:CDS 30.0%
ACTTTAAATCGTGAATGCAA+TGG - chr1_1:77759434-77759453 Msa0045790:intron 30.0%
!!! TTATTCTACTGGTTCTTTTC+AGG - chr1_1:77759487-77759506 Msa0045790:intron 30.0%
AAAACATCGCGAAAATTTAG+TGG + chr1_1:77759545-77759564 None:intergenic 30.0%
TTGGTATAACATTATACCAG+CGG + chr1_1:77759661-77759680 None:intergenic 30.0%
ATTAAACAAACAGTGCATCT+TGG + chr1_1:77759758-77759777 None:intergenic 30.0%
CTCTCAAACACATGAAATAT+AGG - chr1_1:77759801-77759820 Msa0045790:intron 30.0%
AGGGAAAAAATATGCTGTAT+TGG + chr1_1:77759833-77759852 None:intergenic 30.0%
GTAGGTATACAGGTTAAAAA+GGG + chr1_1:77759852-77759871 None:intergenic 30.0%
AGTAGGTATACAGGTTAAAA+AGG + chr1_1:77759853-77759872 None:intergenic 30.0%
TACAATACATTTGTGAAGTG+AGG - chr1_1:77759930-77759949 Msa0045790:intron 30.0%
ATATAACACCCAAACTATCT+CGG + chr1_1:77759979-77759998 None:intergenic 30.0%
! ATGATTCTTTTACCATCATG+AGG + chr1_1:77760301-77760320 None:intergenic 30.0%
TGATGGTAAAAGAATCATAC+TGG - chr1_1:77760303-77760322 Msa0045790:intron 30.0%
!! GTTATAATTGCTGATAATGG+AGG - chr1_1:77760340-77760359 Msa0045790:intron 30.0%
ATAGAAAAAAGTTAACCCTG+CGG + chr1_1:77760370-77760389 None:intergenic 30.0%
GTTGATTGCAAATCATAATG+AGG + chr1_1:77760486-77760505 None:intergenic 30.0%
CGAATACACTTATATAACAC+AGG + chr1_1:77760547-77760566 None:intergenic 30.0%
TAGTTTCATCTTCATCTTTG+TGG - chr1_1:77760579-77760598 Msa0045790:intron 30.0%
!! AAGTACTGGTAAGGATTATT+GGG - chr1_1:77760759-77760778 Msa0045790:intron 30.0%
AAAATACAACTAACCGAAGA+GGG + chr1_1:77760843-77760862 None:intergenic 30.0%
AAAAATACAACTAACCGAAG+AGG + chr1_1:77760844-77760863 None:intergenic 30.0%
TGAATTCATGAAATACTTGG+AGG - chr1_1:77760877-77760896 Msa0045790:CDS 30.0%
! ATCTTGTGAATTTTGAGCTT+AGG - chr1_1:77760979-77760998 Msa0045790:intron 30.0%
CGGATAAAACCATAAAACTT+AGG + chr1_1:77761217-77761236 None:intergenic 30.0%
AATCAATTATGAATCACTGC+TGG + chr1_1:77761310-77761329 None:intergenic 30.0%
ATGACACCAGTATAATATGT+AGG - chr1_1:77761436-77761455 Msa0045790:intron 30.0%
CTAGTACCTACATATTATAC+TGG + chr1_1:77761445-77761464 None:intergenic 30.0%
TAGCATTGTGATGATAACTT+TGG - chr1_1:77761474-77761493 Msa0045790:intron 30.0%
AGCATTGTGATGATAACTTT+GGG - chr1_1:77761475-77761494 Msa0045790:intron 30.0%
AACTAGACATGATACTTGTT+TGG - chr1_1:77761668-77761687 Msa0045790:intron 30.0%
ACTAGACATGATACTTGTTT+GGG - chr1_1:77761669-77761688 Msa0045790:intron 30.0%
AATTGATTATAAAGCTGCTG+AGG - chr1_1:77761983-77762002 Msa0045790:intron 30.0%
!!! TGAAGACAAGCCTATTTTTA+GGG + chr1_1:77762275-77762294 None:intergenic 30.0%
ATAGGTCGAAAATAAAACCT+CGG + chr1_1:77762369-77762388 None:intergenic 30.0%
!! ACCTATTTTCTTTAAGGAAG+AGG - chr1_1:77762383-77762402 Msa0045790:intron 30.0%
ACCTCTTCCTTAAAGAAAAT+AGG + chr1_1:77762387-77762406 None:intergenic 30.0%
TGATAAATGTCAGAATGTTG+GGG + chr1_1:77762488-77762507 None:intergenic 30.0%
! TTTGAGCAAAAAGGTATGAA+AGG + chr1_1:77762590-77762609 None:intergenic 30.0%
! TTTAAAGCCTGTAAAATGGT+TGG + chr1_1:77762840-77762859 None:intergenic 30.0%
CTTCAATCCTTCCTATATTT+AGG + chr1_1:77763061-77763080 None:intergenic 30.0%
CTAAATATAGGAAGGATTGA+AGG - chr1_1:77763059-77763078 Msa0045790:intron 30.0%
TGAAGGAATCTAAACAAGAA+TGG - chr1_1:77763076-77763095 Msa0045790:intron 30.0%
! TTTTTATGATACTAGACTCG+AGG + chr1_1:77763105-77763124 None:intergenic 30.0%
!!! CTGACAACTTTTTTTGAAAG+GGG + chr1_1:77763222-77763241 None:intergenic 30.0%
TAGTTGAGATATCTACTAAC+GGG + chr1_1:77763406-77763425 None:intergenic 30.0%
ATATCTCAACTAATGTAAGC+AGG - chr1_1:77763414-77763433 Msa0045790:intron 30.0%
! TAGAGAAGAACTTTTGTGTT+GGG + chr1_1:77763878-77763897 None:intergenic 30.0%
! GGGTGCTATATATAACAAAT+GGG + chr1_1:77764207-77764226 None:intergenic 30.0%
ATGTATATAAGAACCTACAC+GGG + chr1_1:77764228-77764247 None:intergenic 30.0%
! GTATCAATATTGATGACAAG+AGG + chr1_1:77764278-77764297 None:intergenic 30.0%
TGCCATTGTTAAAATGATCT+CGG - chr1_1:77764350-77764369 Msa0045790:intron 30.0%
! GTTTTCTAAATTCTAGTAGC+TGG + chr1_1:77764519-77764538 None:intergenic 30.0%
! ATCTAAAGCCTAAAGCTATT+TGG + chr1_1:77764555-77764574 None:intergenic 30.0%
!! TTAGGCTTTAGATGAAGTTA+AGG - chr1_1:77764562-77764581 Msa0045790:intron 30.0%
TGGGCAAAAAAATTCATAAG+AGG + chr1_1:77764793-77764812 None:intergenic 30.0%
AGATAATTTGAGAGCTGTTA+TGG - chr1_1:77764891-77764910 Msa0045790:intron 30.0%
! TGGAGACATTCAATTGTTTT+TGG - chr1_1:77764911-77764930 Msa0045790:intron 30.0%
AGAAGACATGATTTAGTGTT+TGG + chr1_1:77765195-77765214 None:intergenic 30.0%
ATTTGACAGACAACAAAAAG+AGG - chr1_1:77765226-77765245 Msa0045790:CDS 30.0%
! TCTTTTATCCATCACTTCAA+CGG - chr1_1:77765468-77765487 Msa0045790:intron 30.0%
TGAACACTGTATTGAAAATG+AGG - chr1_1:77765494-77765513 Msa0045790:intron 30.0%
GAACACTGTATTGAAAATGA+GGG - chr1_1:77765495-77765514 Msa0045790:intron 30.0%
GTTATACCATATGAATGGAA+TGG - chr1_1:77765540-77765559 Msa0045790:intron 30.0%
!! TGTGGATTTTGACAATTACA+GGG + chr1_1:77765634-77765653 None:intergenic 30.0%
GAAAATGCTCAATATTACGA+AGG + chr1_1:77765690-77765709 None:intergenic 30.0%
ATAACAAACATGTTCCTGTA+AGG + chr1_1:77765745-77765764 None:intergenic 30.0%
ATACCTTTATCCCTTTCAAT+TGG - chr1_1:77765917-77765936 Msa0045790:intron 30.0%
!! TCAATTGGTTCAAATTTTCG+GGG - chr1_1:77765932-77765951 Msa0045790:intron 30.0%
TATGTCAACTTTGTGTTCAT+AGG - chr1_1:77765991-77766010 Msa0045790:intron 30.0%
TACTATTACTGAAGGATTAG+AGG + chr1_1:77766239-77766258 None:intergenic 30.0%
GGTGAAATTACTATTACTGA+AGG + chr1_1:77766247-77766266 None:intergenic 30.0%
TAATAGTAATTTCACCCTTC+TGG - chr1_1:77766251-77766270 Msa0045790:intron 30.0%
!! TAACGACACTCATTTTGAAA+CGG + chr1_1:77766702-77766721 None:intergenic 30.0%
! ATACACACCAATAGTTGATA+GGG + chr1_1:77766793-77766812 None:intergenic 30.0%
TAAAGTAGAAGATAGTGCTT+TGG - chr1_1:77766829-77766848 Msa0045790:intron 30.0%
AAAGTAGAAGATAGTGCTTT+GGG - chr1_1:77766830-77766849 Msa0045790:intron 30.0%
ACCAAATAAGTTGTTACCTA+CGG - chr1_1:77767070-77767089 Msa0045790:intron 30.0%
GTTGTAGGTTAATACTTCTT+TGG - chr1_1:77767201-77767220 Msa0045790:intron 30.0%
AATCAAAATATCAAACTGGG+CGG + chr1_1:77767390-77767409 None:intergenic 30.0%
AAATTTCTGTATTTGACTGC+TGG + chr1_1:77767521-77767540 None:intergenic 30.0%
TACAGAAATTTATGAGAAGC+AGG - chr1_1:77767530-77767549 Msa0045790:intron 30.0%
AGAAACTATTAGGAAAGACT+TGG + chr1_1:77768118-77768137 None:intergenic 30.0%
! TGACTCTAAGAGAAACTATT+AGG + chr1_1:77768128-77768147 None:intergenic 30.0%
TAGGAAGAAAAAAAAACGGA+GGG + chr1_1:77768418-77768437 None:intergenic 30.0%
ATAGGAAGAAAAAAAAACGG+AGG + chr1_1:77768419-77768438 None:intergenic 30.0%
GTTCCAATATGGTTAATACA+AGG + chr1_1:77768485-77768504 None:intergenic 30.0%
TCACAACAAATGTTCCAATA+TGG + chr1_1:77768496-77768515 None:intergenic 30.0%
TGTCTCCTCAAGAAAAATTA+AGG + chr1_1:77768766-77768785 None:intergenic 30.0%
