Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936220 | sp|Q9LHD1|AB15B_ARATH | 70.703 | 256 | 70 | 1 | 52 | 302 | 705 | 960 | 2.54e-122 | 381 |
| Msa0936220 | sp|Q9LHD1|AB15B_ARATH | 28.205 | 195 | 133 | 4 | 83 | 275 | 106 | 295 | 6.13e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936220 | G7KJX5 | 65.625 | 352 | 71 | 4 | 1 | 302 | 613 | 964 | 9.49e-139 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0936220 | 0.807499 | 4.906276e-50 | -8.615850e-47 |
| Msa0024550 | Msa0936220 | 0.833009 | 6.820005e-56 | -8.615850e-47 |
| Msa0027820 | Msa0936220 | 0.803319 | 3.688729e-49 | -8.615850e-47 |
| Msa0061340 | Msa0936220 | 0.819993 | 8.675277e-53 | -8.615850e-47 |
| Msa0120400 | Msa0936220 | 0.822672 | 2.090318e-53 | -8.615850e-47 |
| Msa0633700 | Msa0936220 | 0.807820 | 4.192969e-50 | -8.615850e-47 |
| Msa0731940 | Msa0936220 | 0.801011 | 1.100988e-48 | -8.615850e-47 |
| Msa0733390 | Msa0936220 | 0.815396 | 9.446089e-52 | -8.615850e-47 |
| Msa0737570 | Msa0936220 | 0.805844 | 1.097066e-49 | -8.615850e-47 |
| Msa0740510 | Msa0936220 | 0.812459 | 4.195761e-51 | -8.615850e-47 |
| Msa0760130 | Msa0936220 | 0.814019 | 1.906752e-51 | -8.615850e-47 |
| Msa0767300 | Msa0936220 | 0.804380 | 2.220797e-49 | -8.615850e-47 |
| Msa0816150 | Msa0936220 | 0.801097 | 1.057209e-48 | -8.615850e-47 |
| Msa0820770 | Msa0936220 | 0.811279 | 7.580485e-51 | -8.615850e-47 |
| Msa0828560 | Msa0936220 | 0.809943 | 1.473711e-50 | -8.615850e-47 |
| Msa0152400 | Msa0936220 | 0.820670 | 6.067032e-53 | -8.615850e-47 |
| Msa0157290 | Msa0936220 | 0.808097 | 3.660850e-50 | -8.615850e-47 |
| Msa0188150 | Msa0936220 | 0.801011 | 1.101079e-48 | -8.615850e-47 |
| Msa0212990 | Msa0936220 | 0.832324 | 1.008534e-55 | -8.615850e-47 |
| Msa0213520 | Msa0936220 | 0.802695 | 4.965444e-49 | -8.615850e-47 |
| Msa0218810 | Msa0936220 | 0.810210 | 1.290913e-50 | -8.615850e-47 |
| Msa0220290 | Msa0936220 | -0.800820 | 1.204315e-48 | -8.615850e-47 |
| Msa0224780 | Msa0936220 | 0.823308 | 1.485852e-53 | -8.615850e-47 |
| Msa0237310 | Msa0936220 | 0.804228 | 2.389085e-49 | -8.615850e-47 |
| Msa0367870 | Msa0936220 | 0.813904 | 2.021581e-51 | -8.615850e-47 |
| Msa0376350 | Msa0936220 | 0.816029 | 6.827137e-52 | -8.615850e-47 |
| Msa0376630 | Msa0936220 | 0.802932 | 4.436695e-49 | -8.615850e-47 |
| Msa0378720 | Msa0936220 | 0.817504 | 3.185815e-52 | -8.615850e-47 |
| Msa0388960 | Msa0936220 | 0.814574 | 1.437722e-51 | -8.615850e-47 |
| Msa0392510 | Msa0936220 | 0.805540 | 1.270452e-49 | -8.615850e-47 |
| Msa0393080 | Msa0936220 | 0.821846 | 3.249880e-53 | -8.615850e-47 |
| Msa0395790 | Msa0936220 | 0.805881 | 1.077614e-49 | -8.615850e-47 |
| Msa0406770 | Msa0936220 | 0.803178 | 3.946339e-49 | -8.615850e-47 |
| Msa0410650 | Msa0936220 | 0.801543 | 8.567837e-49 | -8.615850e-47 |
| Msa0422850 | Msa0936220 | 0.804303 | 2.304161e-49 | -8.615850e-47 |
| Msa0422930 | Msa0936220 | 0.804501 | 2.096259e-49 | -8.615850e-47 |
| Msa0424790 | Msa0936220 | 0.807524 | 4.846557e-50 | -8.615850e-47 |
| Msa0439970 | Msa0936220 | 0.804426 | 2.172913e-49 | -8.615850e-47 |
| Msa0440750 | Msa0936220 | 0.816304 | 5.926236e-52 | -8.615850e-47 |
| Msa0443260 | Msa0936220 | 0.803390 | 3.566385e-49 | -8.615850e-47 |
| Msa0460590 | Msa0936220 | 0.802426 | 5.642184e-49 | -8.615850e-47 |
| Msa0464680 | Msa0936220 | 0.812338 | 4.457097e-51 | -8.615850e-47 |
| Msa0467430 | Msa0936220 | 0.801446 | 8.972084e-49 | -8.615850e-47 |
| Msa0474730 | Msa0936220 | 0.807261 | 5.509504e-50 | -8.615850e-47 |
| Msa0253290 | Msa0936220 | 0.807646 | 4.565418e-50 | -8.615850e-47 |
| Msa0258310 | Msa0936220 | 0.819667 | 1.029625e-52 | -8.615850e-47 |
| Msa0259500 | Msa0936220 | 0.810705 | 1.009290e-50 | -8.615850e-47 |
| Msa0261340 | Msa0936220 | 0.805639 | 1.211402e-49 | -8.615850e-47 |
| Msa0274730 | Msa0936220 | 0.801684 | 8.016121e-49 | -8.615850e-47 |
| Msa0287650 | Msa0936220 | 0.807808 | 4.217974e-50 | -8.615850e-47 |
| Msa0300270 | Msa0936220 | 0.817557 | 3.100437e-52 | -8.615850e-47 |
| Msa0315530 | Msa0936220 | 0.803712 | 3.058972e-49 | -8.615850e-47 |
| Msa0330340 | Msa0936220 | 0.826426 | 2.730009e-54 | -8.615850e-47 |
| Msa0337700 | Msa0936220 | 0.809382 | 1.945253e-50 | -8.615850e-47 |
| Msa0341540 | Msa0936220 | 0.806953 | 6.404578e-50 | -8.615850e-47 |
| Msa0345970 | Msa0936220 | 0.807960 | 3.915079e-50 | -8.615850e-47 |
| Msa0357020 | Msa0936220 | 0.807763 | 4.313074e-50 | -8.615850e-47 |
| Msa0360210 | Msa0936220 | 0.802380 | 5.767741e-49 | -8.615850e-47 |
| Msa0363200 | Msa0936220 | 0.818144 | 2.285335e-52 | -8.615850e-47 |
| Msa0488560 | Msa0936220 | 0.824772 | 6.733031e-54 | -8.615850e-47 |
| Msa0490730 | Msa0936220 | -0.805225 | 1.479089e-49 | -8.615850e-47 |
| Msa0503060 | Msa0936220 | 0.801025 | 1.093914e-48 | -8.615850e-47 |
| Msa0516170 | Msa0936220 | 0.811564 | 6.574615e-51 | -8.615850e-47 |
| Msa0844240 | Msa0936220 | 0.804455 | 2.142371e-49 | -8.615850e-47 |
| Msa0844490 | Msa0936220 | 0.808008 | 3.824404e-50 | -8.615850e-47 |
| Msa0861090 | Msa0936220 | 0.814252 | 1.693916e-51 | -8.615850e-47 |
| Msa0861510 | Msa0936220 | 0.816846 | 4.480860e-52 | -8.615850e-47 |
| Msa0861530 | Msa0936220 | 0.816386 | 5.681243e-52 | -8.615850e-47 |
| Msa0861600 | Msa0936220 | 0.821011 | 5.063625e-53 | -8.615850e-47 |
| Msa0870550 | Msa0936220 | 0.865407 | 6.038724e-65 | -8.615850e-47 |
| Msa0870610 | Msa0936220 | 0.801134 | 1.039160e-48 | -8.615850e-47 |
| Msa0875290 | Msa0936220 | 0.821763 | 3.396469e-53 | -8.615850e-47 |
| Msa0880140 | Msa0936220 | 0.803935 | 2.748886e-49 | -8.615850e-47 |
| Msa0900620 | Msa0936220 | 0.801274 | 9.727864e-49 | -8.615850e-47 |
| Msa0903690 | Msa0936220 | 0.853739 | 1.958247e-61 | -8.615850e-47 |
| Msa0926890 | Msa0936220 | 0.812499 | 4.111011e-51 | -8.615850e-47 |
