AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025330 MtrunA17_Chr1g0179821 91.186 1248 54 4 1 1247 93 1285 0.0 2186
Msa0025330 MtrunA17_Chr1g0197491 29.871 1165 651 29 1 1061 116 1218 3.77e-102 352
Msa0025330 MtrunA17_Chr6g0454161 86.441 118 16 0 867 984 203 320 3.40e-59 207
Msa0025330 MtrunA17_Chr1g0203361 27.747 364 207 14 2 351 91 412 5.79e-14 77.0
Msa0025330 MtrunA17_Chr5g0397721 25.748 602 337 20 690 1241 517 1058 1.50e-13 75.9
Msa0025330 MtrunA17_Chr5g0397721 26.258 457 263 14 2 424 94 510 2.65e-11 68.6
Msa0025330 MtrunA17_Chr8g0386571 25.193 389 218 11 2 350 93 448 1.63e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025330 AT5G52280.1 27.551 392 226 13 2 381 92 437 6.20e-15 80.5

Find 205 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTGAACCTTCAAATTTC+TGG 0.069264 1_1:-48339834 None:intergenic
CACCGGTGTCTTGCATATTT+TGG 0.070954 1_1:-48337561 None:intergenic
GATTCTCTATTTCTAGTTTA+AGG 0.082921 1_1:-48339439 None:intergenic
AAGGGTCCTGTTGATCTTTC+AGG 0.132731 1_1:-48340413 None:intergenic
CAAGCTCAACATTTGCTTCT+TGG 0.157455 1_1:-48337978 None:intergenic
ATTCCACCTCTGCATATTTA+AGG 0.182023 1_1:-48341921 None:intergenic
TTCAGAGATGGATGGTATTT+TGG 0.182337 1_1:+48339337 Msa0025330:CDS
TGCTGATTTCAAATTTAAAA+TGG 0.188126 1_1:+48339667 Msa0025330:CDS
TCAATTTGAAAATGAGATTA+TGG 0.213947 1_1:+48339868 Msa0025330:CDS
GCCAAATTGGAATCGGCTTT+TGG 0.222360 1_1:+48339551 Msa0025330:CDS
CACAGTCTCTCCTCCATTGC+AGG 0.229035 1_1:-48338358 None:intergenic
TCCAAAAGCCGATTCCAATT+TGG 0.234836 1_1:-48339552 None:intergenic
ACCATCATTACTAATCTTCT+TGG 0.240885 1_1:-48338658 None:intergenic
CTCAAGTTTCTGCTGTTCTA+TGG 0.245534 1_1:-48338028 None:intergenic
ATCTTCCTCTGTTGGTGATA+TGG 0.252738 1_1:+48336921 Msa0025330:CDS
TATATTTGACAAAAGATCTT+TGG 0.263920 1_1:-48338541 None:intergenic
TGAGAAGAGTTATTATTAAC+AGG 0.269806 1_1:-48337514 None:intergenic
GGATTCTTCCATAGAAGATT+TGG 0.273767 1_1:+48339007 Msa0025330:CDS
TGATGTTTCCTGCTGTTATA+AGG 0.275186 1_1:-48340432 None:intergenic
TGTAGGTGATGCAGATCTTT+TGG 0.275812 1_1:+48338389 Msa0025330:CDS
CACTTCAAATTCGTGTTATA+AGG 0.278445 1_1:-48342057 None:intergenic
GGAAGAGTTGAGAGATATTC+AGG 0.281278 1_1:+48341879 Msa0025330:CDS
AGAAGAATTGAAACTGATTA+AGG 0.287044 1_1:+48340171 Msa0025330:CDS
CTTTAGTTGCAAAGACAAAT+TGG 0.293118 1_1:-48337950 None:intergenic
GATTCATTTGAGAAGCTAAA+TGG 0.300157 1_1:+48339146 Msa0025330:CDS
ACCATAGTCTCAACTTCTTC+AGG 0.302249 1_1:-48336958 None:intergenic
TGTTTCCTTCTTCACTTGTC+TGG 0.311103 1_1:-48338104 None:intergenic
GGCCATTTGCATGGTTGTTT+CGG 0.319561 1_1:-48341786 None:intergenic
GCCTTCTGATCATCATTAAC+AGG 0.320976 1_1:-48340232 None:intergenic
CAGTCTCTCTTTCTCAGTAT+TGG 0.325818 1_1:-48339915 None:intergenic
TATATGAAGTTCAACTTAAC+AGG 0.330514 1_1:+48340738 Msa0025330:CDS
AATCAGCAAGCTCAGTTGTT+AGG 0.331769 1_1:-48339652 None:intergenic
CTATGGTTTCTTCCAGCTCC+TGG 0.336965 1_1:-48338011 None:intergenic
TTGCAGGCAGAAAGTCTTCC+TGG 0.343418 1_1:+48337349 Msa0025330:intron
AGAGCAGTATTGCTCCCTTA+TGG 0.355383 1_1:+48339196 Msa0025330:CDS
ACGTGCTGATAAAGCCAAAT+TGG 0.355795 1_1:+48339538 Msa0025330:CDS
CCTATTGCTGCGAACTTGAT+TGG 0.365126 1_1:-48340358 None:intergenic
TCTGTTGTCTCTGTAGAAAA+TGG 0.366879 1_1:+48336065 Msa0025330:five_prime_UTR
CAAGTAAAGAAAAGGAGATT+GGG 0.387398 1_1:+48338799 Msa0025330:CDS
TCAGTTTCAATTCTTCTTCA+AGG 0.388382 1_1:-48340165 None:intergenic
GATATTTACGATGACCGTTA+TGG 0.389789 1_1:-48342161 None:intergenic
AGCAATTGAGTCTTTGATAC+AGG 0.391073 1_1:-48340677 None:intergenic
TCAAGTAAAGAAAAGGAGAT+TGG 0.396372 1_1:+48338798 Msa0025330:CDS
GATGTTTCCTGCTGTTATAA+GGG 0.399357 1_1:-48340431 None:intergenic
ACCTGAAGAAGTTGAGACTA+TGG 0.400749 1_1:+48336957 Msa0025330:CDS
CCAATCAAGTTCGCAGCAAT+AGG 0.402605 1_1:+48340358 Msa0025330:CDS
GGAGAAGGCTGCATCAGAAT+TGG 0.404436 1_1:+48340021 Msa0025330:CDS
TAAAGGAAACACAATTTCAT+TGG 0.415707 1_1:+48339039 Msa0025330:CDS
CCGCTAAATAAGTGCAATCA+TGG 0.416997 1_1:+48336403 Msa0025330:CDS
GCTGGCTATGGTGCAAGAAC+TGG 0.422369 1_1:+48338176 Msa0025330:CDS
AAGGCAGAGAATACATCATT+TGG 0.422493 1_1:+48339980 Msa0025330:CDS
AGTATTGAATAAGAAAGTTC+AGG 0.424150 1_1:+48338422 Msa0025330:CDS
ATCAAGTTTCAAAGCTAAAC+AGG 0.424335 1_1:+48340206 Msa0025330:CDS
TCTCTGTCATTCTTTAAAGA+TGG 0.425434 1_1:-48340387 None:intergenic
GGAAACAAATTCTCATTTGA+AGG 0.425661 1_1:+48336819 Msa0025330:CDS
TATTAACAGGGTAGTCGTAA+TGG 0.426861 1_1:-48337501 None:intergenic
TTTGAAAGGGATCATTGGTT+AGG 0.427454 1_1:+48342123 Msa0025330:three_prime_UTR
AGCAAAGTCACGGTGCGAAA+TGG 0.428476 1_1:+48336107 Msa0025330:five_prime_UTR
AACAGTTTGTCCCACCCCTT+TGG 0.428541 1_1:-48336038 None:intergenic
CTCAACTTCTTCAGGTGATA+AGG 0.429179 1_1:-48336950 None:intergenic
ATCATTAAGATCTGGAATCC+TGG 0.429489 1_1:+48336318 Msa0025330:CDS
CATGATTGCACTTATTTAGC+GGG 0.430592 1_1:-48336402 None:intergenic
CCCTCAACCTGGCTTCCATA+AGG 0.430841 1_1:-48339211 None:intergenic
TCCCTTTCCTGTGGAATCCT+CGG 0.433917 1_1:-48337401 None:intergenic
TGAGCTTGTTTCTGTTCTCC+AGG 0.434229 1_1:+48337993 Msa0025330:CDS
TGTTTCTGTTCTCCAGGAGC+TGG 0.440644 1_1:+48337999 Msa0025330:CDS
GCATCTCCGCAATCTTCTCT+TGG 0.441780 1_1:-48338974 None:intergenic
ACTGCATAAGCCTTTCTTCA+AGG 0.444906 1_1:-48340069 None:intergenic
ATTAACAGGGTAGTCGTAAT+GGG 0.448727 1_1:-48337500 None:intergenic
GCACATAAAAGAGCTTAGTA+TGG 0.449723 1_1:-48342240 None:intergenic
GCCAAGAAGATTAGTAATGA+TGG 0.453336 1_1:+48338657 Msa0025330:CDS
TTGCAAAGACAAATTGGCAT+TGG 0.454395 1_1:-48337944 None:intergenic
CCTCAACCTGGCTTCCATAA+GGG 0.456943 1_1:-48339210 None:intergenic
AAAGATGGAAGGTCTGGAAA+TGG 0.457689 1_1:+48337744 Msa0025330:CDS
AGAAATCCTGAAAGATCAAC+AGG 0.457985 1_1:+48340407 Msa0025330:CDS
AAACAAATTATCTGCTAAAG+AGG 0.458484 1_1:+48338287 Msa0025330:CDS
AAAGAAGTTTGCTTTGATGC+TGG 0.460831 1_1:+48339283 Msa0025330:CDS
CTTATTGAATCAGATGCAAA+TGG 0.463804 1_1:+48339394 Msa0025330:CDS
GCCGAGGATTCCACAGGAAA+GGG 0.466600 1_1:+48337400 Msa0025330:CDS
TTCAGCAGCCTATGATGAAA+AGG 0.467557 1_1:+48339475 Msa0025330:CDS
TTCACTTGATTCCCTCAACC+TGG 0.468793 1_1:-48339222 None:intergenic
GAAGTGACTGTCAAGTCAAA+TGG 0.470428 1_1:+48336868 Msa0025330:CDS
TTGAACTTCATATATGTCAA+TGG 0.471061 1_1:-48340729 None:intergenic
CAACTCATCAAGTAAAGAAA+AGG 0.473575 1_1:+48338791 Msa0025330:CDS
CCCTTATGGAAGCCAGGTTG+AGG 0.475742 1_1:+48339210 Msa0025330:CDS
TGCATCTGAACTCGCATAGT+TGG 0.475884 1_1:-48336362 None:intergenic