! TTAATTTTTCTTGAGGAGAC+AGG - chr1_1:77768765-77768784 Msa0045790:intron 30.0%
ATTCACAAGTATTAAGTCCA+AGG - chr1_1:77768819-77768838 Msa0045790:intron 30.0%
! TTTGAGTGATTTTGAATTGC+TGG - chr1_1:77768891-77768910 Msa0045790:intron 30.0%
AGGGGAGAAATAATTTGAAA+AGG + chr1_1:77768931-77768950 None:intergenic 30.0%
! TCAAATTATTTCTCCCCTAA+TGG - chr1_1:77768933-77768952 Msa0045790:intron 30.0%
! AAGTGCAATTTTTCCATTAG+GGG + chr1_1:77768949-77768968 None:intergenic 30.0%
! GAAAAATTGCACTTTTATCC+TGG - chr1_1:77768955-77768974 Msa0045790:intron 30.0%
!!! TTTTTTTCCCTTCAATTCAG+TGG - chr1_1:77768988-77769007 Msa0045790:intron 30.0%
TCTTTCTTACTAACTATGTC+GGG - chr1_1:77769276-77769295 Msa0045790:intron 30.0%
!!! GAAAACAGAATGGTTTTAAC+AGG + chr1_1:77769407-77769426 None:intergenic 30.0%
ATGATAAGATGTTCTTAGCA+GGG + chr1_1:77769432-77769451 None:intergenic 30.0%
TATGATAAGATGTTCTTAGC+AGG + chr1_1:77769433-77769452 None:intergenic 30.0%
TGCTAAGAACATCTTATCAT+AGG - chr1_1:77769432-77769451 Msa0045790:intron 30.0%
!! TTCCATTTAACTTGCTTATC+GGG - chr1_1:77769508-77769527 Msa0045790:intron 30.0%
! ATGAGTTCGTAACTTTTCAA+TGG + chr1_1:77769580-77769599 None:intergenic 30.0%
! AAAGTTACGAACTCATTTTG+AGG - chr1_1:77769584-77769603 Msa0045790:CDS 30.0%
CAACAGAGGAAATTAATGAT+TGG - chr1_1:77769850-77769869 Msa0045790:intron 30.0%
TAAATCTGTAAGCTATAGGT+TGG - chr1_1:77770030-77770049 Msa0045790:CDS 30.0%
TACAAATTCAGTGCTTTACA+GGG + chr1_1:77770128-77770147 None:intergenic 30.0%
TTACAAATTCAGTGCTTTAC+AGG + chr1_1:77770129-77770148 None:intergenic 30.0%
!! GTTTTGCTTCAGTTTTCAAG+AGG + chr1_1:77757897-77757916 None:intergenic 35.0%
!!! ATTTTTTGACGGTGTTAGTG+AGG + chr1_1:77758133-77758152 None:intergenic 35.0%
! AATGCGATCATGAAGGATTT+TGG + chr1_1:77758204-77758223 None:intergenic 35.0%
CCTTAATATCTTCAACAGCA+AGG + chr1_1:77758594-77758613 None:intergenic 35.0%
!! CCTTGCTGTTGAAGATATTA+AGG - chr1_1:77758591-77758610 Msa0045790:CDS 35.0%
GGAAAGTTTCTAACCAAAGA+AGG + chr1_1:77758631-77758650 None:intergenic 35.0%
!! CAATTTACCGAAGTTTTTGG+AGG - chr1_1:77758714-77758733 Msa0045790:intron 35.0%
GATGGAATTCTGACTTTACA+TGG + chr1_1:77758986-77759005 None:intergenic 35.0%
ATATCAATGGGCATGCAAAA+TGG + chr1_1:77759030-77759049 None:intergenic 35.0%
! CACAAAGGGGTCTTATAATT+AGG + chr1_1:77759068-77759087 None:intergenic 35.0%
GACAAACAATTGTCACAAAG+GGG + chr1_1:77759081-77759100 None:intergenic 35.0%
GGACAAACAATTGTCACAAA+GGG + chr1_1:77759082-77759101 None:intergenic 35.0%
TGGACAAACAATTGTCACAA+AGG + chr1_1:77759083-77759102 None:intergenic 35.0%
GTCACTAAATTGCTCGTTTA+TGG + chr1_1:77759232-77759251 None:intergenic 35.0%
CCCCTATTTATATAACCCAT+TGG + chr1_1:77759306-77759325 None:intergenic 35.0%
GGTTATATAAATAGGGGCTA+AGG - chr1_1:77759309-77759328 Msa0045790:CDS 35.0%
! CGATGTTTTTCTTCAAAGTC+AGG - chr1_1:77759556-77759575 Msa0045790:intron 35.0%
GTAATATCCCGAGATAGTTT+GGG - chr1_1:77759968-77759987 Msa0045790:intron 35.0%
TATAACACCCAAACTATCTC+GGG + chr1_1:77759978-77759997 None:intergenic 35.0%
! TTTTTCCTTCCTGATTGTGT+GGG - chr1_1:77760056-77760075 Msa0045790:intron 35.0%
TTATGGTAGTATCCTCATGA+TGG - chr1_1:77760286-77760305 Msa0045790:intron 35.0%
! TTTGGAGCTTCAATAATCTG+AGG + chr1_1:77760394-77760413 None:intergenic 35.0%
! AAATGGTTTGGACATGTCTA+TGG + chr1_1:77760628-77760647 None:intergenic 35.0%
AGACAAAGCCTATAGGAATA+AGG + chr1_1:77760659-77760678 None:intergenic 35.0%
ATCTTGTAAGCTGCTTACTA+TGG + chr1_1:77760708-77760727 None:intergenic 35.0%
AGTAAGCAGCTTACAAGATT+TGG - chr1_1:77760709-77760728 Msa0045790:CDS 35.0%
!! GAAGTACTGGTAAGGATTAT+TGG - chr1_1:77760758-77760777 Msa0045790:intron 35.0%
!! AGTACTGGTAAGGATTATTG+GGG - chr1_1:77760760-77760779 Msa0045790:intron 35.0%
AATATCGGTAGACATAAGTG+AGG + chr1_1:77760786-77760805 None:intergenic 35.0%
AGGTTTGAACTTTGATGCAT+TGG - chr1_1:77760897-77760916 Msa0045790:CDS 35.0%
TGAGCTTAGGTATATAGATG+TGG - chr1_1:77760992-77761011 Msa0045790:intron 35.0%
GAGCTTAGGTATATAGATGT+GGG - chr1_1:77760993-77761012 Msa0045790:intron 35.0%
!! ATTGATTTTCAACCCAGTGA+TGG + chr1_1:77761121-77761140 None:intergenic 35.0%
AAATCAATTCTGATCTCGCA+AGG - chr1_1:77761133-77761152 Msa0045790:intron 35.0%
! TGCTAGACACCTAAGTTTTA+TGG - chr1_1:77761205-77761224 Msa0045790:intron 35.0%
!!! GTGTGGCTATTTTTGTAGTA+AGG - chr1_1:77761358-77761377 Msa0045790:intron 35.0%
AGTAAGGACAATGTTGCTAT+AGG - chr1_1:77761374-77761393 Msa0045790:intron 35.0%
GTAAGGACAATGTTGCTATA+GGG - chr1_1:77761375-77761394 Msa0045790:intron 35.0%
!! ACTGGTGTCATATAAGATCA+AGG + chr1_1:77761427-77761446 None:intergenic 35.0%
! TATGTAGGTACTAGCCTATT+AGG - chr1_1:77761451-77761470 Msa0045790:intron 35.0%
TCATCACAATGCTACCTAAT+AGG + chr1_1:77761468-77761487 None:intergenic 35.0%
ATTGTGATGATAACTTTGGG+TGG - chr1_1:77761478-77761497 Msa0045790:intron 35.0%
TCACCTAAATCAATCGTACA+GGG + chr1_1:77761571-77761590 None:intergenic 35.0%
TTCACCTAAATCAATCGTAC+AGG + chr1_1:77761572-77761591 None:intergenic 35.0%
! ACGATTGATTTAGGTGAAAC+TGG - chr1_1:77761574-77761593 Msa0045790:intron 35.0%
TTGATTTAGGTGAAACTGGT+AGG - chr1_1:77761578-77761597 Msa0045790:intron 35.0%
AGTGAGATAACAACTTCACA+GGG - chr1_1:77761948-77761967 Msa0045790:intron 35.0%
TTATTCCAGAGCTTATTGAG+AGG + chr1_1:77762140-77762159 None:intergenic 35.0%
!! CTGAAGACAAGCCTATTTTT+AGG + chr1_1:77762276-77762295 None:intergenic 35.0%
!! TTTAAGGAAGAGGTGTTACT+AGG - chr1_1:77762393-77762412 Msa0045790:intron 35.0%
ACAGAATTCAAGAAGCTATG+TGG + chr1_1:77762428-77762447 None:intergenic 35.0%
ACATAGCTTCTTGAATTCTG+TGG - chr1_1:77762427-77762446 Msa0045790:intron 35.0%
CATAGCTTCTTGAATTCTGT+GGG - chr1_1:77762428-77762447 Msa0045790:intron 35.0%
!!! TTTTTCGAGTTTTGTGAGCA+AGG - chr1_1:77762686-77762705 Msa0045790:intron 35.0%
AGTCAATCACTCGTTAGTAA+AGG + chr1_1:77762728-77762747 None:intergenic 35.0%
! GATTAGAATTTGTTCCAGAC+TGG - chr1_1:77762875-77762894 Msa0045790:CDS 35.0%
!!! GGAGTTTCTTTTGGAATGAT+AGG - chr1_1:77762990-77763009 Msa0045790:intron 35.0%
!!! CTTTTGGAATGATAGGAGAA+AGG - chr1_1:77762997-77763016 Msa0045790:intron 35.0%
!!! TTTTTTGAAAGGGGAAGGAT+TGG + chr1_1:77763213-77763232 None:intergenic 35.0%
!!! CAACTTTTTTTGAAAGGGGA+AGG + chr1_1:77763218-77763237 None:intergenic 35.0%
AAGTTGTCAGTTGTAATGGT+TGG - chr1_1:77763232-77763251 Msa0045790:intron 35.0%
AAAATATTGGGGGGATGATA+AGG + chr1_1:77763313-77763332 None:intergenic 35.0%
TATTCGGGAGCAAAATATTG+GGG + chr1_1:77763324-77763343 None:intergenic 35.0%
CTATTCGGGAGCAAAATATT+GGG + chr1_1:77763325-77763344 None:intergenic 35.0%
ACTATTCGGGAGCAAAATAT+TGG + chr1_1:77763326-77763345 None:intergenic 35.0%
ATCAATAGAACTTGCAATGG+TGG - chr1_1:77763443-77763462 Msa0045790:intron 35.0%
! TAAATAGGTTGACAAGCTGA+AGG - chr1_1:77763604-77763623 Msa0045790:intron 35.0%
