AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0169310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169310 MtrunA17_Chr1g0186011 94.922 512 16 1 1 502 1 512 0.0 981
Msa0169310 MtrunA17_Chr2g0286181 45.109 184 91 3 298 478 302 478 1.12e-37 146
Msa0169310 MtrunA17_Chr1g0155741 39.827 231 117 5 240 462 202 418 6.45e-32 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169310 AT1G07615.1 53.516 512 192 7 9 502 10 493 6.01e-163 471
Msa0169310 AT5G18570.1 44.022 184 93 3 298 478 362 538 1.76e-36 143

Find 141 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTACCCTTAGGCCGAATTT+AGG 0.211294 1_4:-52524659 Msa0169310:CDS
CTTTGCTGTGAGTGCTGTTT+TGG 0.221466 1_4:-52524306 Msa0169310:CDS
GTCTAAGCTTGCCCCTTTGC+AGG 0.266746 1_4:-52526549 Msa0169310:intron
TGATATTCCTGGACTTATAA+AGG 0.274187 1_4:-52524600 Msa0169310:CDS
ACAAAGATTGTTTGTTGTTT+TGG 0.279384 1_4:+52527158 None:intergenic
TGGAATGCTCTCGTAGAGTT+TGG 0.302804 1_4:-52525654 Msa0169310:CDS
AGACGTGGCTGCTGCTTTAC+CGG 0.311080 1_4:-52524501 Msa0169310:CDS
CTACCCTTAGGCCGAATTTA+GGG 0.313913 1_4:-52524658 Msa0169310:CDS
TTAAACGTAGCACATCTAAA+TGG 0.315270 1_4:+52524026 None:intergenic
GGTAGGTGGTGATGTAATTC+TGG 0.326577 1_4:-52525674 Msa0169310:CDS
TTAGACCCTTGGGATGTTCC+TGG 0.330001 1_4:-52525250 Msa0169310:CDS
CATGTCCAAGTCCACGATTT+TGG 0.354076 1_4:+52524570 None:intergenic
TTGTTTACTTCCCCTGTACT+TGG 0.357043 1_4:-52524117 Msa0169310:three_prime_UTR
GGAATGCTCTCGTAGAGTTT+GGG 0.359105 1_4:-52525653 Msa0169310:CDS
CACATCTAAATGGTTTGATT+AGG 0.361830 1_4:+52524036 None:intergenic
TATATCCTCTGAACCAAGTT+CGG 0.363030 1_4:+52525030 None:intergenic
CATAGAACGCACGAAGGTTC+TGG 0.366062 1_4:-52524534 Msa0169310:CDS
AACATTTGCTTCAGTAGCTT+GGG 0.369905 1_4:+52525126 None:intergenic
TAGTTCAAATTCCCTAAATT+CGG 0.374007 1_4:+52524647 None:intergenic
CTCACGAATGTGTGAAGGAT+TGG 0.377200 1_4:+52527060 None:intergenic
TCACGAATGTGTGAAGGATT+GGG 0.377372 1_4:+52527061 None:intergenic
ATAATTGTGGCTGATATTCC+TGG 0.394031 1_4:-52524611 Msa0169310:CDS
CAACATTTGCTTCAGTAGCT+TGG 0.398231 1_4:+52525125 None:intergenic
GCTGGTAAAAGCACTTTACT+TGG 0.404940 1_4:-52524725 Msa0169310:CDS
GGTGGCAGTGGTGGGGTAGG+TGG 0.417686 1_4:-52525688 Msa0169310:CDS
ATATCCTCTGAACCAAGTTC+GGG 0.422031 1_4:+52525031 None:intergenic
AGGAACCAGGGGTGCTGATA+AGG 0.429683 1_4:-52525477 Msa0169310:intron
GCAACATTACTAAGGATCTC+TGG 0.430664 1_4:+52524998 None:intergenic