CAGTTTCAATTCTTCTTCAA+GGG 0.476018 1_1:-48340164 None:intergenic
GAGCAGTTAACATTGTCATC+AGG 0.477398 1_1:+48337814 Msa0025330:CDS
TGAAGAAAGGCTTATGCAGT+TGG 0.481774 1_1:+48340072 Msa0025330:CDS
CCTTGGCTTCCAACTCACTT+AGG 0.483465 1_1:-48338836 None:intergenic
GGCCGAAACAACCATGCAAA+TGG 0.485609 1_1:+48341784 Msa0025330:CDS
GCAAAGACCGATTCAAAAGA+TGG 0.485838 1_1:+48338510 Msa0025330:CDS
ATGAACGCCAGAAAGCTGTT+GGG 0.486176 1_1:+48337679 Msa0025330:CDS
AATTGAATTCTAATGTTAGC+AGG 0.488208 1_1:+48336013 Msa0025330:five_prime_UTR
GGATGAATCCAGAAATTTGA+AGG 0.488338 1_1:+48339826 Msa0025330:CDS
AATACAATCATCAGTCTCCT+TGG 0.488486 1_1:-48336189 None:intergenic
TTCTCAGGGATCAAGAATCA+AGG 0.489413 1_1:+48336797 Msa0025330:intron
CTGCATAAGCCTTTCTTCAA+GGG 0.493954 1_1:-48340068 None:intergenic
TAACAGGGATCATTAAGATC+TGG 0.494826 1_1:+48336310 Msa0025330:intron
TACTAACTGTGGCCTCTCCC+AGG 0.496498 1_1:-48336336 None:intergenic
GAAGAATTTAACTTCAGAGA+TGG 0.498471 1_1:+48339325 Msa0025330:CDS
ATATTTGAGGCAGCAAAAGT+TGG 0.501631 1_1:+48339169 Msa0025330:CDS
GCAAGAACTGGAAGAGGCGT+TGG 0.504945 1_1:+48338188 Msa0025330:CDS
ATTGCTCCCTTATGGAAGCC+AGG 0.505043 1_1:+48339204 Msa0025330:CDS
TAATGTTAGCAGGTACCAAA+GGG 0.506277 1_1:+48336023 Msa0025330:five_prime_UTR
AGAAGCTAAATGGATATTTG+AGG 0.507658 1_1:+48339156 Msa0025330:CDS
AGTGATGGACAGAGCCGGAC+GGG 0.510231 1_1:+48337442 Msa0025330:CDS
TGGACGAAAGATGTCAAGCT+TGG 0.516980 1_1:+48340000 Msa0025330:CDS
TGATAAAGCCAAATTGGAAT+CGG 0.519468 1_1:+48339544 Msa0025330:CDS
TCTTTCCAGACAAGTGAAGA+AGG 0.521847 1_1:+48338099 Msa0025330:CDS
TTGAATCTTGTCTTCCCGTC+CGG 0.522115 1_1:-48337456 None:intergenic
CAAGAACATCCCTTGAAGAA+AGG 0.522981 1_1:+48340059 Msa0025330:CDS
TTATTTAGCGGGATTGAAAG+TGG 0.524587 1_1:-48336391 None:intergenic
CCTTATGGAAGCCAGGTTGA+GGG 0.528828 1_1:+48339211 Msa0025330:CDS
ATAAAATATTAAAACAAGAC+TGG 0.530021 1_1:-48342017 None:intergenic
CTGTAATTTGATACAGAACC+AGG 0.530049 1_1:-48337367 None:intergenic
TCTCAAGCTCATTGTTGCAA+TGG 0.530061 1_1:+48336211 Msa0025330:exon
TTCAGACTTCAAGCATAATG+AGG 0.531055 1_1:-48339942 None:intergenic
CCATGATTGCACTTATTTAG+CGG 0.533424 1_1:-48336403 None:intergenic
TCATTAAGATCTGGAATCCT+GGG 0.533611 1_1:+48336319 Msa0025330:CDS
AACAGGACCCTTATAACAGC+AGG 0.533976 1_1:+48340424 Msa0025330:CDS
TCAGCTTGAATAAAAGCTCA+AGG 0.535155 1_1:-48338482 None:intergenic
GGATACTTCAAGCAAAGCAT+TGG 0.535535 1_1:-48339510 None:intergenic
TTCAAGAGATAATTTGTCCA+AGG 0.536501 1_1:+48336172 Msa0025330:five_prime_UTR
TGCGGAGATGCAGTCTGAGA+TGG 0.536596 1_1:+48338986 Msa0025330:CDS
CTGTCCATCACTCATGTATG+TGG 0.536686 1_1:-48337431 None:intergenic
GAAAGTTCAGGAACTTGAGA+TGG 0.536733 1_1:+48338434 Msa0025330:CDS
GATGAACGCCAGAAAGCTGT+TGG 0.539056 1_1:+48337678 Msa0025330:CDS
CGCTAAATAAGTGCAATCAT+GGG 0.541016 1_1:+48336404 Msa0025330:CDS
CTAATGTTAGCAGGTACCAA+AGG 0.542601 1_1:+48336022 Msa0025330:five_prime_UTR
GAGACTGTGTCAAGAAATGT+AGG 0.543799 1_1:+48338372 Msa0025330:CDS
AACTGATGAAACATCTGAGA+TGG 0.545150 1_1:+48338755 Msa0025330:CDS
AATAGGAATCATATAGTGAA+GGG 0.548119 1_1:+48339365 Msa0025330:CDS
AGCCGAGGATTCCACAGGAA+AGG 0.549503 1_1:+48337399 Msa0025330:CDS
ACGGGAAGACAAGATTCAAC+CGG 0.549619 1_1:+48337460 Msa0025330:CDS
AGACACAAGTGAAGAGCTAC+GGG 0.550051 1_1:+48337636 Msa0025330:CDS
AAATGGCCTAGTAAAATCAA+TGG 0.552140 1_1:+48341801 Msa0025330:CDS
AGTGTTGAATCTTCCTCTGT+TGG 0.554660 1_1:+48336913 Msa0025330:CDS
AAAGATGTCAAGCTTGGAGA+AGG 0.556998 1_1:+48340006 Msa0025330:CDS
GGCTTTATCAGCACGTAATG+TGG 0.558296 1_1:-48339531 None:intergenic
AACTCAGCCGAGGATTCCAC+AGG 0.558753 1_1:+48337394 Msa0025330:CDS
AAGACACAAGTGAAGAGCTA+CGG 0.560001 1_1:+48337635 Msa0025330:CDS
CCTAAGTGAGTTGGAAGCCA+AGG 0.560218 1_1:+48338836 Msa0025330:CDS
CTGCATATTTAAGGCTCATG+TGG 0.561749 1_1:-48341912 None:intergenic
GATGCAAATGGAGAAGATTG+TGG 0.563296 1_1:+48339406 Msa0025330:CDS
ACCTGTTAATGATGATCAGA+AGG 0.563385 1_1:+48340231 Msa0025330:CDS
TTGGAAGATTCAATATCTCA+AGG 0.563812 1_1:+48337862 Msa0025330:CDS
TGAACTATGTGAAGATCTGA+AGG 0.565445 1_1:+48339961 Msa0025330:CDS
TACTTGATGAGTTGACCTCA+AGG 0.566693 1_1:-48338782 None:intergenic
TTCTCCACATACATGAGTGA+TGG 0.568481 1_1:+48337427 Msa0025330:CDS
AAGTCAACAAATAGAACAGT+TGG 0.569407 1_1:+48338134 Msa0025330:CDS
TCAACAAATAGAACAGTTGG+AGG 0.572016 1_1:+48338137 Msa0025330:CDS
TATGGTGCAAGAACTGGAAG+AGG 0.577822 1_1:+48338182 Msa0025330:CDS
TCACAGGTGGAAAGTGAGCA+TGG 0.578671 1_1:+48340617 Msa0025330:intron
TTGTTCAAGATGATAAACCT+TGG 0.581068 1_1:-48338853 None:intergenic
ATTCTACATATGCTGTTGAA+AGG 0.581578 1_1:-48337768 None:intergenic
ATACGAAAGACAACAATACA+TGG 0.583728 1_1:+48339805 Msa0025330:CDS
TGAACGCCAGAAAGCTGTTG+GGG 0.584160 1_1:+48337680 Msa0025330:CDS
AAGAGACGCAAGATGTGCCC+AGG 0.584804 1_1:+48340111 Msa0025330:CDS
GGAGAAATTTCCCTTTCCTG+TGG 0.586809 1_1:-48337410 None:intergenic
TCTCAGGGATCAAGAATCAA+GGG 0.586974 1_1:+48336798 Msa0025330:intron
ATTTAAAATGGAAATGCTGA+TGG 0.589431 1_1:+48339679 Msa0025330:CDS
TACGGGCAGAAGCAAAGATG+TGG 0.598071 1_1:+48337653 Msa0025330:CDS
AAATAGGAATCATATAGTGA+AGG 0.598258 1_1:+48339364 Msa0025330:CDS
TCCTGCAGGTCATCATCTCA+AGG 0.603501 1_1:+48341763 Msa0025330:intron
TGCAAAGTCAAGCAAAGTCA+CGG 0.610444 1_1:+48336097 Msa0025330:five_prime_UTR
GAGCCTTAAATATGCAGAGG+TGG 0.611103 1_1:+48341918 Msa0025330:CDS
TCTAAATCAGCACAAGAAGT+CGG 0.611494 1_1:+48338708 Msa0025330:CDS
TGATGATTACTGTGAAAGAG+TGG 0.612656 1_1:+48339250 Msa0025330:CDS
AATTTAACTTCAGAGATGGA+TGG 0.613832 1_1:+48339329 Msa0025330:CDS
AAAATTGTCAGAGCTGGTGG+AGG 0.614393 1_1:+48339712 Msa0025330:CDS
ATAACAGATTTAAAACTATG+TGG 0.616522 1_1:-48342080 None:intergenic
AAGTAAAGAAAAGGAGATTG+GGG 0.616752 1_1:+48338800 Msa0025330:CDS
AAGATCTGGAATCCTGGGAG+AGG 0.617399 1_1:+48336324 Msa0025330:CDS
GTTAGCAGGTACCAAAGGGG+TGG 0.618021 1_1:+48336027 Msa0025330:five_prime_UTR
ACAAGATAAACTTCAACTAG+AGG 0.620249 1_1:+48338872 Msa0025330:CDS
GAGTGATGGACAGAGCCGGA+CGG 0.623508 1_1:+48337441 Msa0025330:CDS
ATCTGAGATGGAAAACCTTG+AGG 0.623817 1_1:+48338767 Msa0025330:CDS
GAGTAATACTGAAACCATAA+CGG 0.625872 1_1:+48342147 Msa0025330:three_prime_UTR
ACATGAGTGATGGACAGAGC+CGG 0.627982 1_1:+48337437 Msa0025330:CDS
CTTCTTATAAGATGATGCAC+CGG 0.628745 1_1:-48337578 None:intergenic
TCATCTTATAAGAAGACCAA+TGG 0.630420 1_1:+48337586 Msa0025330:CDS
TTAGCAGGTACCAAAGGGGT+GGG 0.638356 1_1:+48336028 Msa0025330:five_prime_UTR
AGAACTTGTAATGAAGCTCA+AGG 0.638966 1_1:+48341954 Msa0025330:CDS