| Msa0936220 | Msa0964840 | 0.813721 | 2.217591e-51 | -8.615850e-47 |
| Msa0936220 | Msa0967380 | 0.838551 | 2.688226e-57 | -8.615850e-47 |
| Msa0936220 | Msa0969520 | 0.809895 | 1.509419e-50 | -8.615850e-47 |
| Msa0936220 | Msa0972100 | 0.820125 | 8.089832e-53 | -8.615850e-47 |
| Msa0936220 | Msa0973160 | 0.846757 | 1.776914e-59 | -8.615850e-47 |
| Msa0936220 | Msa1004800 | 0.802425 | 5.644788e-49 | -8.615850e-47 |
| Msa0936220 | Msa1031930 | 0.813674 | 2.270960e-51 | -8.615850e-47 |
| Msa0936220 | Msa1041670 | 0.809580 | 1.763696e-50 | -8.615850e-47 |
| Msa0936220 | Msa1043370 | 0.836215 | 1.066322e-56 | -8.615850e-47 |
| Msa0936220 | Msa1121490 | 0.806190 | 9.277426e-50 | -8.615850e-47 |
| Msa0936220 | Msa1122520 | 0.800277 | 1.553925e-48 | -8.615850e-47 |
| Msa0936220 | Msa1137570 | 0.810985 | 8.779967e-51 | -8.615850e-47 |
| Msa0936220 | Msa1139890 | 0.810779 | 9.725969e-51 | -8.615850e-47 |
| Msa0936220 | Msa1151910 | 0.813582 | 2.379164e-51 | -8.615850e-47 |
| Msa0936220 | Msa1158310 | 0.800596 | 1.338468e-48 | -8.615850e-47 |
| Msa0936220 | Msa1166560 | 0.804696 | 1.908747e-49 | -8.615850e-47 |
| Msa0936220 | Msa1167380 | 0.800100 | 1.688871e-48 | -8.615850e-47 |
| Msa0936220 | Msa1193170 | 0.805309 | 1.420750e-49 | -8.615850e-47 |
| Msa0936220 | Msa1199570 | 0.815348 | 9.680940e-52 | -8.615850e-47 |
| Msa0936220 | Msa1238820 | 0.812933 | 3.304265e-51 | -8.615850e-47 |
| Msa0936220 | Msa1267770 | 0.801510 | 8.701234e-49 | -8.615850e-47 |
| Msa0936220 | Msa1298370 | 0.800592 | 1.340481e-48 | -8.615850e-47 |
| Msa0936220 | Msa1298810 | 0.801423 | 9.067260e-49 | -8.615850e-47 |
| Msa0936220 | Msa1313150 | 0.806847 | 6.742908e-50 | -8.615850e-47 |
| Msa0936220 | Msa1328640 | 0.800033 | 1.741959e-48 | -8.615850e-47 |
| Msa0936220 | Msa1328710 | 0.809859 | 1.536007e-50 | -8.615850e-47 |
| Msa0936220 | Msa1330420 | 0.820483 | 6.699355e-53 | -8.615850e-47 |
| Msa0936220 | Msa1332000 | 0.810739 | 9.922086e-51 | -8.615850e-47 |
| Msa0936220 | Msa1408620 | -0.815932 | 7.175635e-52 | -8.615850e-47 |
| Msa0936220 | Msa1418260 | 0.801872 | 7.334039e-49 | -8.615850e-47 |
| Msa0936220 | Msa1423880 | 0.811207 | 7.858194e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936220 | MtrunA17_Chr6g0452111 | 82.558 | 258 | 40 | 1 | 50 | 302 | 726 | 983 | 2.27e-142 | 432 |
| Msa0936220 | MtrunA17_Chr6g0452111 | 81.928 | 83 | 11 | 2 | 1 | 83 | 620 | 698 | 3.10e-37 | 140 |
| Msa0936220 | MtrunA17_Chr6g0452111 | 23.980 | 196 | 140 | 4 | 83 | 275 | 115 | 304 | 2.99e-12 | 67.4 |
| Msa0936220 | MtrunA17_Chr6g0452171 | 82.171 | 258 | 41 | 2 | 50 | 302 | 728 | 985 | 1.40e-141 | 430 |
| Msa0936220 | MtrunA17_Chr6g0452171 | 20.725 | 193 | 150 | 2 | 83 | 275 | 108 | 297 | 2.81e-11 | 64.3 |
| Msa0936220 | MtrunA17_Chr6g0452141 | 79.457 | 258 | 48 | 1 | 50 | 302 | 725 | 982 | 3.59e-138 | 421 |
| Msa0936220 | MtrunA17_Chr6g0452041 | 79.457 | 258 | 48 | 1 | 50 | 302 | 727 | 984 | 1.57e-136 | 417 |
| Msa0936220 | MtrunA17_Chr6g0452041 | 21.762 | 193 | 148 | 2 | 83 | 275 | 108 | 297 | 9.78e-12 | 65.9 |
| Msa0936220 | MtrunA17_Chr6g0452061 | 75.194 | 258 | 52 | 3 | 50 | 302 | 244 | 494 | 2.05e-128 | 384 |
| Msa0936220 | MtrunA17_Chr6g0452061 | 78.313 | 83 | 18 | 0 | 1 | 83 | 134 | 216 | 1.38e-29 | 118 |
| Msa0936220 | MtrunA17_Chr6g0451881 | 70.930 | 258 | 69 | 3 | 51 | 302 | 715 | 972 | 8.94e-118 | 367 |
| Msa0936220 | MtrunA17_Chr6g0451881 | 54.217 | 83 | 29 | 2 | 1 | 83 | 613 | 686 | 2.88e-16 | 79.3 |
| Msa0936220 | MtrunA17_Chr6g0451881 | 22.798 | 193 | 146 | 2 | 83 | 275 | 108 | 297 | 1.38e-11 | 65.1 |
| Msa0936220 | MtrunA17_Chr6g0451911 | 72.807 | 228 | 61 | 1 | 76 | 302 | 753 | 980 | 1.42e-110 | 347 |
| Msa0936220 | MtrunA17_Chr6g0451911 | 20.379 | 211 | 163 | 3 | 83 | 291 | 108 | 315 | 3.72e-12 | 67.0 |
| Msa0936220 | MtrunA17_Chr7g0233901 | 64.981 | 257 | 85 | 2 | 51 | 302 | 704 | 960 | 3.26e-109 | 343 |
| Msa0936220 | MtrunA17_Chr6g0452071 | 86.932 | 176 | 22 | 1 | 127 | 302 | 4 | 178 | 4.57e-105 | 314 |
| Msa0936220 | MtrunA17_Chr6g0486841 | 55.947 | 227 | 100 | 0 | 76 | 302 | 739 | 965 | 3.59e-84 | 275 |
| Msa0936220 | MtrunA17_Chr6g0486841 | 23.333 | 210 | 152 | 4 | 89 | 292 | 111 | 317 | 7.14e-13 | 69.3 |
| Msa0936220 | MtrunA17_Chr4g0041871 | 52.423 | 227 | 108 | 0 | 76 | 302 | 744 | 970 | 1.61e-80 | 265 |
| Msa0936220 | MtrunA17_Chr3g0123411 | 51.556 | 225 | 109 | 0 | 78 | 302 | 645 | 869 | 2.70e-77 | 255 |
| Msa0936220 | MtrunA17_Chr5g0410921 | 35.714 | 224 | 144 | 0 | 79 | 302 | 733 | 956 | 7.06e-44 | 160 |
| Msa0936220 | MtrunA17_Chr5g0410921 | 23.853 | 218 | 155 | 5 | 81 | 293 | 101 | 312 | 1.34e-14 | 74.3 |
| Msa0936220 | MtrunA17_Chr7g0264631 | 32.579 | 221 | 149 | 0 | 82 | 302 | 825 | 1045 | 1.58e-40 | 150 |
| Msa0936220 | MtrunA17_Chr7g0264631 | 24.057 | 212 | 156 | 2 | 81 | 288 | 171 | 381 | 2.93e-15 | 76.3 |
| Msa0936220 | MtrunA17_Chr6g0453051 | 31.718 | 227 | 155 | 0 | 76 | 302 | 747 | 973 | 1.60e-40 | 150 |
| Msa0936220 | MtrunA17_Chr6g0453051 | 25.926 | 189 | 139 | 1 | 81 | 269 | 108 | 295 | 1.76e-18 | 85.9 |
| Msa0936220 | MtrunA17_Chr8g0366481 | 32.159 | 227 | 154 | 0 | 76 | 302 | 127 | 353 | 2.98e-39 | 145 |
| Msa0936220 | MtrunA17_Chr4g0069401 | 31.416 | 226 | 155 | 0 | 77 | 302 | 774 | 999 | 3.29e-38 | 143 |
| Msa0936220 | MtrunA17_Chr4g0069401 | 23.786 | 206 | 153 | 3 | 83 | 287 | 120 | 322 | 5.03e-19 | 87.4 |
| Msa0936220 | MtrunA17_Chr1g0156821 | 31.718 | 227 | 155 | 0 | 76 | 302 | 733 | 959 | 1.74e-37 | 141 |
| Msa0936220 | MtrunA17_Chr1g0156821 | 24.091 | 220 | 166 | 1 | 83 | 302 | 120 | 338 | 9.94e-20 | 89.7 |
| Msa0936220 | MtrunA17_Chr2g0285311 | 31.696 | 224 | 153 | 0 | 79 | 302 | 767 | 990 | 6.98e-37 | 139 |