! AAAAGCGTATTTCTGACAAC+AGG - chr1_1:77763666-77763685 Msa0045790:intron 35.0%
! CTAGAGAAGAACTTTTGTGT+TGG + chr1_1:77763879-77763898 None:intergenic 35.0%
CAACACAAAAGTTCTTCTCT+AGG - chr1_1:77763877-77763896 Msa0045790:intron 35.0%
TTGCTTGCATAATCTCTATG+TGG - chr1_1:77764164-77764183 Msa0045790:intron 35.0%
! GGGGTGCTATATATAACAAA+TGG + chr1_1:77764208-77764227 None:intergenic 35.0%
TGTATATAAGAACCTACACG+GGG + chr1_1:77764227-77764246 None:intergenic 35.0%
GCCATTGTTAAAATGATCTC+GGG - chr1_1:77764351-77764370 Msa0045790:intron 35.0%
TAGTTACCCCTGATATCTAA+TGG + chr1_1:77764377-77764396 None:intergenic 35.0%
AGTAGACTACTTCTAGTAGA+TGG + chr1_1:77764471-77764490 None:intergenic 35.0%
ACGAAAATATGGCATTTAGG+CGG + chr1_1:77764598-77764617 None:intergenic 35.0%
GAGACGAAAATATGGCATTT+AGG + chr1_1:77764601-77764620 None:intergenic 35.0%
GCAAATAACTGAGATTTCCA+TGG - chr1_1:77764652-77764671 Msa0045790:intron 35.0%
! TGTAGCATCACACTGTTTTA+CGG + chr1_1:77764691-77764710 None:intergenic 35.0%
!!! ATTTTTTTGCCCACATTACG+TGG - chr1_1:77764800-77764819 Msa0045790:intron 35.0%
!!! TTTTTTTGCCCACATTACGT+GGG - chr1_1:77764801-77764820 Msa0045790:intron 35.0%
!! TTTTTCCATTTTGATGGAGG+AGG - chr1_1:77764846-77764865 Msa0045790:intron 35.0%
!! TTTTCCATTTTGATGGAGGA+GGG - chr1_1:77764847-77764866 Msa0045790:intron 35.0%
!!! TTGTTTTTGGCTCAAAAACG+AGG - chr1_1:77764924-77764943 Msa0045790:intron 35.0%
GTGTCAAATTCTAGTCAATC+CGG - chr1_1:77765001-77765020 Msa0045790:intron 35.0%
AAGAAAAATAAGACCCTGCA+CGG + chr1_1:77765149-77765168 None:intergenic 35.0%
TTAAAAGTTCGCGTGACTAA+AGG - chr1_1:77765254-77765273 Msa0045790:CDS 35.0%
! TTTGATGATTGTACATGACC+AGG - chr1_1:77765384-77765403 Msa0045790:intron 35.0%
!! CTGTGGATTTTGACAATTAC+AGG + chr1_1:77765635-77765654 None:intergenic 35.0%
GAATATCCTTAATGCCTTAC+AGG - chr1_1:77765728-77765747 Msa0045790:intron 35.0%
CACGGAAAAGATACATATCA+TGG + chr1_1:77765780-77765799 None:intergenic 35.0%
AAAAAGAACACCCAAGTGAT+GGG + chr1_1:77765836-77765855 None:intergenic 35.0%
TCATTCGCTTATAATGCAGA+AGG - chr1_1:77765873-77765892 Msa0045790:intron 35.0%
GAACCAATTGAAAGGGATAA+AGG + chr1_1:77765923-77765942 None:intergenic 35.0%
!! CAATTGGTTCAAATTTTCGG+GGG - chr1_1:77765933-77765952 Msa0045790:intron 35.0%
!! GGGGATGAATTTAAGTTTTG+TGG - chr1_1:77765959-77765978 Msa0045790:intron 35.0%
!!! TCTTCTTGCCTTTTGTTTTC+AGG - chr1_1:77766041-77766060 Msa0045790:intron 35.0%
TGTCAGTTCCTGAAAACAAA+AGG + chr1_1:77766052-77766071 None:intergenic 35.0%
TCTTGAAGCTGAACTGAAAA+AGG - chr1_1:77766107-77766126 Msa0045790:intron 35.0%
! TAACATGTTTAGCTCCAGAA+GGG + chr1_1:77766268-77766287 None:intergenic 35.0%
! ATAACATGTTTAGCTCCAGA+AGG + chr1_1:77766269-77766288 None:intergenic 35.0%
! TTAAGGCCAAATACCTCTTT+TGG - chr1_1:77766293-77766312 Msa0045790:intron 35.0%
!! AAAGGACCAAAAGAGGTATT+TGG + chr1_1:77766302-77766321 None:intergenic 35.0%
ACGGACTTAAAGAACTAACA+CGG + chr1_1:77766343-77766362 None:intergenic 35.0%
! TTAAGTCCGTTACCCTTTTA+AGG - chr1_1:77766353-77766372 Msa0045790:intron 35.0%
ATAGGTCCTTAAAAGGGTAA+CGG + chr1_1:77766362-77766381 None:intergenic 35.0%
AAGCAATGGAACAGAATCAA+AGG + chr1_1:77766603-77766622 None:intergenic 35.0%
GATACACACCAATAGTTGAT+AGG + chr1_1:77766794-77766813 None:intergenic 35.0%
AAACGACACTCGTTATGAAA+CGG - chr1_1:77766957-77766976 Msa0045790:intron 35.0%
! TCGATATGTCTTGTTCTATG+AGG - chr1_1:77767046-77767065 Msa0045790:CDS 35.0%
TCCGTAGGTAACAACTTATT+TGG + chr1_1:77767074-77767093 None:intergenic 35.0%
AGTTGAGCATCTGAAGATAA+AGG - chr1_1:77767294-77767313 Msa0045790:intron 35.0%
!! TTAAGCAGCGTTGATTTAAC+AGG + chr1_1:77767351-77767370 None:intergenic 35.0%
! TTGATTTGACCTTGATTGAC+AGG - chr1_1:77767404-77767423 Msa0045790:CDS 35.0%
TTTCATCTTCCTGTCAATCA+AGG + chr1_1:77767416-77767435 None:intergenic 35.0%
AATCAGATGTCATCAAAACG+TGG - chr1_1:77767466-77767485 Msa0045790:CDS 35.0%
! TCAACTTTCTGGAAGATACT+TGG - chr1_1:77767490-77767509 Msa0045790:intron 35.0%
! CAACTTTCTGGAAGATACTT+GGG - chr1_1:77767491-77767510 Msa0045790:intron 35.0%
AAATTTATGAGAAGCAGGTC+AGG - chr1_1:77767535-77767554 Msa0045790:intron 35.0%
CATGTTTATTCTGCTGAATC+AGG + chr1_1:77767712-77767731 None:intergenic 35.0%
! AAAAGAGTATAAGCTCTCAG+AGG - chr1_1:77767811-77767830 Msa0045790:intron 35.0%
! AAAGAGTATAAGCTCTCAGA+GGG - chr1_1:77767812-77767831 Msa0045790:intron 35.0%
GATGAGAGGAAAATAGTCTT+GGG + chr1_1:77767886-77767905 None:intergenic 35.0%
AGATGAGAGGAAAATAGTCT+TGG + chr1_1:77767887-77767906 None:intergenic 35.0%
TGATGCTAACTAAATCCAAC+TGG - chr1_1:77767969-77767988 Msa0045790:intron 35.0%
GATGCTAACTAAATCCAACT+GGG - chr1_1:77767970-77767989 Msa0045790:intron 35.0%
AGACTTGGAGATTAATGAGT+TGG + chr1_1:77768103-77768122 None:intergenic 35.0%
GTAAGTAGTAAGAAGCTGAA+TGG + chr1_1:77768330-77768349 None:intergenic 35.0%
CCATTATCTGAATCAGTGAA+GGG + chr1_1:77768366-77768385 None:intergenic 35.0%
!! CCTTCACTGATTCAGATAAT+GGG - chr1_1:77768364-77768383 Msa0045790:intron 35.0%
!! TTCAGATAATGGGTGGAAAA+TGG - chr1_1:77768374-77768393 Msa0045790:intron 35.0%
TGTTTGTCTACAGAAAGAGT+TGG - chr1_1:77768457-77768476 Msa0045790:intron 35.0%
! GAGCCTTGTATTAACCATAT+TGG - chr1_1:77768479-77768498 Msa0045790:intron 35.0%
TTAGCTGGCAATTTCTTTGA+TGG - chr1_1:77768578-77768597 Msa0045790:CDS 35.0%
ATATTTGACCTATGAAGCCA+AGG - chr1_1:77768859-77768878 Msa0045790:intron 35.0%
ATTGAAGCCACTGAATTGAA+GGG + chr1_1:77768998-77769017 None:intergenic 35.0%
AATTGAAGCCACTGAATTGA+AGG + chr1_1:77768999-77769018 None:intergenic 35.0%
AAAAGAGTCCACAATATGAC+AGG + chr1_1:77769036-77769055 None:intergenic 35.0%
CAAGAAAACATGGAGAATCA+TGG + chr1_1:77769168-77769187 None:intergenic 35.0%
TATTACCACTTTCAGTGTAG+TGG - chr1_1:77769196-77769215 Msa0045790:intron 35.0%
! AAACTCAAACCTTTTCTCAC+TGG - chr1_1:77769359-77769378 Msa0045790:intron 35.0%
AACCCGATAAGCAAGTTAAA+TGG + chr1_1:77769513-77769532 None:intergenic 35.0%
! TGTCTCTGTCTTTGAAAACT+CGG + chr1_1:77769721-77769740 None:intergenic 35.0%
! GATTTGAGTGAAGGTGATTT+TGG + chr1_1:77769753-77769772 None:intergenic 35.0%
ACTCAAATCAGATCAGGTAT+TGG - chr1_1:77769764-77769783 Msa0045790:intron 35.0%
TACTCAAGATTACTCAACAG+AGG - chr1_1:77769836-77769855 Msa0045790:intron 35.0%
GGTTTCGAAATTGGAATGCA+CGG + chr1_1:77757966-77757985 None:intergenic 40.0%
AGGGTTTGTGGTTTCGAAAT+TGG + chr1_1:77757975-77757994 None:intergenic 40.0%
GCAATGGAAATTAGGGTTTG+TGG + chr1_1:77757987-77758006 None:intergenic 40.0%
GAAGCGTGCAATGGAAATTA+GGG + chr1_1:77757994-77758013 None:intergenic 40.0%
TGAAGCGTGCAATGGAAATT+AGG + chr1_1:77757995-77758014 None:intergenic 40.0%
ATGACATGGTTTCGATACAG+AGG + chr1_1:77758058-77758077 None:intergenic 40.0%
!!! GGTGTCGGCATATTTTTTGA+CGG + chr1_1:77758144-77758163 None:intergenic 40.0%