ACGTACAAAATCAATGCTAG+AGG 0.640837 1_1:+48341858 Msa0025330:CDS
ACTTCAACTAGAGGAGCACA+TGG 0.641782 1_1:+48338881 Msa0025330:CDS
AGAGTCCATATCACCAACAG+AGG 0.642774 1_1:-48336926 None:intergenic
TCCCAAAATATGCAAGACAC+CGG 0.646873 1_1:+48337559 Msa0025330:CDS
ACGGGCAGAAGCAAAGATGT+GGG 0.648492 1_1:+48337654 Msa0025330:CDS
GAACGCCAGAAAGCTGTTGG+GGG 0.651959 1_1:+48337681 Msa0025330:CDS
GATGATTACTGTGAAAGAGT+GGG 0.655984 1_1:+48339251 Msa0025330:CDS
GAGAAGAGTTATTATTAACA+GGG 0.657392 1_1:-48337513 None:intergenic
CATGAGCCTTAAATATGCAG+AGG 0.671496 1_1:+48341915 Msa0025330:CDS
TGCGAAATGGAAGTTGTCAG+TGG 0.678162 1_1:+48336120 Msa0025330:five_prime_UTR
ATAGTTGGTCATACTAACTG+TGG 0.684689 1_1:-48336347 None:intergenic
TTCAGAAGACATGCTCCCTG+AGG 0.688861 1_1:+48338629 Msa0025330:CDS
GAAGAATGTGAATATCTCAG+AGG 0.698361 1_1:+48339074 Msa0025330:CDS
ACTTGTAATGAAGCTCAAGG+TGG 0.701378 1_1:+48341957 Msa0025330:CDS
AAGACCGATTCAAAAGATGG+AGG 0.703694 1_1:+48338513 Msa0025330:CDS
GTTTGAAATGAAATTCTGTG+TGG 0.704380 1_1:+48335948 None:intergenic
TTACAGCTATAACTCAGCCG+AGG 0.705059 1_1:+48337384 Msa0025330:CDS
CAGCAGGAAACATCAGACTG+AGG 0.735534 1_1:+48340440 Msa0025330:CDS
TCAACTAGAGGAGCACATGG+AGG 0.736506 1_1:+48338884 Msa0025330:CDS
AAGGCTCCAAGAGAAGATTG+CGG 0.741014 1_1:+48338968 Msa0025330:CDS
AATGTTAGCAGGTACCAAAG+GGG 0.753582 1_1:+48336024 Msa0025330:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCACTATTTAATGTAATAAT+AGG - chr1_1:48336766-48336785 None:intergenic 15.0%
!!! TTTTTTGAAATAATTTTGAG+TGG + chr1_1:48337137-48337156 Msa0025330:intron 15.0%
!!! TTTTTTACATAAACAACTAT+AGG + chr1_1:48341374-48341393 Msa0025330:intron 15.0%
!! TATAATTGGATTTAAATAGT+TGG - chr1_1:48341556-48341575 None:intergenic 15.0%
!! ATAAAATATTAAAACAAGAC+TGG - chr1_1:48342020-48342039 None:intergenic 15.0%
!!! TAAATATCAGAAATTTTGAA+AGG + chr1_1:48342176-48342195 Msa0025330:three_prime_UTR 15.0%
!!! TTTATCAGTTTGAAATAACA+GGG + chr1_1:48336295-48336314 Msa0025330:intron 20.0%
!! ACTTCATGCTTAAAAATATA+TGG + chr1_1:48336537-48336556 Msa0025330:intron 20.0%
!! GGATATAAACATATGTATTT+AGG + chr1_1:48336594-48336613 Msa0025330:intron 20.0%
!! ATAAACATATGTATTTAGGT+AGG + chr1_1:48336598-48336617 Msa0025330:intron 20.0%
!! TATATTTGACAAAAGATCTT+TGG - chr1_1:48338544-48338563 None:intergenic 20.0%
!!! TGCTGATTTCAAATTTAAAA+TGG + chr1_1:48339667-48339686 Msa0025330:CDS 20.0%
!! TCAATTTGAAAATGAGATTA+TGG + chr1_1:48339868-48339887 Msa0025330:CDS 20.0%
!!! TTATTTTGAATCACTTTAAG+AGG + chr1_1:48340899-48340918 Msa0025330:intron 20.0%
!!! TTACTTTTCAAACTTTTACA+TGG - chr1_1:48341131-48341150 None:intergenic 20.0%
!! GAGATAATTAATCACAAATT+TGG - chr1_1:48341182-48341201 None:intergenic 20.0%
!! TGATTAATTATCTCTTAGTA+TGG + chr1_1:48341188-48341207 Msa0025330:intron 20.0%
!!! TTTAGATAAGTTTTTCTACT+GGG - chr1_1:48341226-48341245 None:intergenic 20.0%
!!! TTTTAGATAAGTTTTTCTAC+TGG - chr1_1:48341227-48341246 None:intergenic 20.0%
!! AGTAGAAAAACTTATCTAAA+AGG + chr1_1:48341226-48341245 Msa0025330:intron 20.0%
!! GTAAAAAACACAATCATTTA+TGG - chr1_1:48341362-48341381 None:intergenic 20.0%
!!! AATCAAAGGTATAATACAAA+TGG - chr1_1:48341683-48341702 None:intergenic 20.0%
!!! TGTATTATACCTTTGATTTT+AGG + chr1_1:48341685-48341704 Msa0025330:intron 20.0%
!!! ATAACAGATTTAAAACTATG+TGG - chr1_1:48342083-48342102 None:intergenic 20.0%
!!! CATAGTTTTAAATCTGTTAT+AGG + chr1_1:48342083-48342102 Msa0025330:three_prime_UTR 20.0%
!!! TATAGTAGTATACTTTTGAA+AGG + chr1_1:48342109-48342128 Msa0025330:three_prime_UTR 20.0%
!!! ATAGTAGTATACTTTTGAAA+GGG + chr1_1:48342110-48342129 Msa0025330:three_prime_UTR 20.0%
!!! CAATCATAATATCATTTTCT+TGG - chr1_1:48342212-48342231 None:intergenic 20.0%
! AATTGAATTCTAATGTTAGC+AGG + chr1_1:48336013-48336032 Msa0025330:five_prime_UTR 25.0%
!! ATACTTTTGCAGAATCTATA+TGG + chr1_1:48336147-48336166 Msa0025330:five_prime_UTR 25.0%
!! CTTTATCAGTTTGAAATAAC+AGG + chr1_1:48336294-48336313 Msa0025330:intron 25.0%
! CTATGTATTATGTGCATAAA+AGG + chr1_1:48336459-48336478 Msa0025330:intron 25.0%
! CTGTACAATGAATTACTTTA+AGG - chr1_1:48337192-48337211 None:intergenic 25.0%
! GAGAAGAGTTATTATTAACA+GGG - chr1_1:48337516-48337535 None:intergenic 25.0%
! TGAGAAGAGTTATTATTAAC+AGG - chr1_1:48337517-48337536 None:intergenic 25.0%
!! AAGACTTTTATTAGAACCAT+TGG - chr1_1:48337605-48337624 None:intergenic 25.0%
!!! AAAGTTTTTTGTCTCACTAT+TGG - chr1_1:48337844-48337863 None:intergenic 25.0%
! AATAGTGAGACAAAAAACTT+TGG + chr1_1:48337843-48337862 Msa0025330:CDS 25.0%
!!! TCTTGAATTGATTTTCTGTT+TGG - chr1_1:48338249-48338268 None:intergenic 25.0%
! AAACAAATTATCTGCTAAAG+AGG + chr1_1:48338287-48338306 Msa0025330:CDS 25.0%
!! AGTATTGAATAAGAAAGTTC+AGG + chr1_1:48338422-48338441 Msa0025330:CDS 25.0%
!! TTTTTGTTCCAAATCTTCTA+TGG - chr1_1:48339018-48339037 None:intergenic 25.0%
!! AGATTTGGAACAAAAACTAA+AGG + chr1_1:48339022-48339041 Msa0025330:CDS 25.0%
! TAAAGGAAACACAATTTCAT+TGG + chr1_1:48339039-48339058 Msa0025330:CDS 25.0%
!! TTCTTCTTCAAGATTTTCAA+TGG - chr1_1:48339123-48339142 None:intergenic 25.0%
!!! ATGGTATTTTGGATGAAAAT+AGG + chr1_1:48339348-48339367 Msa0025330:CDS 25.0%
! AAATAGGAATCATATAGTGA+AGG + chr1_1:48339364-48339383 Msa0025330:CDS 25.0%
! AATAGGAATCATATAGTGAA+GGG + chr1_1:48339365-48339384 Msa0025330:CDS 25.0%
!!! GATTCTCTATTTCTAGTTTA+AGG - chr1_1:48339442-48339461 None:intergenic 25.0%
!! ATTTAAAATGGAAATGCTGA+TGG + chr1_1:48339679-48339698 Msa0025330:CDS 25.0%
! AGAAGAATTGAAACTGATTA+AGG + chr1_1:48340171-48340190 Msa0025330:CDS 25.0%
! TTGAACTTCATATATGTCAA+TGG - chr1_1:48340732-48340751 None:intergenic 25.0%
! TATATGAAGTTCAACTTAAC+AGG + chr1_1:48340738-48340757 Msa0025330:CDS 25.0%
! TTACAAAAACCTTTATCACT+AGG + chr1_1:48340872-48340891 Msa0025330:intron 25.0%
!!! TATGACAATTCTAGCTTATT+AGG + chr1_1:48341022-48341041 Msa0025330:intron 25.0%
!! TTAGATAAGTTTTTCTACTG+GGG - chr1_1:48341225-48341244 None:intergenic 25.0%
! GTTTGGGAAAGAAAAAAAAA+AGG + chr1_1:48341274-48341293 Msa0025330:intron 25.0%
! AAAAACACAATCATTTATGG+AGG - chr1_1:48341359-48341378 None:intergenic 25.0%
!! TATAGGATCCGATTTTTATT+TGG + chr1_1:48341391-48341410 Msa0025330:intron 25.0%
! CAACTGAACCAAATAAAAAT+CGG - chr1_1:48341402-48341421 None:intergenic 25.0%
!!! GTTTTATTCTCTTTAGCAAT+TGG + chr1_1:48341440-48341459 Msa0025330:intron 25.0%
! TACACATGGATAATTCATTT+AGG + chr1_1:48341500-48341519 Msa0025330:intron 25.0%