| Msa0936220 | MtrunA17_Chr2g0285311 | 27.885 | 208 | 146 | 3 | 83 | 289 | 116 | 320 | 2.22e-22 | 97.4 |
| Msa0936220 | MtrunA17_Chr2g0285301 | 30.672 | 238 | 165 | 0 | 65 | 302 | 749 | 986 | 1.51e-36 | 139 |
| Msa0936220 | MtrunA17_Chr2g0285301 | 26.168 | 214 | 143 | 4 | 83 | 287 | 106 | 313 | 5.01e-14 | 72.8 |
| Msa0936220 | MtrunA17_Chr4g0069411 | 33.182 | 220 | 147 | 0 | 77 | 296 | 790 | 1009 | 1.62e-36 | 139 |
| Msa0936220 | MtrunA17_Chr4g0069411 | 23.902 | 205 | 154 | 2 | 83 | 286 | 143 | 346 | 3.51e-16 | 79.0 |
| Msa0936220 | MtrunA17_Chr2g0285191 | 32.609 | 230 | 147 | 2 | 77 | 302 | 793 | 1018 | 1.87e-35 | 135 |
| Msa0936220 | MtrunA17_Chr2g0285191 | 26.214 | 206 | 148 | 3 | 83 | 287 | 145 | 347 | 3.77e-22 | 96.7 |
| Msa0936220 | MtrunA17_Chr3g0138211 | 33.182 | 220 | 147 | 0 | 77 | 296 | 766 | 985 | 1.97e-35 | 135 |
| Msa0936220 | MtrunA17_Chr4g0069361 | 29.596 | 223 | 157 | 0 | 77 | 299 | 776 | 998 | 2.60e-35 | 135 |
| Msa0936220 | MtrunA17_Chr4g0069361 | 25.243 | 206 | 150 | 3 | 83 | 287 | 125 | 327 | 1.56e-20 | 92.0 |
| Msa0936220 | MtrunA17_Chr4g0069351 | 28.700 | 223 | 159 | 0 | 77 | 299 | 776 | 998 | 4.51e-35 | 134 |
| Msa0936220 | MtrunA17_Chr4g0069351 | 22.439 | 205 | 157 | 2 | 83 | 286 | 125 | 328 | 9.29e-20 | 89.7 |
| Msa0936220 | MtrunA17_Chr4g0039821 | 28.854 | 253 | 175 | 1 | 53 | 300 | 745 | 997 | 5.78e-35 | 134 |
| Msa0936220 | MtrunA17_Chr4g0039821 | 23.415 | 205 | 155 | 2 | 83 | 286 | 123 | 326 | 1.33e-18 | 86.3 |
| Msa0936220 | MtrunA17_Chr1g0180601 | 32.579 | 221 | 149 | 0 | 82 | 302 | 799 | 1019 | 3.70e-34 | 132 |
| Msa0936220 | MtrunA17_Chr1g0180601 | 25.263 | 190 | 141 | 1 | 81 | 270 | 144 | 332 | 2.37e-16 | 79.7 |
| Msa0936220 | MtrunA17_Chr6g0481921 | 30.531 | 226 | 157 | 0 | 77 | 302 | 667 | 892 | 4.65e-34 | 131 |
| Msa0936220 | MtrunA17_Chr6g0481921 | 29.126 | 206 | 142 | 3 | 83 | 287 | 18 | 220 | 9.33e-24 | 101 |
| Msa0936220 | MtrunA17_Chr3g0119381 | 34.071 | 226 | 149 | 0 | 77 | 302 | 797 | 1022 | 6.52e-34 | 131 |
| Msa0936220 | MtrunA17_Chr3g0119381 | 22.596 | 208 | 158 | 2 | 83 | 289 | 145 | 350 | 1.50e-21 | 95.1 |
| Msa0936220 | MtrunA17_Chr8g0344651 | 32.420 | 219 | 147 | 1 | 66 | 284 | 971 | 1188 | 1.03e-33 | 130 |
| Msa0936220 | MtrunA17_Chr8g0344651 | 21.698 | 212 | 165 | 1 | 82 | 293 | 344 | 554 | 1.02e-17 | 83.6 |
| Msa0936220 | MtrunA17_Chr1g0193991 | 31.858 | 226 | 154 | 0 | 77 | 302 | 784 | 1009 | 1.11e-32 | 127 |
| Msa0936220 | MtrunA17_Chr1g0193991 | 24.339 | 189 | 141 | 2 | 83 | 270 | 136 | 323 | 5.16e-20 | 90.5 |
| Msa0936220 | MtrunA17_Chr1g0212701 | 28.365 | 208 | 149 | 0 | 76 | 283 | 886 | 1093 | 5.15e-29 | 117 |
| Msa0936220 | MtrunA17_Chr1g0212701 | 24.064 | 187 | 141 | 1 | 83 | 269 | 149 | 334 | 1.40e-13 | 71.2 |
| Msa0936220 | MtrunA17_Chr7g0222781 | 26.442 | 208 | 153 | 0 | 76 | 283 | 894 | 1101 | 5.46e-26 | 108 |
| Msa0936220 | MtrunA17_Chr7g0222781 | 24.064 | 187 | 141 | 1 | 83 | 269 | 155 | 340 | 3.91e-14 | 73.2 |
| Msa0936220 | MtrunA17_Chr3g0128381 | 27.451 | 204 | 140 | 2 | 69 | 268 | 122 | 321 | 7.67e-23 | 98.6 |
| Msa0936220 | MtrunA17_Chr1g0194031 | 23.280 | 189 | 143 | 2 | 83 | 270 | 131 | 318 | 5.75e-19 | 87.4 |
| Msa0936220 | MtrunA17_Chr1g0194031 | 37.234 | 94 | 59 | 0 | 65 | 158 | 767 | 860 | 1.13e-15 | 77.4 |
| Msa0936220 | MtrunA17_Chr8g0366451 | 21.127 | 213 | 167 | 1 | 81 | 293 | 60 | 271 | 6.16e-13 | 68.9 |
| Msa0936220 | MtrunA17_Chr6g0452091 | 23.810 | 189 | 137 | 4 | 89 | 275 | 43 | 226 | 2.70e-12 | 65.5 |
| Msa0936220 | MtrunA17_Chr3g0128391 | 20.635 | 189 | 149 | 1 | 81 | 269 | 2 | 189 | 4.22e-12 | 66.6 |
| Msa0936220 | MtrunA17_Chr4g0061601 | 24.201 | 219 | 156 | 5 | 77 | 291 | 130 | 342 | 2.12e-11 | 64.3 |
| Msa0936220 | MtrunA17_Chr1g0194001 | 29.091 | 110 | 78 | 0 | 193 | 302 | 3 | 112 | 2.58e-11 | 63.5 |
| Msa0936220 | MtrunA17_Chr6g0452051 | 22.564 | 195 | 144 | 4 | 83 | 275 | 29 | 218 | 8.92e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936220 | AT3G28345.1 | 70.703 | 256 | 70 | 1 | 52 | 302 | 705 | 960 | 2.58e-123 | 381 |
| Msa0936220 | AT3G28345.1 | 28.205 | 195 | 133 | 4 | 83 | 275 | 106 | 295 | 6.23e-18 | 84.7 |
| Msa0936220 | AT3G28380.1 | 65.639 | 227 | 78 | 0 | 76 | 302 | 734 | 960 | 1.24e-102 | 326 |
| Msa0936220 | AT3G28380.1 | 27.513 | 189 | 126 | 4 | 83 | 266 | 106 | 288 | 6.40e-16 | 78.6 |
| Msa0936220 | AT3G28415.1 | 65.198 | 227 | 79 | 0 | 76 | 302 | 715 | 941 | 8.00e-102 | 323 |
| Msa0936220 | AT3G28415.1 | 25.664 | 226 | 153 | 6 | 69 | 287 | 71 | 288 | 1.56e-17 | 83.6 |
| Msa0936220 | AT3G28415.2 | 65.198 | 227 | 79 | 0 | 76 | 302 | 723 | 949 | 1.27e-101 | 323 |
| Msa0936220 | AT3G28415.2 | 25.943 | 212 | 142 | 6 | 83 | 287 | 93 | 296 | 3.13e-16 | 79.7 |
| Msa0936220 | AT3G28360.1 | 64.758 | 227 | 80 | 0 | 76 | 302 | 720 | 946 | 9.53e-101 | 320 |
| Msa0936220 | AT3G28360.1 | 25.773 | 194 | 132 | 5 | 83 | 270 | 93 | 280 | 5.82e-16 | 79.0 |
| Msa0936220 | AT3G28390.1 | 62.555 | 227 | 85 | 0 | 76 | 302 | 719 | 945 | 1.76e-96 | 309 |
| Msa0936220 | AT3G28390.1 | 25.714 | 210 | 144 | 5 | 83 | 287 | 94 | 296 | 5.73e-17 | 82.0 |
| Msa0936220 | AT1G10680.1 | 35.556 | 225 | 145 | 0 | 78 | 302 | 725 | 949 | 2.08e-44 | 162 |
| Msa0936220 | AT1G10680.1 | 21.127 | 213 | 167 | 1 | 81 | 293 | 110 | 321 | 1.15e-13 | 72.0 |
| Msa0936220 | AT1G10680.2 | 35.556 | 225 | 145 | 0 | 78 | 302 | 725 | 949 | 2.52e-44 | 161 |
| Msa0936220 | AT1G10680.2 | 21.127 | 213 | 167 | 1 | 81 | 293 | 110 | 321 | 1.24e-13 | 72.0 |
| Msa0936220 | AT4G25960.1 | 34.375 | 224 | 147 | 0 | 79 | 302 | 774 | 997 | 9.77e-43 | 157 |
| Msa0936220 | AT4G25960.1 | 20.657 | 213 | 168 | 1 | 81 | 293 | 146 | 357 | 1.12e-13 | 72.0 |
| Msa0936220 | AT1G28010.1 | 33.921 | 227 | 150 | 0 | 76 | 302 | 745 | 971 | 1.08e-42 | 157 |