TGCACAGACAGTCAAAAGAT+TGG - chr1_1:77758438-77758457 Msa0045790:CDS 40.0%
ATTGTGTTACCTCAGTTCTC+AGG - chr1_1:77759346-77759365 Msa0045790:CDS 40.0%
! TAGTTTTCACCTGAGAACTG+AGG + chr1_1:77759358-77759377 None:intergenic 40.0%
! TTTTCTTCAAAGTCAGGCAC+TGG - chr1_1:77759562-77759581 Msa0045790:intron 40.0%
! GGAGGGTATAACACTATCAA+TGG - chr1_1:77759583-77759602 Msa0045790:intron 40.0%
TGTGCATAGACTAGACCTAT+GGG - chr1_1:77759694-77759713 Msa0045790:intron 40.0%
TACGGTAGTAGTAGGTATAC+AGG + chr1_1:77759862-77759881 None:intergenic 40.0%
TTCAAGAAGTCCTGGCAAAA+AGG - chr1_1:77759886-77759905 Msa0045790:intron 40.0%
TCAAGAAGTCCTGGCAAAAA+GGG - chr1_1:77759887-77759906 Msa0045790:intron 40.0%
AGTGAGGCATGACATTAACT+TGG - chr1_1:77759946-77759965 Msa0045790:intron 40.0%
GGTAATATCCCGAGATAGTT+TGG - chr1_1:77759967-77759986 Msa0045790:intron 40.0%
! CTTTTTCCTTCCTGATTGTG+TGG - chr1_1:77760055-77760074 Msa0045790:intron 40.0%
GATTATTGAAGCTCCAAACG+AGG - chr1_1:77760396-77760415 Msa0045790:intron 40.0%
! TCCTATAGGCTTTGTCTTAC+TGG - chr1_1:77760662-77760681 Msa0045790:CDS 40.0%
! CCTATAGGCTTTGTCTTACT+GGG - chr1_1:77760663-77760682 Msa0045790:CDS 40.0%
AAGCTACCAAGATGAAGTAC+TGG - chr1_1:77760745-77760764 Msa0045790:intron 40.0%
!! ACCAAGATGAAGTACTGGTA+AGG - chr1_1:77760750-77760769 Msa0045790:intron 40.0%
TCCTTACCAGTACTTCATCT+TGG + chr1_1:77760754-77760773 None:intergenic 40.0%
! TATGTTTTCTCCTCCCTCTT+CGG - chr1_1:77760827-77760846 Msa0045790:intron 40.0%
GAACTTACTAGATGCGTGAA+TGG + chr1_1:77761037-77761056 None:intergenic 40.0%
ACTTAGGTGTCTAGCAGAAA+TGG + chr1_1:77761201-77761220 None:intergenic 40.0%
TATGAATCACTGCTGGAGAA+AGG + chr1_1:77761303-77761322 None:intergenic 40.0%
ATGTTGCTATAGGGAACATC+AGG - chr1_1:77761384-77761403 Msa0045790:intron 40.0%
! AACCCCTGTACGATTGATTT+AGG - chr1_1:77761565-77761584 Msa0045790:intron 40.0%
CACCTAAATCAATCGTACAG+GGG + chr1_1:77761570-77761589 None:intergenic 40.0%
AGGTAACAGTTATGTTTCCC+AGG - chr1_1:77761598-77761617 Msa0045790:intron 40.0%
AGACATGATACTTGTTTGGG+TGG - chr1_1:77761672-77761691 Msa0045790:intron 40.0%
ATGATACTTGTTTGGGTGGA+GGG - chr1_1:77761676-77761695 Msa0045790:intron 40.0%
CGTATAGCGGTATGAGTATT+GGG + chr1_1:77761731-77761750 None:intergenic 40.0%
ACGTATAGCGGTATGAGTAT+TGG + chr1_1:77761732-77761751 None:intergenic 40.0%
CCTTAACAGATGACGTATAG+CGG + chr1_1:77761744-77761763 None:intergenic 40.0%
CGCTATACGTCATCTGTTAA+GGG - chr1_1:77761742-77761761 Msa0045790:intron 40.0%
TACGTCATCTGTTAAGGGTT+CGG - chr1_1:77761747-77761766 Msa0045790:intron 40.0%
CAAAGCAATCTTTCCCTGAA+TGG + chr1_1:77761779-77761798 None:intergenic 40.0%
ATTATGCCCTCTTGTCCAAT+CGG - chr1_1:77761801-77761820 Msa0045790:intron 40.0%
! TTGGTAATCATGGATCCGAT+TGG + chr1_1:77761819-77761838 None:intergenic 40.0%
CAGTGAGATAACAACTTCAC+AGG - chr1_1:77761947-77761966 Msa0045790:intron 40.0%
GTGAGATAACAACTTCACAG+GGG - chr1_1:77761949-77761968 Msa0045790:intron 40.0%
TGAGATAACAACTTCACAGG+GGG - chr1_1:77761950-77761969 Msa0045790:intron 40.0%
TACAACAGAACACACCTGTA+GGG + chr1_1:77762021-77762040 None:intergenic 40.0%
TTACAACAGAACACACCTGT+AGG + chr1_1:77762022-77762041 None:intergenic 40.0%
AATAAAGGGCAACAGGAAGA+AGG + chr1_1:77762045-77762064 None:intergenic 40.0%
CTGACAAAATAAAGGGCAAC+AGG + chr1_1:77762052-77762071 None:intergenic 40.0%
GTTAACCTCTCAATAAGCTC+TGG - chr1_1:77762132-77762151 Msa0045790:intron 40.0%
! TAACCAGCCAACCATTTTAC+AGG - chr1_1:77762830-77762849 Msa0045790:intron 40.0%
!! CAGGCTTTAAAAGTTGCACT+CGG - chr1_1:77762849-77762868 Msa0045790:intron 40.0%
! AGAATTTGTTCCAGACTGGA+AGG - chr1_1:77762879-77762898 Msa0045790:CDS 40.0%
! CTCTCTGTAGGAGTTTCTTT+TGG - chr1_1:77762981-77763000 Msa0045790:intron 40.0%
! AAGGATTGGCAACTAGAGAA+GGG + chr1_1:77763199-77763218 None:intergenic 40.0%
TGGCTAATGTTTGCTCTGTT+TGG + chr1_1:77763272-77763291 None:intergenic 40.0%
ATTCGGGAGCAAAATATTGG+GGG + chr1_1:77763323-77763342 None:intergenic 40.0%
TCGGCAGTTTGCATACTATT+CGG + chr1_1:77763340-77763359 None:intergenic 40.0%
! CACCTGGTATTTTCGTTGTT+CGG + chr1_1:77763359-77763378 None:intergenic 40.0%
CGAAAATACCAGGTGTCTTA+AGG - chr1_1:77763364-77763383 Msa0045790:intron 40.0%
AAATACCAGGTGTCTTAAGG+AGG - chr1_1:77763367-77763386 Msa0045790:intron 40.0%
AATACCAGGTGTCTTAAGGA+GGG - chr1_1:77763368-77763387 Msa0045790:intron 40.0%
TCTACTAACGGGATTATCAG+TGG + chr1_1:77763395-77763414 None:intergenic 40.0%
TCAACTAATGTAAGCAGGAG+TGG - chr1_1:77763419-77763438 Msa0045790:intron 40.0%
CAACTAATGTAAGCAGGAGT+GGG - chr1_1:77763420-77763439 Msa0045790:intron 40.0%
GGGATCAATAGAACTTGCAA+TGG - chr1_1:77763440-77763459 Msa0045790:intron 40.0%
TGACAAGCTGAAGGTCTTAA+CGG - chr1_1:77763613-77763632 Msa0045790:intron 40.0%
TCTTGCTAACAAGTTCCCTA+AGG - chr1_1:77763761-77763780 Msa0045790:intron 40.0%
CTTGCTAACAAGTTCCCTAA+GGG - chr1_1:77763762-77763781 Msa0045790:intron 40.0%
CTTCTTAACAAGTGCCCTTA+GGG - chr1_1:77763900-77763919 Msa0045790:intron 40.0%
TTATATATAGCACCCCGTGT+AGG - chr1_1:77764212-77764231 Msa0045790:intron 40.0%
!! GCCCGAGATCATTTTAACAA+TGG + chr1_1:77764355-77764374 None:intergenic 40.0%
AGTGAGAGATTGGGAGTAAT+CGG - chr1_1:77764396-77764415 Msa0045790:intron 40.0%
! GACACTGGCCTATATATAAC+AGG - chr1_1:77764418-77764437 Msa0045790:intron 40.0%
GCAGAAGTCCAAATAGCTTT+AGG - chr1_1:77764544-77764563 Msa0045790:intron 40.0%
AACTGAGATTTCCATGGACA+CGG - chr1_1:77764658-77764677 Msa0045790:intron 40.0%
GACTAGAATTTGACACTGAC+AGG + chr1_1:77764997-77765016 None:intergenic 40.0%
CAGCTTATGTAGATGAAACC+AGG - chr1_1:77765117-77765136 Msa0045790:intron 40.0%
TGACAGACAACAAAAAGAGG+AGG - chr1_1:77765229-77765248 Msa0045790:CDS 40.0%
TGAAACTGGTGAAAAGGAGA+AGG - chr1_1:77765280-77765299 Msa0045790:CDS 40.0%
CAAGCATAACAATAACAGCC+TGG + chr1_1:77765405-77765424 None:intergenic 40.0%
GTTCATTACCGTTGAAGTGA+TGG + chr1_1:77765479-77765498 None:intergenic 40.0%
! GCAAGAATTGGTTTAAGCTG+TGG + chr1_1:77765652-77765671 None:intergenic 40.0%
! CATGTTCCTGTAAGGCATTA+AGG + chr1_1:77765737-77765756 None:intergenic 40.0%
GGTGTAGCGTGAACAAATTT+GGG + chr1_1:77765815-77765834 None:intergenic 40.0%
GAAAAAGAACACCCAAGTGA+TGG + chr1_1:77765837-77765856 None:intergenic 40.0%
TTCGCTTATAATGCAGAAGG+TGG - chr1_1:77765876-77765895 Msa0045790:intron 40.0%
TCGCTTATAATGCAGAAGGT+GGG - chr1_1:77765877-77765896 Msa0045790:intron 40.0%
CAGACTTAAAGGACCAAAAG+AGG + chr1_1:77766309-77766328 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+CGG + chr1_1:77766698-77766717 None:intergenic 40.0%
AAGTTGTTACCTACGGAGTT+TGG - chr1_1:77767077-77767096 Msa0045790:intron 40.0%
AGTTGTTACCTACGGAGTTT+GGG - chr1_1:77767078-77767097 Msa0045790:intron 40.0%
GATTGTTTGCTTCCTCAAAC+TGG + chr1_1:77767270-77767289 None:intergenic 40.0%