! ACACATGGATAATTCATTTA+GGG + chr1_1:48341501-48341520 Msa0025330:intron 25.0%
!! TATTTTATGCTGAAAATCTC+AGG + chr1_1:48342032-48342051 Msa0025330:three_prime_UTR 25.0%
! AATCAGTCCTTTCTTTTTGT+AGG - chr1_1:48335974-48335993 None:intergenic 30.0%
! TTCAAGAGATAATTTGTCCA+AGG + chr1_1:48336172-48336191 Msa0025330:five_prime_UTR 30.0%
CTGATAAAGTTAACAGCAAA+AGG - chr1_1:48336283-48336302 None:intergenic 30.0%
GTTAGATATAGTCAGATAGA+TGG + chr1_1:48336573-48336592 Msa0025330:intron 30.0%
GAATTTCAAACTCTGTTCAA+TGG - chr1_1:48336644-48336663 None:intergenic 30.0%
GGAAACAAATTCTCATTTGA+AGG + chr1_1:48336819-48336838 Msa0025330:CDS 30.0%
!! GAAATAATTTTGAGTGGAGA+TGG + chr1_1:48337143-48337162 Msa0025330:intron 30.0%
TCATCTTATAAGAAGACCAA+TGG + chr1_1:48337586-48337605 Msa0025330:CDS 30.0%
ATTCTACATATGCTGTTGAA+AGG - chr1_1:48337771-48337790 None:intergenic 30.0%
TTGGAAGATTCAATATCTCA+AGG + chr1_1:48337862-48337881 Msa0025330:CDS 30.0%
!! TTTAGAGCGTTTTCAATTTC+TGG - chr1_1:48337898-48337917 None:intergenic 30.0%
CTTTAGTTGCAAAGACAAAT+TGG - chr1_1:48337953-48337972 None:intergenic 30.0%
AAGTCAACAAATAGAACAGT+TGG + chr1_1:48338134-48338153 Msa0025330:CDS 30.0%
ACCATCATTACTAATCTTCT+TGG - chr1_1:48338661-48338680 None:intergenic 30.0%
CAACTCATCAAGTAAAGAAA+AGG + chr1_1:48338791-48338810 Msa0025330:CDS 30.0%
TCAAGTAAAGAAAAGGAGAT+TGG + chr1_1:48338798-48338817 Msa0025330:CDS 30.0%
CAAGTAAAGAAAAGGAGATT+GGG + chr1_1:48338799-48338818 Msa0025330:CDS 30.0%
AAGTAAAGAAAAGGAGATTG+GGG + chr1_1:48338800-48338819 Msa0025330:CDS 30.0%
TTGTTCAAGATGATAAACCT+TGG - chr1_1:48338856-48338875 None:intergenic 30.0%
ACAAGATAAACTTCAACTAG+AGG + chr1_1:48338872-48338891 Msa0025330:CDS 30.0%
GATTCATTTGAGAAGCTAAA+TGG + chr1_1:48339146-48339165 Msa0025330:CDS 30.0%
AGAAGCTAAATGGATATTTG+AGG + chr1_1:48339156-48339175 Msa0025330:CDS 30.0%
! TCAAAGCAAACTTCTTTTCT+AGG - chr1_1:48339280-48339299 None:intergenic 30.0%
! GAAGAATTTAACTTCAGAGA+TGG + chr1_1:48339325-48339344 Msa0025330:CDS 30.0%
! AATTTAACTTCAGAGATGGA+TGG + chr1_1:48339329-48339348 Msa0025330:CDS 30.0%
CTTATTGAATCAGATGCAAA+TGG + chr1_1:48339394-48339413 Msa0025330:CDS 30.0%
! TATTCTCTCCTTTTCATCAT+AGG - chr1_1:48339486-48339505 None:intergenic 30.0%
TGATAAAGCCAAATTGGAAT+CGG + chr1_1:48339544-48339563 Msa0025330:CDS 30.0%
!!! GTCTGTAAGTTTTGATTCAA+GGG - chr1_1:48339780-48339799 None:intergenic 30.0%
!!! TGTCTGTAAGTTTTGATTCA+AGG - chr1_1:48339781-48339800 None:intergenic 30.0%
ATACGAAAGACAACAATACA+TGG + chr1_1:48339805-48339824 Msa0025330:CDS 30.0%
CAGTTTCAATTCTTCTTCAA+GGG - chr1_1:48340167-48340186 None:intergenic 30.0%
TCAGTTTCAATTCTTCTTCA+AGG - chr1_1:48340168-48340187 None:intergenic 30.0%
ATCAAGTTTCAAAGCTAAAC+AGG + chr1_1:48340206-48340225 Msa0025330:CDS 30.0%
! AAAAGAGACACTAACTTTTG+AGG - chr1_1:48340257-48340276 None:intergenic 30.0%
!!! TAGTGTCTCTTTTTCAGTAA+TGG + chr1_1:48340264-48340283 Msa0025330:intron 30.0%
! TCTCTGTCATTCTTTAAAGA+TGG - chr1_1:48340390-48340409 None:intergenic 30.0%
! AGGTTACCAAGTATATTTTG+TGG + chr1_1:48340508-48340527 Msa0025330:intron 30.0%
TCAAATAATTGCACTCTAAC+TGG + chr1_1:48340560-48340579 Msa0025330:intron 30.0%
! AGTAAACACCTAAAAGCTTT+TGG + chr1_1:48340788-48340807 Msa0025330:intron 30.0%
AAAAACCTTTATCACTAGGT+GGG + chr1_1:48340876-48340895 Msa0025330:intron 30.0%
! AAAGAAAGGATGTTTGAGAT+TGG + chr1_1:48340939-48340958 Msa0025330:intron 30.0%
CACTTGTAGTTGTACAAATT+AGG + chr1_1:48340974-48340993 Msa0025330:intron 30.0%
! ATGTTTAAGGTTAAGCCAAT+AGG + chr1_1:48341061-48341080 Msa0025330:intron 30.0%
!!! ACTTTTTAGAGCCTTAACAA+TGG + chr1_1:48341250-48341269 Msa0025330:intron 30.0%
TTATTCTCTTTAGCAATTGG+TGG + chr1_1:48341443-48341462 Msa0025330:intron 30.0%
TATTCTCTTTAGCAATTGGT+GGG + chr1_1:48341444-48341463 Msa0025330:intron 30.0%
AATCCAATTATAAAGCAGCA+AGG + chr1_1:48341564-48341583 Msa0025330:intron 30.0%
!! ATACCTTGCTGCTTTATAAT+TGG - chr1_1:48341570-48341589 None:intergenic 30.0%
ATAATACAAATGGCTTAAGC+AGG - chr1_1:48341673-48341692 None:intergenic 30.0%
AAATGGCCTAGTAAAATCAA+TGG + chr1_1:48341801-48341820 Msa0025330:CDS 30.0%
CACTTCAAATTCGTGTTATA+AGG - chr1_1:48342060-48342079 None:intergenic 30.0%
!! ATACTTTTGAAAGGGATCAT+TGG + chr1_1:48342118-48342137 Msa0025330:three_prime_UTR 30.0%
GAGTAATACTGAAACCATAA+CGG + chr1_1:48342147-48342166 Msa0025330:three_prime_UTR 30.0%
TAATGTTAGCAGGTACCAAA+GGG + chr1_1:48336023-48336042 Msa0025330:five_prime_UTR 35.0%
TCTGTTGTCTCTGTAGAAAA+TGG + chr1_1:48336065-48336084 Msa0025330:five_prime_UTR 35.0%
AATACAATCATCAGTCTCCT+TGG - chr1_1:48336192-48336211 None:intergenic 35.0%
TAACAGGGATCATTAAGATC+TGG + chr1_1:48336310-48336329 Msa0025330:intron 35.0%
! ATCATTAAGATCTGGAATCC+TGG + chr1_1:48336318-48336337 Msa0025330:CDS 35.0%
! TCATTAAGATCTGGAATCCT+GGG + chr1_1:48336319-48336338 Msa0025330:CDS 35.0%
ATAGTTGGTCATACTAACTG+TGG - chr1_1:48336350-48336369 None:intergenic 35.0%
TTATTTAGCGGGATTGAAAG+TGG - chr1_1:48336394-48336413 None:intergenic 35.0%
CATGATTGCACTTATTTAGC+GGG - chr1_1:48336405-48336424 None:intergenic 35.0%
CCATGATTGCACTTATTTAG+CGG - chr1_1:48336406-48336425 None:intergenic 35.0%
CGCTAAATAAGTGCAATCAT+GGG + chr1_1:48336404-48336423 Msa0025330:CDS 35.0%
! GGCATTTTCTGTCAAATTTG+AGG + chr1_1:48336480-48336499 Msa0025330:intron 35.0%
! GAACAGAGTTTGAAATTCAG+TGG + chr1_1:48336646-48336665 Msa0025330:intron 35.0%
! TCAGTGGTTATGTATTTTGC+AGG + chr1_1:48336662-48336681 Msa0025330:intron 35.0%
!!! TGGGTTTTTTTCTTGGTGTA+AGG - chr1_1:48336701-48336720 None:intergenic 35.0%
TTACACCAAGAAAAAAACCC+AGG + chr1_1:48336700-48336719 Msa0025330:CDS 35.0%
!!! ACAAACCTGGGTTTTTTTCT+TGG - chr1_1:48336708-48336727 None:intergenic 35.0%
TGATCTCTTGCATATTCTCA+GGG + chr1_1:48336783-48336802 Msa0025330:intron 35.0%
!! TACAATAGAGCACTGAAGAT+AGG - chr1_1:48337001-48337020 None:intergenic 35.0%
TCAGTGCTCTATTGTACATA+TGG + chr1_1:48337005-48337024 Msa0025330:intron 35.0%
TATGTACCAATATGCATGCA+TGG - chr1_1:48337045-48337064 None:intergenic 35.0%
AAGCAGTGTTTGCATACATA+AGG - chr1_1:48337118-48337137 None:intergenic 35.0%
GTAACTGCATTTCATCCTTT+GGG + chr1_1:48337165-48337184 Msa0025330:intron 35.0%
! GAATTACTTTAAGGACCCAA+AGG - chr1_1:48337183-48337202 None:intergenic 35.0%
TACAGAGTTGTCTTCAATCA+GGG + chr1_1:48337207-48337226 Msa0025330:intron 35.0%
AGTGAATTATGTCACTACCA+TGG - chr1_1:48337283-48337302 None:intergenic 35.0%
GATACTAACACTATGTACCT+TGG + chr1_1:48337326-48337345 Msa0025330:intron 35.0%