| Msa0936220 | AT1G28010.1 | 24.171 | 211 | 159 | 1 | 83 | 293 | 119 | 328 | 9.11e-20 | 90.1 |
| Msa0936220 | AT2G47000.6 | 33.945 | 218 | 144 | 0 | 66 | 283 | 771 | 988 | 2.47e-40 | 150 |
| Msa0936220 | AT2G47000.6 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 3.72e-18 | 85.5 |
| Msa0936220 | AT2G47000.5 | 33.945 | 218 | 144 | 0 | 66 | 283 | 771 | 988 | 2.47e-40 | 150 |
| Msa0936220 | AT2G47000.5 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 3.72e-18 | 85.5 |
| Msa0936220 | AT2G47000.1 | 33.945 | 218 | 144 | 0 | 66 | 283 | 771 | 988 | 2.47e-40 | 150 |
| Msa0936220 | AT2G47000.1 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 3.72e-18 | 85.5 |
| Msa0936220 | AT1G27940.2 | 32.599 | 227 | 153 | 0 | 76 | 302 | 529 | 755 | 2.59e-40 | 150 |
| Msa0936220 | AT2G47000.2 | 33.945 | 218 | 144 | 0 | 66 | 283 | 771 | 988 | 2.64e-40 | 150 |
| Msa0936220 | AT2G47000.2 | 25.481 | 208 | 151 | 3 | 83 | 289 | 131 | 335 | 4.32e-18 | 85.1 |
| Msa0936220 | AT1G27940.1 | 32.599 | 227 | 153 | 0 | 76 | 302 | 743 | 969 | 2.86e-40 | 150 |
| Msa0936220 | AT1G27940.1 | 23.636 | 220 | 167 | 1 | 83 | 302 | 118 | 336 | 1.89e-19 | 89.4 |
| Msa0936220 | AT2G47000.4 | 33.945 | 218 | 144 | 0 | 66 | 283 | 771 | 988 | 3.00e-40 | 150 |
| Msa0936220 | AT2G47000.4 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 4.31e-18 | 85.1 |
| Msa0936220 | AT3G62150.3 | 35.122 | 205 | 133 | 0 | 79 | 283 | 794 | 998 | 4.65e-40 | 149 |
| Msa0936220 | AT3G62150.3 | 23.415 | 205 | 155 | 2 | 83 | 286 | 150 | 353 | 9.49e-22 | 95.9 |
| Msa0936220 | AT3G62150.2 | 35.122 | 205 | 133 | 0 | 79 | 283 | 794 | 998 | 4.65e-40 | 149 |
| Msa0936220 | AT3G62150.2 | 23.415 | 205 | 155 | 2 | 83 | 286 | 150 | 353 | 9.49e-22 | 95.9 |
| Msa0936220 | AT3G62150.1 | 35.122 | 205 | 133 | 0 | 79 | 283 | 794 | 998 | 4.65e-40 | 149 |
| Msa0936220 | AT3G62150.1 | 23.415 | 205 | 155 | 2 | 83 | 286 | 150 | 353 | 9.49e-22 | 95.9 |
| Msa0936220 | AT1G02520.1 | 33.043 | 230 | 146 | 2 | 77 | 302 | 772 | 997 | 4.86e-40 | 149 |
| Msa0936220 | AT1G02520.1 | 25.397 | 189 | 139 | 2 | 83 | 270 | 128 | 315 | 2.90e-20 | 91.7 |
| Msa0936220 | AT1G02520.2 | 33.043 | 230 | 146 | 2 | 77 | 302 | 772 | 997 | 4.86e-40 | 149 |
| Msa0936220 | AT1G02520.2 | 25.397 | 189 | 139 | 2 | 83 | 270 | 128 | 315 | 2.90e-20 | 91.7 |
| Msa0936220 | AT1G02520.3 | 33.043 | 230 | 146 | 2 | 77 | 302 | 772 | 997 | 4.86e-40 | 149 |
| Msa0936220 | AT1G02520.3 | 25.397 | 189 | 139 | 2 | 83 | 270 | 128 | 315 | 2.90e-20 | 91.7 |
| Msa0936220 | AT3G28860.1 | 32.159 | 227 | 154 | 0 | 76 | 302 | 749 | 975 | 6.76e-40 | 149 |
| Msa0936220 | AT3G28860.1 | 25.397 | 189 | 140 | 1 | 81 | 269 | 110 | 297 | 3.15e-17 | 82.8 |
| Msa0936220 | AT2G47000.3 | 33.645 | 214 | 142 | 0 | 65 | 278 | 770 | 983 | 2.86e-39 | 147 |
| Msa0936220 | AT2G47000.3 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 3.36e-18 | 85.5 |
| Msa0936220 | AT2G47000.7 | 33.645 | 214 | 142 | 0 | 65 | 278 | 770 | 983 | 2.86e-39 | 147 |
| Msa0936220 | AT2G47000.7 | 25.728 | 206 | 149 | 3 | 83 | 287 | 131 | 333 | 3.36e-18 | 85.5 |
| Msa0936220 | AT1G02530.1 | 31.304 | 230 | 150 | 2 | 77 | 302 | 767 | 992 | 4.03e-36 | 138 |
| Msa0936220 | AT1G02530.1 | 24.868 | 189 | 140 | 2 | 83 | 270 | 115 | 302 | 1.76e-18 | 86.3 |
| Msa0936220 | AT4G01820.1 | 30.973 | 226 | 156 | 0 | 77 | 302 | 724 | 949 | 1.07e-35 | 136 |
| Msa0936220 | AT4G01820.1 | 24.352 | 193 | 144 | 2 | 83 | 274 | 95 | 286 | 2.87e-20 | 91.7 |
| Msa0936220 | AT1G02530.2 | 33.503 | 197 | 123 | 2 | 77 | 269 | 767 | 959 | 1.02e-34 | 134 |
| Msa0936220 | AT1G02530.2 | 24.868 | 189 | 140 | 2 | 83 | 270 | 115 | 302 | 1.65e-18 | 86.3 |
| Msa0936220 | AT2G36910.1 | 33.032 | 221 | 148 | 0 | 82 | 302 | 768 | 988 | 1.62e-34 | 133 |
| Msa0936220 | AT2G36910.1 | 24.227 | 194 | 145 | 2 | 83 | 276 | 115 | 306 | 4.30e-14 | 73.2 |
| Msa0936220 | AT4G01820.2 | 30.693 | 202 | 140 | 0 | 77 | 278 | 724 | 925 | 3.04e-32 | 126 |
| Msa0936220 | AT4G01820.2 | 24.352 | 193 | 144 | 2 | 83 | 274 | 95 | 286 | 3.05e-20 | 91.7 |
| Msa0936220 | AT4G01830.2 | 30.973 | 226 | 156 | 0 | 77 | 302 | 491 | 716 | 9.36e-32 | 125 |
| Msa0936220 | AT4G01830.1 | 30.973 | 226 | 156 | 0 | 77 | 302 | 725 | 950 | 1.57e-31 | 124 |
| Msa0936220 | AT4G01830.1 | 20.853 | 211 | 166 | 1 | 83 | 293 | 100 | 309 | 6.84e-17 | 81.6 |
| Msa0936220 | AT2G39480.2 | 31.500 | 200 | 129 | 2 | 76 | 271 | 717 | 912 | 8.21e-28 | 114 |
| Msa0936220 | AT2G39480.1 | 31.500 | 200 | 129 | 2 | 76 | 271 | 897 | 1092 | 8.36e-28 | 114 |
| Msa0936220 | AT2G39480.1 | 22.778 | 180 | 138 | 1 | 83 | 262 | 161 | 339 | 9.80e-13 | 69.3 |
| Msa0936220 | AT3G55320.1 | 30.500 | 200 | 131 | 2 | 76 | 271 | 898 | 1093 | 5.99e-27 | 111 |
| Msa0936220 | AT3G55320.1 | 21.463 | 205 | 160 | 1 | 83 | 287 | 163 | 366 | 1.34e-13 | 71.6 |
| Msa0936220 | AT5G46540.1 | 27.074 | 229 | 161 | 2 | 77 | 302 | 745 | 970 | 1.02e-24 | 104 |
| Msa0936220 | AT5G46540.1 | 22.798 | 193 | 147 | 2 | 83 | 274 | 104 | 295 | 7.77e-21 | 93.2 |
| Msa0936220 | AT4G18050.2 | 30.396 | 227 | 135 | 3 | 77 | 299 | 758 | 965 | 2.44e-24 | 103 |
| Msa0936220 | AT4G18050.2 | 23.267 | 202 | 153 | 2 | 83 | 283 | 112 | 312 | 5.59e-17 | 82.0 |
| Msa0936220 | AT4G18050.1 | 30.396 | 227 | 135 | 3 | 77 | 299 | 748 | 955 | 2.55e-24 | 103 |
| Msa0936220 | AT4G18050.1 | 23.267 | 202 | 153 | 2 | 83 | 283 | 102 | 302 | 5.90e-17 | 82.0 |
Find 47 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACCACATTGGCTTCTT+TGG | 0.199950 | 6_3:+6908056 | None:intergenic |
| GTAGTTATGCTTTGAGCTTT+TGG | 0.248071 | 6_3:-6906915 | Msa0936220:CDS |
| ACATTCATCTTGGGCCTTGA+TGG | 0.293255 | 6_3:+6907110 | None:intergenic |
| ATTAGACAATCTTGGTTTGC+TGG | 0.327051 | 6_3:-6906973 | Msa0936220:CDS |
| CAAAGATTGTTGGCAATGAA+TGG | 0.336210 | 6_3:-6908417 | Msa0936220:CDS |
