AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0131900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131900 MtrunA17_Chr1g0193391 97.213 610 13 1 1 610 1 606 0.0 1220
Msa0131900 MtrunA17_Chr7g0271221 81.771 576 102 3 1 575 1 574 0.0 975
Msa0131900 MtrunA17_Chr4g0069581 59.160 524 210 2 35 555 4 526 0.0 598
Msa0131900 MtrunA17_Chr3g0133341 47.461 571 263 8 11 564 10 560 0.0 540
Msa0131900 MtrunA17_Chr2g0284701 43.927 601 288 12 3 560 8 602 4.03e-165 484
Msa0131900 MtrunA17_Chr8g0379971 42.808 584 284 10 14 548 11 593 3.34e-148 441
Msa0131900 MtrunA17_Chr8g0379991 44.107 560 256 9 45 548 8 566 2.75e-142 425
Msa0131900 MtrunA17_Chr5g0415961 40.575 557 296 9 17 546 24 572 2.69e-140 420
Msa0131900 MtrunA17_Chr2g0276751 39.138 557 317 9 2 546 17 563 3.28e-140 420
Msa0131900 MtrunA17_Chr8g0362711 40.323 558 295 7 17 546 24 571 1.69e-136 410
Msa0131900 MtrunA17_Chr3g0142101 37.843 547 326 7 17 555 35 575 3.78e-128 389
Msa0131900 MtrunA17_Chr3g0142091 38.559 555 324 8 17 559 26 575 8.46e-126 382
Msa0131900 MtrunA17_Chr4g0005901 37.615 545 320 9 17 546 32 571 6.71e-121 370
Msa0131900 MtrunA17_Chr7g0241741 36.679 548 331 6 17 551 22 566 1.87e-120 369
Msa0131900 MtrunA17_Chr5g0422881 37.522 573 327 13 17 564 20 586 2.23e-116 358
Msa0131900 MtrunA17_Chr7g0214731 36.577 555 326 8 19 549 63 615 4.42e-116 359
Msa0131900 MtrunA17_Chr3g0104011 35.714 546 331 8 17 546 22 563 5.46e-116 357
Msa0131900 MtrunA17_Chr7g0240381 35.860 541 327 8 17 547 29 559 9.24e-116 357
Msa0131900 MtrunA17_Chr8g0375291 35.326 552 336 7 2 537 27 573 2.01e-115 356
Msa0131900 MtrunA17_Chr8g0375311 34.046 561 349 9 2 546 27 582 1.32e-113 351
Msa0131900 MtrunA17_Chr5g0399071 36.572 566 323 12 17 556 25 580 2.76e-112 348
Msa0131900 MtrunA17_Chr4g0008651 36.197 547 331 9 17 551 34 574 5.48e-112 347
Msa0131900 MtrunA17_Chr8g0375361 34.225 561 346 8 2 546 28 581 4.28e-111 345
Msa0131900 MtrunA17_Chr7g0261811 34.441 572 344 9 3 554 15 575 3.34e-110 343
Msa0131900 MtrunA17_Chr5g0399061 36.155 567 326 14 17 557 27 583 6.56e-110 342
Msa0131900 MtrunA17_Chr3g0112671 34.249 546 343 8 9 547 25 561 4.99e-109 339
Msa0131900 MtrunA17_Chr7g0261881 32.517 572 355 9 3 554 15 575 1.40e-107 336
Msa0131900 MtrunA17_Chr7g0261791 33.217 575 352 9 3 556 17 580 3.61e-105 330
Msa0131900 MtrunA17_Chr4g0056431 36.427 571 330 11 17 563 25 586 1.02e-104 328
Msa0131900 MtrunA17_Chr7g0261771 33.275 571 348 11 3 552 19 577 1.54e-104 328
Msa0131900 MtrunA17_Chr5g0439381 35.548 557 335 9 17 561 28 572 1.98e-104 327
Msa0131900 MtrunA17_Chr8g0375321 32.740 562 357 8 2 547 24 580 6.36e-104 326
Msa0131900 MtrunA17_Chr3g0114501 35.159 566 341 10 3 551 10 566 1.87e-103 325
Msa0131900 MtrunA17_Chr8g0375341 32.442 561 358 7 2 546 27 582 5.82e-103 323
Msa0131900 MtrunA17_Chr1g0166791 31.504 565 366 9 3 552 12 570 1.14e-102 323
Msa0131900 MtrunA17_Chr1g0213711 33.702 543 337 11 17 544 21 555 3.24e-102 322
Msa0131900 MtrunA17_Chr1g0187241 31.379 580 371 10 3 563 14 585 4.66e-102 322
Msa0131900 MtrunA17_Chr8g0375351 32.258 558 357 7 3 544 28 580 7.18e-102 321
Msa0131900 MtrunA17_Chr3g0112611 33.276 577 352 9 9 559 24 593 1.16e-100 318
Msa0131900 MtrunA17_Chr8g0375331 31.903 536 344 7 2 521 11 541 3.39e-100 316
Msa0131900 MtrunA17_Chr7g0255621 32.558 602 363 15 4 577 12 598 1.52e-98 313
Msa0131900 MtrunA17_Chr4g0063591 36.697 545 323 9 17 546 22 559 2.07e-98 311
Msa0131900 MtrunA17_Chr7g0261851 32.925 571 358 8 3 556 16 578 2.24e-98 312
Msa0131900 MtrunA17_Chr1g0166711 32.522 575 364 10 3 560 13 580 1.02e-97 310
Msa0131900 MtrunA17_Chr7g0255611 32.155 594 359 16 1 561 9 591 6.58e-97 308
Msa0131900 MtrunA17_Chr5g0400371 32.740 562 353 9 3 544 100 656 2.71e-96 309
Msa0131900 MtrunA17_Chr7g0217461 31.952 579 368 8 3 560 12 585 7.50e-96 305
Msa0131900 MtrunA17_Chr7g0214461 32.902 541 342 10 18 544 79 612 9.26e-95 303
Msa0131900 MtrunA17_Chr7g0255601 31.220 631 374 16 1 608 13 606 1.24e-93 300
Msa0131900 MtrunA17_Chr4g0054891 31.597 576 361 10 3 553 98 665 3.35e-93 300
Msa0131900 MtrunA17_Chr4g0059971 33.333 549 339 10 22 546 39 584 1.93e-92 296
Msa0131900 MtrunA17_Chr7g0261661 33.925 507 296 9 105 591 1 488 2.25e-92 293
Msa0131900 MtrunA17_Chr5g0415791 33.219 584 360 12 17 576 29 606 1.21e-91 295
Msa0131900 MtrunA17_Chr7g0218851 32.044 543 346 11 18 544 47 582 2.18e-91 294
Msa0131900 MtrunA17_Chr1g0166771 31.693 508 333 7 31 529 5 507 4.64e-90 289
Msa0131900 MtrunA17_Chr1g0166741 30.616 552 369 7 17 559 27 573 7.08e-90 289
Msa0131900 MtrunA17_Chr4g0011471 33.395 539 335 9 26 544 23 557 1.49e-89 288
Msa0131900 MtrunA17_Chr4g0059991 31.655 556 350 11 22 551 27 578 3.51e-88 285
Msa0131900 MtrunA17_Chr8g0353031 29.965 574 360 10 1 551 1 555 3.95e-85 276
Msa0131900 MtrunA17_Chr4g0014781 31.618 544 345 10 17 550 29 555 7.40e-84 273
Msa0131900 MtrunA17_Chr4g0059981 31.634 569 356 12 22 564 36 597 8.59e-84 274
Msa0131900 MtrunA17_Chr4g0014791 31.655 556 349 10 3 548 17 551 2.15e-83 271
Msa0131900 MtrunA17_Chr4g0014871 31.115 556 355 12 3 548 18 555 2.84e-83 271
Msa0131900 MtrunA17_Chr4g0014841 30.396 556 356 11 3 548 17 551 4.89e-82 268
Msa0131900 MtrunA17_Chr1g0166731 33.839 461 285 8 107 552 12 467 1.68e-81 264
Msa0131900 MtrunA17_Chr4g0014801 31.004 558 356 11 3 550 17 555 3.64e-81 266
Msa0131900 MtrunA17_Chr3g0077151 31.532 555 342 13 3 546 16 543 5.63e-81 265
Msa0131900 MtrunA17_Chr4g0060071 46.595 279 136 4 279 551 32 303 6.39e-81 257
Msa0131900 MtrunA17_Chr4g0060001 30.508 590 376 12 18 586 30 606 2.95e-80 265
Msa0131900 MtrunA17_Chr8g0390331 30.195 563 368 11 8 552 6 561 1.16e-79 262
Msa0131900 MtrunA17_Chr8g0362801 34.194 465 279 10 105 546 1 461 7.10e-79 257
Msa0131900 MtrunA17_Chr4g0011041 29.286 560 374 9 3 544 24 579 2.27e-78 259
Msa0131900 MtrunA17_Chr2g0331481 28.459 636 415 13 3 607 11 637 4.35e-77 257
Msa0131900 MtrunA17_Chr2g0331471 28.365 624 407 13 15 607 86 700 5.25e-77 258
Msa0131900 MtrunA17_Chr3g0082631 34.521 449 263 9 135 558 30 472 1.11e-76 251
Msa0131900 MtrunA17_Chr7g0234381 35.730 445 252 8 104 543 3 418 3.40e-76 248
Msa0131900 MtrunA17_Chr7g0240271 27.757 544 370 10 17 540 24 564 6.95e-76 253
Msa0131900 MtrunA17_Chr7g0234181 35.973 442 249 9 107 543 1 413 7.34e-76 248