CTGTAATTTGATACAGAACC+AGG - chr1_1:48337370-48337389 None:intergenic 35.0%
!! GTAATGGGATACACTTTTCT+GGG - chr1_1:48337488-48337507 None:intergenic 35.0%
ATTAACAGGGTAGTCGTAAT+GGG - chr1_1:48337503-48337522 None:intergenic 35.0%
TATTAACAGGGTAGTCGTAA+TGG - chr1_1:48337504-48337523 None:intergenic 35.0%
CTTCTTATAAGATGATGCAC+CGG - chr1_1:48337581-48337600 None:intergenic 35.0%
CTCAGATCAATCCAAAAAGA+TGG + chr1_1:48337729-48337748 Msa0025330:CDS 35.0%
GATCAATCCAAAAAGATGGA+AGG + chr1_1:48337733-48337752 Msa0025330:CDS 35.0%
TTGCAAAGACAAATTGGCAT+TGG - chr1_1:48337947-48337966 None:intergenic 35.0%
!!! GTTTTGAGGGTAATGATGAA+AGG - chr1_1:48338062-48338081 None:intergenic 35.0%
TCAACAAATAGAACAGTTGG+AGG + chr1_1:48338137-48338156 Msa0025330:CDS 35.0%
GGAATCAAAGAAAAATCTGC+TGG + chr1_1:48338158-48338177 Msa0025330:CDS 35.0%
! AAAGAAAAATCTGCTGGCTA+TGG + chr1_1:48338164-48338183 Msa0025330:CDS 35.0%
TCAGCTTGAATAAAAGCTCA+AGG - chr1_1:48338485-48338504 None:intergenic 35.0%
GCCAAGAAGATTAGTAATGA+TGG + chr1_1:48338657-48338676 Msa0025330:CDS 35.0%
TCTAAATCAGCACAAGAAGT+CGG + chr1_1:48338708-48338727 Msa0025330:CDS 35.0%
AACTGATGAAACATCTGAGA+TGG + chr1_1:48338755-48338774 Msa0025330:CDS 35.0%
ACGCAAAAAATCAATCTGCA+AGG + chr1_1:48338949-48338968 Msa0025330:CDS 35.0%
GGATTCTTCCATAGAAGATT+TGG + chr1_1:48339007-48339026 Msa0025330:CDS 35.0%
GAAGAATGTGAATATCTCAG+AGG + chr1_1:48339074-48339093 Msa0025330:CDS 35.0%
! ATATTTGAGGCAGCAAAAGT+TGG + chr1_1:48339169-48339188 Msa0025330:CDS 35.0%
TGATGATTACTGTGAAAGAG+TGG + chr1_1:48339250-48339269 Msa0025330:CDS 35.0%
GATGATTACTGTGAAAGAGT+GGG + chr1_1:48339251-48339270 Msa0025330:CDS 35.0%
! AAAGAAGTTTGCTTTGATGC+TGG + chr1_1:48339283-48339302 Msa0025330:CDS 35.0%
! TTCAGAGATGGATGGTATTT+TGG + chr1_1:48339337-48339356 Msa0025330:CDS 35.0%
! AGTGATTTTGTCGAAGAATG+AGG + chr1_1:48339589-48339608 Msa0025330:CDS 35.0%
ACATGAAAAATTGTCAGAGC+TGG + chr1_1:48339706-48339725 Msa0025330:CDS 35.0%
GGATGAATCCAGAAATTTGA+AGG + chr1_1:48339826-48339845 Msa0025330:CDS 35.0%
CAACTGAACCTTCAAATTTC+TGG - chr1_1:48339837-48339856 None:intergenic 35.0%
TGAACTATGTGAAGATCTGA+AGG + chr1_1:48339961-48339980 Msa0025330:CDS 35.0%
AAGGCAGAGAATACATCATT+TGG + chr1_1:48339980-48339999 Msa0025330:CDS 35.0%
! CTGAAGCTTAGATTTTTCCT+GGG - chr1_1:48340131-48340150 None:intergenic 35.0%
ACCTGTTAATGATGATCAGA+AGG + chr1_1:48340231-48340250 Msa0025330:CDS 35.0%
ATGGCATGATATCATTGTGA+TGG + chr1_1:48340283-48340302 Msa0025330:intron 35.0%
AGAAATCCTGAAAGATCAAC+AGG + chr1_1:48340407-48340426 Msa0025330:CDS 35.0%
GATGTTTCCTGCTGTTATAA+GGG - chr1_1:48340434-48340453 None:intergenic 35.0%
TGATGTTTCCTGCTGTTATA+AGG - chr1_1:48340435-48340454 None:intergenic 35.0%
!! TTGTTTTACCTCCTTGTCAA+AGG + chr1_1:48340488-48340507 Msa0025330:intron 35.0%
! ATACTTGGTAACCTTTGACA+AGG - chr1_1:48340502-48340521 None:intergenic 35.0%
CTGAAGCCACAAAATATACT+TGG - chr1_1:48340517-48340536 None:intergenic 35.0%
AGCAATTGAGTCTTTGATAC+AGG - chr1_1:48340680-48340699 None:intergenic 35.0%
CAAAAACCTTTATCACTAGG+TGG + chr1_1:48340875-48340894 Msa0025330:intron 35.0%
AATAACCCACCTAGTGATAA+AGG - chr1_1:48340884-48340903 None:intergenic 35.0%
TTTCCGATCTCTTGAAAGAA+AGG + chr1_1:48340925-48340944 Msa0025330:intron 35.0%
CATCCTTTCTTTCAAGAGAT+CGG - chr1_1:48340931-48340950 None:intergenic 35.0%
ATGTCTGTCCAGAATGTTTA+AGG + chr1_1:48341048-48341067 Msa0025330:intron 35.0%
TGGCTTAACCTTAAACATTC+TGG - chr1_1:48341059-48341078 None:intergenic 35.0%
TTTCCCAAACTCCATTGTTA+AGG - chr1_1:48341264-48341283 None:intergenic 35.0%
!! ATTATTTGGTAGACTGGTCT+TGG - chr1_1:48341328-48341347 None:intergenic 35.0%
CTAGACATTATTTGGTAGAC+TGG - chr1_1:48341334-48341353 None:intergenic 35.0%
TGGAGGAACTAGACATTATT+TGG - chr1_1:48341342-48341361 None:intergenic 35.0%
ATTCTCTTTAGCAATTGGTG+GGG + chr1_1:48341445-48341464 Msa0025330:intron 35.0%
!! CCTAAACTAAAGGTATCACA+TGG - chr1_1:48341595-48341614 None:intergenic 35.0%
! CCATGTGATACCTTTAGTTT+AGG + chr1_1:48341592-48341611 Msa0025330:intron 35.0%
! GTGATACCTTTAGTTTAGGT+TGG + chr1_1:48341596-48341615 Msa0025330:intron 35.0%
TTCCTGCAATCCTGATTTAT+AGG - chr1_1:48341628-48341647 None:intergenic 35.0%
AACGGATGACCTAAAATCAA+AGG - chr1_1:48341697-48341716 None:intergenic 35.0%
ATGACTTCGTAGAGCAATAA+CGG - chr1_1:48341715-48341734 None:intergenic 35.0%
! ATTTTACTAGGCCATTTGCA+TGG - chr1_1:48341798-48341817 None:intergenic 35.0%
!!! CTTCAGCCATTGATTTTACT+AGG - chr1_1:48341810-48341829 None:intergenic 35.0%
ACGTACAAAATCAATGCTAG+AGG + chr1_1:48341858-48341877 Msa0025330:CDS 35.0%
ATTCCACCTCTGCATATTTA+AGG - chr1_1:48341924-48341943 None:intergenic 35.0%
AGAACTTGTAATGAAGCTCA+AGG + chr1_1:48341954-48341973 Msa0025330:CDS 35.0%
AAGGTGGCTAAAAGCAAAAA+AGG + chr1_1:48341973-48341992 Msa0025330:CDS 35.0%
TGGCTAAAAGCAAAAAAGGA+TGG + chr1_1:48341977-48341996 Msa0025330:CDS 35.0%
! TTTGAAAGGGATCATTGGTT+AGG + chr1_1:48342123-48342142 Msa0025330:three_prime_UTR 35.0%
GATATTTACGATGACCGTTA+TGG - chr1_1:48342164-48342183 None:intergenic 35.0%
TGTGTGGCCTACAAAAAGAA+AGG + chr1_1:48335964-48335983 Msa0025330:five_prime_UTR 40.0%
CTAATGTTAGCAGGTACCAA+AGG + chr1_1:48336022-48336041 Msa0025330:five_prime_UTR 40.0%
AATGTTAGCAGGTACCAAAG+GGG + chr1_1:48336024-48336043 Msa0025330:five_prime_UTR 40.0%
TGCAAAGTCAAGCAAAGTCA+CGG + chr1_1:48336097-48336116 Msa0025330:five_prime_UTR 40.0%
TCTCAAGCTCATTGTTGCAA+TGG + chr1_1:48336211-48336230 Msa0025330:exon 40.0%
CCGCTAAATAAGTGCAATCA+TGG + chr1_1:48336403-48336422 Msa0025330:CDS 40.0%
AAAACCCAGGTTTGTATCGA+AGG + chr1_1:48336713-48336732 Msa0025330:intron 40.0%
AAACCCAGGTTTGTATCGAA+GGG + chr1_1:48336714-48336733 Msa0025330:intron 40.0%
GTGATCTCTTGCATATTCTC+AGG + chr1_1:48336782-48336801 Msa0025330:intron 40.0%
TTCTCAGGGATCAAGAATCA+AGG + chr1_1:48336797-48336816 Msa0025330:intron 40.0%
TCTCAGGGATCAAGAATCAA+GGG + chr1_1:48336798-48336817 Msa0025330:intron 40.0%
GAAGTGACTGTCAAGTCAAA+TGG + chr1_1:48336868-48336887 Msa0025330:CDS 40.0%
! AGTGTTGAATCTTCCTCTGT+TGG + chr1_1:48336913-48336932 Msa0025330:CDS 40.0%
!! ATCTTCCTCTGTTGGTGATA+TGG + chr1_1:48336921-48336940 Msa0025330:CDS 40.0%
CTCAACTTCTTCAGGTGATA+AGG - chr1_1:48336953-48336972 None:intergenic 40.0%
ACCTGAAGAAGTTGAGACTA+TGG + chr1_1:48336957-48336976 Msa0025330:CDS 40.0%
ACCATAGTCTCAACTTCTTC+AGG - chr1_1:48336961-48336980 None:intergenic 40.0%