| TTTCATGACTTGGGCCTTGT+TGG | 0.338132 | 6_3:+6906998 | None:intergenic |
| ACTTACACAGGTAAGATCTT+TGG | 0.352605 | 6_3:-6907304 | Msa0936220:intron |
| ATCTTTGGTGGGTGATAGAT+TGG | 0.365517 | 6_3:-6907289 | Msa0936220:CDS |
| TTCATGACTTGGGCCTTGTT+GGG | 0.374959 | 6_3:+6906999 | None:intergenic |
| CAATCTTGGTTTGCTGGCAT+TGG | 0.391379 | 6_3:-6906967 | Msa0936220:CDS |
| TAGAAACAACATATGATAAC+TGG | 0.396082 | 6_3:+6907171 | None:intergenic |
| ATGAAAGTATTAGACAATCT+TGG | 0.404477 | 6_3:-6906981 | Msa0936220:CDS |
| ATATTATAGCTTTGCTTACA+TGG | 0.408057 | 6_3:-6908193 | Msa0936220:intron |
| TGGGCCTTGATGGCTTTGCT+TGG | 0.409169 | 6_3:+6907120 | None:intergenic |
| TGTAGTTGATGATGAGGATA+AGG | 0.415130 | 6_3:-6908481 | Msa0936220:CDS |
| TCCTTCCTTTCAAAGATTGT+TGG | 0.416339 | 6_3:-6908427 | Msa0936220:CDS |
| GTCTAATACTTTCATGACTT+GGG | 0.435511 | 6_3:+6906989 | None:intergenic |
| TCATATGTTGTTTCTATACA+AGG | 0.438419 | 6_3:-6907164 | Msa0936220:CDS |
| AACTTCAAAAGTAAGTATCT+TGG | 0.447156 | 6_3:+6908131 | None:intergenic |
| GTTGACTTAAAAGAGCTAGA+AGG | 0.449939 | 6_3:+6908567 | None:intergenic |
| TGTCTAATACTTTCATGACT+TGG | 0.454780 | 6_3:+6906988 | None:intergenic |
| GATGAAGATCAAAATTCTAC+CGG | 0.478065 | 6_3:-6908099 | Msa0936220:CDS |
| GCCAACAATCTTTGAAAGGA+AGG | 0.492056 | 6_3:+6908426 | None:intergenic |
| CATTGCCAACAATCTTTGAA+AGG | 0.495848 | 6_3:+6908422 | None:intergenic |
| AAGTCTAGAGCAAACAGAAC+CGG | 0.509465 | 6_3:+6908080 | None:intergenic |
| GTAGTAATAGCATTCACAAT+GGG | 0.510001 | 6_3:-6907240 | Msa0936220:CDS |
| TACACAGGTAAGATCTTTGG+TGG | 0.510332 | 6_3:-6907301 | Msa0936220:intron |
| TGGGAGAGTACTTGACTAAG+AGG | 0.513417 | 6_3:-6908173 | Msa0936220:CDS |
| AAACATGTTTACTTCCACTC+TGG | 0.518562 | 6_3:+6908393 | None:intergenic |
| TAAATTTGTAGTTGATGATG+AGG | 0.518893 | 6_3:-6908487 | Msa0936220:CDS |
| CAAGGTTATATCTCAGCTAA+GGG | 0.526283 | 6_3:-6906871 | Msa0936220:CDS |
| GCAAGGTTATATCTCAGCTA+AGG | 0.528905 | 6_3:-6906872 | Msa0936220:CDS |
| ATGACGAATGATCTTGCTAA+AGG | 0.533890 | 6_3:-6906787 | None:intergenic |
| GGAAAAGTTATTGCTGATGC+TGG | 0.535323 | 6_3:-6906814 | Msa0936220:CDS |
| AATGCCAAGCAAAGCCATCA+AGG | 0.541360 | 6_3:-6907124 | Msa0936220:CDS |
| TATTATAGCTTTGCTTACAT+GGG | 0.544663 | 6_3:-6908192 | Msa0936220:intron |
| GGGTGATAGATTGGCTCTAG+TGG | 0.574754 | 6_3:-6907280 | Msa0936220:CDS |
| CAATGGGACTAATCATTGCA+TGG | 0.598709 | 6_3:-6907224 | Msa0936220:CDS |
| GGTGGGAAACTTGTGTCGCA+AGG | 0.628793 | 6_3:-6906889 | Msa0936220:CDS |
| AGTAGTAATAGCATTCACAA+TGG | 0.643891 | 6_3:-6907241 | Msa0936220:CDS |
| TTGAACTGCTATCATAACAA+TGG | 0.647321 | 6_3:+6907194 | None:intergenic |
| GGGAGAGTACTTGACTAAGA+GGG | 0.657633 | 6_3:-6908172 | Msa0936220:CDS |
| ACTTGCCAAAGAAGCCAATG+TGG | 0.684674 | 6_3:-6908061 | Msa0936220:intron |
| ACACAGGTAAGATCTTTGGT+GGG | 0.690517 | 6_3:-6907300 | Msa0936220:intron |
| ACTGAGGAGACATACCACAT+TGG | 0.694166 | 6_3:+6908047 | None:intergenic |
| AAGGTTATATCTCAGCTAAG+GGG | 0.702652 | 6_3:-6906870 | Msa0936220:CDS |
| TGGCAATGAATGGACCAGAG+TGG | 0.761725 | 6_3:-6908407 | Msa0936220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAATAAAACTG+AGG | + | chr6_3:6907376-6907395 | None:intergenic | 10.0% |
| !!! | ACAATTTATGTTTATTTTTA+AGG | - | chr6_3:6907793-6907812 | Msa0936220:intron | 10.0% |
| !! | TTAAAAATAACAATTTAGTA+GGG | + | chr6_3:6908079-6908098 | None:intergenic | 10.0% |
| !!! | ATTTAAGACTTTTATAATTT+TGG | - | chr6_3:6908559-6908578 | Msa0936220:CDS | 10.0% |
| !! | AATAAAATAAAATAAAACTG+AGG | + | chr6_3:6907376-6907395 | None:intergenic | 10.0% |
| !!! | ACAATTTATGTTTATTTTTA+AGG | - | chr6_3:6907793-6907812 | Msa0936220:intron | 10.0% |
| !! | TTAAAAATAACAATTTAGTA+GGG | + | chr6_3:6908079-6908098 | None:intergenic | 10.0% |
| !!! | ATTTAAGACTTTTATAATTT+TGG | - | chr6_3:6908559-6908578 | Msa0936220:CDS | 10.0% |
| !!! | TTGCTTTAAATTTTGTATTT+TGG | - | chr6_3:6907545-6907564 | Msa0936220:intron | 15.0% |
| !!! | ATTATTATTTGTTAGAAAAG+AGG | - | chr6_3:6907719-6907738 | Msa0936220:intron | 15.0% |
| !! | GTTAAAAATAACAATTTAGT+AGG | + | chr6_3:6908080-6908099 | None:intergenic | 15.0% |
| !!! | TTGCTTTAAATTTTGTATTT+TGG | - | chr6_3:6907545-6907564 | Msa0936220:intron | 15.0% |
| !!! | ATTATTATTTGTTAGAAAAG+AGG | - | chr6_3:6907719-6907738 | Msa0936220:intron | 15.0% |
| !! | GTTAAAAATAACAATTTAGT+AGG | + | chr6_3:6908080-6908099 | None:intergenic | 15.0% |
| !! | TTGAGATGAAAAAGAATTTA+TGG | + | chr6_3:6908357-6908376 | None:intergenic | 20.0% |
| !!! | TTTATAATTTTGGTAAGTAC+CGG | - | chr6_3:6908569-6908588 | Msa0936220:CDS | 20.0% |
| !! | TTGAGATGAAAAAGAATTTA+TGG | + | chr6_3:6908357-6908376 | None:intergenic | 20.0% |
| !!! | TTTATAATTTTGGTAAGTAC+CGG | - | chr6_3:6908569-6908588 | Msa0936220:CDS | 20.0% |
| !!! | TAAATTTGTAGTTGATGATG+AGG | - | chr6_3:6906917-6906936 | Msa0936220:CDS | 25.0% |
| ! | TAATAGTAAAAACGAGAAGA+AGG | - | chr6_3:6906947-6906966 | Msa0936220:CDS | 25.0% |
| !!! | TGTATAAATGCGGTTTTATT+CGG | - | chr6_3:6907038-6907057 | Msa0936220:CDS | 25.0% |
| !!! | ATTTATGCACTTTGTTTTCT+AGG | - | chr6_3:6907152-6907171 | Msa0936220:CDS | 25.0% |
| !!! | TTTATGCACTTTGTTTTCTA+GGG | - | chr6_3:6907153-6907172 | Msa0936220:CDS | 25.0% |
| !! | ATATTATAGCTTTGCTTACA+TGG | - | chr6_3:6907211-6907230 | Msa0936220:CDS | 25.0% |
| !! | TATTATAGCTTTGCTTACAT+GGG | - | chr6_3:6907212-6907231 | Msa0936220:CDS | 25.0% |
| ! | AACTTCAAAAGTAAGTATCT+TGG | + | chr6_3:6907276-6907295 | None:intergenic | 25.0% |
| !!! | AAGATACTTACTTTTGAAGT+TGG | - | chr6_3:6907275-6907294 | Msa0936220:CDS | 25.0% |
| !! | TTCACAAGTTGAAAGTAAAA+AGG | - | chr6_3:6907508-6907527 | Msa0936220:intron | 25.0% |
| ! | TTGAAAGTAAAAAGGAATAG+AGG | - | chr6_3:6907516-6907535 | Msa0936220:intron | 25.0% |