CAAAACGTGGATCAACTTTC+TGG - chr1_1:77767479-77767498 Msa0045790:intron 40.0%
TTCTGCTGAATCAGGTCTAT+CGG + chr1_1:77767704-77767723 None:intergenic 40.0%
! AGGAAAATAGTCTTGGGTTG+GGG + chr1_1:77767880-77767899 None:intergenic 40.0%
! GAGGAAAATAGTCTTGGGTT+GGG + chr1_1:77767881-77767900 None:intergenic 40.0%
! AGAGGAAAATAGTCTTGGGT+TGG + chr1_1:77767882-77767901 None:intergenic 40.0%
! CCATCAACGGGAAATTTGTT+GGG + chr1_1:77767943-77767962 None:intergenic 40.0%
ACCATCAACGGGAAATTTGT+TGG + chr1_1:77767944-77767963 None:intergenic 40.0%
TAGAGACTGAGAATATGTGG+TGG + chr1_1:77768165-77768184 None:intergenic 40.0%
CTGTAGAGACTGAGAATATG+TGG + chr1_1:77768168-77768187 None:intergenic 40.0%
CACATATTCTCAGTCTCTAC+AGG - chr1_1:77768166-77768185 Msa0045790:intron 40.0%
CTCTACAGGTATCTTTCTAC+CGG - chr1_1:77768180-77768199 Msa0045790:intron 40.0%
! CGAGGACTATTTTGTGAACT+TGG - chr1_1:77768304-77768323 Msa0045790:intron 40.0%
TCAGCTTCTTACTACTTACC+AGG - chr1_1:77768331-77768350 Msa0045790:intron 40.0%
AGTGAAGGGAAGTAAATACC+TGG + chr1_1:77768352-77768371 None:intergenic 40.0%
!! CCCTTCACTGATTCAGATAA+TGG - chr1_1:77768363-77768382 Msa0045790:intron 40.0%
CCCATTATCTGAATCAGTGA+AGG + chr1_1:77768367-77768386 None:intergenic 40.0%
!! TCACTGATTCAGATAATGGG+TGG - chr1_1:77768367-77768386 Msa0045790:intron 40.0%
GCGTAGGTCATATTACACAT+AGG + chr1_1:77768437-77768456 None:intergenic 40.0%
TTTCTGTAGACAAACAGCGT+AGG + chr1_1:77768453-77768472 None:intergenic 40.0%
ACCTCAAGAATTTGACTCAG+AGG - chr1_1:77768516-77768535 Msa0045790:intron 40.0%
ACCTCTGAGTCAAATTCTTG+AGG + chr1_1:77768520-77768539 None:intergenic 40.0%
AAGTCCAAGGAGAAATCTTG+AGG - chr1_1:77768832-77768851 Msa0045790:intron 40.0%
TCTTCCTCAAGATTTCTCCT+TGG + chr1_1:77768839-77768858 None:intergenic 40.0%
TCTCATTACCTTGGCTTCAT+AGG + chr1_1:77768870-77768889 None:intergenic 40.0%
CACTCAAAGTCTCATTACCT+TGG + chr1_1:77768879-77768898 None:intergenic 40.0%
AACACTGTCCTGTCATATTG+TGG - chr1_1:77769025-77769044 Msa0045790:intron 40.0%
CAGCAAGCAACAGATATTGA+GGG + chr1_1:77769132-77769151 None:intergenic 40.0%
ACAGCAAGCAACAGATATTG+AGG + chr1_1:77769133-77769152 None:intergenic 40.0%
GTTATCCACTACACTGAAAG+TGG + chr1_1:77769204-77769223 None:intergenic 40.0%
!! ACAGCAGTTTTATGCTCAAC+AGG - chr1_1:77769229-77769248 Msa0045790:intron 40.0%
!! CAGCAGTTTTATGCTCAACA+GGG - chr1_1:77769230-77769249 Msa0045790:intron 40.0%
CTCAACAGGGAAATATTTCC+AGG - chr1_1:77769243-77769262 Msa0045790:intron 40.0%
TAGCAGGGAAGAAAACAGAA+TGG + chr1_1:77769417-77769436 None:intergenic 40.0%
AACTCTCTCTTCATCTTTCC+TGG + chr1_1:77769541-77769560 None:intergenic 40.0%
!!! CTCATTTTGAGGCTATAGAG+AGG - chr1_1:77769595-77769614 Msa0045790:CDS 40.0%
ATGTTTCAGTCTTCACAGGT+GGG + chr1_1:77769641-77769660 None:intergenic 40.0%
AATGTTTCAGTCTTCACAGG+TGG + chr1_1:77769642-77769661 None:intergenic 40.0%
GGTAATGTTTCAGTCTTCAC+AGG + chr1_1:77769645-77769664 None:intergenic 40.0%
!! CCATCTGACTTTTTCTCAGA+AGG + chr1_1:77769666-77769685 None:intergenic 40.0%
! CCTTCTGAGAAAAAGTCAGA+TGG - chr1_1:77769663-77769682 Msa0045790:CDS 40.0%
! GAGTTTTCAAAGACAGAGAC+AGG - chr1_1:77769720-77769739 Msa0045790:CDS 40.0%
ACCTTCACTCAAATCAGATC+AGG - chr1_1:77769758-77769777 Msa0045790:intron 40.0%
! ACCTGATCTGATTTGAGTGA+AGG + chr1_1:77769762-77769781 None:intergenic 40.0%
TCCAAACTCAGATTCAAGCT+TGG + chr1_1:77769808-77769827 None:intergenic 40.0%
GCTTGAATCTGAGTTTGGAA+AGG - chr1_1:77769809-77769828 Msa0045790:intron 40.0%
ATGAAGCTTGCAAGATCAGA+CGG - chr1_1:77770059-77770078 Msa0045790:CDS 40.0%
GAGAGAAATGAAGCGTGCAA+TGG + chr1_1:77758003-77758022 None:intergenic 45.0%
GTATCGAAACCATGTCATCG+TGG - chr1_1:77758060-77758079 Msa0045790:three_prime_UTR 45.0%
CTAAGCAACTGAACTCTCTC+AGG + chr1_1:77758490-77758509 None:intergenic 45.0%
CTGAGAGAGTTCAGTTGCTT+AGG - chr1_1:77758488-77758507 Msa0045790:CDS 45.0%
GAGTTCAGTTGCTTAGGAGA+TGG - chr1_1:77758494-77758513 Msa0045790:CDS 45.0%
TGAGAATTTGTCGGGAGCTT+CGG - chr1_1:77758537-77758556 Msa0045790:CDS 45.0%
GAATCCACAGAGACCTTCTT+TGG - chr1_1:77758615-77758634 Msa0045790:intron 45.0%
CTAACCAAAGAAGGTCTCTG+TGG + chr1_1:77758622-77758641 None:intergenic 45.0%
! CATGCAAAATGGCTGGTCAA+AGG + chr1_1:77759019-77759038 None:intergenic 45.0%
ACCAGCGGAAATTCAGCTTT+CGG + chr1_1:77759646-77759665 None:intergenic 45.0%
CTGTGCATAGACTAGACCTA+TGG - chr1_1:77759693-77759712 Msa0045790:intron 45.0%
! TGAAGCACTACGGTAGTAGT+AGG + chr1_1:77759870-77759889 None:intergenic 45.0%
! CAGGACTTCTTGAAGCACTA+CGG + chr1_1:77759880-77759899 None:intergenic 45.0%
!! TGATAATGGAGGTTAACCGC+AGG - chr1_1:77760351-77760370 Msa0045790:intron 45.0%
!! GATAATGGAGGTTAACCGCA+GGG - chr1_1:77760352-77760371 Msa0045790:intron 45.0%
CCCAGTAAGACAAAGCCTAT+AGG + chr1_1:77760666-77760685 None:intergenic 45.0%
GAAGAGGGAGGAGAAAACAT+AGG + chr1_1:77760828-77760847 None:intergenic 45.0%
ATACAACTAACCGAAGAGGG+AGG + chr1_1:77760840-77760859 None:intergenic 45.0%
CTCGCTTCACCTAAAGAACA+AGG + chr1_1:77761071-77761090 None:intergenic 45.0%
TGTTCTTTAGGTGAAGCGAG+AGG - chr1_1:77761071-77761090 Msa0045790:intron 45.0%
TCGCAAGGTCAGTACAAAAC+AGG - chr1_1:77761148-77761167 Msa0045790:intron 45.0%
CGCAAGGTCAGTACAAAACA+GGG - chr1_1:77761149-77761168 Msa0045790:intron 45.0%
AAGGTCAGTACAAAACAGGG+AGG - chr1_1:77761152-77761171 Msa0045790:intron 45.0%
AGGTCAGTACAAAACAGGGA+GGG - chr1_1:77761153-77761172 Msa0045790:intron 45.0%
CACTCTTGGAATGTGAACTC+CGG + chr1_1:77761237-77761256 None:intergenic 45.0%
GGAGTTCACATTCCAAGAGT+GGG - chr1_1:77761236-77761255 Msa0045790:intron 45.0%
TCAATCGTACAGGGGTTTGA+TGG + chr1_1:77761562-77761581 None:intergenic 45.0%
CATGATACTTGTTTGGGTGG+AGG - chr1_1:77761675-77761694 Msa0045790:intron 45.0%
CCGCTATACGTCATCTGTTA+AGG - chr1_1:77761741-77761760 Msa0045790:intron 45.0%
GCAATCTTTCCCTGAATGGA+CGG + chr1_1:77761775-77761794 None:intergenic 45.0%
ATGGATCCGATTGGACAAGA+GGG + chr1_1:77761810-77761829 None:intergenic 45.0%
! ATGCTGAAGCCTCTAGTCTT+AGG - chr1_1:77761916-77761935 Msa0045790:intron 45.0%
GAGCTTCTTCCTAAGACTAG+AGG + chr1_1:77761928-77761947 None:intergenic 45.0%
ATGTCAGAATGTTGGGGCAA+CGG + chr1_1:77762482-77762501 None:intergenic 45.0%
AAGCCTGTAAAATGGTTGGC+TGG + chr1_1:77762836-77762855 None:intergenic 45.0%
CAGCAATAATCCTTCCAGTC+TGG + chr1_1:77762892-77762911 None:intergenic 45.0%
! GAAGGATTGGCAACTAGAGA+AGG + chr1_1:77763200-77763219 None:intergenic 45.0%
TTCGGGAGCAAAATATTGGG+GGG + chr1_1:77763322-77763341 None:intergenic 45.0%
CGGCAGTTTGCATACTATTC+GGG + chr1_1:77763339-77763358 None:intergenic 45.0%
TGCCGAACAACGAAAATACC+AGG - chr1_1:77763354-77763373 Msa0045790:intron 45.0%
!! TTCCCTAAGGGCACTTGTTA+AGG - chr1_1:77763774-77763793 Msa0045790:intron 45.0%
AGCCTTAACAAGTGCCCTTA+GGG + chr1_1:77763779-77763798 None:intergenic 45.0%