AATTCCCTAAATTCGGCCTA+AGG 0.438327 1_4:+52524654 None:intergenic
AATCATGCGATATTTGATCT+AGG 0.444427 1_4:+52524213 None:intergenic
GTTAACTCTTCCTTAAGTAC+AGG 0.447102 1_4:-52524824 Msa0169310:CDS
CCTCGGCAGATTTAGACCCT+TGG 0.450051 1_4:-52525261 Msa0169310:CDS
TCTAATGAAACTCCCGAACT+TGG 0.450853 1_4:-52525043 Msa0169310:CDS
TCAACACGTAACCAATGTTC+AGG 0.450928 1_4:-52524858 Msa0169310:CDS
ACCAGGTAAACCTGTACTTA+AGG 0.451987 1_4:+52524814 None:intergenic
AATCTTATTTGCGACTATCA+AGG 0.455534 1_4:+52524391 None:intergenic
CTCGGCAGATTTAGACCCTT+GGG 0.455712 1_4:-52525260 Msa0169310:CDS
AAGCCTCCGACTACGAAGGC+AGG 0.456383 1_4:-52524887 Msa0169310:CDS
ACAGCACTCACAGCAAAGAT+AGG 0.456403 1_4:+52524311 None:intergenic
GTGAAGGATTGGGGTCGAAT+TGG 0.460916 1_4:+52527071 None:intergenic
GATATTCCTGGACTTATAAA+GGG 0.465243 1_4:-52524599 Msa0169310:CDS
TTAATTCAGCAACATTACTA+AGG 0.467623 1_4:+52524990 None:intergenic
GTTAAGATATTTGCAAAAGC+AGG 0.467802 1_4:-52526395 Msa0169310:CDS
ATCTGGAGGGTTTATCCAAT+CGG 0.468500 1_4:-52524418 Msa0169310:CDS
TTTAATGTAGGTGGCAGTGG+TGG 0.468806 1_4:-52525697 Msa0169310:intron
AGAGTTAAAGAGAAGAGTCC+AGG 0.470720 1_4:-52524339 Msa0169310:CDS
TTAATGTAGGTGGCAGTGGT+GGG 0.470839 1_4:-52525696 Msa0169310:intron
ACTGTACTTCATCTTGTTAG+TGG 0.471105 1_4:-52525316 Msa0169310:CDS
ATGTCGACTGCGGCGAGAGC+TGG 0.471508 1_4:+52526352 None:intergenic
TTCGTAGTCGGAGGCTTCCT+AGG 0.478808 1_4:+52524893 None:intergenic
GTCAATGCAATACATCCTAC+TGG 0.486779 1_4:-52525160 Msa0169310:CDS
TCCTTAAGTACAGGTTTACC+TGG 0.491918 1_4:-52524815 Msa0169310:CDS
TCTAGAGCTTGAGTACCATC+TGG 0.493988 1_4:-52524435 Msa0169310:CDS
GCTGCTTTACCGGGAAGAAA+AGG 0.495442 1_4:-52524491 Msa0169310:CDS
GCACACCAAAATCGTGGACT+TGG 0.496498 1_4:-52524575 Msa0169310:CDS
GTAGGTGGCAGTGGTGGGGT+AGG 0.497438 1_4:-52525691 Msa0169310:intron
TTGGAGTTGAGTGTGTTGCT+TGG 0.504348 1_4:-52524098 Msa0169310:three_prime_UTR
TACTTCCAACGTTACAAAGC+AGG 0.504969 1_4:-52525188 Msa0169310:CDS
TTGTTTAATGTAGGTGGCAG+TGG 0.505030 1_4:-52525700 Msa0169310:intron
CCTACCCCTGCCTTCGTAGT+CGG 0.510088 1_4:+52524881 None:intergenic
GTTGCTGAATTAACAGAAGA+AGG 0.511848 1_4:-52524980 Msa0169310:CDS
CACGAAGGTTCTGGCTTATG+TGG 0.512150 1_4:-52524525 Msa0169310:CDS
GATTGATGAGGAAGGTGCTG+AGG 0.515849 1_4:-52524372 Msa0169310:CDS
CTAAGACCAGCTTTAAGCTC+TGG 0.516203 1_4:+52524272 None:intergenic
ACACACTCAACTCCAAGTAC+AGG 0.520460 1_4:+52524105 None:intergenic