| ! | TGAAAGTAAAAAGGAATAGA+GGG | - | chr6_3:6907517-6907536 | Msa0936220:intron | 25.0% |
| !!! | TTATTGTTCGTCATTTTGAA+GGG | - | chr6_3:6907651-6907670 | Msa0936220:intron | 25.0% |
| ! | GAATAAGCGTATTAAGTTAA+AGG | - | chr6_3:6907936-6907955 | Msa0936220:intron | 25.0% |
| ! | ATAATATCATGAGTTCTCAA+TGG | - | chr6_3:6908015-6908034 | Msa0936220:intron | 25.0% |
| !!! | GTTATTTTTAACACTTACAC+AGG | - | chr6_3:6908088-6908107 | Msa0936220:CDS | 25.0% |
| ! | TAGAAACAACATATGATAAC+TGG | + | chr6_3:6908236-6908255 | None:intergenic | 25.0% |
| !!! | TCATATGTTGTTTCTATACA+AGG | - | chr6_3:6908240-6908259 | Msa0936220:intron | 25.0% |
| !! | TATTTTGCTACATTCATCTT+GGG | + | chr6_3:6908306-6908325 | None:intergenic | 25.0% |
| !!! | ATGAAAGTATTAGACAATCT+TGG | - | chr6_3:6908423-6908442 | Msa0936220:CDS | 25.0% |
| !!! | TAAATTTGTAGTTGATGATG+AGG | - | chr6_3:6906917-6906936 | Msa0936220:CDS | 25.0% |
| ! | TAATAGTAAAAACGAGAAGA+AGG | - | chr6_3:6906947-6906966 | Msa0936220:CDS | 25.0% |
| !!! | TGTATAAATGCGGTTTTATT+CGG | - | chr6_3:6907038-6907057 | Msa0936220:CDS | 25.0% |
| !!! | ATTTATGCACTTTGTTTTCT+AGG | - | chr6_3:6907152-6907171 | Msa0936220:CDS | 25.0% |
| !!! | TTTATGCACTTTGTTTTCTA+GGG | - | chr6_3:6907153-6907172 | Msa0936220:CDS | 25.0% |
| !! | ATATTATAGCTTTGCTTACA+TGG | - | chr6_3:6907211-6907230 | Msa0936220:CDS | 25.0% |
| !! | TATTATAGCTTTGCTTACAT+GGG | - | chr6_3:6907212-6907231 | Msa0936220:CDS | 25.0% |
| ! | AACTTCAAAAGTAAGTATCT+TGG | + | chr6_3:6907276-6907295 | None:intergenic | 25.0% |
| !!! | AAGATACTTACTTTTGAAGT+TGG | - | chr6_3:6907275-6907294 | Msa0936220:CDS | 25.0% |
| !! | TTCACAAGTTGAAAGTAAAA+AGG | - | chr6_3:6907508-6907527 | Msa0936220:intron | 25.0% |
| ! | TTGAAAGTAAAAAGGAATAG+AGG | - | chr6_3:6907516-6907535 | Msa0936220:intron | 25.0% |
| ! | TGAAAGTAAAAAGGAATAGA+GGG | - | chr6_3:6907517-6907536 | Msa0936220:intron | 25.0% |
| !!! | TTATTGTTCGTCATTTTGAA+GGG | - | chr6_3:6907651-6907670 | Msa0936220:intron | 25.0% |
| ! | GAATAAGCGTATTAAGTTAA+AGG | - | chr6_3:6907936-6907955 | Msa0936220:intron | 25.0% |
| ! | ATAATATCATGAGTTCTCAA+TGG | - | chr6_3:6908015-6908034 | Msa0936220:intron | 25.0% |
| !!! | GTTATTTTTAACACTTACAC+AGG | - | chr6_3:6908088-6908107 | Msa0936220:CDS | 25.0% |
| ! | TAGAAACAACATATGATAAC+TGG | + | chr6_3:6908236-6908255 | None:intergenic | 25.0% |
| !!! | TCATATGTTGTTTCTATACA+AGG | - | chr6_3:6908240-6908259 | Msa0936220:intron | 25.0% |
| !! | TATTTTGCTACATTCATCTT+GGG | + | chr6_3:6908306-6908325 | None:intergenic | 25.0% |
| !!! | ATGAAAGTATTAGACAATCT+TGG | - | chr6_3:6908423-6908442 | Msa0936220:CDS | 25.0% |
| !! | ATGTTTGGGTTGTATAAATG+CGG | - | chr6_3:6907028-6907047 | Msa0936220:CDS | 30.0% |
| !!! | GGTCATATCGGTTTATTTTT+TGG | - | chr6_3:6907097-6907116 | Msa0936220:CDS | 30.0% |
| !!! | CATATCGGTTTATTTTTTGG+AGG | - | chr6_3:6907100-6907119 | Msa0936220:CDS | 30.0% |
| !!! | TACTTACTTTTGAAGTTGGT+TGG | - | chr6_3:6907279-6907298 | Msa0936220:CDS | 30.0% |
| GATGAAGATCAAAATTCTAC+CGG | - | chr6_3:6907305-6907324 | Msa0936220:intron | 30.0% | |
| TGAAAGATGCTTGTCTAATT+GGG | + | chr6_3:6907600-6907619 | None:intergenic | 30.0% | |
| TTGAAAGATGCTTGTCTAAT+TGG | + | chr6_3:6907601-6907620 | None:intergenic | 30.0% | |
| TAGTGACAGAAAAAAGAACT+AGG | + | chr6_3:6907627-6907646 | None:intergenic | 30.0% | |
| !! | GTTATTGTTCGTCATTTTGA+AGG | - | chr6_3:6907650-6907669 | Msa0936220:intron | 30.0% |
| AGTAGTAATAGCATTCACAA+TGG | - | chr6_3:6908163-6908182 | Msa0936220:CDS | 30.0% | |
| GTAGTAATAGCATTCACAAT+GGG | - | chr6_3:6908164-6908183 | Msa0936220:CDS | 30.0% | |
| TTGAACTGCTATCATAACAA+TGG | + | chr6_3:6908213-6908232 | None:intergenic | 30.0% | |
| ! | CTATTTTGCTACATTCATCT+TGG | + | chr6_3:6908307-6908326 | None:intergenic | 30.0% |
| GTCTAATACTTTCATGACTT+GGG | + | chr6_3:6908418-6908437 | None:intergenic | 30.0% | |
| TGTCTAATACTTTCATGACT+TGG | + | chr6_3:6908419-6908438 | None:intergenic | 30.0% | |
| !! | ATGTTTGGGTTGTATAAATG+CGG | - | chr6_3:6907028-6907047 | Msa0936220:CDS | 30.0% |
| !!! | GGTCATATCGGTTTATTTTT+TGG | - | chr6_3:6907097-6907116 | Msa0936220:CDS | 30.0% |
| !!! | CATATCGGTTTATTTTTTGG+AGG | - | chr6_3:6907100-6907119 | Msa0936220:CDS | 30.0% |
| !!! | TACTTACTTTTGAAGTTGGT+TGG | - | chr6_3:6907279-6907298 | Msa0936220:CDS | 30.0% |
| GATGAAGATCAAAATTCTAC+CGG | - | chr6_3:6907305-6907324 | Msa0936220:intron | 30.0% | |
| TGAAAGATGCTTGTCTAATT+GGG | + | chr6_3:6907600-6907619 | None:intergenic | 30.0% | |
| TTGAAAGATGCTTGTCTAAT+TGG | + | chr6_3:6907601-6907620 | None:intergenic | 30.0% | |
| TAGTGACAGAAAAAAGAACT+AGG | + | chr6_3:6907627-6907646 | None:intergenic | 30.0% | |
| !! | GTTATTGTTCGTCATTTTGA+AGG | - | chr6_3:6907650-6907669 | Msa0936220:intron | 30.0% |
| AGTAGTAATAGCATTCACAA+TGG | - | chr6_3:6908163-6908182 | Msa0936220:CDS | 30.0% | |
| GTAGTAATAGCATTCACAAT+GGG | - | chr6_3:6908164-6908183 | Msa0936220:CDS | 30.0% | |
| TTGAACTGCTATCATAACAA+TGG | + | chr6_3:6908213-6908232 | None:intergenic | 30.0% | |
| ! | CTATTTTGCTACATTCATCT+TGG | + | chr6_3:6908307-6908326 | None:intergenic | 30.0% |
| GTCTAATACTTTCATGACTT+GGG | + | chr6_3:6908418-6908437 | None:intergenic | 30.0% | |
| TGTCTAATACTTTCATGACT+TGG | + | chr6_3:6908419-6908438 | None:intergenic | 30.0% | |
| ! | GTTGACTTAAAAGAGCTAGA+AGG | + | chr6_3:6906840-6906859 | None:intergenic | 35.0% |
| !! | TGTAGTTGATGATGAGGATA+AGG | - | chr6_3:6906923-6906942 | Msa0936220:CDS | 35.0% |
| TAAAAACGAGAAGAAGGTTG+AGG | - | chr6_3:6906953-6906972 | Msa0936220:CDS | 35.0% | |
| TCCTTCCTTTCAAAGATTGT+TGG | - | chr6_3:6906977-6906996 | Msa0936220:CDS | 35.0% | |
| CATTGCCAACAATCTTTGAA+AGG | + | chr6_3:6906985-6907004 | None:intergenic | 35.0% | |
| CAAAGATTGTTGGCAATGAA+TGG | - | chr6_3:6906987-6907006 | Msa0936220:CDS | 35.0% | |