GCTTCTTAACAAGTGCCCTT+AGG - chr1_1:77763899-77763918 Msa0045790:intron 45.0%
AACAAGTGCCCTTAGGGTTA+AGG - chr1_1:77763906-77763925 Msa0045790:intron 45.0%
ACAAGTGCCCTTAGGGTTAA+GGG - chr1_1:77763907-77763926 Msa0045790:intron 45.0%
ACAAGTGCCCTTAACCCTAA+GGG + chr1_1:77763917-77763936 None:intergenic 45.0%
AACAAGTGCCCTTAACCCTA+AGG + chr1_1:77763918-77763937 None:intergenic 45.0%
ATCTCGGGCCATTAGATATC+AGG - chr1_1:77764366-77764385 Msa0045790:intron 45.0%
TCTCGGGCCATTAGATATCA+GGG - chr1_1:77764367-77764386 Msa0045790:intron 45.0%
AGGGGTAACTAGTGAGAGAT+TGG - chr1_1:77764386-77764405 Msa0045790:intron 45.0%
GGGGTAACTAGTGAGAGATT+GGG - chr1_1:77764387-77764406 Msa0045790:intron 45.0%
AAACAGTGTGATGCTACAGC+AGG - chr1_1:77764693-77764712 Msa0045790:intron 45.0%
CATTCAGTATTGCAACCGAC+AGG + chr1_1:77765027-77765046 None:intergenic 45.0%
! CTGTCGGTTGCAATACTGAA+TGG - chr1_1:77765025-77765044 Msa0045790:intron 45.0%
GCACTGGAAACATAAGCACA+AGG + chr1_1:77765091-77765110 None:intergenic 45.0%
ACATAAGCTGAGCAAAGCAC+TGG + chr1_1:77765107-77765126 None:intergenic 45.0%
AAAATAAGACCCTGCACGGT+TGG + chr1_1:77765145-77765164 None:intergenic 45.0%
AAAGTTCGCGTGACTAAAGG+TGG - chr1_1:77765257-77765276 Msa0045790:CDS 45.0%
GTGACTAAAGGTGGTGAAAC+TGG - chr1_1:77765266-77765285 Msa0045790:CDS 45.0%
AGGTGGTGAAACTGGTGAAA+AGG - chr1_1:77765274-77765293 Msa0045790:CDS 45.0%
CGTCTGCCATTCCATTCATA+TGG + chr1_1:77765549-77765568 None:intergenic 45.0%
! AGGGACATGATTTGTGCCAA+AGG + chr1_1:77765615-77765634 None:intergenic 45.0%
GAGAGACGAAACGCAAGAAT+TGG + chr1_1:77765664-77765683 None:intergenic 45.0%
GGGTGTAGCGTGAACAAATT+TGG + chr1_1:77765816-77765835 None:intergenic 45.0%
!! TGGTTCAAATTTTCGGGGGA+TGG - chr1_1:77765937-77765956 Msa0045790:intron 45.0%
!! GGTTCAAATTTTCGGGGGAT+GGG - chr1_1:77765938-77765957 Msa0045790:intron 45.0%
!! GTTCAAATTTTCGGGGGATG+GGG - chr1_1:77765939-77765958 Msa0045790:intron 45.0%
!! TTCAAATTTTCGGGGGATGG+GGG - chr1_1:77765940-77765959 Msa0045790:intron 45.0%
GACACTCGTTATGAAACGGA+GGG - chr1_1:77766961-77766980 Msa0045790:intron 45.0%
! TGTTTTCACCCAAACTCCGT+AGG + chr1_1:77767089-77767108 None:intergenic 45.0%
ACGGAGTTTGGGTGAAAACA+CGG - chr1_1:77767089-77767108 Msa0045790:intron 45.0%
TCTGCTGAATCAGGTCTATC+GGG + chr1_1:77767703-77767722 None:intergenic 45.0%
! ACAGTCTTGATGATTGGGAC+AGG + chr1_1:77767790-77767809 None:intergenic 45.0%
! TATAAGCTCTCAGAGGGTGT+TGG - chr1_1:77767818-77767837 Msa0045790:intron 45.0%
CCCAACAAATTTCCCGTTGA+TGG - chr1_1:77767940-77767959 Msa0045790:intron 45.0%
AGCATCAGACAGACCATCAA+CGG + chr1_1:77767956-77767975 None:intergenic 45.0%
AGACTGAGAATATGTGGTGG+TGG + chr1_1:77768162-77768181 None:intergenic 45.0%
TGATGAATTGGAGAGACACG+AGG - chr1_1:77768286-77768305 Msa0045790:intron 45.0%
!! GATAATGGGTGGAAAATGGC+AGG - chr1_1:77768378-77768397 Msa0045790:intron 45.0%
! CTTACATGGGCACTTTTAGC+TGG - chr1_1:77768563-77768582 Msa0045790:CDS 45.0%
TGAATCCTCAGTATCTGCAC+TGG + chr1_1:77768804-77768823 None:intergenic 45.0%
! GTGGACTCTTTTGTAGCTGT+TGG - chr1_1:77769044-77769063 Msa0045790:intron 45.0%
CAGATATTGAGGGTCAGACA+TGG + chr1_1:77769122-77769141 None:intergenic 45.0%
TGCTTATCGGGTTCAAATCC+AGG - chr1_1:77769520-77769539 Msa0045790:intron 45.0%
GGGCTCTCTATTTCAAGAAC+TGG + chr1_1:77769621-77769640 None:intergenic 45.0%
GCTTGGCTAATTCAGCTTCA+TGG + chr1_1:77769791-77769810 None:intergenic 45.0%
GCCAAGCTTGAATCTGAGTT+TGG - chr1_1:77769804-77769823 Msa0045790:intron 45.0%
TGAAGCTTGCAAGATCAGAC+GGG - chr1_1:77770060-77770079 Msa0045790:CDS 45.0%
! TCTGTTTTACGGTTCCTTCC+AGG + chr1_1:77770282-77770301 None:intergenic 45.0%
!!! TATTTTTTTTTTTTTTTTTG+TGG - chr1_1:77758383-77758402 Msa0045790:CDS 5.0%
!!! TGAGGCGTTTTTCAGGCACT+GGG + chr1_1:77757861-77757880 None:intergenic 50.0%
!!! ATGAGGCGTTTTTCAGGCAC+TGG + chr1_1:77757862-77757881 None:intergenic 50.0%
!! ACGTCGATGAGGCGTTTTTC+AGG + chr1_1:77757868-77757887 None:intergenic 50.0%
AGAGGATGAAGACGTCGATG+AGG + chr1_1:77757879-77757898 None:intergenic 50.0%
GGATCTTAGCCACGATGACA+TGG + chr1_1:77758072-77758091 None:intergenic 50.0%
!! TTGACCGGCTTGTTGAACGA+CGG + chr1_1:77758165-77758184 None:intergenic 50.0%
!! GATTTTGGCGCCTTCAGCAA+CGG + chr1_1:77758189-77758208 None:intergenic 50.0%
! GCAAAATGGCTGGTCAAAGG+AGG + chr1_1:77759016-77759035 None:intergenic 50.0%
CAATGGGCATGCAAAATGGC+TGG + chr1_1:77759026-77759045 None:intergenic 50.0%
!! TCTTCAAAGTCAGGCACTGG+AGG - chr1_1:77759565-77759584 Msa0045790:intron 50.0%
!! CTTCAAAGTCAGGCACTGGA+GGG - chr1_1:77759566-77759585 Msa0045790:intron 50.0%
GCATAGACTAGACCTATGGG+TGG - chr1_1:77759697-77759716 Msa0045790:intron 50.0%
GGTGAACAAACACCACCCAT+AGG + chr1_1:77759712-77759731 None:intergenic 50.0%
CAGTGCATCTTGGTTCCTGT+GGG + chr1_1:77759748-77759767 None:intergenic 50.0%
ACAGTGCATCTTGGTTCCTG+TGG + chr1_1:77759749-77759768 None:intergenic 50.0%
CGTAGTGCTTCAAGAAGTCC+TGG - chr1_1:77759878-77759897 Msa0045790:intron 50.0%
CTTCCTGATTGTGTGGGAGA+GGG - chr1_1:77760062-77760081 Msa0045790:intron 50.0%
ATTCCCTCTCCCACACAATC+AGG + chr1_1:77760068-77760087 None:intergenic 50.0%
TGAAGCTCCAAACGAGGAAG+AGG - chr1_1:77760402-77760421 Msa0045790:intron 50.0%
AGGGAAACCTCTTCCTCGTT+TGG + chr1_1:77760412-77760431 None:intergenic 50.0%
TCCCTTCTCCTGGAGATGTT+TGG - chr1_1:77760427-77760446 Msa0045790:intron 50.0%
CCCAAACATCTCCAGGAGAA+GGG + chr1_1:77760431-77760450 None:intergenic 50.0%
CCCTTCTCCTGGAGATGTTT+GGG - chr1_1:77760428-77760447 Msa0045790:intron 50.0%
ACCCAAACATCTCCAGGAGA+AGG + chr1_1:77760432-77760451 None:intergenic 50.0%
AGACTCACCCAAACATCTCC+AGG + chr1_1:77760438-77760457 None:intergenic 50.0%
TTTGCACAACGTGCCATCAC+TGG - chr1_1:77761105-77761124 Msa0045790:intron 50.0%
TTGCACAACGTGCCATCACT+GGG - chr1_1:77761106-77761125 Msa0045790:intron 50.0%
CGGAGTTCACATTCCAAGAG+TGG - chr1_1:77761235-77761254 Msa0045790:intron 50.0%
CAACACAATCTGCCCACTCT+TGG + chr1_1:77761251-77761270 None:intergenic 50.0%
CATGGATCCGATTGGACAAG+AGG + chr1_1:77761811-77761830 None:intergenic 50.0%
GGAAACAGAAGCAACCCTAC+AGG - chr1_1:77762004-77762023 Msa0045790:intron 50.0%
CATTCAATGTGCTTCTGCCG+AGG - chr1_1:77762349-77762368 Msa0045790:intron 50.0%
TGTCAGAATGTTGGGGCAAC+GGG + chr1_1:77762481-77762500 None:intergenic 50.0%
AAGCAATGGAGACTCTCCTG+AGG - chr1_1:77762926-77762945 Msa0045790:intron 50.0%
TCCTGAGGTTCATGCCCAAA+AGG - chr1_1:77762941-77762960 Msa0045790:intron 50.0%
! ACCTTTTGGGCATGAACCTC+AGG + chr1_1:77762945-77762964 None:intergenic 50.0%
GAGCCTTAACAAGTGCCCTT+AGG + chr1_1:77763780-77763799 None:intergenic 50.0%
CTCGGGCCATTAGATATCAG+GGG - chr1_1:77764368-77764387 Msa0045790:intron 50.0%
GATTGGGAGTAATCGGACAC+TGG - chr1_1:77764403-77764422 Msa0045790:intron 50.0%
ACGGTGTATATCCGTGTCCA+TGG + chr1_1:77764672-77764691 None:intergenic 50.0%