GATATTTGATCTAGGTAAAG+TGG 0.520840 1_4:+52524221 None:intergenic
TGTGCACCCTTTATAAGTCC+AGG 0.526218 1_4:+52524593 None:intergenic
ATTGTTGCTCGTGGAGGAGA+AGG 0.529077 1_4:-52524947 Msa0169310:CDS
CGTGGAGGAGAAGGTGGTCT+CGG 0.529675 1_4:-52524938 Msa0169310:CDS
GCATGGTAGATAGCAGGTAA+TGG 0.541441 1_4:-52525527 Msa0169310:intron
CAACAGATTATTGTTGCTCG+TGG 0.544802 1_4:-52524956 Msa0169310:CDS
ATTGGAGATGAACCTGCAAA+GGG 0.544998 1_4:+52526537 None:intergenic
AATAACCTTATCAGCACCCC+TGG 0.546348 1_4:+52525472 None:intergenic
CTCGAACTTGTGTATCGAGA+TGG 0.547124 1_4:-52526616 Msa0169310:CDS
CACACTCAACTCCAAGTACA+GGG 0.547752 1_4:+52524106 None:intergenic
GGTCTTAGAGTGCTTGTCAA+TGG 0.548551 1_4:-52524257 Msa0169310:CDS
TAATGTAGGTGGCAGTGGTG+GGG 0.549379 1_4:-52525695 Msa0169310:intron
GACGTGGCTGCTGCTTTACC+GGG 0.552200 1_4:-52524500 Msa0169310:CDS
CGTAGAGTTTGGGATTTCAG+TGG 0.552303 1_4:-52525643 Msa0169310:CDS
TAGGTTGTTCGTGTACCGAT+TGG 0.553618 1_4:-52525340 Msa0169310:CDS
ATTCCCTAAATTCGGCCTAA+GGG 0.555377 1_4:+52524655 None:intergenic
AGGATTGGGGTCGAATTGGT+TGG 0.557475 1_4:+52527075 None:intergenic
GATTGGAGATGAACCTGCAA+AGG 0.558258 1_4:+52526536 None:intergenic
AGTAGAACCATCGCGAGGGT+CGG 0.558484 1_4:+52525207 None:intergenic
AACGGTGCATGGTAGATAGC+AGG 0.561820 1_4:-52525533 Msa0169310:intron
AAGGCATAGTGACCAACAGC+AGG 0.566091 1_4:+52524683 None:intergenic
GGGATACCAGAGCTTAAAGC+TGG 0.567066 1_4:-52524278 Msa0169310:CDS
AGATGAAGTACAGTGCCAAT+CGG 0.571977 1_4:+52525325 None:intergenic
CACGAATGTGTGAAGGATTG+GGG 0.572990 1_4:+52527062 None:intergenic
TCGAGAGCTAAGCCTGCTGT+TGG 0.575285 1_4:-52524695 Msa0169310:CDS
GAGTTAAAGAGAAGAGTCCA+GGG 0.575569 1_4:-52524338 Msa0169310:CDS
GACTATCAAGGATGGCCGAT+TGG 0.580706 1_4:+52524403 None:intergenic
AGCCTCCGACTACGAAGGCA+GGG 0.582496 1_4:-52524886 Msa0169310:CDS
AAGTCTTTCAGTTGTTCCCA+CGG 0.582651 1_4:+52524461 None:intergenic
CAGATTATTGTTGCTCGTGG+AGG 0.584571 1_4:-52524953 Msa0169310:CDS
GAACCTTCGTGCGTTCTATG+TGG 0.589370 1_4:+52524537 None:intergenic
TAAGTATGAGCAAGATAGAG+TGG 0.592098 1_4:-52524164 Msa0169310:three_prime_UTR
ACTGTCAGTGTCCTGAACAT+TGG 0.594372 1_4:+52524847 None:intergenic
ATAGCAGGTAATGGAGGACA+TGG 0.597504 1_4:-52525518 Msa0169310:CDS
GATCATTCCGACCCTCGCGA+TGG 0.602902 1_4:-52525214 Msa0169310:CDS
ATTCGGCCTAAGGGTAGTGA+AGG 0.603401 1_4:+52524664 None:intergenic
AGAGCTTGAGTACCATCTGG+AGG 0.604807 1_4:-52524432 Msa0169310:CDS