| AAACATGTTTACTTCCACTC+TGG | + | chr6_3:6907014-6907033 | None:intergenic | 35.0% | |
| AGAGTGGAAGTAAACATGTT+TGG | - | chr6_3:6907013-6907032 | Msa0936220:CDS | 35.0% | |
| GAGTGGAAGTAAACATGTTT+GGG | - | chr6_3:6907014-6907033 | Msa0936220:CDS | 35.0% | |
| ATTCAACCTGTGTATTCGTT+TGG | - | chr6_3:6907065-6907084 | Msa0936220:CDS | 35.0% | |
| ATGAGATCAAGAGGCAAATT+AGG | - | chr6_3:6907129-6907148 | Msa0936220:CDS | 35.0% | |
| GAAAGATGCTTGTCTAATTG+GGG | + | chr6_3:6907599-6907618 | None:intergenic | 35.0% | |
| !! | TTCTCTTTGAAGGTGTCAAA+GGG | + | chr6_3:6907844-6907863 | None:intergenic | 35.0% |
| !! | TTTCTCTTTGAAGGTGTCAA+AGG | + | chr6_3:6907845-6907864 | None:intergenic | 35.0% |
| CTCTATCTCTTTCTCTTTGA+AGG | + | chr6_3:6907854-6907873 | None:intergenic | 35.0% | |
| ACTTACACAGGTAAGATCTT+TGG | - | chr6_3:6908100-6908119 | Msa0936220:CDS | 35.0% | |
| ATGCTTGAAAAATCCCAACA+AGG | - | chr6_3:6908392-6908411 | Msa0936220:intron | 35.0% | |
| !! | ATTAGACAATCTTGGTTTGC+TGG | - | chr6_3:6908431-6908450 | Msa0936220:CDS | 35.0% |
| !! | GTAGTTATGCTTTGAGCTTT+TGG | - | chr6_3:6908489-6908508 | Msa0936220:CDS | 35.0% |
| !! | TATGCTTTGAGCTTTTGGTA+TGG | - | chr6_3:6908494-6908513 | Msa0936220:CDS | 35.0% |
| CAAGGTTATATCTCAGCTAA+GGG | - | chr6_3:6908533-6908552 | Msa0936220:CDS | 35.0% | |
| AAGGTTATATCTCAGCTAAG+GGG | - | chr6_3:6908534-6908553 | Msa0936220:CDS | 35.0% | |
| ! | AGCATCAGCAATAACTTTTC+CGG | + | chr6_3:6908591-6908610 | None:intergenic | 35.0% |
| ! | GTTGACTTAAAAGAGCTAGA+AGG | + | chr6_3:6906840-6906859 | None:intergenic | 35.0% |
| !! | TGTAGTTGATGATGAGGATA+AGG | - | chr6_3:6906923-6906942 | Msa0936220:CDS | 35.0% |
| TAAAAACGAGAAGAAGGTTG+AGG | - | chr6_3:6906953-6906972 | Msa0936220:CDS | 35.0% | |
| TCCTTCCTTTCAAAGATTGT+TGG | - | chr6_3:6906977-6906996 | Msa0936220:CDS | 35.0% | |
| CATTGCCAACAATCTTTGAA+AGG | + | chr6_3:6906985-6907004 | None:intergenic | 35.0% | |
| CAAAGATTGTTGGCAATGAA+TGG | - | chr6_3:6906987-6907006 | Msa0936220:CDS | 35.0% | |
| AAACATGTTTACTTCCACTC+TGG | + | chr6_3:6907014-6907033 | None:intergenic | 35.0% | |
| AGAGTGGAAGTAAACATGTT+TGG | - | chr6_3:6907013-6907032 | Msa0936220:CDS | 35.0% | |
| GAGTGGAAGTAAACATGTTT+GGG | - | chr6_3:6907014-6907033 | Msa0936220:CDS | 35.0% | |
| ATTCAACCTGTGTATTCGTT+TGG | - | chr6_3:6907065-6907084 | Msa0936220:CDS | 35.0% | |
| ATGAGATCAAGAGGCAAATT+AGG | - | chr6_3:6907129-6907148 | Msa0936220:CDS | 35.0% | |
| GAAAGATGCTTGTCTAATTG+GGG | + | chr6_3:6907599-6907618 | None:intergenic | 35.0% | |
| !! | TTCTCTTTGAAGGTGTCAAA+GGG | + | chr6_3:6907844-6907863 | None:intergenic | 35.0% |
| !! | TTTCTCTTTGAAGGTGTCAA+AGG | + | chr6_3:6907845-6907864 | None:intergenic | 35.0% |
| CTCTATCTCTTTCTCTTTGA+AGG | + | chr6_3:6907854-6907873 | None:intergenic | 35.0% | |
| ACTTACACAGGTAAGATCTT+TGG | - | chr6_3:6908100-6908119 | Msa0936220:CDS | 35.0% | |
| ATGCTTGAAAAATCCCAACA+AGG | - | chr6_3:6908392-6908411 | Msa0936220:intron | 35.0% | |
| !! | ATTAGACAATCTTGGTTTGC+TGG | - | chr6_3:6908431-6908450 | Msa0936220:CDS | 35.0% |
| !! | GTAGTTATGCTTTGAGCTTT+TGG | - | chr6_3:6908489-6908508 | Msa0936220:CDS | 35.0% |
| !! | TATGCTTTGAGCTTTTGGTA+TGG | - | chr6_3:6908494-6908513 | Msa0936220:CDS | 35.0% |
| CAAGGTTATATCTCAGCTAA+GGG | - | chr6_3:6908533-6908552 | Msa0936220:CDS | 35.0% | |
| AAGGTTATATCTCAGCTAAG+GGG | - | chr6_3:6908534-6908553 | Msa0936220:CDS | 35.0% | |
| ! | AGCATCAGCAATAACTTTTC+CGG | + | chr6_3:6908591-6908610 | None:intergenic | 35.0% |
| !! | TCTTTTAAGTCAACAACGCG+AGG | - | chr6_3:6906846-6906865 | Msa0936220:CDS | 40.0% |
| ! | GCCAACAATCTTTGAAAGGA+AGG | + | chr6_3:6906981-6907000 | None:intergenic | 40.0% |
| ACCTGTGTATTCGTTTGGAT+TGG | - | chr6_3:6907070-6907089 | Msa0936220:CDS | 40.0% | |
| CCTGTGTATTCGTTTGGATT+GGG | - | chr6_3:6907071-6907090 | Msa0936220:CDS | 40.0% | |
| CTGTGTATTCGTTTGGATTG+GGG | - | chr6_3:6907072-6907091 | Msa0936220:CDS | 40.0% | |
| TTTGCCTCTTGATCTCATCA+TGG | + | chr6_3:6907127-6907146 | None:intergenic | 40.0% | |
| !!! | TGCACTTTGTTTTCTAGGGT+TGG | - | chr6_3:6907157-6907176 | Msa0936220:CDS | 40.0% |
| ! | AAGTCTAGAGCAAACAGAAC+CGG | + | chr6_3:6907327-6907346 | None:intergenic | 40.0% |
| !! | ACATACCACATTGGCTTCTT+TGG | + | chr6_3:6907351-6907370 | None:intergenic | 40.0% |
| !!! | GAAGGTGTCAAAGGGTTTTT+GGG | + | chr6_3:6907836-6907855 | None:intergenic | 40.0% |
| !!! | TGAAGGTGTCAAAGGGTTTT+TGG | + | chr6_3:6907837-6907856 | None:intergenic | 40.0% |
| TACACAGGTAAGATCTTTGG+TGG | - | chr6_3:6908103-6908122 | Msa0936220:CDS | 40.0% | |
| ACACAGGTAAGATCTTTGGT+GGG | - | chr6_3:6908104-6908123 | Msa0936220:CDS | 40.0% | |
| ! | ATCTTTGGTGGGTGATAGAT+TGG | - | chr6_3:6908115-6908134 | Msa0936220:CDS | 40.0% |
| CAATGGGACTAATCATTGCA+TGG | - | chr6_3:6908180-6908199 | Msa0936220:CDS | 40.0% | |
| ! | TGCTTGGCATTTTCTTGAGA+AGG | + | chr6_3:6908271-6908290 | None:intergenic | 40.0% |
| ! | CTTTGAGCTTTTGGTATGGT+GGG | - | chr6_3:6908498-6908517 | Msa0936220:CDS | 40.0% |
| GCAAGGTTATATCTCAGCTA+AGG | - | chr6_3:6908532-6908551 | Msa0936220:CDS | 40.0% | |
| GGAAAAGTTATTGCTGATGC+TGG | - | chr6_3:6908590-6908609 | Msa0936220:CDS | 40.0% | |
| !! | TCTTTTAAGTCAACAACGCG+AGG | - | chr6_3:6906846-6906865 | Msa0936220:CDS | 40.0% |
| ! | GCCAACAATCTTTGAAAGGA+AGG | + | chr6_3:6906981-6907000 | None:intergenic | 40.0% |
| ACCTGTGTATTCGTTTGGAT+TGG | - | chr6_3:6907070-6907089 | Msa0936220:CDS | 40.0% | |
| CCTGTGTATTCGTTTGGATT+GGG | - | chr6_3:6907071-6907090 | Msa0936220:CDS | 40.0% | |
| CTGTGTATTCGTTTGGATTG+GGG | - | chr6_3:6907072-6907091 | Msa0936220:CDS | 40.0% | |
| TTTGCCTCTTGATCTCATCA+TGG | + | chr6_3:6907127-6907146 | None:intergenic | 40.0% | |