TTGCCCACATTACGTGGGTA+TGG - chr1_1:77764806-77764825 Msa0045790:intron 50.0%
TGCCCACATTACGTGGGTAT+GGG - chr1_1:77764807-77764826 Msa0045790:intron 50.0%
CACCCATACCCACGTAATGT+GGG + chr1_1:77764812-77764831 None:intergenic 50.0%
TCACCCATACCCACGTAATG+TGG + chr1_1:77764813-77764832 None:intergenic 50.0%
!! TCCATTTTGATGGAGGAGGG+TGG - chr1_1:77764850-77764869 Msa0045790:intron 50.0%
ACCACCCTCCTCCATCAAAA+TGG + chr1_1:77764854-77764873 None:intergenic 50.0%
ACAGGCAGTATTGCCACAGA+TGG + chr1_1:77764979-77764998 None:intergenic 50.0%
TTCTAGTCAATCCGGCCTGT+CGG - chr1_1:77765009-77765028 Msa0045790:intron 50.0%
TTCACGCTACACCCATCACT+TGG - chr1_1:77765822-77765841 Msa0045790:intron 50.0%
TCACGCTACACCCATCACTT+GGG - chr1_1:77765823-77765842 Msa0045790:intron 50.0%
CGACACTCGTTATGAAACGG+AGG - chr1_1:77766960-77766979 Msa0045790:intron 50.0%
GAGTTTGGGTGAAAACACGG+TGG - chr1_1:77767092-77767111 Msa0045790:intron 50.0%
AAGCACGATTGTGGAACGTG+AGG - chr1_1:77767233-77767252 Msa0045790:intron 50.0%
AGCACGATTGTGGAACGTGA+GGG - chr1_1:77767234-77767253 Msa0045790:intron 50.0%
GGAAGAGAGAGACCAGTTTG+AGG - chr1_1:77767255-77767274 Msa0045790:intron 50.0%
!! TAGTCTTGGGTTGGGGTCAT+TGG + chr1_1:77767873-77767892 None:intergenic 50.0%
ATAGGAGGCAGCAAGATGAG+AGG + chr1_1:77767900-77767919 None:intergenic 50.0%
GCATCAGACAGACCATCAAC+GGG + chr1_1:77767955-77767974 None:intergenic 50.0%
AACGTGACTACAGTCCCAGT+TGG + chr1_1:77767987-77768006 None:intergenic 50.0%
! GGACAAGGCTTGGTTGTTGT+TGG + chr1_1:77768014-77768033 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG - chr1_1:77768022-77768041 Msa0045790:intron 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG - chr1_1:77768023-77768042 Msa0045790:intron 50.0%
TGTAGCCAACCCCACTTAGT+GGG + chr1_1:77768035-77768054 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG + chr1_1:77768036-77768055 None:intergenic 50.0%
!! ACTAAGTGGGGTTGGCTACA+TGG - chr1_1:77768035-77768054 Msa0045790:intron 50.0%
!! CTGAGAATATGTGGTGGTGG+TGG + chr1_1:77768159-77768178 None:intergenic 50.0%
GACAACCAGTGCAGATACTG+AGG - chr1_1:77768796-77768815 Msa0045790:intron 50.0%
GACTCACGACCAGTGAGAAA+AGG + chr1_1:77769371-77769390 None:intergenic 50.0%
CCAACTGAAGCAGAAGGTGA+AGG + chr1_1:77769693-77769712 None:intergenic 50.0%
CCTTCACCTTCTGCTTCAGT+TGG - chr1_1:77769690-77769709 Msa0045790:CDS 50.0%
TCACCTTCTGCTTCAGTTGG+AGG - chr1_1:77769693-77769712 Msa0045790:CDS 50.0%
GTACCTCCAACTGAAGCAGA+AGG + chr1_1:77769699-77769718 None:intergenic 50.0%
GCTAATATGCCATACGCTCC+TGG - chr1_1:77770261-77770280 Msa0045790:five_prime_UTR 50.0%
ATATGCCATACGCTCCTGGA+AGG - chr1_1:77770265-77770284 Msa0045790:five_prime_UTR 50.0%
!!! GAGGCGTTTTTCAGGCACTG+GGG + chr1_1:77757860-77757879 None:intergenic 55.0%
!! GACCTCGACGGCTTTGTTGA+CGG + chr1_1:77758096-77758115 None:intergenic 55.0%
GTCAACAAAGCCGTCGAGGT+CGG - chr1_1:77758095-77758114 Msa0045790:three_prime_UTR 55.0%
GTTCTTGTTGCCGACCTCGA+CGG + chr1_1:77758108-77758127 None:intergenic 55.0%
!! GGCTTGTTGAACGACGGTGT+CGG + chr1_1:77758159-77758178 None:intergenic 55.0%
GACACCGTCGTTCAACAAGC+CGG - chr1_1:77758158-77758177 Msa0045790:three_prime_UTR 55.0%
GAAGCTGCTATCTCGCATCG+AGG - chr1_1:77758463-77758482 Msa0045790:CDS 55.0%
GTCAAAGGAGGTCTGGCTGA+TGG + chr1_1:77759004-77759023 None:intergenic 55.0%
! ATGGCTGGTCAAAGGAGGTC+TGG + chr1_1:77759011-77759030 None:intergenic 55.0%
GCCGAAAGCTGAATTTCCGC+TGG - chr1_1:77759642-77759661 Msa0045790:CDS 55.0%
CCTGTGGGAGGGAAGAACTA+AGG + chr1_1:77759733-77759752 None:intergenic 55.0%
! CCTTAGTTCTTCCCTCCCAC+AGG - chr1_1:77759730-77759749 Msa0045790:intron 55.0%
GCATCTTGGTTCCTGTGGGA+GGG + chr1_1:77759744-77759763 None:intergenic 55.0%
TGCATCTTGGTTCCTGTGGG+AGG + chr1_1:77759745-77759764 None:intergenic 55.0%
! CTGTCTGCACCCTTTTTGCC+AGG + chr1_1:77759899-77759918 None:intergenic 55.0%
CCTCTCCCACACAATCAGGA+AGG + chr1_1:77760064-77760083 None:intergenic 55.0%
CCTTCCTGATTGTGTGGGAG+AGG - chr1_1:77760061-77760080 Msa0045790:intron 55.0%
GGAAGAGGTTTCCCTTCTCC+TGG - chr1_1:77760417-77760436 Msa0045790:intron 55.0%
! GTACAGGGGTTTGATGGCAG+AGG + chr1_1:77761556-77761575 None:intergenic 55.0%
ACTTGTTTGGGTGGAGGGTG+TGG - chr1_1:77761681-77761700 Msa0045790:intron 55.0%
CAACGGGTGTGAATGGAGAG+AGG + chr1_1:77762465-77762484 None:intergenic 55.0%
TGGTCCCTCCTTAAGACACC+TGG + chr1_1:77763375-77763394 None:intergenic 55.0%
CAGTATTGCAACCGACAGGC+CGG + chr1_1:77765023-77765042 None:intergenic 55.0%
AAACCAGGAACCAACCGTGC+AGG - chr1_1:77765132-77765151 Msa0045790:intron 55.0%
AACCAGGAACCAACCGTGCA+GGG - chr1_1:77765133-77765152 Msa0045790:intron 55.0%
CTGCTGCTCAAGCACGATTG+TGG - chr1_1:77767224-77767243 Msa0045790:intron 55.0%
!! CAGGTCTATCGGGTGGACTA+TGG + chr1_1:77767693-77767712 None:intergenic 55.0%
GCTGAATCAGGTCTATCGGG+TGG + chr1_1:77767700-77767719 None:intergenic 55.0%
!! GCTCTCAGAGGGTGTTGGAA+AGG - chr1_1:77767823-77767842 Msa0045790:intron 55.0%
! TGGGTTGGGGTCATTGGCAA+TGG + chr1_1:77767867-77767886 None:intergenic 55.0%
CCACTTAGTGGGACAAGGCT+TGG + chr1_1:77768024-77768043 None:intergenic 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG - chr1_1:77768021-77768040 Msa0045790:intron 55.0%
CAACCCCACTTAGTGGGACA+AGG + chr1_1:77768029-77768048 None:intergenic 55.0%
CTTGTCCCACTAAGTGGGGT+TGG - chr1_1:77768027-77768046 Msa0045790:intron 55.0%
!! CTCGACGGCTTTGTTGACGG+CGG + chr1_1:77758093-77758112 None:intergenic 60.0%
GCCTTCAGCAACGGCTTGAC+CGG + chr1_1:77758180-77758199 None:intergenic 60.0%
TTGTCGGGAGCTTCGGCTGA+AGG - chr1_1:77758544-77758563 Msa0045790:CDS 60.0%
! AGGGGTTTGATGGCAGAGGC+GGG + chr1_1:77761552-77761571 None:intergenic 60.0%
! CAGGGGTTTGATGGCAGAGG+CGG + chr1_1:77761553-77761572 None:intergenic 60.0%
!! GGTTCGGTGCCGTCCATTCA+GGG - chr1_1:77761763-77761782 Msa0045790:intron 60.0%
GTTGGGGCAACGGGTGTGAA+TGG + chr1_1:77762472-77762491 None:intergenic 60.0%
! CGGTTCCTTCCAGGAGCGTA+TGG + chr1_1:77770273-77770292 None:intergenic 60.0%
CGCCGTCAACAAAGCCGTCG+AGG - chr1_1:77758091-77758110 Msa0045790:three_prime_UTR 65.0%
GCCGGTCAAGCCGTTGCTGA+AGG - chr1_1:77758176-77758195 Msa0045790:three_prime_UTR 65.0%
! GGTGGAGGGTGTGGCAGTGT+GGG - chr1_1:77761690-77761709 Msa0045790:intron 65.0%
! GTGGAGGGTGTGGCAGTGTG+GGG - chr1_1:77761691-77761710 Msa0045790:intron 65.0%
! TGGAGGGTGTGGCAGTGTGG+GGG - chr1_1:77761692-77761711 Msa0045790:intron 65.0%
!! GGGTTCGGTGCCGTCCATTC+AGG - chr1_1:77761762-77761781 Msa0045790:intron 65.0%
! GACCCTGCACGGTTGGTTCC+TGG + chr1_1:77765138-77765157 None:intergenic 65.0%
! GGGTGGAGGGTGTGGCAGTG+TGG - chr1_1:77761689-77761708 Msa0045790:intron 70.0%
AGGGTGTGGCAGTGTGGGGG+TGG - chr1_1:77761695-77761714 Msa0045790:intron 70.0%
GGGTGTGGCAGTGTGGGGGT+GGG - chr1_1:77761696-77761715 Msa0045790:intron 70.0%