TTATTTGCGACTATCAAGGA+TGG 0.608281 1_4:+52524395 None:intergenic
ATAAGAACAGTTTCAGAACC+AGG 0.610177 1_4:+52524797 None:intergenic
AAAGCAGGAGATGGTGGTAA+CGG 0.611800 1_4:-52526380 Msa0169310:CDS
ACCCCTGCCTTCGTAGTCGG+AGG 0.611843 1_4:+52524884 None:intergenic
ATATTTGATCTAGGTAAAGT+GGG 0.612494 1_4:+52524222 None:intergenic
TTTGTGGGAATGCCTAATGC+TGG 0.612770 1_4:-52524743 Msa0169310:CDS
GAAAACTCACGAATGTGTGA+AGG 0.614531 1_4:+52527055 None:intergenic
GCAAATAAGATTGATGAGGA+AGG 0.615672 1_4:-52524380 Msa0169310:CDS
GTTGCTCGTGGAGGAGAAGG+TGG 0.615939 1_4:-52524944 Msa0169310:CDS
AACTCCCGAACTTGGTTCAG+AGG 0.616094 1_4:-52525035 Msa0169310:CDS
CCGACTACGAAGGCAGGGGT+AGG 0.616125 1_4:-52524881 Msa0169310:CDS
AGTACACCAGGAACATCCCA+AGG 0.617161 1_4:+52525244 None:intergenic
ATATTTGCAAAAGCAGGAGA+TGG 0.618455 1_4:-52526389 Msa0169310:CDS
TTTGCAAAAGCAGGAGATGG+TGG 0.621662 1_4:-52526386 Msa0169310:CDS
GAGCTTGAGTACCATCTGGA+GGG 0.622668 1_4:-52524431 Msa0169310:CDS
ACTATGCCTTCACTACCCTT+AGG 0.622794 1_4:-52524670 Msa0169310:CDS
TGGTAGATAGCAGGTAATGG+AGG 0.626963 1_4:-52525524 Msa0169310:intron
TGATGATATGTCGATAATTG+TGG 0.627592 1_4:-52524624 Msa0169310:CDS
GTGGGAACAACTGAAAGACT+TGG 0.628785 1_4:-52524459 Msa0169310:CDS
ATCTTGCTCATACTTACAAG+AGG 0.629556 1_4:+52524171 None:intergenic
TGGGATGAAGAGCAGCCAGT+AGG 0.630566 1_4:+52525145 None:intergenic
GCCTCCGACTACGAAGGCAG+GGG 0.633957 1_4:-52524885 Msa0169310:CDS
TGATCATCTACAAGTACACC+AGG 0.639058 1_4:+52525232 None:intergenic
CCAAGGGTCTAAATCTGCCG+AGG 0.648440 1_4:+52525261 None:intergenic
TAGGAAGCCTCCGACTACGA+AGG 0.650216 1_4:-52524891 Msa0169310:CDS
CAGCAAAGATAGGAACACCC+TGG 0.655094 1_4:+52524321 None:intergenic
AGTCGCAAATAAGATTGATG+AGG 0.657149 1_4:-52524384 Msa0169310:CDS
AAGGGTGCACACCAAAATCG+TGG 0.658610 1_4:-52524581 Msa0169310:CDS
AAGAAAAGGAATTTCACCGT+GGG 0.658650 1_4:-52524477 Msa0169310:CDS
GATTGGATAAACCCTCCAGA+TGG 0.671658 1_4:+52524420 None:intergenic
TGGAAGTAGAACCATCGCGA+GGG 0.675258 1_4:+52525203 None:intergenic
TTGGAAGTAGAACCATCGCG+AGG 0.677202 1_4:+52525202 None:intergenic
TCTGGCTTATGTGGTAGACG+TGG 0.716654 1_4:-52524516 Msa0169310:CDS
TTGGAGATGAACCTGCAAAG+GGG 0.725714 1_4:+52526538 None:intergenic
GTACACCAGGAACATCCCAA+GGG 0.738023 1_4:+52525245 None:intergenic
ACACTCAACTCCAAGTACAG+GGG 0.739351 1_4:+52524107 None:intergenic
GCAAGCTTAGACTTGCTGTG+AGG 0.740111 1_4:+52526560 None:intergenic