Msa0131900 MtrunA17_Chr4g0003761 28.191 564 375 14 19 561 32 586 2.61e-75 251
Msa0131900 MtrunA17_Chr8g0362781 28.164 561 365 10 17 547 30 582 4.61e-75 250
Msa0131900 MtrunA17_Chr7g0234151 34.978 446 254 10 104 543 3 418 1.02e-73 242
Msa0131900 MtrunA17_Chr2g0331511 29.617 574 369 12 15 560 19 585 1.80e-73 247
Msa0131900 MtrunA17_Chr4g0014861 33.882 425 262 9 134 548 15 430 4.08e-73 241
Msa0131900 MtrunA17_Chr1g0157601 29.130 563 366 15 3 543 2 553 2.78e-72 243
Msa0131900 MtrunA17_Chr1g0147631 29.661 590 357 15 17 582 25 580 4.27e-72 243
Msa0131900 MtrunA17_Chr1g0157611 29.688 576 367 15 6 556 5 567 1.17e-71 241
Msa0131900 MtrunA17_Chr7g0240281 29.038 551 362 11 17 543 24 569 4.69e-70 237
Msa0131900 MtrunA17_Chr1g0177591 29.630 540 351 14 15 542 40 562 1.71e-68 233
Msa0131900 MtrunA17_Chr7g0261751 28.842 475 280 8 3 427 19 485 4.10e-68 230
Msa0131900 MtrunA17_Chr7g0235521 29.067 461 304 9 108 549 4 460 1.82e-66 224
Msa0131900 MtrunA17_Chr7g0240131 29.067 461 304 9 108 549 4 460 8.56e-66 223
Msa0131900 MtrunA17_Chr7g0240181 29.067 461 304 9 108 549 4 460 1.13e-65 223
Msa0131900 MtrunA17_Chr7g0240211 29.067 461 304 9 108 549 4 460 1.95e-65 222
Msa0131900 MtrunA17_Chr2g0331521 26.712 584 389 17 17 577 22 589 6.32e-63 218
Msa0131900 MtrunA17_Chr2g0331461 28.317 618 395 16 3 588 11 612 2.16e-62 218
Msa0131900 MtrunA17_Chr3g0142121 41.219 279 154 5 284 561 11 280 3.02e-60 202
Msa0131900 MtrunA17_Chr1g0157621 26.978 556 373 14 35 569 1 544 1.00e-58 206
Msa0131900 MtrunA17_Chr7g0240151 27.876 452 287 9 108 540 4 435 2.38e-58 202
Msa0131900 MtrunA17_Chr1g0177611 31.667 420 263 12 135 542 26 433 3.12e-58 202
Msa0131900 MtrunA17_Chr3g0112631 36.727 275 160 5 283 547 3 273 1.50e-56 192
Msa0131900 MtrunA17_Chr5g0415841 29.122 467 300 10 105 547 1 460 2.91e-56 197
Msa0131900 MtrunA17_Chr1g0177631 31.579 418 266 11 135 542 26 433 3.13e-56 196
Msa0131900 MtrunA17_Chr7g0261731 30.814 344 217 5 3 333 19 354 1.22e-55 192
Msa0131900 MtrunA17_Chr3g0142111 34.397 282 178 3 17 291 46 327 2.84e-54 188
Msa0131900 MtrunA17_Chr2g0326211 25.841 565 372 14 4 547 10 548 2.88e-53 191
Msa0131900 MtrunA17_Chr2g0325951 26.512 562 372 12 4 547 10 548 1.37e-52 189
Msa0131900 MtrunA17_Chr6g0451841 26.834 559 363 11 17 551 5 541 2.03e-51 186
Msa0131900 MtrunA17_Chr2g0325961 25.962 520 349 11 46 547 48 549 1.51e-50 183
Msa0131900 MtrunA17_Chr7g0261721 40.394 203 110 5 353 548 5 203 8.55e-37 137
Msa0131900 MtrunA17_Chr1g0147591 32.308 195 119 4 142 326 9 200 1.57e-26 107
Msa0131900 MtrunA17_Chr3g0112651 30.653 199 131 4 91 284 7 203 2.34e-25 104
Msa0131900 MtrunA17_Chr7g0261831 37.500 152 86 4 242 387 1 149 7.62e-25 102
Msa0131900 MtrunA17_Chr4g0060061 38.983 118 72 0 128 245 11 128 7.66e-23 94.7
Msa0131900 MtrunA17_Chr4g0060051 36.264 91 56 1 11 101 18 106 1.89e-15 73.2
Msa0131900 MtrunA17_Chr2g0326221 26.222 225 139 6 323 546 25 223 2.44e-15 75.9
Msa0131900 MtrunA17_Chr7g0234371 43.210 81 43 2 27 104 1 81 1.08e-12 63.9
Msa0131900 MtrunA17_Chr7g0234141 43.210 81 43 2 27 104 1 81 1.08e-12 63.9
Msa0131900 MtrunA17_Chr7g0234171 46.774 62 33 0 43 104 16 77 2.41e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131900 AT1G59740.1 41.519 566 309 11 5 553 23 583 7.03e-146 435
Msa0131900 AT1G69850.1 40.070 569 302 8 17 552 23 585 9.81e-142 424
Msa0131900 AT1G33440.1 41.155 554 313 7 19 563 38 587 3.26e-138 416
Msa0131900 AT1G27040.2 39.599 548 310 6 17 550 21 561 3.39e-134 404
Msa0131900 AT1G27040.1 39.599 548 310 6 17 550 25 565 3.71e-134 404
Msa0131900 AT1G27040.3 40.189 530 296 6 35 550 11 533 1.13e-130 394
Msa0131900 AT5G62730.1 37.300 563 295 7 17 549 54 588 1.48e-124 380
Msa0131900 AT5G62730.2 37.477 555 289 7 25 549 3 529 4.47e-123 374
Msa0131900 AT3G25280.1 39.394 528 290 10 19 543 21 521 1.56e-121 370
Msa0131900 AT3G54140.1 35.963 545 331 7 17 546 22 563 9.34e-121 370
Msa0131900 AT3G54140.2 35.963 545 331 7 17 546 22 563 9.34e-121 370
Msa0131900 AT5G01180.2 35.413 545 333 7 17 546 23 563 3.85e-118 363
Msa0131900 AT5G01180.3 35.413 545 333 7 17 546 23 563 3.85e-118 363
Msa0131900 AT5G01180.1 35.413 545 333 7 17 546 23 563 3.85e-118 363
Msa0131900 AT1G62200.1 36.654 532 313 7 17 532 50 573 2.66e-114 353
Msa0131900 AT3G25260.1 36.312 526 303 10 19 543 21 515 8.95e-114 350
Msa0131900 AT2G02040.1 34.909 550 339 7 17 550 39 585 9.80e-114 352
Msa0131900 AT5G13400.1 37.238 572 332 11 2 550 48 615 1.16e-113 353
Msa0131900 AT2G37900.1 35.250 539 334 7 17 547 36 567 7.34e-112 347
Msa0131900 AT1G62200.2 34.938 561 312 8 17 532 50 602 1.26e-108 340
Msa0131900 AT1G62200.3 34.938 561 312 8 17 532 64 616 2.18e-108 340
Msa0131900 AT1G68570.1 37.589 564 324 12 18 558 22 580 2.27e-106 333
Msa0131900 AT2G26690.1 36.445 557 332 10 17 559 22 570 3.15e-106 332
Msa0131900 AT2G26690.2 37.248 545 317 11 29 559 4 537 2.08e-105 329
Msa0131900 AT2G37900.2 36.585 492 297 7 71 554 11 495 3.24e-105 327
Msa0131900 AT1G68570.2 37.591 548 317 11 31 558 8 550 1.80e-104 327
Msa0131900 AT1G12110.1 34.321 574 348 9 17 570 25 589 1.82e-104 328
Msa0131900 AT2G26690.3 37.618 529 308 10 45 559 5 525 2.70e-104 326
Msa0131900 AT3G53960.1 33.394 548 346 8 14 547 32 574 7.42e-104 327
Msa0131900 AT2G40460.1 34.276 601 351 13 3 587 10 582 2.38e-102 322
Msa0131900 AT1G69870.1 34.266 572 344 10 17 560 49 616 3.05e-102 323
Msa0131900 AT3G21670.1 35.531 546 326 8 17 548 27 560 1.30e-101 321
Msa0131900 AT3G54450.1 32.801 564 340 10 17 559 10 555 1.32e-100 317
Msa0131900 AT4G21680.1 34.266 572 345 11 3 550 14 578 3.56e-99 314
Msa0131900 AT2G02020.1 31.657 537 325 5 17 545 40 542 1.01e-97 309
Msa0131900 AT1G32450.1 30.988 597 373 11 1 564 12 602 3.58e-95 305
Msa0131900 AT5G46040.1 30.329 577 375 10 1 557 6 575 7.59e-91 292
Msa0131900 AT1G18880.1 32.014 581 361 13 3 558 7 578 1.31e-88 286
Msa0131900 AT1G72140.1 32.541 547 328 8 17 547 32 553 3.41e-87 282
Msa0131900 AT5G62680.1 31.404 570 353 13 22 561 46 607 4.71e-87 283
Msa0131900 AT5G46050.1 30.427 562 366 10 20 564 28 581 1.58e-86 281
Msa0131900 AT5G19640.1 30.474 548 349 12 20 552 60 590 2.12e-85 279
Msa0131900 AT1G72130.1 30.370 540 345 8 17 550 23 537 8.29e-84 273
Msa0131900 AT1G27080.1 32.131 582 360 13 17 580 12 576 5.69e-83 271