GTTTGCATACATAAGGCTAC+AGG - chr1_1:48337111-48337130 None:intergenic 40.0%
GGTAACTGCATTTCATCCTT+TGG + chr1_1:48337164-48337183 Msa0025330:intron 40.0%
GTACAGAGTTGTCTTCAATC+AGG + chr1_1:48337206-48337225 Msa0025330:intron 40.0%
TTCTCCACATACATGAGTGA+TGG + chr1_1:48337427-48337446 Msa0025330:CDS 40.0%
!! CGTAATGGGATACACTTTTC+TGG - chr1_1:48337489-48337508 None:intergenic 40.0%
TCCCAAAATATGCAAGACAC+CGG + chr1_1:48337559-48337578 Msa0025330:CDS 40.0%
! ACCGGTGTCTTGCATATTTT+GGG - chr1_1:48337563-48337582 None:intergenic 40.0%
AAGACACAAGTGAAGAGCTA+CGG + chr1_1:48337635-48337654 Msa0025330:CDS 40.0%
ATCCAAAAAGATGGAAGGTC+TGG + chr1_1:48337738-48337757 Msa0025330:CDS 40.0%
! TTCCAGACCTTCCATCTTTT+TGG - chr1_1:48337743-48337762 None:intergenic 40.0%
AAAGATGGAAGGTCTGGAAA+TGG + chr1_1:48337744-48337763 Msa0025330:CDS 40.0%
GAGCAGTTAACATTGTCATC+AGG + chr1_1:48337814-48337833 Msa0025330:CDS 40.0%
CAAGCTCAACATTTGCTTCT+TGG - chr1_1:48337981-48338000 None:intergenic 40.0%
CTCAAGTTTCTGCTGTTCTA+TGG - chr1_1:48338031-48338050 None:intergenic 40.0%
TCTTTCCAGACAAGTGAAGA+AGG + chr1_1:48338099-48338118 Msa0025330:CDS 40.0%
TGTTTCCTTCTTCACTTGTC+TGG - chr1_1:48338107-48338126 None:intergenic 40.0%
GAGACTGTGTCAAGAAATGT+AGG + chr1_1:48338372-48338391 Msa0025330:CDS 40.0%
! TGTAGGTGATGCAGATCTTT+TGG + chr1_1:48338389-48338408 Msa0025330:CDS 40.0%
GAAAGTTCAGGAACTTGAGA+TGG + chr1_1:48338434-48338453 Msa0025330:CDS 40.0%
! GCAAAGACCGATTCAAAAGA+TGG + chr1_1:48338510-48338529 Msa0025330:CDS 40.0%
! AAGACCGATTCAAAAGATGG+AGG + chr1_1:48338513-48338532 Msa0025330:CDS 40.0%
! TGCACCTCCATCTTTTGAAT+CGG - chr1_1:48338520-48338539 None:intergenic 40.0%
! TCTTCTTGGCATTTTCCTCA+GGG - chr1_1:48338647-48338666 None:intergenic 40.0%
! ATCTTCTTGGCATTTTCCTC+AGG - chr1_1:48338648-48338667 None:intergenic 40.0%
! ATCTGAGATGGAAAACCTTG+AGG + chr1_1:48338767-48338786 Msa0025330:CDS 40.0%
! TACTTGATGAGTTGACCTCA+AGG - chr1_1:48338785-48338804 None:intergenic 40.0%
GAAAAAGCTCCTAAGTGAGT+TGG + chr1_1:48338827-48338846 Msa0025330:CDS 40.0%
GATGCAAATGGAGAAGATTG+TGG + chr1_1:48339406-48339425 Msa0025330:CDS 40.0%
TTCAGCAGCCTATGATGAAA+AGG + chr1_1:48339475-48339494 Msa0025330:CDS 40.0%
GGATACTTCAAGCAAAGCAT+TGG - chr1_1:48339513-48339532 None:intergenic 40.0%
! ACGTGCTGATAAAGCCAAAT+TGG + chr1_1:48339538-48339557 Msa0025330:CDS 40.0%
! TCCAAAAGCCGATTCCAATT+TGG - chr1_1:48339555-48339574 None:intergenic 40.0%
AATCAGCAAGCTCAGTTGTT+AGG - chr1_1:48339655-48339674 None:intergenic 40.0%
TGAAAAATTGTCAGAGCTGG+TGG + chr1_1:48339709-48339728 Msa0025330:CDS 40.0%
CAGTCTCTCTTTCTCAGTAT+TGG - chr1_1:48339918-48339937 None:intergenic 40.0%
AAAGATGTCAAGCTTGGAGA+AGG + chr1_1:48340006-48340025 Msa0025330:CDS 40.0%
CAAGAACATCCCTTGAAGAA+AGG + chr1_1:48340059-48340078 Msa0025330:CDS 40.0%
CTGCATAAGCCTTTCTTCAA+GGG - chr1_1:48340071-48340090 None:intergenic 40.0%
ACTGCATAAGCCTTTCTTCA+AGG - chr1_1:48340072-48340091 None:intergenic 40.0%
TGAAGAAAGGCTTATGCAGT+TGG + chr1_1:48340072-48340091 Msa0025330:CDS 40.0%
! CCTGAAGCTTAGATTTTTCC+TGG - chr1_1:48340132-48340151 None:intergenic 40.0%
CCAGGAAAAATCTAAGCTTC+AGG + chr1_1:48340129-48340148 Msa0025330:CDS 40.0%
TAAGCTTCAGGAAAAAGCTC+AGG + chr1_1:48340141-48340160 Msa0025330:CDS 40.0%
GCCTTCTGATCATCATTAAC+AGG - chr1_1:48340235-48340254 None:intergenic 40.0%
! ATTTTGTGGCTTCAGTGTTG+CGG + chr1_1:48340522-48340541 Msa0025330:intron 40.0%
! TGTCTCACCTTTTTCTTCAC+AGG + chr1_1:48340601-48340620 Msa0025330:intron 40.0%
CTTTCCACCTGTGAAGAAAA+AGG - chr1_1:48340611-48340630 None:intergenic 40.0%
AGTTCAACTTAACAGGTCAG+AGG + chr1_1:48340745-48340764 Msa0025330:intron 40.0%
! CAAGCAGACCAAAAGCTTTT+AGG - chr1_1:48340799-48340818 None:intergenic 40.0%
AAGGTTAAGCCAATAGGCTA+TGG + chr1_1:48341067-48341086 Msa0025330:intron 40.0%
AGGTTAAGCCAATAGGCTAT+GGG + chr1_1:48341068-48341087 Msa0025330:intron 40.0%
CAAAATACCCCATAGCCTAT+TGG - chr1_1:48341079-48341098 None:intergenic 40.0%
TGCTTGCAGCTATTGTTATC+AGG + chr1_1:48341097-48341116 Msa0025330:intron 40.0%
AGAGCCTTAACAATGGAGTT+TGG + chr1_1:48341257-48341276 Msa0025330:intron 40.0%
GAGCCTTAACAATGGAGTTT+GGG + chr1_1:48341258-48341277 Msa0025330:intron 40.0%
GGTTCAGTTGATTGTTAGTG+AGG + chr1_1:48341412-48341431 Msa0025330:intron 40.0%
GACCTATAAATCAGGATTGC+AGG + chr1_1:48341623-48341642 Msa0025330:intron 40.0%
!! TCCTTGTGTTTTTATCCTGC+AGG + chr1_1:48341749-48341768 Msa0025330:intron 40.0%
ACCTGCAGGATAAAAACACA+AGG - chr1_1:48341753-48341772 None:intergenic 40.0%
GGAAGAGTTGAGAGATATTC+AGG + chr1_1:48341879-48341898 Msa0025330:CDS 40.0%
! CTGCATATTTAAGGCTCATG+TGG - chr1_1:48341915-48341934 None:intergenic 40.0%
CATGAGCCTTAAATATGCAG+AGG + chr1_1:48341915-48341934 Msa0025330:CDS 40.0%
ACTTGTAATGAAGCTCAAGG+TGG + chr1_1:48341957-48341976 Msa0025330:CDS 40.0%
TGCGAAATGGAAGTTGTCAG+TGG + chr1_1:48336120-48336139 Msa0025330:five_prime_UTR 45.0%
TGCATCTGAACTCGCATAGT+TGG - chr1_1:48336365-48336384 None:intergenic 45.0%
TCACCCTTCGATACAAACCT+GGG - chr1_1:48336720-48336739 None:intergenic 45.0%
ATCACCCTTCGATACAAACC+TGG - chr1_1:48336721-48336740 None:intergenic 45.0%
AGAGTCCATATCACCAACAG+AGG - chr1_1:48336929-48336948 None:intergenic 45.0%
TCCTGTCCATGCATGCATAT+TGG + chr1_1:48337036-48337055 Msa0025330:intron 45.0%
ACCAATATGCATGCATGGAC+AGG - chr1_1:48337040-48337059 None:intergenic 45.0%
!! AGGCTACAGGTGTTACTAAC+TGG - chr1_1:48337098-48337117 None:intergenic 45.0%
TATCAGCTTGCACATCTCCA+TGG + chr1_1:48337263-48337282 Msa0025330:intron 45.0%
ACACTATGTACCTTGGTTGC+AGG + chr1_1:48337333-48337352 Msa0025330:intron 45.0%
TTACAGCTATAACTCAGCCG+AGG + chr1_1:48337384-48337403 Msa0025330:CDS 45.0%
GGAGAAATTTCCCTTTCCTG+TGG - chr1_1:48337413-48337432 None:intergenic 45.0%
CTGTCCATCACTCATGTATG+TGG - chr1_1:48337434-48337453 None:intergenic 45.0%
TTGAATCTTGTCTTCCCGTC+CGG - chr1_1:48337459-48337478 None:intergenic 45.0%
ACGGGAAGACAAGATTCAAC+CGG + chr1_1:48337460-48337479 Msa0025330:CDS 45.0%
!! GGATACACTTTTCTGGGAAC+CGG - chr1_1:48337482-48337501 None:intergenic 45.0%
! CACCGGTGTCTTGCATATTT+TGG - chr1_1:48337564-48337583 None:intergenic 45.0%
AGACACAAGTGAAGAGCTAC+GGG + chr1_1:48337636-48337655 Msa0025330:CDS 45.0%
ATGAACGCCAGAAAGCTGTT+GGG + chr1_1:48337679-48337698 Msa0025330:CDS 45.0%
!! TGAGCTTGTTTCTGTTCTCC+AGG + chr1_1:48337993-48338012 Msa0025330:CDS 45.0%
!!! TCGAGAGCACTGAGTTTTGA+GGG - chr1_1:48338075-48338094 None:intergenic 45.0%