GAAGAAAAGGAATTTCACCG+TGG 0.751479 1_4:-52524478 Msa0169310:CDS
GCGCCACATAGAACGCACGA+AGG 0.760320 1_4:-52524540 Msa0169310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTTATTTTTTAAGAATT+TGG - chr1_4:52524106-52524125 Msa0169310:three_prime_UTR 10.0%
!!! ATATTTTGAATAGTTAATTT+TGG + chr1_4:52524314-52524333 None:intergenic 10.0%
!!! AAAAAAGAAACTTTATTTAT+AGG + chr1_4:52524409-52524428 None:intergenic 10.0%
!!! TTTTTTGACATAATTTTTTT+TGG + chr1_4:52525634-52525653 None:intergenic 10.0%
!!! TATTTTTATTTTCTTCTATT+TGG - chr1_4:52525804-52525823 Msa0169310:intron 10.0%
!!! ATTTTTTAAGAATTTGGTTT+CGG - chr1_4:52524112-52524131 Msa0169310:three_prime_UTR 15.0%
!! AACAAACAAAATATAAGAAA+TGG + chr1_4:52524224-52524243 None:intergenic 15.0%
!! TATTTGTTTAAGAGAAAAAA+TGG + chr1_4:52524287-52524306 None:intergenic 15.0%
!!! TTTTGAATTATTGAAAATGT+GGG + chr1_4:52525143-52525162 None:intergenic 15.0%
!!! ATTTTGAATTGTTAGTAATT+TGG - chr1_4:52525354-52525373 Msa0169310:intron 15.0%
!! ATAATTAAATCCGTATATAT+AGG + chr1_4:52525399-52525418 None:intergenic 15.0%
!!! AAATACGAAACAATTTTTAA+AGG + chr1_4:52525789-52525808 None:intergenic 15.0%
!! TATTTATAGGATTTCTCATT+GGG + chr1_4:52524396-52524415 None:intergenic 20.0%
!! TTATTTATAGGATTTCTCAT+TGG + chr1_4:52524397-52524416 None:intergenic 20.0%
!! TTAATATTTACTCATTTGTC+CGG + chr1_4:52525008-52525027 None:intergenic 20.0%
!! AATTGAGTAAATAACCAATT+TGG - chr1_4:52525083-52525102 Msa0169310:CDS 20.0%
!! TATAATTTCAAAGACCAAAT+TGG + chr1_4:52525100-52525119 None:intergenic 20.0%
!!! AATTTGGTCTTTGAAATTAT+AGG - chr1_4:52525099-52525118 Msa0169310:CDS 20.0%
!!! GTTTTGAATTATTGAAAATG+TGG + chr1_4:52525144-52525163 None:intergenic 20.0%
!! TATATTGAAAAATGTCAGTA+AGG - chr1_4:52525170-52525189 Msa0169310:CDS 20.0%
!!! TAATGATAATGACATTAAGT+TGG - chr1_4:52525224-52525243 Msa0169310:CDS 20.0%
!!! TTTGATAATAATCTATGCAT+AGG - chr1_4:52525295-52525314 Msa0169310:CDS 20.0%
!!! TTGATAATAATCTATGCATA+GGG - chr1_4:52525296-52525315 Msa0169310:CDS 20.0%
!!! TATTAACATTTTGCAATTTC+AGG - chr1_4:52525327-52525346 Msa0169310:CDS 20.0%
!! TTGATGTTAAGAAATTTAGA+TGG - chr1_4:52525465-52525484 Msa0169310:intron 20.0%
!!! TGAACTTTTTTTACTATAGA+AGG + chr1_4:52525932-52525951 None:intergenic 20.0%
!!! ACAAAGATTGTTTGTTGTTT+TGG + chr1_4:52524060-52524079 None:intergenic 25.0%
!! TATGCATAGCCAAATTTTAA+GGG + chr1_4:52524353-52524372 None:intergenic 25.0%