Msa0131900 AT5G28470.2 31.588 554 353 10 17 551 15 561 2.96e-81 266
Msa0131900 AT1G52190.1 29.932 588 377 13 17 576 19 599 9.49e-81 266
Msa0131900 AT1G22570.1 31.429 525 329 10 17 524 28 538 2.40e-80 264
Msa0131900 AT3G47960.1 31.261 563 343 16 22 552 64 614 4.63e-79 263
Msa0131900 AT5G28470.1 31.408 554 352 11 17 551 15 559 2.17e-78 259
Msa0131900 AT1G22540.1 32.072 555 342 11 11 551 24 557 3.38e-78 258
Msa0131900 AT1G27080.2 32.234 546 336 12 48 575 1 530 3.96e-78 257
Msa0131900 AT1G22550.1 30.672 551 348 10 17 549 28 562 2.23e-77 256
Msa0131900 AT1G69860.1 31.194 561 358 12 3 547 2 550 2.24e-77 256
Msa0131900 AT2G02020.2 27.933 537 324 6 17 545 40 521 2.47e-77 255
Msa0131900 AT1G72125.1 31.618 544 342 12 21 549 31 559 1.05e-76 254
Msa0131900 AT1G22570.2 32.056 496 306 10 46 524 20 501 2.09e-76 253
Msa0131900 AT1G72120.1 30.826 545 349 9 17 549 27 555 1.01e-74 249
Msa0131900 AT5G46050.2 31.656 477 301 10 105 564 1 469 4.16e-74 245
Msa0131900 AT1G72130.2 33.412 422 256 7 135 550 17 419 1.26e-73 242
Msa0131900 AT1G72130.3 33.412 422 256 7 135 550 17 419 1.26e-73 242
Msa0131900 AT3G16180.1 28.924 567 362 13 5 542 9 563 2.61e-73 246
Msa0131900 AT3G45660.1 28.596 577 359 17 8 560 10 557 1.78e-67 230
Msa0131900 AT3G45660.3 28.596 577 359 17 8 560 10 557 1.78e-67 230
Msa0131900 AT3G45660.2 28.885 547 339 16 35 560 61 578 6.74e-67 229
Msa0131900 AT3G45650.1 28.731 536 339 14 44 560 47 558 7.68e-65 223
Msa0131900 AT3G45680.1 28.671 572 357 17 2 552 7 548 1.61e-64 222
Msa0131900 AT3G45720.1 29.331 508 324 14 60 552 59 546 1.70e-62 216
Msa0131900 AT3G45700.1 28.445 566 356 16 2 552 7 538 1.56e-61 214
Msa0131900 AT3G45710.1 27.993 568 368 15 2 552 7 550 5.13e-61 213
Msa0131900 AT3G45650.2 27.402 562 339 15 44 560 47 584 1.52e-59 209
Msa0131900 AT5G14940.1 27.936 562 360 15 17 552 5 547 9.80e-58 203
Msa0131900 AT3G45690.1 25.540 556 340 17 19 560 18 513 7.65e-56 197
Msa0131900 AT3G01350.1 25.487 565 380 11 17 552 5 557 7.04e-53 190
Msa0131900 AT5G11570.1 26.749 243 169 3 298 538 236 471 1.44e-24 107
Msa0131900 AT5G11570.1 26.577 222 152 5 20 234 14 231 7.52e-14 74.7
Msa0131900 AT2G38100.2 23.049 551 337 19 47 561 2 501 2.46e-24 107
Msa0131900 AT2G38100.1 22.794 544 347 18 47 561 18 517 7.26e-24 106
Msa0131900 AT2G38100.3 22.794 544 347 18 47 561 24 523 8.38e-24 105

Find 123 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACCAATAAGCTTATTT+TGG 0.146048 1_3:-62835797 Msa0131900:CDS
GATAACCAAAATAAGCTTAT+TGG 0.163029 1_3:+62835792 None:intergenic
TTGTTTCTTCCATTGAATTA+TGG 0.165374 1_3:+62839025 None:intergenic
ATTTCTTTAATTTCCTTTAT+TGG 0.181530 1_3:-62835488 Msa0131900:CDS
TCTTTCAAAAGTTTCTATTT+TGG 0.191150 1_3:-62839249 Msa0131900:five_prime_UTR
GTTTAGCTAGCTTACCATTT+TGG 0.195868 1_3:+62839147 None:intergenic
TGTTTCTTCCATTGAATTAT+GGG 0.210792 1_3:+62839026 None:intergenic
GGATCAGTTATTGGTGTTAC+TGG 0.239958 1_3:-62838122 Msa0131900:CDS
ACACTGTTGGTTCTGTTCTT+TGG 0.247262 1_3:+62839348 None:intergenic
TTTCTTTAATTTCCTTTATT+GGG 0.249409 1_3:-62835487 Msa0131900:CDS
AACAAGAATGTTACCTATAT+TGG 0.263418 1_3:-62836138 Msa0131900:CDS
CTGTGAAAGAACCAAGTTTA+AGG 0.269342 1_3:+62836042 None:intergenic
AGGTGAAACACCTCTCTTAA+TGG 0.269533 1_3:-62835400 Msa0131900:CDS
TCAACTTTGGGATCAGTTAT+TGG 0.272879 1_3:-62838131 Msa0131900:CDS
CAACACTTTGACAAATTTCA+TGG 0.272897 1_3:-62838772 Msa0131900:CDS
CAGTATTGGCTTCACTAGTT+TGG 0.275066 1_3:+62835331 None:intergenic
ACAAAGAAAAGTTCATAAAT+TGG 0.278308 1_3:+62835966 None:intergenic
AGCTTAGTACTATACTTTAT+TGG 0.282321 1_3:-62838825 Msa0131900:CDS
ATCATTGTGTTTGTATGCTT+TGG 0.282815 1_3:-62838267 Msa0131900:CDS
ACTTTCTTGCTCTCCCTTGT+TGG 0.290210 1_3:-62838744 Msa0131900:CDS
CTTGATTTACCACATGCTTT+AGG 0.299383 1_3:+62838326 None:intergenic
TTATCAACACTGTTACTAAA+AGG 0.303593 1_3:-62835608 Msa0131900:CDS
AGAGCTTCCATGTTCATCTT+TGG 0.307984 1_3:-62838990 Msa0131900:intron
ATGGAGAATACAAAGGAATT+AGG 0.323607 1_3:-62835420 Msa0131900:CDS
ATTGGTACTATTGTTGGTTC+TGG 0.324362 1_3:-62835121 Msa0131900:three_prime_UTR
TTGGTGTTACTGGTATTGTT+TGG 0.332141 1_3:-62838112 Msa0131900:CDS
ACAATTGTACTTGCCAATAT+AGG 0.334608 1_3:+62836125 None:intergenic
TCATTGTGTTTGTATGCTTT+GGG 0.336923 1_3:-62838266 Msa0131900:CDS
AAGAAAATTAGTGGGATAAC+AGG 0.341586 1_3:+62836002 None:intergenic
GCAGACATGTTCACTCTTGT+TGG 0.342817 1_3:-62835744 Msa0131900:CDS
TAAAGTTGTTCATTAGATTC+TGG 0.349322 1_3:+62837826 None:intergenic
AGAGGTTCATTAACAGCATT+TGG 0.351216 1_3:-62838230 Msa0131900:CDS
TTTCCATACTCTCTCCAAAA+TGG 0.361256 1_3:-62839161 Msa0131900:intron
ATATAGGTAACATTCTTGTT+AGG 0.364001 1_3:+62836141 None:intergenic
TGGTGTTACTGGTATTGTTT+GGG 0.373138 1_3:-62838111 Msa0131900:CDS
ACCTGAATAATCCTCAAAAT+AGG 0.374787 1_3:+62837969 None:intergenic
AGAAGAAGAATAACCTCATT+TGG 0.377972 1_3:+62837758 None:intergenic
TGCTAACCAATTTGATGAAA+AGG 0.379188 1_3:-62838207 Msa0131900:CDS
ATAACAGTAGCTTCTTCAAT+TGG 0.385104 1_3:-62838050 Msa0131900:CDS
AAAATCACTCACCACCCTTC+AGG 0.386975 1_3:-62835930 Msa0131900:CDS
TGTAACCAACCTTGTTTACT+TGG 0.393968 1_3:+62835579 None:intergenic
TAAACATTGGATGTGCAAAT+AGG 0.396118 1_3:-62835192 Msa0131900:three_prime_UTR
TGAAGTAGAAAGTGATTTCA+TGG 0.400504 1_3:+62835686 None:intergenic
TGTTTGTATGCTTTGGGAAT+GGG 0.403406 1_3:-62838260 Msa0131900:CDS
TGTACCAAGAGGCCCAATAA+AGG 0.405123 1_3:+62835475 None:intergenic
ATTTCCTTTATTGGGCCTCT+TGG 0.407164 1_3:-62835479 Msa0131900:CDS
GCCATTTCAATGACAATAGC+TGG 0.413834 1_3:-62835864 Msa0131900:CDS
ACCAGCTATTGTCATTGAAA+TGG 0.417173 1_3:+62835863 None:intergenic
AAGACATTGATATGATGTTA+AGG 0.427484 1_3:-62835241 Msa0131900:three_prime_UTR
GTGTTTGTATGCTTTGGGAA+TGG 0.428271 1_3:-62838261 Msa0131900:CDS
AGTAAACAAGGTTGGTTACA+AGG 0.439747 1_3:-62835576 Msa0131900:CDS
CAACAGATTCACCACATGTC+TGG 0.446255 1_3:-62838697 Msa0131900:CDS
GTTAAGGAAAACATAGTAGT+AGG 0.451430 1_3:-62835225 Msa0131900:three_prime_UTR
TTGGGAATGGGTGGAGTAAG+AGG 0.455587 1_3:-62838248 Msa0131900:CDS
GAAAGTGATTTCATGGTTGA+AGG 0.467352 1_3:+62835693 None:intergenic
TAATTGATTGGTACTATTGT+TGG 0.467510 1_3:-62835127 Msa0131900:three_prime_UTR
ACATAGTAGTAGGTTGTGTA+TGG 0.485213 1_3:-62835215 Msa0131900:three_prime_UTR
TGCGTGCTTGTATAATTGAT+TGG 0.487662 1_3:-62835139 Msa0131900:three_prime_UTR