TATGGTGCAAGAACTGGAAG+AGG + chr1_1:48338182-48338201 Msa0025330:CDS 45.0%
TCTGTCCCAAAAACCTGCAA+TGG + chr1_1:48338345-48338364 Msa0025330:CDS 45.0%
! CTCCTCCATTGCAGGTTTTT+GGG - chr1_1:48338353-48338372 None:intergenic 45.0%
! TCTCCTCCATTGCAGGTTTT+TGG - chr1_1:48338354-48338373 None:intergenic 45.0%
! ACTTCAACTAGAGGAGCACA+TGG + chr1_1:48338881-48338900 Msa0025330:CDS 45.0%
AAGGCTCCAAGAGAAGATTG+CGG + chr1_1:48338968-48338987 Msa0025330:CDS 45.0%
AGAGCAGTATTGCTCCCTTA+TGG + chr1_1:48339196-48339215 Msa0025330:CDS 45.0%
TTCACTTGATTCCCTCAACC+TGG - chr1_1:48339225-48339244 None:intergenic 45.0%
! GGCTTTATCAGCACGTAATG+TGG - chr1_1:48339534-48339553 None:intergenic 45.0%
!! GCCAAATTGGAATCGGCTTT+TGG + chr1_1:48339551-48339570 Msa0025330:CDS 45.0%
AAAATTGTCAGAGCTGGTGG+AGG + chr1_1:48339712-48339731 Msa0025330:CDS 45.0%
TGGACGAAAGATGTCAAGCT+TGG + chr1_1:48340000-48340019 Msa0025330:CDS 45.0%
CCTATTGCTGCGAACTTGAT+TGG - chr1_1:48340361-48340380 None:intergenic 45.0%
CCAATCAAGTTCGCAGCAAT+AGG + chr1_1:48340358-48340377 Msa0025330:CDS 45.0%
AAGGGTCCTGTTGATCTTTC+AGG - chr1_1:48340416-48340435 None:intergenic 45.0%
AACAGGACCCTTATAACAGC+AGG + chr1_1:48340424-48340443 Msa0025330:CDS 45.0%
! CTTGGTAACCTTTGACAAGG+AGG - chr1_1:48340499-48340518 None:intergenic 45.0%
! CTCACCTTTTTCTTCACAGG+TGG + chr1_1:48340604-48340623 Msa0025330:intron 45.0%
GGTTAAGCCAATAGGCTATG+GGG + chr1_1:48341069-48341088 Msa0025330:intron 45.0%
!! AGACTGGTCTTGGACATTGA+GGG - chr1_1:48341318-48341337 None:intergenic 45.0%
!! TAGACTGGTCTTGGACATTG+AGG - chr1_1:48341319-48341338 None:intergenic 45.0%
TAGGGATATCAGAAGAGCTG+TGG + chr1_1:48341519-48341538 Msa0025330:intron 45.0%
TCGACGCCAACCTAAACTAA+AGG - chr1_1:48341605-48341624 None:intergenic 45.0%
!! TTGGCGTCGACCTATAAATC+AGG + chr1_1:48341615-48341634 Msa0025330:intron 45.0%
GGCCATTTGCATGGTTGTTT+CGG - chr1_1:48341789-48341808 None:intergenic 45.0%
GAGCCTTAAATATGCAGAGG+TGG + chr1_1:48341918-48341937 Msa0025330:CDS 45.0%
TTAGCAGGTACCAAAGGGGT+GGG + chr1_1:48336028-48336047 Msa0025330:five_prime_UTR 50.0%
AACAGTTTGTCCCACCCCTT+TGG - chr1_1:48336041-48336060 None:intergenic 50.0%
AGCAAAGTCACGGTGCGAAA+TGG + chr1_1:48336107-48336126 Msa0025330:five_prime_UTR 50.0%
! AAGATCTGGAATCCTGGGAG+AGG + chr1_1:48336324-48336343 Msa0025330:CDS 50.0%
AGACTTTCTGCCTGCAACCA+AGG - chr1_1:48337346-48337365 None:intergenic 50.0%
TTGCAGGCAGAAAGTCTTCC+TGG + chr1_1:48337349-48337368 Msa0025330:intron 50.0%
TCCCTTTCCTGTGGAATCCT+CGG - chr1_1:48337404-48337423 None:intergenic 50.0%
!! ACATGAGTGATGGACAGAGC+CGG + chr1_1:48337437-48337456 Msa0025330:CDS 50.0%
TACGGGCAGAAGCAAAGATG+TGG + chr1_1:48337653-48337672 Msa0025330:CDS 50.0%
ACGGGCAGAAGCAAAGATGT+GGG + chr1_1:48337654-48337673 Msa0025330:CDS 50.0%
GATGAACGCCAGAAAGCTGT+TGG + chr1_1:48337678-48337697 Msa0025330:CDS 50.0%
TGAACGCCAGAAAGCTGTTG+GGG + chr1_1:48337680-48337699 Msa0025330:CDS 50.0%
! TGTTTCTGTTCTCCAGGAGC+TGG + chr1_1:48337999-48338018 Msa0025330:CDS 50.0%
CTATGGTTTCTTCCAGCTCC+TGG - chr1_1:48338014-48338033 None:intergenic 50.0%
!!! CTCGAGAGCACTGAGTTTTG+AGG - chr1_1:48338076-48338095 None:intergenic 50.0%
GTCCCAAAAACCTGCAATGG+AGG + chr1_1:48338348-48338367 Msa0025330:CDS 50.0%
TTCAGAAGACATGCTCCCTG+AGG + chr1_1:48338629-48338648 Msa0025330:CDS 50.0%
CCTTGGCTTCCAACTCACTT+AGG - chr1_1:48338839-48338858 None:intergenic 50.0%
! CCTAAGTGAGTTGGAAGCCA+AGG + chr1_1:48338836-48338855 Msa0025330:CDS 50.0%
! TCAACTAGAGGAGCACATGG+AGG + chr1_1:48338884-48338903 Msa0025330:CDS 50.0%
GCATCTCCGCAATCTTCTCT+TGG - chr1_1:48338977-48338996 None:intergenic 50.0%
ATTGCTCCCTTATGGAAGCC+AGG + chr1_1:48339204-48339223 Msa0025330:CDS 50.0%
CCTCAACCTGGCTTCCATAA+GGG - chr1_1:48339213-48339232 None:intergenic 50.0%
! CCTTATGGAAGCCAGGTTGA+GGG + chr1_1:48339211-48339230 Msa0025330:CDS 50.0%
GGAGAAGGCTGCATCAGAAT+TGG + chr1_1:48340021-48340040 Msa0025330:CDS 50.0%
CAGCAGGAAACATCAGACTG+AGG + chr1_1:48340440-48340459 Msa0025330:CDS 50.0%
TCACAGGTGGAAAGTGAGCA+TGG + chr1_1:48340617-48340636 Msa0025330:intron 50.0%
CGACACAGTCGAAGTACACA+TGG + chr1_1:48341486-48341505 Msa0025330:intron 50.0%
TCCTGCAGGTCATCATCTCA+AGG + chr1_1:48341763-48341782 Msa0025330:intron 50.0%
GGCCGAAACAACCATGCAAA+TGG + chr1_1:48341784-48341803 Msa0025330:CDS 50.0%
GTTAGCAGGTACCAAAGGGG+TGG + chr1_1:48336027-48336046 Msa0025330:five_prime_UTR 55.0%
TACTAACTGTGGCCTCTCCC+AGG - chr1_1:48336339-48336358 None:intergenic 55.0%
AACTCAGCCGAGGATTCCAC+AGG + chr1_1:48337394-48337413 Msa0025330:CDS 55.0%
AGCCGAGGATTCCACAGGAA+AGG + chr1_1:48337399-48337418 Msa0025330:CDS 55.0%
GCCGAGGATTCCACAGGAAA+GGG + chr1_1:48337400-48337419 Msa0025330:CDS 55.0%
GAACGCCAGAAAGCTGTTGG+GGG + chr1_1:48337681-48337700 Msa0025330:CDS 55.0%
CAAGTCCCCCAACAGCTTTC+TGG - chr1_1:48337689-48337708 None:intergenic 55.0%
CAGAAAGCTGTTGGGGGACT+TGG + chr1_1:48337687-48337706 Msa0025330:CDS 55.0%
TGGGGGACTTGGAGATGTTG+AGG + chr1_1:48337698-48337717 Msa0025330:CDS 55.0%
GCTGGCTATGGTGCAAGAAC+TGG + chr1_1:48338176-48338195 Msa0025330:CDS 55.0%
! GCAAGAACTGGAAGAGGCGT+TGG + chr1_1:48338188-48338207 Msa0025330:CDS 55.0%
CACAGTCTCTCCTCCATTGC+AGG - chr1_1:48338361-48338380 None:intergenic 55.0%
TGCGGAGATGCAGTCTGAGA+TGG + chr1_1:48338986-48339005 Msa0025330:CDS 55.0%
CCCTTATGGAAGCCAGGTTG+AGG + chr1_1:48339210-48339229 Msa0025330:CDS 55.0%
CCCTCAACCTGGCTTCCATA+AGG - chr1_1:48339214-48339233 None:intergenic 55.0%
AAGAGACGCAAGATGTGCCC+AGG + chr1_1:48340111-48340130 Msa0025330:CDS 55.0%
GCCTTGAGATGATGACCTGC+AGG - chr1_1:48341767-48341786 None:intergenic 55.0%
!! GAGTGATGGACAGAGCCGGA+CGG + chr1_1:48337441-48337460 Msa0025330:CDS 60.0%
!! AGTGATGGACAGAGCCGGAC+GGG + chr1_1:48337442-48337461 Msa0025330:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48335952 48342257 48335952 ID=Msa0025330;Name=Msa0025330
chr1_1 mRNA 48335952 48342257 48335952 ID=Msa0025330-mRNA-1;Parent=Msa0025330;Name=Msa0025330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=278|1|1|1|1|1|8|249|1247
chr1_1 exon 48335952 48336232 48335952 ID=Msa0025330-mRNA-1:exon:13870;Parent=Msa0025330-mRNA-1
chr1_1 exon 48336316 48336438 48336316 ID=Msa0025330-mRNA-1:exon:13871;Parent=Msa0025330-mRNA-1
chr1_1 exon 48336684 48336721 48336684 ID=Msa0025330-mRNA-1:exon:13872;Parent=Msa0025330-mRNA-1
chr1_1 exon 48336804 48336978 48336804 ID=Msa0025330-mRNA-1:exon:13873;Parent=Msa0025330-mRNA-1
chr1_1 exon 48337355 48340261 48337355 ID=Msa0025330-mRNA-1:exon:13874;Parent=Msa0025330-mRNA-1