!! TTATGCATAGCCAAATTTTA+AGG + chr1_4:52524354-52524373 None:intergenic 25.0%
! ATTTATAGGATTTCTCATTG+GGG + chr1_4:52524395-52524414 None:intergenic 25.0%
!!! CAAAATGTCGTTTTTTTTCA+TGG + chr1_4:52524722-52524741 None:intergenic 25.0%
! TAATATTTACTCATTTGTCC+GGG + chr1_4:52525007-52525026 None:intergenic 25.0%
! CTATTGTAAACATTAATGAG+GGG + chr1_4:52525201-52525220 None:intergenic 25.0%
! GCTATTGTAAACATTAATGA+GGG + chr1_4:52525202-52525221 None:intergenic 25.0%
! AGCTATTGTAAACATTAATG+AGG + chr1_4:52525203-52525222 None:intergenic 25.0%
!!! TGACATTAAGTTGGAAATAT+CGG - chr1_4:52525233-52525252 Msa0169310:CDS 25.0%
!! GGAATGAATTTAAAGTTAAG+TGG - chr1_4:52525255-52525274 Msa0169310:CDS 25.0%
! AAAGTTAAGTGGATAGTATA+AGG - chr1_4:52525266-52525285 Msa0169310:CDS 25.0%
! AAGTTAAGTGGATAGTATAA+GGG - chr1_4:52525267-52525286 Msa0169310:CDS 25.0%
! TTGAATTGTTAGTAATTTGG+AGG - chr1_4:52525357-52525376 Msa0169310:intron 25.0%
! TCGATACAAACCTATATATA+CGG - chr1_4:52525386-52525405 Msa0169310:intron 25.0%
! CTAAATTTCTTAACATCAAC+TGG + chr1_4:52525464-52525483 None:intergenic 25.0%
! GGATCATCAAAAAATAAGAT+AGG - chr1_4:52525718-52525737 Msa0169310:intron 25.0%
! AAAAAATAAGATAGGAACCA+GGG - chr1_4:52525726-52525745 Msa0169310:intron 25.0%
! AGTAAAAAAAGTTCAATCCT+CGG - chr1_4:52525937-52525956 Msa0169310:intron 25.0%
! TTAATTCAGCAACATTACTA+AGG + chr1_4:52526228-52526247 None:intergenic 25.0%
! TAGTTCAAATTCCCTAAATT+CGG + chr1_4:52526571-52526590 None:intergenic 25.0%
! ATATTTGATCTAGGTAAAGT+GGG + chr1_4:52526996-52527015 None:intergenic 25.0%
!! TTTTAAGAATTTGGTTTCGG+CGG - chr1_4:52524115-52524134 Msa0169310:three_prime_UTR 30.0%
TAAAAAAATGCTAGCAGAGA+AGG + chr1_4:52524197-52524216 None:intergenic 30.0%
AACGCAAAACCCTTAAAATT+TGG - chr1_4:52524341-52524360 Msa0169310:CDS 30.0%
! CTTTGTTCAGTTCATTTTGA+AGG - chr1_4:52524472-52524491 Msa0169310:CDS 30.0%
ACAAACACAGACAAAAATGT+TGG - chr1_4:52524537-52524556 Msa0169310:CDS 30.0%
!!! AATGTCGTTTTTTTTCATGG+TGG + chr1_4:52524719-52524738 None:intergenic 30.0%
GTTAAGATATTTGCAAAAGC+AGG - chr1_4:52524820-52524839 Msa0169310:CDS 30.0%
TTCTTCTAGATTTGACAATG+CGG - chr1_4:52524918-52524937 Msa0169310:CDS 30.0%
!! GACATTAAGTTGGAAATATC+GGG - chr1_4:52525234-52525253 Msa0169310:CDS 30.0%
ACAATGTGCTTGTTTAATGT+AGG - chr1_4:52525506-52525525 Msa0169310:CDS 30.0%
CAAAAAATAAGATAGGAACC+AGG - chr1_4:52525725-52525744 Msa0169310:intron 30.0%