AATTCAATGGAAGAAACAAA+AGG 0.488343 1_3:-62839021 Msa0131900:CDS
GATCACAATTCAAGCTGCAT+TGG 0.490985 1_3:-62838360 Msa0131900:CDS
AATGTGCATAAGAAAATTAG+TGG 0.493180 1_3:+62835993 None:intergenic
AACACTTTGACAAATTTCAT+GGG 0.510777 1_3:-62838771 Msa0131900:CDS
CAAACCTTCCATGGTTGTTG+AGG 0.513690 1_3:+62836194 None:intergenic
AACTCAAACCCATAATTCAA+TGG 0.515700 1_3:-62839034 Msa0131900:CDS
TTGTATGCTTTGGGAATGGG+TGG 0.519214 1_3:-62838257 Msa0131900:CDS
TTTGTCAGCATTGGATAACA+TGG 0.520721 1_3:-62838868 Msa0131900:CDS
TACTATTGTTGGTTCTGGCA+CGG 0.522892 1_3:-62835116 Msa0131900:three_prime_UTR
GAGGTAAGTATCTGAGATGA+AGG 0.523013 1_3:+62838719 None:intergenic
GAAATTAAGACAGCTTAAGA+TGG 0.526019 1_3:+62835506 None:intergenic
AGAAGAGGGTCCCTCAGTAT+TGG 0.526736 1_3:+62835317 None:intergenic
TAAATACTAGAATACTAGAA+TGG 0.529818 1_3:-62839381 Msa0131900:five_prime_UTR
TCTTCTGATGAAACAGATGA+TGG 0.532640 1_3:-62835297 Msa0131900:CDS
TGTTCATTAGATTCTGGCAG+TGG 0.534338 1_3:+62837832 None:intergenic
ATTCAATGGAAGAAACAAAA+GGG 0.537445 1_3:-62839020 Msa0131900:CDS
ACACCTCTCTTAATGGTTGG+TGG 0.538286 1_3:-62835393 Msa0131900:CDS
GTCACTGTGCAAACCTTCCA+TGG 0.538545 1_3:+62836185 None:intergenic
AGATAGTAACAATTCAATGA+TGG 0.541244 1_3:-62835439 Msa0131900:CDS
ATCTGTTTCATCAGAAGAAG+AGG 0.542967 1_3:+62835302 None:intergenic
CTCTGTGTGTGCAGAGTCAA+AGG 0.543882 1_3:-62835084 Msa0131900:three_prime_UTR
AATTAGTGGGATAACAGGAA+TGG 0.550662 1_3:+62836007 None:intergenic
CATGAAATTTGTCAAAGTGT+TGG 0.551927 1_3:+62838773 None:intergenic
GTTACACAGCTTCAAAGAGT+TGG 0.552152 1_3:-62835906 Msa0131900:CDS
AATGCAATGAACCTTAAACT+TGG 0.561968 1_3:-62836053 Msa0131900:CDS
TTGAGATTGAAATGAGAAGA+AGG 0.571870 1_3:+62839213 None:intergenic
TGAAGCTGTGTAACACCTGA+AGG 0.572853 1_3:+62835915 None:intergenic
AAAACATGATGATAAAGCTA+AGG 0.573309 1_3:-62835367 Msa0131900:CDS
GAAGTTAAAAGAAGAGACCA+AGG 0.573829 1_3:-62835834 Msa0131900:CDS
TGAGATGAAGGCACCAACAA+GGG 0.577394 1_3:+62838731 None:intergenic
GACGGTGAGCACAGAAACCA+AGG 0.581377 1_3:-62839440 Msa0131900:five_prime_UTR
TGAACCTCAACAACCATGGA+AGG 0.582478 1_3:-62836198 Msa0131900:CDS
CAGCTTCAAAGAGTTGGTGT+TGG 0.586012 1_3:-62835900 Msa0131900:CDS
CAAACATTCTCAGTACAACA+AGG 0.586833 1_3:-62836077 Msa0131900:CDS
TTGCACACACTAACCAAATG+AGG 0.588659 1_3:-62837771 Msa0131900:intron
ATAACAGGAATGGATGATGC+AGG 0.589149 1_3:+62836017 None:intergenic
CTGAGATGAAGGCACCAACA+AGG 0.591772 1_3:+62838730 None:intergenic
CTTCCACCAACCATTAAGAG+AGG 0.596589 1_3:+62835390 None:intergenic
TTGTCAGCATTGGATAACAT+GGG 0.598817 1_3:-62838867 Msa0131900:CDS
CAAGAAGTAACCAAGTGACA+TGG 0.600735 1_3:+62835650 None:intergenic
CTCAAAATAGGACTTTCACC+AGG 0.610110 1_3:+62837981 None:intergenic
GAAACACCTCTCTTAATGGT+TGG 0.612482 1_3:-62835396 Msa0131900:CDS
ATTCTGAACCTCAACAACCA+TGG 0.613634 1_3:-62836202 Msa0131900:CDS
TTGGATGTGCAAATAGGAAG+TGG 0.626202 1_3:-62835186 Msa0131900:three_prime_UTR
TTCAATGATGGAGAATACAA+AGG 0.626874 1_3:-62835427 Msa0131900:CDS
TCACACCAAGTAAACAAGGT+TGG 0.627331 1_3:-62835584 Msa0131900:CDS
ATGTGCATAAGAAAATTAGT+GGG 0.636944 1_3:+62835994 None:intergenic
AAATCAAGTTGTGTGGAAGG+AGG 0.637005 1_3:-62838311 Msa0131900:CDS
ACTAGTAAAGCATGTTAAGA+CGG 0.638731 1_3:-62839458 Msa0131900:five_prime_UTR
AGGATCACACCAAGTAAACA+AGG 0.639605 1_3:-62835588 Msa0131900:CDS
TGATTTGTACTTGTACCAAG+AGG 0.641427 1_3:+62835464 None:intergenic
TCTGTTTCATCAGAAGAAGA+GGG 0.647970 1_3:+62835303 None:intergenic
AATTTACATCCTAAAGCATG+TGG 0.649108 1_3:-62838335 Msa0131900:CDS
GGTAAATCAAGTTGTGTGGA+AGG 0.653776 1_3:-62838314 Msa0131900:CDS
CAATGGAAGAAACAAAAGGG+TGG 0.662396 1_3:-62839017 Msa0131900:CDS
ACTAGTGAAGCCAATACTGA+GGG 0.666695 1_3:-62835327 Msa0131900:CDS
AGGTTGTGTATGGTAAACAT+TGG 0.668701 1_3:-62835205 Msa0131900:three_prime_UTR
AACTAGTGAAGCCAATACTG+AGG 0.674814 1_3:-62835328 Msa0131900:CDS
GAAGCTGTGTAACACCTGAA+GGG 0.679710 1_3:+62835916 None:intergenic
AAACATTCTCAGTACAACAA+GGG 0.685525 1_3:-62836076 Msa0131900:CDS
GTACTTACCAAAGATGAACA+TGG 0.689840 1_3:+62838983 None:intergenic
ATGTGGTAAATCAAGTTGTG+TGG 0.691318 1_3:-62838318 Msa0131900:CDS
GACATGTGGTGAATCTGTTG+AGG 0.692585 1_3:+62838700 None:intergenic
ACGGTGAGCACAGAAACCAA+GGG 0.709215 1_3:-62839439 Msa0131900:five_prime_UTR
GCTGTGTAACACCTGAAGGG+TGG 0.734299 1_3:+62835919 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTATTTTATGTAAT+TGG + chr1_3:62835854-62835873 None:intergenic 10.0%
!! AAATAAAGAAAAAAAACATT+TGG - chr1_3:62835862-62835881 Msa0131900:CDS 10.0%
!!! ATTTTATTTTCTTAATACTT+TGG - chr1_3:62837220-62837239 Msa0131900:intron 10.0%
!!! TTTTATTTTCTTAATACTTT+GGG - chr1_3:62837221-62837240 Msa0131900:intron 10.0%
!!! TCTTATTCTTATTTAATTTT+TGG + chr1_3:62837531-62837550 None:intergenic 10.0%
!! AAAAACAAATAGTGTTAATT+TGG + chr1_3:62835487-62835506 None:intergenic 15.0%
!! TTATCACAAAATGTTAATTA+AGG + chr1_3:62836716-62836735 None:intergenic 15.0%
!!! TTCTTATTTAATTTTTGGTT+AGG + chr1_3:62837526-62837545 None:intergenic 15.0%
!! TAAGAATAAGAAATAAAAAG+TGG - chr1_3:62837546-62837565 Msa0131900:intron 15.0%
!!! GTTATTTATTTATTTTGAGA+GGG - chr1_3:62837997-62838016 Msa0131900:CDS 15.0%
!!! ATTTCTTTAATTTCCTTTAT+TGG - chr1_3:62838946-62838965 Msa0131900:intron 15.0%
!!! TTTCTTTAATTTCCTTTATT+GGG - chr1_3:62838947-62838966 Msa0131900:intron 15.0%
!! TAAATACTAGAATACTAGAA+TGG - chr1_3:62835053-62835072 Msa0131900:three_prime_UTR 20.0%
!!! TCTTTCAAAAGTTTCTATTT+TGG - chr1_3:62835185-62835204 Msa0131900:three_prime_UTR 20.0%
!!! CTTTCAAAAGTTTCTATTTT+GGG - chr1_3:62835186-62835205 Msa0131900:three_prime_UTR 20.0%
!!! AGTTTGAAATATGTTACTAT+AGG - chr1_3:62835356-62835375 Msa0131900:CDS 20.0%
!!! GTTTGAAATATGTTACTATA+GGG - chr1_3:62835357-62835376 Msa0131900:CDS 20.0%
!!! TGTAACAAAACATATTGATT+TGG - chr1_3:62835516-62835535 Msa0131900:CDS 20.0%
!!! TATTTTATGTAATTGGAACA+TGG + chr1_3:62835847-62835866 None:intergenic 20.0%
!!! TTTTGTTTGGTACAAAATTA+CGG - chr1_3:62835936-62835955 Msa0131900:CDS 20.0%
!!! TTTTAATCATTGTATTGTGT+AGG - chr1_3:62836041-62836060 Msa0131900:CDS 20.0%
!!! TTTAGTTTTACTTAGTGAAA+TGG - chr1_3:62837408-62837427 Msa0131900:intron 20.0%
!!! TTTAAGTGTTGATAATTGTT+GGG + chr1_3:62837496-62837515 None:intergenic 20.0%
!!! ATTTAAGTGTTGATAATTGT+TGG + chr1_3:62837497-62837516 None:intergenic 20.0%