chr1_1 exon 48340339 48340461 48340339 ID=Msa0025330-mRNA-1:exon:13875;Parent=Msa0025330-mRNA-1
chr1_1 exon 48340623 48340759 48340623 ID=Msa0025330-mRNA-1:exon:13876;Parent=Msa0025330-mRNA-1
chr1_1 exon 48341771 48342257 48341771 ID=Msa0025330-mRNA-1:exon:13877;Parent=Msa0025330-mRNA-1
chr1_1 five_prime_UTR 48335952 48336229 48335952 ID=Msa0025330-mRNA-1:five_prime_utr;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48336230 48336232 48336230 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48336316 48336438 48336316 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48336684 48336721 48336684 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48336804 48336978 48336804 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48337355 48340261 48337355 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48340339 48340461 48340339 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48340623 48340759 48340623 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 CDS 48341771 48342008 48341771 ID=Msa0025330-mRNA-1:cds;Parent=Msa0025330-mRNA-1
chr1_1 three_prime_UTR 48342009 48342257 48342009 ID=Msa0025330-mRNA-1:three_prime_utr;Parent=Msa0025330-mRNA-1
Gene Sequence

>Msa0025330

ATGGGATCATTAAGATCTGGAATCCTGGGAGAGGCCACAGTTAGTATGACCAACTATGCGAGTTCAGATGCAGCTGTTCCACTTTCAATCCCGCTAAATAAGTGCAATCATGGGACAGTTTTGAATGTAACAGTGCAGTGCCTTACACCAAGAAAAAAACCCAGGGATCAAGAATCAAGGGAAACAAATTCTCATTTGAAGGCTATGACTATGAGTGAAAATAATCATGAAGTGACTGTCAAGTCAAATGGATCTGATTGTTCATATGTACAGAGTGTTGAATCTTCCTCTGTTGGTGATATGGACTCTACCTTATCACCTGAAGAAGTTGAGACTATGGCAGAAAGTCTTCCTGGTTCTGTATCAAATTACAGCTATAACTCAGCCGAGGATTCCACAGGAAAGGGAAATTTCTCCACATACATGAGTGATGGACAGAGCCGGACGGGAAGACAAGATTCAACCGGTTCCCAGAAAAGTGTATCCCATTACGACTACCCTGTTAATAATAACTCTTCTCAGTCGAATCGTTCATCATTTAATTCCCAAAATATGCAAGACACCGGTGCATCATCTTATAAGAAGACCAATGGTTCTAATAAAAGTCTTGAAGCTACAGAAGACACAAGTGAAGAGCTACGGGCAGAAGCAAAGATGTGGGAGATGAACGCCAGAAAGCTGTTGGGGGACTTGGAGATGTTGAGGACAGAATTCTCAGATCAATCCAAAAAGATGGAAGGTCTGGAAATGGACCTTTCAACAGCATATGTAGAATGTGATAGTTTGAAAAAAGAAGTTGAGCAGTTAACATTGTCATCAGGAGATCCAATAGTGAGACAAAAAACTTTGGAAGATTCAATATCTCAAGGTGAAAGTATTCCAGAAATTGAAAACGCTCTAAAAGATGAATTAAAGTTTCAGAAAGAATCCAATGCCAATTTGTCTTTGCAACTAAAGAAGAGCCAAGAAGCAAATGTTGAGCTTGTTTCTGTTCTCCAGGAGCTGGAAGAAACCATAGAACAGCAGAAACTTGAGATAGAAAACCTTTCATCATTACCCTCAAAACTCAGTGCTCTCGAGAAATCTTTCCAGACAAGTGAAGAAGGAAACATGATCTTAAGTCAACAAATAGAACAGTTGGAGGAATCAAAGAAAAATCTGCTGGCTATGGTGCAAGAACTGGAAGAGGCGTTGGAGAATAAAATGCAAGACATTGAACATGAAAAGATTCCAAACAGAAAATCAATTCAAGATATTGAAATGAAATATGAAAACAAATTATCTGCTAAAGAGGAAGAAATTTCAAGTTTGAAAGCAAGACTGTTAGAATCTGTCCCAAAAACCTGCAATGGAGGAGAGACTGTGTCAAGAAATGTAGGTGATGCAGATCTTTTGGAACAAATCGAAGTATTGAATAAGAAAGTTCAGGAACTTGAGATGGACTGTAATGAACTGACAAACGAAAACCTTGAGCTTTTATTCAAGCTGAAAGAAGCAAAGACCGATTCAAAAGATGGAGGTGCATCCAAAGATCTTTTGTCAAATATATACAAAGATCAATCATTTTCTAGCTCTGAGTCTGTAGCAAGCAACAATTTATTTAGAATATTTCATTCAGAAGACATGCTCCCTGAGGAAAATGCCAAGAAGATTAGTAATGATGGTCATATTTCAATTCGAGAGCTTGAGACATCTAAATCAGCACAAGAAGTCGGAATCACAGATCTGAATAATGAACTAACTGATGAAACATCTGAGATGGAAAACCTTGAGGTCAACTCATCAAGTAAAGAAAAGGAGATTGGGGTTCTGAAAAAGCTCCTAAGTGAGTTGGAAGCCAAGGTTTATCATCTTGAACAAGATAAACTTCAACTAGAGGAGCACATGGAGGACAAGACAAACGAACAAGAGTCTCAATTATCAGAACTAGAGAACGCAAAAAATCAATCTGCAAGGCTCCAAGAGAAGATTGCGGAGATGCAGTCTGAGATGGATTCTTCCATAGAAGATTTGGAACAAAAACTAAAGGAAACACAATTTCATTGGTCAGAAGCACAAGAAGAATGTGAATATCTCAGAGGAGAAAATCAGCAGTTACAAATTACCATTGAAAATCTTGAAGAAGAATGTGATTCATTTGAGAAGCTAAATGGATATTTGAGGCAGCAAAAGTTGGAGTTAGAGCAGTATTGCTCCCTTATGGAAGCCAGGTTGAGGGAATCAAGTGAAAGATTTGATGATTACTGTGAAAGAGTGGGACTCCTAGAAAAGAAGTTTGCTTTGATGCTGGAAGAGATTACATCAAAAGAGAAGAATTTAACTTCAGAGATGGATGGTATTTTGGATGAAAATAGGAATCATATAGTGAAGGGTCAAAGCTTATTGAATCAGATGCAAATGGAGAAGATTGTGGAAATTCAGAACCTTAAACTAGAAATAGAGAATCTCAGTCTGAAACTTTCAGCAGCCTATGATGAAAAGGAGAGAATAGCTTCCAATGCTTTGCTTGAAGTATCCACATTACGTGCTGATAAAGCCAAATTGGAATCGGCTTTTGGAGAAGTTCAATCTGAAGTGATTTTGTCGAAGAATGAGGTTAATGTGATGCAGACTGAATATAAACAGAAGTTGAAAGACCTAACAACTGAGCTTGCTGATTTCAAATTTAAAATGGAAATGCTGATGGCTGAACATGAAAAATTGTCAGAGCTGGTGGAGGACTACAAATCGAGAGAACTGAAATTCAAAAGCACTATGAATTCCCTTGAATCAAAACTTACAGACACTGAATACGAAAGACAACAATACATGGATGAATCCAGAAATTTGAAGGTTCAGTTGCAGCAGACTTGTCAATTTGAAAATGAGATTATGGCTCTCAAGAATGAGCTCAACACTTCCAATACTGAGAAAGAGAGACTGAAAGCCTCATTATGCTTGAAGTCTGAACTATGTGAAGATCTGAAGGCAGAGAATACATCATTTGGACGAAAGATGTCAAGCTTGGAGAAGGCTGCATCAGAATTGGAGCACTGCAAGAGAACAAGAACATCCCTTGAAGAAAGGCTTATGCAGTTGGAAAATGACTTGAATGCAAGAGACGCAAGATGTGCCCAGGAAAAATCTAAGCTTCAGGAAAAAGCTCAGGCCCTTGAAGAAGAATTGAAACTGATTAAGGAACAAAAGCGAAATCAAGTTTCAAAGCTAAACAGGAAACCTGTTAATGATGATCAGAAGGCCTCAAAAAATTCTATTATTAAGAATACCAATCAAGTTCGCAGCAATAGGAAAAAGCCATCTTTAAAGAATGACAGAGAAATCCTGAAAGATCAACAGGACCCTTATAACAGCAGGAAACATCAGACTGAGGTGGAAAGTGAGCATGGACTTCTTGATGAAAATGTTCATATAGTTGAAGTAGAACCTGTATCAAAGACTCAATTGCTTGAGACTGCAGTAGAAAAAGCAAAAGAAGCCATTGACATATATGAAGTTCAACTTAACAGGTCATCATCTCAAGGCCGAAACAACCATGCAAATGGCCTAGTAAAATCAATGGCTGAAGAAGAACTAGTGACAAAAGAAAAGTTTGAACGTACAAAATCAATGCTAGAGGAAGAGTTGAGAGATATTCAGGATCGTTACTTCCACATGAGCCTTAAATATGCAGAGGTGGAATCTCAGCGTGAAGAACTTGTAATGAAGCTCAAGGTGGCTAAAAGCAAAAAAGGATGGCTCTCATAG
Protein sequence

>Msa0025330

MGSLRSGILGEATVSMTNYASSDAAVPLSIPLNKCNHGTVLNVTVQCLTPRKKPRDQESRETNSHLKAMTMSENNHEVTVKSNGSDCSYVQSVESSSVGDMDSTLSPEEVETMAESLPGSVSNYSYNSAEDSTGKGNFSTYMSDGQSRTGRQDSTGSQKSVSHYDYPVNNNSSQSNRSSFNSQNMQDTGASSYKKTNGSNKSLEATEDTSEELRAEAKMWEMNARKLLGDLEMLRTEFSDQSKKMEGLEMDLSTAYVECDSLKKEVEQLTLSSGDPIVRQKTLEDSISQGESIPEIENALKDELKFQKESNANLSLQLKKSQEANVELVSVLQELEETIEQQKLEIENLSSLPSKLSALEKSFQTSEEGNMILSQQIEQLEESKKNLLAMVQELEEALENKMQDIEHEKIPNRKSIQDIEMKYENKLSAKEEEISSLKARLLESVPKTCNGGETVSRNVGDADLLEQIEVLNKKVQELEMDCNELTNENLELLFKLKEAKTDSKDGGASKDLLSNIYKDQSFSSSESVASNNLFRIFHSEDMLPEENAKKISNDGHISIRELETSKSAQEVGITDLNNELTDETSEMENLEVNSSSKEKEIGVLKKLLSELEAKVYHLEQDKLQLEEHMEDKTNEQESQLSELENAKNQSARLQEKIAEMQSEMDSSIEDLEQKLKETQFHWSEAQEECEYLRGENQQLQITIENLEEECDSFEKLNGYLRQQKLELEQYCSLMEARLRESSERFDDYCERVGLLEKKFALMLEEITSKEKNLTSEMDGILDENRNHIVKGQSLLNQMQMEKIVEIQNLKLEIENLSLKLSAAYDEKERIASNALLEVSTLRADKAKLESAFGEVQSEVILSKNEVNVMQTEYKQKLKDLTTELADFKFKMEMLMAEHEKLSELVEDYKSRELKFKSTMNSLESKLTDTEYERQQYMDESRNLKVQLQQTCQFENEIMALKNELNTSNTEKERLKASLCLKSELCEDLKAENTSFGRKMSSLEKAASELEHCKRTRTSLEERLMQLENDLNARDARCAQEKSKLQEKAQALEEELKLIKEQKRNQVSKLNRKPVNDDQKASKNSIIKNTNQVRSNRKKPSLKNDREILKDQQDPYNSRKHQTEVESEHGLLDENVHIVEVEPVSKTQLLETAVEKAKEAIDIYEVQLNRSSSQGRNNHANGLVKSMAEEELVTKEKFERTKSMLEEELRDIQDRYFHMSLKYAEVESQREELVMKLKVAKSKKGWLS*