GGTGTGGCAGTGTGGGGGTG+GGG - chr1_1:77761697-77761716 Msa0045790:intron 70.0%
GTGGCAGTGTGGGGGTGGGG+TGG - chr1_1:77761700-77761719 Msa0045790:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 77757810 77770357 77757810 ID=Msa0045790;Name=Msa0045790
chr1_1 mRNA 77757810 77770357 77757810 ID=Msa0045790-mRNA-1;Parent=Msa0045790;Name=Msa0045790-mRNA-1;_AED=0.11;_eAED=0.11;_QI=261|1|1|1|1|1|18|437|682
chr1_1 exon 77757810 77758625 77757810 ID=Msa0045790-mRNA-1:exon:26643;Parent=Msa0045790-mRNA-1
chr1_1 exon 77758903 77758973 77758903 ID=Msa0045790-mRNA-1:exon:26642;Parent=Msa0045790-mRNA-1
chr1_1 exon 77759287 77759380 77759287 ID=Msa0045790-mRNA-1:exon:26641;Parent=Msa0045790-mRNA-1
chr1_1 exon 77759630 77759697 77759630 ID=Msa0045790-mRNA-1:exon:26640;Parent=Msa0045790-mRNA-1
chr1_1 exon 77759815 77759881 77759815 ID=Msa0045790-mRNA-1:exon:26639;Parent=Msa0045790-mRNA-1
chr1_1 exon 77760611 77760741 77760611 ID=Msa0045790-mRNA-1:exon:26638;Parent=Msa0045790-mRNA-1
chr1_1 exon 77760852 77760959 77760852 ID=Msa0045790-mRNA-1:exon:26637;Parent=Msa0045790-mRNA-1
chr1_1 exon 77762039 77762104 77762039 ID=Msa0045790-mRNA-1:exon:26636;Parent=Msa0045790-mRNA-1
chr1_1 exon 77762866 77762932 77762866 ID=Msa0045790-mRNA-1:exon:26635;Parent=Msa0045790-mRNA-1
chr1_1 exon 77764480 77764556 77764480 ID=Msa0045790-mRNA-1:exon:26634;Parent=Msa0045790-mRNA-1
chr1_1 exon 77765205 77765315 77765205 ID=Msa0045790-mRNA-1:exon:26633;Parent=Msa0045790-mRNA-1
chr1_1 exon 77766142 77766256 77766142 ID=Msa0045790-mRNA-1:exon:26632;Parent=Msa0045790-mRNA-1
chr1_1 exon 77767013 77767086 77767013 ID=Msa0045790-mRNA-1:exon:26631;Parent=Msa0045790-mRNA-1
chr1_1 exon 77767401 77767497 77767401 ID=Msa0045790-mRNA-1:exon:26630;Parent=Msa0045790-mRNA-1
chr1_1 exon 77767718 77767770 77767718 ID=Msa0045790-mRNA-1:exon:26629;Parent=Msa0045790-mRNA-1
chr1_1 exon 77768563 77768658 77768563 ID=Msa0045790-mRNA-1:exon:26628;Parent=Msa0045790-mRNA-1
chr1_1 exon 77769531 77769752 77769531 ID=Msa0045790-mRNA-1:exon:26627;Parent=Msa0045790-mRNA-1
chr1_1 exon 77769944 77770357 77769944 ID=Msa0045790-mRNA-1:exon:26626;Parent=Msa0045790-mRNA-1
chr1_1 five_prime_UTR 77770097 77770357 77770097 ID=Msa0045790-mRNA-1:five_prime_utr;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77769944 77770096 77769944 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77769531 77769752 77769531 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77768563 77768658 77768563 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77767718 77767770 77767718 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77767401 77767497 77767401 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77767013 77767086 77767013 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77766142 77766256 77766142 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77765205 77765315 77765205 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77764480 77764556 77764480 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77762866 77762932 77762866 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77762039 77762104 77762039 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77760852 77760959 77760852 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77760611 77760741 77760611 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77759815 77759881 77759815 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77759630 77759697 77759630 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77759287 77759380 77759287 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77758903 77758973 77758903 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 CDS 77758247 77758625 77758247 ID=Msa0045790-mRNA-1:cds;Parent=Msa0045790-mRNA-1
chr1_1 three_prime_UTR 77757810 77758246 77757810 ID=Msa0045790-mRNA-1:three_prime_utr;Parent=Msa0045790-mRNA-1
Gene Sequence

>Msa0045790

ATGTCATCGTGGCTAAGATCCGCCGTCAACAAAGCCGTCGAGGTCGGCAACAAGAACAACCTCACTAACACCGTCAAAAAATATGCCGACACCGTCGTTCAACAAGCCGGTCAAGCCGTTGCTGAAGGCGCCAAAATCCTTCATGATCGCATTTCAGCTAGAAACTATAGAAGTGTTGCACAGACAGTCAAAAGATTGGAAGAAGCTGCTATCTCGCATCGAGGACCTGAGAGAGTTCAGTTGCTTAGGAGATGGCTTGTTGTTCTTAAAGAGATTGAGAATTTGTCGGGAGCTTCGGCTGAAGGTAAAGAGAAGACTCTCGAGCAGCACCTTGCTGTTGAAGATATTAAGGAGAATCCACAGAGACCTTCTTTGGTTCTTTATTATGATTCTGATATTGGAGGAGAACCACTAAATTTTCGCGATGTTTTTCTTCAAAGTCAGGCACTGGAGGGTATAACACTATCAATGATTATTGAAGCTCCAAACGAGGAAGAGGTTTCCCTTCTCCTGGAGATGTTTGGGCTTTGTCTTACTGGGAGAAAAGAAGTTCATAATGCCATAGTAAGCAGCTTACAAGATTTGGCAACAGCGTTTTCAAGCTACCAAGATGAAGTACTGGTGAAGCGAGAGGAATTGCTTCAGTTTGCACAACGTGCCATCACTGGGTTGAAAATCAATTCTGATCTCGCAAGAATAGATGCTGAAGCCTCTAGTCTTAGGAAGAAGCTCAGTGAGATAACAACTTCACAGGGGGTTGTGAATAAAATTGATTATAAAGCTGCTGAGGAAACAGAAGCAACCCTACAGGCTTTAAAAGTTGCACTCGGACAGATTAGAATTTGTTCCAGACTGGAAGGATTATTGCTGAAGAAAAAAAATATAAGCAATGGAGACTCTCCTGAGGTTCATGCCCAAAAGGTTGACAAGCTGAAGGTCTTAACGGAATCTCTTGTTAACTCTGCTGCAAAAGCTGAAAAGCGTATTTCTGACAACAGACAACAAAAAGAGGAGGCATTAAAAGTTCGCGTGACTAAAGGTGGTGAAACTGGTGAAAAGGAGAAGGAACTGACAGCTGAGATATCTGAACTCCAACAGAAAAAAGATAATCTTGAAGCTGAACTGAAAAAGGTTAATACTTCTTTGGCTGCTGCTCAAGCACGATTGTGGAACGTGAGGGAAGAGAGAGACCAGTTTGAGGAAGCAAACAATCAGATAGTTGAGCATCTGAAGATAAAGGAAGATGAAATTACGAAATCAATTAGCTCATGTCGAGTAGAATCAGATGTCATCAAAACGTGGATCAACTTTCTGGAAGATACTTGGGTTCTCCAGCAGTCAAATACAGAAATTTATGAGAAGCAGGTCAGTGATGAATTGGAGAGACACGAGGACTATTTTGTGAACTTGGCCATTCAGCTTCTTACTACTTACCAGAAAGAGTTGGAGCCTTGTATTAACCATATTGGAACATTTGTTGTGAACCTCAAGAATTTGACTCAGAGGTTAGAAATGACAACCAGTGCAGATACTGAGGATTCACAAGTATTAAGTCCAAGGAGAAATCTTGAGGAAGAATATTTGACCTATGAAGCCAAGATTATTACCACTTTCAGTGTAGTGGATAACATGAAACAGCAGTTTTATGCTCAACAGGGAAATATTTCCAGGAAAGATGAAGAGAGAGTTAAAGAGCTGTTTGATGCCATTGAAAAGTTACGAACTCATTTTGAGGCTATAGAGAGGCCAGTTCTTGAAATAGAGAGCCCACCTGTGAAGACTGAAACATTACCTTCTGAGAAAAAGTCAGATGGCACACCTTCACCTTCTGCTTCAGTTGGAGGTACCGAGTTTTCAAAGACAGAGACAGGTGAACAGCCAAAATCACCTTCACTCAAATCAGATCAGGTATTGGACCATGAAGCTGAATTAGCCAAGCTTGAATCTGAGTTTGGAAAGGTTAGTACTCAAGATTACTCAACAGAGGAAATTAATGATTGGGAATTTGATGAGCTTGAAAAAGAATTTGTATCTGGTAGCAACAAGTGA

Protein sequence

>Msa0045790

MSSWLRSAVNKAVEVGNKNNLTNTVKKYADTVVQQAGQAVAEGAKILHDRISARNYRSVAQTVKRLEEAAISHRGPERVQLLRRWLVVLKEIENLSGASAEGKEKTLEQHLAVEDIKENPQRPSLVLYYDSDIGGEPLNFRDVFLQSQALEGITLSMIIEAPNEEEVSLLLEMFGLCLTGRKEVHNAIVSSLQDLATAFSSYQDEVLVKREELLQFAQRAITGLKINSDLARIDAEASSLRKKLSEITTSQGVVNKIDYKAAEETEATLQALKVALGQIRICSRLEGLLLKKKNISNGDSPEVHAQKVDKLKVLTESLVNSAAKAEKRISDNRQQKEEALKVRVTKGGETGEKEKELTAEISELQQKKDNLEAELKKVNTSLAAAQARLWNVREERDQFEEANNQIVEHLKIKEDEITKSISSCRVESDVIKTWINFLEDTWVLQQSNTEIYEKQVSDELERHEDYFVNLAIQLLTTYQKELEPCINHIGTFVVNLKNLTQRLEMTTSADTEDSQVLSPRRNLEEEYLTYEAKIITTFSVVDNMKQQFYAQQGNISRKDEERVKELFDAIEKLRTHFEAIERPVLEIESPPVKTETLPSEKKSDGTPSPSASVGGTEFSKTETGEQPKSPSLKSDQVLDHEAELAKLESEFGKVSTQDYSTEEINDWEFDELEKEFVSGSNK*