!! AATAAGAAATAAAAAGTGGT+GGG - chr1_3:62837550-62837569 Msa0131900:intron 20.0%
!!! TATCACTTTTTCTTATGTTT+TGG + chr1_3:62837727-62837746 None:intergenic 20.0%
!!! CAAGTACCAATTATTTATTT+TGG - chr1_3:62837864-62837883 Msa0131900:CDS 20.0%
!! ATGGTTCCAAAATAAATAAT+TGG + chr1_3:62837873-62837892 None:intergenic 20.0%
!!! GGTTATTTATTTATTTTGAG+AGG - chr1_3:62837996-62838015 Msa0131900:CDS 20.0%
!! ACAAAGAAAAGTTCATAAAT+TGG + chr1_3:62838471-62838490 None:intergenic 20.0%
!!! TGAGTGATTTTTCTAATAAA+TGG + chr1_3:62838495-62838514 None:intergenic 20.0%
!!! TCTTTTCAATATGCTATATT+TGG - chr1_3:62838663-62838682 Msa0131900:intron 20.0%
!!! ACAATTTGAACTTGTTTTAT+TGG - chr1_3:62838898-62838917 Msa0131900:intron 20.0%
!! TTTTTAATGTCTTACACTGT+TGG + chr1_3:62835102-62835121 None:intergenic 25.0%
! TTAAAAATAAGAACCTCTTG+TGG - chr1_3:62835115-62835134 Msa0131900:three_prime_UTR 25.0%
! TGTTTCTTCCATTGAATTAT+GGG + chr1_3:62835411-62835430 None:intergenic 25.0%
!! TTGTTTCTTCCATTGAATTA+TGG + chr1_3:62835412-62835431 None:intergenic 25.0%
! AATTCAATGGAAGAAACAAA+AGG - chr1_3:62835413-62835432 Msa0131900:CDS 25.0%
! ATTCAATGGAAGAAACAAAA+GGG - chr1_3:62835414-62835433 Msa0131900:CDS 25.0%
! AGCTTAGTACTATACTTTAT+TGG - chr1_3:62835609-62835628 Msa0131900:CDS 25.0%
! AACACTTTGACAAATTTCAT+GGG - chr1_3:62835663-62835682 Msa0131900:CDS 25.0%
!! AAAAAACATTTGGTTTAGAG+AGG - chr1_3:62835872-62835891 Msa0131900:CDS 25.0%
!! CTTTTACTTAGTTCAACTTT+GGG - chr1_3:62836291-62836310 Msa0131900:intron 25.0%
!!! TAACCATTATTGTTTTATGC+AGG - chr1_3:62836547-62836566 Msa0131900:intron 25.0%
! TAACCTGCATAAAACAATAA+TGG + chr1_3:62836553-62836572 None:intergenic 25.0%
! TAAAGTTGTTCATTAGATTC+TGG + chr1_3:62836611-62836630 None:intergenic 25.0%
!!! AACATTTTGTGATAATGTGT+TGG - chr1_3:62836721-62836740 Msa0131900:intron 25.0%
! ATTAAGTAATGCCAAGAATT+TGG - chr1_3:62836841-62836860 Msa0131900:intron 25.0%
! TTAAGTAATGCCAAGAATTT+GGG - chr1_3:62836842-62836861 Msa0131900:intron 25.0%
!! AGTATTCAATAGGTTGAAAA+CGG - chr1_3:62837044-62837063 Msa0131900:intron 25.0%
! CATTCTCATTGTTTGAAAAA+TGG - chr1_3:62837087-62837106 Msa0131900:intron 25.0%
! GATTAAGAGAGTAAAAAACT+TGG + chr1_3:62837364-62837383 None:intergenic 25.0%
!!! GTGTTGAGTTGATTATTATT+GGG + chr1_3:62837436-62837455 None:intergenic 25.0%
! GAATAAGAAATAAAAAGTGG+TGG - chr1_3:62837549-62837568 Msa0131900:intron 25.0%
! ATAAGAAATAAAAAGTGGTG+GGG - chr1_3:62837551-62837570 Msa0131900:intron 25.0%
! AAATACCACAAAGAAAAAGA+GGG + chr1_3:62837799-62837818 None:intergenic 25.0%
! CTATGTTATCTACAAAGTAA+AGG + chr1_3:62837833-62837852 None:intergenic 25.0%
!!! TTTATTTATTTTGAGAGGGT+AGG - chr1_3:62838001-62838020 Msa0131900:CDS 25.0%
!!! TTATTTATTTTGAGAGGGTA+GGG - chr1_3:62838002-62838021 Msa0131900:CDS 25.0%
! TTGTGTAAAGGGAAATAAAT+GGG + chr1_3:62838129-62838148 None:intergenic 25.0%
! TTTGTGTAAAGGGAAATAAA+TGG + chr1_3:62838130-62838149 None:intergenic 25.0%
! CATGCATTTATTTGTGTAAA+GGG + chr1_3:62838140-62838159 None:intergenic 25.0%
! GCATTTATACTCAAATGTTA+TGG - chr1_3:62838159-62838178 Msa0131900:CDS 25.0%
! ATATAGGTAACATTCTTGTT+AGG + chr1_3:62838296-62838315 None:intergenic 25.0%
! AACAAGAATGTTACCTATAT+TGG - chr1_3:62838296-62838315 Msa0131900:CDS 25.0%
! ATGTGCATAAGAAAATTAGT+GGG + chr1_3:62838443-62838462 None:intergenic 25.0%
! AATGTGCATAAGAAAATTAG+TGG + chr1_3:62838444-62838463 None:intergenic 25.0%
!!! ATAAGCTTATTGGTTTTGAA+GGG + chr1_3:62838635-62838654 None:intergenic 25.0%
!!! AATAAGCTTATTGGTTTTGA+AGG + chr1_3:62838636-62838655 None:intergenic 25.0%
!! CAAAACCAATAAGCTTATTT+TGG - chr1_3:62838637-62838656 Msa0131900:intron 25.0%
! GATAACCAAAATAAGCTTAT+TGG + chr1_3:62838645-62838664 None:intergenic 25.0%
! TTATCAACACTGTTACTAAA+AGG - chr1_3:62838826-62838845 Msa0131900:CDS 25.0%
! AGATAGTAACAATTCAATGA+TGG - chr1_3:62838995-62839014 Msa0131900:CDS 25.0%
! AAAACATGATGATAAAGCTA+AGG - chr1_3:62839067-62839086 Msa0131900:intron 25.0%
! AAGACATTGATATGATGTTA+AGG - chr1_3:62839193-62839212 Msa0131900:five_prime_UTR 25.0%
! TAATTGATTGGTACTATTGT+TGG - chr1_3:62839307-62839326 Msa0131900:five_prime_UTR 25.0%
ACTAGTAAAGCATGTTAAGA+CGG - chr1_3:62834976-62834995 Msa0131900:three_prime_UTR 30.0%
TGATCATAAAAATCCACAAG+AGG + chr1_3:62835131-62835150 None:intergenic 30.0%
TTGAGATTGAAATGAGAAGA+AGG + chr1_3:62835224-62835243 None:intergenic 30.0%
CAAACTGTTACAAAAGAGAA+GGG + chr1_3:62835342-62835361 None:intergenic 30.0%
TCAAACTGTTACAAAAGAGA+AGG + chr1_3:62835343-62835362 None:intergenic 30.0%
AACTCAAACCCATAATTCAA+TGG - chr1_3:62835400-62835419 Msa0131900:CDS 30.0%
CATGAAATTTGTCAAAGTGT+TGG + chr1_3:62835664-62835683 None:intergenic 30.0%
CAACACTTTGACAAATTTCA+TGG - chr1_3:62835662-62835681 Msa0131900:CDS 30.0%
AATTTACATCCTAAAGCATG+TGG - chr1_3:62836099-62836118 Msa0131900:CDS 30.0%
ATCATTGTGTTTGTATGCTT+TGG - chr1_3:62836167-62836186 Msa0131900:CDS 30.0%
TCATTGTGTTTGTATGCTTT+GGG - chr1_3:62836168-62836187 Msa0131900:CDS 30.0%
TGCTAACCAATTTGATGAAA+AGG - chr1_3:62836227-62836246 Msa0131900:CDS 30.0%
! TTGGATCCTTTTCATCAAAT+TGG + chr1_3:62836236-62836255 None:intergenic 30.0%
!!! CACTTGCAACTTTTTTCAAT+TGG - chr1_3:62836268-62836287 Msa0131900:intron 30.0%
! GCTTTTACTTAGTTCAACTT+TGG - chr1_3:62836290-62836309 Msa0131900:intron 30.0%
ATAACAGTAGCTTCTTCAAT+TGG - chr1_3:62836384-62836403 Msa0131900:intron 30.0%
!! TCCTATTTTGAGGATTATTC+AGG - chr1_3:62836464-62836483 Msa0131900:intron 30.0%
ACCTGAATAATCCTCAAAAT+AGG + chr1_3:62836468-62836487 None:intergenic 30.0%
! TTTTATGCAGGTTATTGTTG+TGG - chr1_3:62836559-62836578 Msa0131900:intron 30.0%
AGAAGAAGAATAACCTCATT+TGG + chr1_3:62836679-62836698 None:intergenic 30.0%
ATAATGTGTTGGACTAACTT+AGG - chr1_3:62836732-62836751 Msa0131900:intron 30.0%
AAAGAATCTTAACAATGTGC+TGG + chr1_3:62836804-62836823 None:intergenic 30.0%
GTTTCATCTATTGAAACCAT+TGG - chr1_3:62836979-62836998 Msa0131900:intron 30.0%
!! AGCTGATGAAAGTATTCAAT+AGG - chr1_3:62837034-62837053 Msa0131900:intron 30.0%
GAGACTTGAATCATTTGATT+TGG - chr1_3:62837324-62837343 Msa0131900:intron 30.0%
!! GGTGTTGAGTTGATTATTAT+TGG + chr1_3:62837437-62837456 None:intergenic 30.0%
TGGGTAATCAAAAGAACTTT+GGG + chr1_3:62837458-62837477 None:intergenic 30.0%