| !!! | TGCACTTTGTTTTCTAGGGT+TGG | - | chr6_3:6907157-6907176 | Msa0936220:CDS | 40.0% |
| ! | AAGTCTAGAGCAAACAGAAC+CGG | + | chr6_3:6907327-6907346 | None:intergenic | 40.0% |
| !! | ACATACCACATTGGCTTCTT+TGG | + | chr6_3:6907351-6907370 | None:intergenic | 40.0% |
| !!! | GAAGGTGTCAAAGGGTTTTT+GGG | + | chr6_3:6907836-6907855 | None:intergenic | 40.0% |
| !!! | TGAAGGTGTCAAAGGGTTTT+TGG | + | chr6_3:6907837-6907856 | None:intergenic | 40.0% |
| TACACAGGTAAGATCTTTGG+TGG | - | chr6_3:6908103-6908122 | Msa0936220:CDS | 40.0% | |
| ACACAGGTAAGATCTTTGGT+GGG | - | chr6_3:6908104-6908123 | Msa0936220:CDS | 40.0% | |
| ! | ATCTTTGGTGGGTGATAGAT+TGG | - | chr6_3:6908115-6908134 | Msa0936220:CDS | 40.0% |
| CAATGGGACTAATCATTGCA+TGG | - | chr6_3:6908180-6908199 | Msa0936220:CDS | 40.0% | |
| ! | TGCTTGGCATTTTCTTGAGA+AGG | + | chr6_3:6908271-6908290 | None:intergenic | 40.0% |
| ! | CTTTGAGCTTTTGGTATGGT+GGG | - | chr6_3:6908498-6908517 | Msa0936220:CDS | 40.0% |
| GCAAGGTTATATCTCAGCTA+AGG | - | chr6_3:6908532-6908551 | Msa0936220:CDS | 40.0% | |
| GGAAAAGTTATTGCTGATGC+TGG | - | chr6_3:6908590-6908609 | Msa0936220:CDS | 40.0% | |
| CCCAATCCAAACGAATACAC+AGG | + | chr6_3:6907074-6907093 | None:intergenic | 45.0% | |
| ! | GTATTCGTTTGGATTGGGGT+CGG | - | chr6_3:6907076-6907095 | Msa0936220:CDS | 45.0% |
| AGGACCATGATGAGATCAAG+AGG | - | chr6_3:6907120-6907139 | Msa0936220:CDS | 45.0% | |
| !! | AGGGTTGGCTGTTATCTCAA+TGG | - | chr6_3:6907172-6907191 | Msa0936220:CDS | 45.0% |
| !! | TGGGAGAGTACTTGACTAAG+AGG | - | chr6_3:6907231-6907250 | Msa0936220:CDS | 45.0% |
| !! | GGGAGAGTACTTGACTAAGA+GGG | - | chr6_3:6907232-6907251 | Msa0936220:CDS | 45.0% |
| ACTTGCCAAAGAAGCCAATG+TGG | - | chr6_3:6907343-6907362 | Msa0936220:intron | 45.0% | |
| ACTGAGGAGACATACCACAT+TGG | + | chr6_3:6907360-6907379 | None:intergenic | 45.0% | |
| AATGCCAAGCAAAGCCATCA+AGG | - | chr6_3:6908280-6908299 | Msa0936220:intron | 45.0% | |
| ACATTCATCTTGGGCCTTGA+TGG | + | chr6_3:6908297-6908316 | None:intergenic | 45.0% | |
| !! | TTCATGACTTGGGCCTTGTT+GGG | + | chr6_3:6908408-6908427 | None:intergenic | 45.0% |
| ! | TTTCATGACTTGGGCCTTGT+TGG | + | chr6_3:6908409-6908428 | None:intergenic | 45.0% |
| !! | CAATCTTGGTTTGCTGGCAT+TGG | - | chr6_3:6908437-6908456 | Msa0936220:CDS | 45.0% |
| !! | GCTTTGAGCTTTTGGTATGG+TGG | - | chr6_3:6908497-6908516 | Msa0936220:CDS | 45.0% |
| CCCAATCCAAACGAATACAC+AGG | + | chr6_3:6907074-6907093 | None:intergenic | 45.0% | |
| ! | GTATTCGTTTGGATTGGGGT+CGG | - | chr6_3:6907076-6907095 | Msa0936220:CDS | 45.0% |
| AGGACCATGATGAGATCAAG+AGG | - | chr6_3:6907120-6907139 | Msa0936220:CDS | 45.0% | |
| !! | AGGGTTGGCTGTTATCTCAA+TGG | - | chr6_3:6907172-6907191 | Msa0936220:CDS | 45.0% |
| !! | TGGGAGAGTACTTGACTAAG+AGG | - | chr6_3:6907231-6907250 | Msa0936220:CDS | 45.0% |
| !! | GGGAGAGTACTTGACTAAGA+GGG | - | chr6_3:6907232-6907251 | Msa0936220:CDS | 45.0% |
| ACTTGCCAAAGAAGCCAATG+TGG | - | chr6_3:6907343-6907362 | Msa0936220:intron | 45.0% | |
| ACTGAGGAGACATACCACAT+TGG | + | chr6_3:6907360-6907379 | None:intergenic | 45.0% | |
| AATGCCAAGCAAAGCCATCA+AGG | - | chr6_3:6908280-6908299 | Msa0936220:intron | 45.0% | |
| ACATTCATCTTGGGCCTTGA+TGG | + | chr6_3:6908297-6908316 | None:intergenic | 45.0% | |
| !! | TTCATGACTTGGGCCTTGTT+GGG | + | chr6_3:6908408-6908427 | None:intergenic | 45.0% |
| ! | TTTCATGACTTGGGCCTTGT+TGG | + | chr6_3:6908409-6908428 | None:intergenic | 45.0% |
| !! | CAATCTTGGTTTGCTGGCAT+TGG | - | chr6_3:6908437-6908456 | Msa0936220:CDS | 45.0% |
| !! | GCTTTGAGCTTTTGGTATGG+TGG | - | chr6_3:6908497-6908516 | Msa0936220:CDS | 45.0% |
| !! | ATATAATATAAAAAATTACA+AGG | - | chr6_3:6907422-6907441 | Msa0936220:intron | 5.0% |
| !! | TATAATATAAAAAATTACAA+GGG | - | chr6_3:6907423-6907442 | Msa0936220:intron | 5.0% |
| !! | ATATAATATAAAAAATTACA+AGG | - | chr6_3:6907422-6907441 | Msa0936220:intron | 5.0% |
| !! | TATAATATAAAAAATTACAA+GGG | - | chr6_3:6907423-6907442 | Msa0936220:intron | 5.0% |
| TGGCAATGAATGGACCAGAG+TGG | - | chr6_3:6906997-6907016 | Msa0936220:CDS | 50.0% | |
| ! | TGGATTGGGGTCGGTCATAT+CGG | - | chr6_3:6907085-6907104 | Msa0936220:CDS | 50.0% |
| !! | GGGTGATAGATTGGCTCTAG+TGG | - | chr6_3:6908124-6908143 | Msa0936220:CDS | 50.0% |
| TGGCAATGAATGGACCAGAG+TGG | - | chr6_3:6906997-6907016 | Msa0936220:CDS | 50.0% | |
| ! | TGGATTGGGGTCGGTCATAT+CGG | - | chr6_3:6907085-6907104 | Msa0936220:CDS | 50.0% |
| !! | GGGTGATAGATTGGCTCTAG+TGG | - | chr6_3:6908124-6908143 | Msa0936220:CDS | 50.0% |
| ! | TGGGCCTTGATGGCTTTGCT+TGG | + | chr6_3:6908287-6908306 | None:intergenic | 55.0% |
| GGTGGGAAACTTGTGTCGCA+AGG | - | chr6_3:6908515-6908534 | Msa0936220:CDS | 55.0% | |
| ! | TGGGCCTTGATGGCTTTGCT+TGG | + | chr6_3:6908287-6908306 | None:intergenic | 55.0% |
| GGTGGGAAACTTGTGTCGCA+AGG | - | chr6_3:6908515-6908534 | Msa0936220:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 6906789 | 6908637 | 6906789 | ID=Msa0936220;Name=Msa0936220 |
| chr6_3 | mRNA | 6906789 | 6908637 | 6906789 | ID=Msa0936220-mRNA-1;Parent=Msa0936220;Name=Msa0936220-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|0.66|3|0|302 |
| chr6_3 | exon | 6908405 | 6908637 | 6908405 | ID=Msa0936220-mRNA-1:exon:2277;Parent=Msa0936220-mRNA-1 |
| chr6_3 | exon | 6908062 | 6908206 | 6908062 | ID=Msa0936220-mRNA-1:exon:2276;Parent=Msa0936220-mRNA-1 |
| chr6_3 | exon | 6906789 | 6907316 | 6906789 | ID=Msa0936220-mRNA-1:exon:2275;Parent=Msa0936220-mRNA-1 |
| chr6_3 | CDS | 6908405 | 6908637 | 6908405 | ID=Msa0936220-mRNA-1:cds;Parent=Msa0936220-mRNA-1 |
| chr6_3 | CDS | 6908062 | 6908206 | 6908062 | ID=Msa0936220-mRNA-1:cds;Parent=Msa0936220-mRNA-1 |
| chr6_3 | CDS | 6906789 | 6907316 | 6906789 | ID=Msa0936220-mRNA-1:cds;Parent=Msa0936220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