ATGGGTAATCAAAAGAACTT+TGG + chr1_3:62837459-62837478 None:intergenic 30.0%
! TGGGATTTTTGTAGCTAAAT+GGG + chr1_3:62837477-62837496 None:intergenic 30.0%
! TTGGGATTTTTGTAGCTAAA+TGG + chr1_3:62837478-62837497 None:intergenic 30.0%
! TTCAATTTTTACCTCTCCAA+TGG + chr1_3:62837595-62837614 None:intergenic 30.0%
TTGGAGAGGTAAAAATTGAA+TGG - chr1_3:62837595-62837614 Msa0131900:intron 30.0%
TGGAGAGGTAAAAATTGAAT+GGG - chr1_3:62837596-62837615 Msa0131900:intron 30.0%
TTAAGAGAGAGAAAATGATG+TGG - chr1_3:62837626-62837645 Msa0131900:intron 30.0%
! AGTGTTGGAAATTGAAAAAG+TGG - chr1_3:62837649-62837668 Msa0131900:intron 30.0%
GTGTTGGAAATTGAAAAAGT+GGG - chr1_3:62837650-62837669 Msa0131900:intron 30.0%
TTAACTAAGACCATGTACAA+TGG + chr1_3:62837702-62837721 None:intergenic 30.0%
! TTTTTCCCTCTTTTTCTTTG+TGG - chr1_3:62837791-62837810 Msa0131900:CDS 30.0%
CAAATACCACAAAGAAAAAG+AGG + chr1_3:62837800-62837819 None:intergenic 30.0%
! CTCTTTTTCTTTGTGGTATT+TGG - chr1_3:62837798-62837817 Msa0131900:CDS 30.0%
!!! TATTTATTTTGAGAGGGTAG+GGG - chr1_3:62838003-62838022 Msa0131900:CDS 30.0%
AATTGCTAAGGTGAAATTGA+AGG - chr1_3:62838032-62838051 Msa0131900:CDS 30.0%
GATGACAAAGATATTGTTTG+TGG - chr1_3:62838079-62838098 Msa0131900:CDS 30.0%
GCATGCATTTATTTGTGTAA+AGG + chr1_3:62838141-62838160 None:intergenic 30.0%
! ACTCAAATGTTATGGTTTGT+TGG - chr1_3:62838167-62838186 Msa0131900:CDS 30.0%
ACAATTGTACTTGCCAATAT+AGG + chr1_3:62838312-62838331 None:intergenic 30.0%
AAACATTCTCAGTACAACAA+GGG - chr1_3:62838358-62838377 Msa0131900:CDS 30.0%
AATGCAATGAACCTTAAACT+TGG - chr1_3:62838381-62838400 Msa0131900:intron 30.0%
AAGAAAATTAGTGGGATAAC+AGG + chr1_3:62838435-62838454 None:intergenic 30.0%
TGAAGTAGAAAGTGATTTCA+TGG + chr1_3:62838751-62838770 None:intergenic 30.0%
GAAATTAAGACAGCTTAAGA+TGG + chr1_3:62838931-62838950 None:intergenic 30.0%
! TTCAATGATGGAGAATACAA+AGG - chr1_3:62839007-62839026 Msa0131900:CDS 30.0%
ATGGAGAATACAAAGGAATT+AGG - chr1_3:62839014-62839033 Msa0131900:CDS 30.0%
GTTAAGGAAAACATAGTAGT+AGG - chr1_3:62839209-62839228 Msa0131900:five_prime_UTR 30.0%
TAAACATTGGATGTGCAAAT+AGG - chr1_3:62839242-62839261 Msa0131900:five_prime_UTR 30.0%
ACAGAAACCAAGGGAAAAAA+AGG - chr1_3:62835004-62835023 Msa0131900:three_prime_UTR 35.0%
!!! CTTTCTACCTTTTTTTCCCT+TGG + chr1_3:62835014-62835033 None:intergenic 35.0%
TTTCCATACTCTCTCCAAAA+TGG - chr1_3:62835273-62835292 Msa0131900:CDS 35.0%
!! TTACCATTTTGGAGAGAGTA+TGG + chr1_3:62835279-62835298 None:intergenic 35.0%
!! GTTTAGCTAGCTTACCATTT+TGG + chr1_3:62835290-62835309 None:intergenic 35.0%
GTACTTACCAAAGATGAACA+TGG + chr1_3:62835454-62835473 None:intergenic 35.0%
!!! TGATGTAGTTTTGTCAGCAT+TGG - chr1_3:62835557-62835576 Msa0131900:CDS 35.0%
! TTTGTCAGCATTGGATAACA+TGG - chr1_3:62835566-62835585 Msa0131900:CDS 35.0%
! TTGTCAGCATTGGATAACAT+GGG - chr1_3:62835567-62835586 Msa0131900:CDS 35.0%
TGTAATTGGAACATGGCATT+GGG + chr1_3:62835840-62835859 None:intergenic 35.0%
ATGTAATTGGAACATGGCAT+TGG + chr1_3:62835841-62835860 None:intergenic 35.0%
TCATTGTATTGTGTAGGCTT+TGG - chr1_3:62836047-62836066 Msa0131900:CDS 35.0%
CTTGATTTACCACATGCTTT+AGG + chr1_3:62836111-62836130 None:intergenic 35.0%
! ATGTGGTAAATCAAGTTGTG+TGG - chr1_3:62836116-62836135 Msa0131900:CDS 35.0%
!! TGTTTGTATGCTTTGGGAAT+GGG - chr1_3:62836174-62836193 Msa0131900:CDS 35.0%
AGAGGTTCATTAACAGCATT+TGG - chr1_3:62836204-62836223 Msa0131900:CDS 35.0%
!! TCAACTTTGGGATCAGTTAT+TGG - chr1_3:62836303-62836322 Msa0131900:intron 35.0%
!! TTGGTGTTACTGGTATTGTT+TGG - chr1_3:62836322-62836341 Msa0131900:intron 35.0%
!! TGGTGTTACTGGTATTGTTT+GGG - chr1_3:62836323-62836342 Msa0131900:intron 35.0%
TACACAAAAAGCTTGGCATT+GGG - chr1_3:62836350-62836369 Msa0131900:intron 35.0%
!!! GGTTTTGTAACACTTGCTAT+TGG - chr1_3:62836405-62836424 Msa0131900:intron 35.0%
!! GGAGTTTTGATACGGTAAAA+AGG + chr1_3:62836435-62836454 None:intergenic 35.0%
! TTTTACCGTATCAAAACTCC+TGG - chr1_3:62836435-62836454 Msa0131900:intron 35.0%
!! TTTCACCAGGAGTTTTGATA+CGG + chr1_3:62836443-62836462 None:intergenic 35.0%
AGACTTACAGAGAATGATCA+TGG - chr1_3:62836900-62836919 Msa0131900:intron 35.0%
ATGGTCTAAAAAGCAAAGAG+AGG + chr1_3:62836935-62836954 None:intergenic 35.0%
CTTCAATAATGCTTCTCCAA+TGG + chr1_3:62836998-62837017 None:intergenic 35.0%
!! GAGAAGCATTATTGAAGATG+AGG - chr1_3:62837001-62837020 Msa0131900:intron 35.0%
AAGCATTATTGAAGATGAGG+TGG - chr1_3:62837004-62837023 Msa0131900:intron 35.0%
! AAATAAAAAGTGGTGGGGTA+GGG - chr1_3:62837556-62837575 Msa0131900:intron 35.0%
TTGAATGAAAACCATTGGAG+AGG - chr1_3:62837581-62837600 Msa0131900:intron 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr1_3:62837659-62837678 Msa0131900:intron 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG - chr1_3:62837660-62837679 Msa0131900:intron 35.0%
ATGGAAATGACCATTGTACA+TGG - chr1_3:62837689-62837708 Msa0131900:intron 35.0%
!! TTTTTCAGTGAGTTTGTGTC+AGG + chr1_3:62837761-62837780 None:intergenic 35.0%
CGATTAGGTCATACTTTCTA+TGG + chr1_3:62837892-62837911 None:intergenic 35.0%
! TAGAAAGTATGACCTAATCG+TGG - chr1_3:62837892-62837911 Msa0131900:intron 35.0%
CTGATTTCGTTGTGAAATCA+GGG + chr1_3:62837925-62837944 None:intergenic 35.0%
CTGATTTCACAACGAAATCA+GGG - chr1_3:62837924-62837943 Msa0131900:intron 35.0%
TGATTCAAAACACACGCTAA+GGG - chr1_3:62837975-62837994 Msa0131900:CDS 35.0%
!! ATGGTTTGTTGGATTGAATC+AGG - chr1_3:62838178-62838197 Msa0131900:CDS 35.0%
CAAACATTCTCAGTACAACA+AGG - chr1_3:62838357-62838376 Msa0131900:CDS 35.0%
CTGTGAAAGAACCAAGTTTA+AGG + chr1_3:62838395-62838414 None:intergenic 35.0%
AATTAGTGGGATAACAGGAA+TGG + chr1_3:62838430-62838449 None:intergenic 35.0%
ACCAGCTATTGTCATTGAAA+TGG + chr1_3:62838574-62838593 None:intergenic 35.0%
GAAGTTAAAAGAAGAGACCA+AGG - chr1_3:62838600-62838619 Msa0131900:intron 35.0%
GAAAGTGATTTCATGGTTGA+AGG + chr1_3:62838744-62838763 None:intergenic 35.0%
! TGTAACCAACCTTGTTTACT+TGG + chr1_3:62838858-62838877 None:intergenic 35.0%
! AGTAAACAAGGTTGGTTACA+AGG - chr1_3:62838858-62838877 Msa0131900:CDS 35.0%
! TGATTTGTACTTGTACCAAG+AGG + chr1_3:62838973-62838992 None:intergenic 35.0%
TCTGTTTCATCAGAAGAAGA+GGG + chr1_3:62839134-62839153 None:intergenic 35.0%
ATCTGTTTCATCAGAAGAAG+AGG + chr1_3:62839135-62839154 None:intergenic 35.0%
TCTTCTGATGAAACAGATGA+TGG - chr1_3:62839137-62839156 Msa0131900:intron 35.0%
ACATAGTAGTAGGTTGTGTA+TGG - chr1_3:62839219-62839238 Msa0131900:five_prime_UTR 35.0%
AGGTTGTGTATGGTAAACAT+TGG - chr1_3:62839229-62839248 Msa0131900:five_prime_UTR 35.0%
TGCGTGCTTGTATAATTGAT+TGG - chr1_3:62839295-62839314 Msa0131900:five_prime_UTR 35.0%
!! ATTGGTACTATTGTTGGTTC+TGG - chr1_3:62839313-62839332 Msa0131900:five_prime_UTR 35.0%
!! ACACTGTTGGTTCTGTTCTT+TGG + chr1_3:62835089-62835108 None:intergenic 40.0%
CAATGGAAGAAACAAAAGGG+TGG - chr1_3:62835417-62835436 Msa0131900:CDS 40.0%
AGAGCTTCCATGTTCATCTT+TGG - chr1_3:62835444-62835463 Msa0131900:CDS 40.0%
!! CATGGGTTTTGTGACAAACA+TGG - chr1_3:62835584-62835603 Msa0131900:CDS 40.0%
! GAGGTAAGTATCTGAGATGA+AGG + chr1_3:62835718-62835737 None:intergenic 40.0%
!!! TTCACCACATGTCTGGTTTT+TGG - chr1_3:62835744-62835763 Msa0131900:CDS 40.0%
TGATCCAAAAACCAGACATG+TGG + chr1_3:62835751-62835770 None:intergenic 40.0%
! TGGCATTGGGATTTGGAATT+TGG + chr1_3:62835827-62835846 None:intergenic 40.0%
CGTGATTCTGTCAAACTCAT+CGG + chr1_3:62835907-62835926 None:intergenic 40.0%
CGATGAGTTTGACAGAATCA+CGG - chr1_3:62835905-62835924 Msa0131900:CDS 40.0%
!!! CACGGTTAGTCACTTTTGTT+TGG - chr1_3:62835923-62835942 Msa0131900:CDS 40.0%
GATCACAATTCAAGCTGCAT+TGG - chr1_3:62836074-62836093 Msa0131900:CDS 40.0%
! GGTAAATCAAGTTGTGTGGA+AGG - chr1_3:62836120-62836139 Msa0131900:CDS 40.0%
! AAATCAAGTTGTGTGGAAGG+AGG - chr1_3:62836123-62836142 Msa0131900:CDS 40.0%
!! GTGTTTGTATGCTTTGGGAA+TGG - chr1_3:62836173-62836192 Msa0131900:CDS 40.0%
! GCAAGTGCTTTTGCTTCATT+TGG + chr1_3:62836255-62836274 None:intergenic 40.0%
!! GGATCAGTTATTGGTGTTAC+TGG - chr1_3:62836312-62836331 Msa0131900:intron 40.0%
! GGGTTAGTACACAAAAAGCT+TGG - chr1_3:62836343-62836362 Msa0131900:intron 40.0%
GTACACAAAAAGCTTGGCAT+TGG - chr1_3:62836349-62836368 Msa0131900:intron 40.0%
ACACAAAAAGCTTGGCATTG+GGG - chr1_3:62836351-62836370 Msa0131900:intron 40.0%
CTCAAAATAGGACTTTCACC+AGG + chr1_3:62836456-62836475 None:intergenic 40.0%
! CTGGTGAAAGTCCTATTTTG+AGG - chr1_3:62836454-62836473 Msa0131900:intron 40.0%
TGTTCATTAGATTCTGGCAG+TGG + chr1_3:62836605-62836624 None:intergenic 40.0%
TTGCACACACTAACCAAATG+AGG - chr1_3:62836663-62836682 Msa0131900:intron 40.0%
TGATAGTAGGCCCAAATTCT+TGG + chr1_3:62836855-62836874 None:intergenic 40.0%
GTGTAGAAGTGAGTGATAGT+AGG + chr1_3:62836868-62836887 None:intergenic 40.0%
ATCACTCACTTCTACACGTT+CGG - chr1_3:62836871-62836890 Msa0131900:intron 40.0%
! GCTTTTTAGACCATCTCCAA+TGG - chr1_3:62836941-62836960 Msa0131900:intron 40.0%
ATTCAACAAGCCATTGGAGA+TGG + chr1_3:62836954-62836973 None:intergenic 40.0%
!! ATCTCCAATGGCTTGTTGAA+TGG - chr1_3:62836953-62836972 Msa0131900:intron 40.0%
CATTATTGAAGATGAGGTGG+AGG - chr1_3:62837007-62837026 Msa0131900:intron 40.0%
AGAGAAAACTTTGTGGGGAT+AGG - chr1_3:62837162-62837181 Msa0131900:intron 40.0%
AAAACTTTGTGGGGATAGGA+GGG - chr1_3:62837166-62837185 Msa0131900:intron 40.0%
! GAAATAAAAAGTGGTGGGGT+AGG - chr1_3:62837555-62837574 Msa0131900:intron 40.0%
!! GGGTGTTGAATGAAAACCAT+TGG - chr1_3:62837576-62837595 Msa0131900:intron 40.0%
GAGAAAATGATGTGGAGTGT+TGG - chr1_3:62837634-62837653 Msa0131900:intron 40.0%
ATTTCGTTGTGAAATCAGGG+TGG + chr1_3:62837922-62837941 None:intergenic 40.0%
CCTGATTTCGTTGTGAAATC+AGG + chr1_3:62837926-62837945 None:intergenic 40.0%
CCTGATTTCACAACGAAATC+AGG - chr1_3:62837923-62837942 Msa0131900:intron 40.0%
GTGATTCAAAACACACGCTA+AGG - chr1_3:62837974-62837993 Msa0131900:CDS 40.0%
ATTCTGAACCTCAACAACCA+TGG - chr1_3:62838232-62838251 Msa0131900:CDS 40.0%
ATAACAGGAATGGATGATGC+AGG + chr1_3:62838420-62838439 None:intergenic 40.0%
GTTACACAGCTTCAAAGAGT+TGG - chr1_3:62838528-62838547 Msa0131900:intron 40.0%
GCCATTTCAATGACAATAGC+TGG - chr1_3:62838570-62838589 Msa0131900:intron 40.0%
! TTGAAGGGTCTTTTCTTCCT+TGG + chr1_3:62838620-62838639 None:intergenic 40.0%
! ACGTTTTTGTCCATGTCACT+TGG - chr1_3:62838774-62838793 Msa0131900:CDS 40.0%
CAAGAAGTAACCAAGTGACA+TGG + chr1_3:62838787-62838806 None:intergenic 40.0%
AGGATCACACCAAGTAAACA+AGG - chr1_3:62838846-62838865 Msa0131900:CDS 40.0%
TCACACCAAGTAAACAAGGT+TGG - chr1_3:62838850-62838869 Msa0131900:CDS 40.0%
ATTTCCTTTATTGGGCCTCT+TGG - chr1_3:62838955-62838974 Msa0131900:intron 40.0%
AGGTGAAACACCTCTCTTAA+TGG - chr1_3:62839034-62839053 Msa0131900:CDS 40.0%
GAAACACCTCTCTTAATGGT+TGG - chr1_3:62839038-62839057 Msa0131900:CDS 40.0%
!! CAGTATTGGCTTCACTAGTT+TGG + chr1_3:62839106-62839125 None:intergenic 40.0%
AACTAGTGAAGCCAATACTG+AGG - chr1_3:62839106-62839125 Msa0131900:intron 40.0%
ACTAGTGAAGCCAATACTGA+GGG - chr1_3:62839107-62839126 Msa0131900:intron 40.0%
TTGGATGTGCAAATAGGAAG+TGG - chr1_3:62839248-62839267 Msa0131900:five_prime_UTR 40.0%
!! TACTATTGTTGGTTCTGGCA+CGG - chr1_3:62839318-62839337 Msa0131900:five_prime_UTR 40.0%
ACTTTCTTGCTCTCCCTTGT+TGG - chr1_3:62835690-62835709 Msa0131900:CDS 45.0%
!! TGAGATGAAGGCACCAACAA+GGG + chr1_3:62835706-62835725 None:intergenic 45.0%
GACATGTGGTGAATCTGTTG+AGG + chr1_3:62835737-62835756 None:intergenic 45.0%
CAACAGATTCACCACATGTC+TGG - chr1_3:62835737-62835756 Msa0131900:CDS 45.0%
! TGGAACATGGCATTGGGATT+TGG + chr1_3:62835834-62835853 None:intergenic 45.0%
TTCTGTCAAACTCATCGGTG+AGG + chr1_3:62835902-62835921 None:intergenic 45.0%
!! TTGTATGCTTTGGGAATGGG+TGG - chr1_3:62836177-62836196 Msa0131900:CDS 45.0%
TCACTCACTTCTACACGTTC+GGG - chr1_3:62836872-62836891 Msa0131900:intron 45.0%
CTTGCCATTCAACAAGCCAT+TGG + chr1_3:62836960-62836979 None:intergenic 45.0%
AACAATGAGAATGCAACGCG+TGG + chr1_3:62837080-62837099 None:intergenic 45.0%
GCGGAGAGAGAAAACTTTGT+GGG - chr1_3:62837156-62837175 Msa0131900:intron 45.0%
CGGAGAGAGAAAACTTTGTG+GGG - chr1_3:62837157-62837176 Msa0131900:intron 45.0%
GAAAACTTTGTGGGGATAGG+AGG - chr1_3:62837165-62837184 Msa0131900:intron 45.0%
!!! TTATTTTGAGAGGGTAGGGG+AGG - chr1_3:62838006-62838025 Msa0131900:CDS 45.0%
TGAACCTCAACAACCATGGA+AGG - chr1_3:62838236-62838255 Msa0131900:CDS 45.0%
CAAACCTTCCATGGTTGTTG+AGG + chr1_3:62838243-62838262 None:intergenic 45.0%
AAAATCACTCACCACCCTTC+AGG - chr1_3:62838504-62838523 Msa0131900:intron 45.0%
GAAGCTGTGTAACACCTGAA+GGG + chr1_3:62838521-62838540 None:intergenic 45.0%
TGAAGCTGTGTAACACCTGA+AGG + chr1_3:62838522-62838541 None:intergenic 45.0%
!! CAGCTTCAAAGAGTTGGTGT+TGG - chr1_3:62838534-62838553 Msa0131900:intron 45.0%
GCAGACATGTTCACTCTTGT+TGG - chr1_3:62838690-62838709 Msa0131900:CDS 45.0%
TGTACCAAGAGGCCCAATAA+AGG + chr1_3:62838962-62838981 None:intergenic 45.0%
ACACCTCTCTTAATGGTTGG+TGG - chr1_3:62839041-62839060 Msa0131900:CDS 45.0%
CTTCCACCAACCATTAAGAG+AGG + chr1_3:62839047-62839066 None:intergenic 45.0%
ACGGTGAGCACAGAAACCAA+GGG - chr1_3:62834995-62835014 Msa0131900:three_prime_UTR 50.0%
!! CTGAGATGAAGGCACCAACA+AGG + chr1_3:62835707-62835726 None:intergenic 50.0%
TTGGGAATGGGTGGAGTAAG+AGG - chr1_3:62836186-62836205 Msa0131900:CDS 50.0%
CACTCACTTCTACACGTTCG+GGG - chr1_3:62836873-62836892 Msa0131900:intron 50.0%
CGCGGAGAGAGAAAACTTTG+TGG - chr1_3:62837155-62837174 Msa0131900:intron 50.0%
GACACGTGTTGCAACGCAAT+TGG - chr1_3:62837188-62837207 Msa0131900:intron 50.0%
!! GGGTGTTGAAGGGTGTTGAA+TGG - chr1_3:62837670-62837689 Msa0131900:intron 50.0%
TAGGGGAGGTGGAATTGCTA+AGG - chr1_3:62838020-62838039 Msa0131900:CDS 50.0%
GTCACTGTGCAAACCTTCCA+TGG + chr1_3:62838252-62838271 None:intergenic 50.0%
AGAAGAGGGTCCCTCAGTAT+TGG + chr1_3:62839120-62839139 None:intergenic 50.0%
CTCTGTGTGTGCAGAGTCAA+AGG - chr1_3:62839350-62839369 Msa0131900:five_prime_UTR 50.0%
GACGGTGAGCACAGAAACCA+AGG - chr1_3:62834994-62835013 Msa0131900:three_prime_UTR 55.0%
! TGACGTTTTACGCGCCCTGT+CGG + chr1_3:62837130-62837149 None:intergenic 55.0%
GCGTAAAACGTCAGAGGACG+CGG - chr1_3:62837137-62837156 Msa0131900:intron 55.0%
!! TTTTGAGAGGGTAGGGGAGG+TGG - chr1_3:62838009-62838028 Msa0131900:CDS 55.0%
GCTGTGTAACACCTGAAGGG+TGG + chr1_3:62838518-62838537 None:intergenic 55.0%
! AATGCAACGCGTGGCTCTGC+GGG + chr1_3:62837071-62837090 None:intergenic 60.0%
! GAATGCAACGCGTGGCTCTG+CGG + chr1_3:62837072-62837091 None:intergenic 60.0%
! GTGCATTACACGCGCCGACA+GGG - chr1_3:62837113-62837132 Msa0131900:intron 60.0%
CAGGGCGCGTAAAACGTCAG+AGG - chr1_3:62837131-62837150 Msa0131900:intron 60.0%
CAGGGTGGCTCACCACGATT+AGG + chr1_3:62837907-62837926 None:intergenic 60.0%
! CGTGCATTACACGCGCCGAC+AGG - chr1_3:62837112-62837131 Msa0131900:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 62834969 62839487 62834969 ID=Msa0131900;Name=Msa0131900
chr1_3 mRNA 62834969 62839487 62834969 ID=Msa0131900-mRNA-1;Parent=Msa0131900;Name=Msa0131900-mRNA-1;_AED=0.06;_eAED=0.06;_QI=323|1|1|1|1|1|6|303|610
chr1_3 exon 62834969 62836256 62834969 ID=Msa0131900-mRNA-1:exon:21025;Parent=Msa0131900-mRNA-1
chr1_3 exon 62837772 62837887 62837772 ID=Msa0131900-mRNA-1:exon:21024;Parent=Msa0131900-mRNA-1
chr1_3 exon 62837971 62838393 62837971 ID=Msa0131900-mRNA-1:exon:21023;Parent=Msa0131900-mRNA-1
chr1_3 exon 62838674 62838891 62838674 ID=Msa0131900-mRNA-1:exon:21022;Parent=Msa0131900-mRNA-1
chr1_3 exon 62838991 62839078 62838991 ID=Msa0131900-mRNA-1:exon:21021;Parent=Msa0131900-mRNA-1
chr1_3 exon 62839162 62839487 62839162 ID=Msa0131900-mRNA-1:exon:21020;Parent=Msa0131900-mRNA-1
chr1_3 five_prime_UTR 62839165 62839487 62839165 ID=Msa0131900-mRNA-1:five_prime_utr;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62839162 62839164 62839162 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62838991 62839078 62838991 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62838674 62838891 62838674 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62837971 62838393 62837971 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62837772 62837887 62837772 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 CDS 62835272 62836256 62835272 ID=Msa0131900-mRNA-1:cds;Parent=Msa0131900-mRNA-1
chr1_3 three_prime_UTR 62834969 62835271 62834969 ID=Msa0131900-mRNA-1:three_prime_utr;Parent=Msa0131900-mRNA-1
Gene Sequence

>Msa0131900

ATGGGAGACAAAGAAGTAAAAGAAGAACTCAAACCCATAATTCAATGGAAGAAACAAAAGGGTGGATTTAGAGCTTCCATGTTCATCTTTGTTTTGTCAGCATTGGATAACATGGGTTTTGTGACAAACATGGTGAGCTTAGTACTATACTTTATTGGAGTGATGCACTTTGATCTTTCAAGCTCTGCCAACACTTTGACAAATTTCATGGGCTCAACTTTCTTGCTCTCCCTTGTTGGTGCCTTCATCTCAGATACTTACCTCAACAGATTCACCACATGTCTGGTTTTTGGATCACTCGAAGTTATTGCTTTGGTAATGATCACAATTCAAGCTGCATTGGATAATTTACATCCTAAAGCATGTGGTAAATCAAGTTGTGTGGAAGGAGGCATAGCAGTGATGTTTTACTCATCATTGTGTTTGTATGCTTTGGGAATGGGTGGAGTAAGAGGTTCATTAACAGCATTTGGTGCTAACCAATTTGATGAAAAGGATCCAAATGAAGCAAAAGCACTTGCAACTTTTTTCAATTGGCTTTTACTTAGTTCAACTTTGGGATCAGTTATTGGTGTTACTGGTATTGTTTGGGTTAGTACACAAAAAGCTTGGCATTGGGGATTTTTCATCATAACAGTAGCTTCTTCAATTGGTTTTGTAACACTTGCTATTGGTAAACCTTTTTACCGTATCAAAACTCCTGGTGAAAGTCCTATTTTGAGGATTATTCAGGTTATTGTTGTGGCTTTTAAGAATAGAAAGCTACCACTGCCAGAATCTAATGAACAACTTTATGAAGTGTATAAAGATGCTACTCTAGAGAAGATTGCACACACTAACCAAATGAGGTTTCTAGATAAAGCAGCAATTCTTCAAGAAAATTCTGAACCTCAACAACCATGGAAGGTTTGCACAGTGACACAAGTTGAAGAAGTAAAAATCCTAACAAGAATGTTACCTATATTGGCAAGTACAATTGTAATGAACACATGTTTAGCACAACTTCAAACATTCTCAGTACAACAAGGGAATGCAATGAACCTTAAACTTGGTTCTTTCACAGTACCTGCATCATCCATTCCTGTTATCCCACTAATTTTCTTATGCACATTGATTCCAATTTATGAACTTTTCTTTGTACCATTTATTAGAAAAATCACTCACCACCCTTCAGGTGTTACACAGCTTCAAAGAGTTGGTGTTGGACTAGTACTCTCAGCCATTTCAATGACAATAGCTGGTTTTATAGAAGTTAAAAGAAGAGACCAAGGAAGAAAAGACCCTTCAAAACCAATAAGCTTATTTTGGTTATCTTTTCAATATGCTATATTTGGTATTGCAGACATGTTCACTCTTGTTGGACTATTAGAATTCTTCTACAGAGAAGCACCTTCAACCATGAAATCACTTTCTACTTCATTCACGTTTTTGTCCATGTCACTTGGTTACTTCTTGAGTACTGTTTTTGTTAATGTTATCAACACTGTTACTAAAAGGATCACACCAAGTAAACAAGGTTGGTTACAAGGTTTTGATTTAAATCAAAACAATTTGAACTTGTTTTATTGGTTCTTAGCCATCTTAAGCTGTCTTAATTTCTTTAATTTCCTTTATTGGGCCTCTTGGTACAAGTACAAATCAGAAGATAGTAACAATTCAATGATGGAGAATACAAAGGAATTAGGTGAAACACCTCTCTTAATGGTTGGTGGAAGAAAACATGATGATAAAGCTAAGGCAAAAGAAAGTAGCCAAACTAGTGAAGCCAATACTGAGGGACCCTCTTCTTCTGATGAAACAGATGATGGCAAAGAGAAAGAAAGACATAGATGA

Protein sequence

>Msa0131900

MGDKEVKEELKPIIQWKKQKGGFRASMFIFVLSALDNMGFVTNMVSLVLYFIGVMHFDLSSSANTLTNFMGSTFLLSLVGAFISDTYLNRFTTCLVFGSLEVIALVMITIQAALDNLHPKACGKSSCVEGGIAVMFYSSLCLYALGMGGVRGSLTAFGANQFDEKDPNEAKALATFFNWLLLSSTLGSVIGVTGIVWVSTQKAWHWGFFIITVASSIGFVTLAIGKPFYRIKTPGESPILRIIQVIVVAFKNRKLPLPESNEQLYEVYKDATLEKIAHTNQMRFLDKAAILQENSEPQQPWKVCTVTQVEEVKILTRMLPILASTIVMNTCLAQLQTFSVQQGNAMNLKLGSFTVPASSIPVIPLIFLCTLIPIYELFFVPFIRKITHHPSGVTQLQRVGVGLVLSAISMTIAGFIEVKRRDQGRKDPSKPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSTMKSLSTSFTFLSMSLGYFLSTVFVNVINTVTKRITPSKQGWLQGFDLNQNNLNLFYWFLAILSCLNFFNFLYWASWYKYKSEDSNNSMMENTKELGETPLLMVGGRKHDDKAKAKESSQTSEANTEGPSSSDETDDGKEKERHR*