AAAAATAAGATAGGAACCAG+GGG - chr1_4:52525727-52525746 Msa0169310:intron 30.0%
! AAAGCAAGTTAGTTTGGATA+AGG + chr1_4:52525853-52525872 None:intergenic 30.0%
CCTATTAAAGCAAGTTAGTT+TGG + chr1_4:52525859-52525878 None:intergenic 30.0%
!! CCAAACTAACTTGCTTTAAT+AGG - chr1_4:52525856-52525875 Msa0169310:intron 30.0%
TGTCTATTCAAAAAGATCCT+AGG - chr1_4:52526305-52526324 Msa0169310:intron 30.0%
!!! ATTGCTGATGTTAGTTTTGT+GGG - chr1_4:52526457-52526476 Msa0169310:intron 30.0%
TGATGATATGTCGATAATTG+TGG - chr1_4:52526591-52526610 Msa0169310:CDS 30.0%
TGATATTCCTGGACTTATAA+AGG - chr1_4:52526615-52526634 Msa0169310:CDS 30.0%
GATATTCCTGGACTTATAAA+GGG - chr1_4:52526616-52526635 Msa0169310:CDS 30.0%
! AATCTTATTTGCGACTATCA+AGG + chr1_4:52526827-52526846 None:intergenic 30.0%
GATATTTGATCTAGGTAAAG+TGG + chr1_4:52526997-52527016 None:intergenic 30.0%
AATCATGCGATATTTGATCT+AGG + chr1_4:52527005-52527024 None:intergenic 30.0%
!! AGGTTATGACCATTGTTTTT+GGG + chr1_4:52527162-52527181 None:intergenic 30.0%
! TAGGTTATGACCATTGTTTT+TGG + chr1_4:52527163-52527182 None:intergenic 30.0%
CACATCTAAATGGTTTGATT+AGG + chr1_4:52527182-52527201 None:intergenic 30.0%
TTAAACGTAGCACATCTAAA+TGG + chr1_4:52527192-52527211 None:intergenic 30.0%
! TGGTAGAAAATGAGTTGGAT+TGG + chr1_4:52524699-52524718 None:intergenic 35.0%
TGTAATTACTCACTGCATTG+AGG - chr1_4:52524763-52524782 Msa0169310:CDS 35.0%
!! GCATTGAGGTTTTTGTTTGT+AGG - chr1_4:52524777-52524796 Msa0169310:CDS 35.0%
ATATTTGCAAAAGCAGGAGA+TGG - chr1_4:52524826-52524845 Msa0169310:CDS 35.0%
TCTTCTAGATTTGACAATGC+GGG - chr1_4:52524919-52524938 Msa0169310:CDS 35.0%
TGAGCTAAGGGATAAAAAGT+TGG - chr1_4:52524965-52524984 Msa0169310:CDS 35.0%
GATAAAAAGTTGGAGGTCTT+GGG - chr1_4:52524975-52524994 Msa0169310:CDS 35.0%
TCTTAACATCAACTGGATGA+TGG + chr1_4:52525457-52525476 None:intergenic 35.0%
ATGTGCTTGTTTAATGTAGG+TGG - chr1_4:52525509-52525528 Msa0169310:CDS 35.0%
TTTCATGTCAGTGACACTAA+CGG - chr1_4:52525664-52525683 Msa0169310:CDS 35.0%
ACTGTACTTCATCTTGTTAG+TGG - chr1_4:52525899-52525918 Msa0169310:intron 35.0%
! TTTTTCCTGCTTTGTAACGT+TGG + chr1_4:52526035-52526054 None:intergenic 35.0%
AACATTTGCTTCAGTAGCTT+GGG + chr1_4:52526092-52526111 None:intergenic 35.0%
TATATCCTCTGAACCAAGTT+CGG + chr1_4:52526188-52526207 None:intergenic 35.0%
GTTGCTGAATTAACAGAAGA+AGG - chr1_4:52526235-52526254 Msa0169310:intron 35.0%
GTTAACTCTTCCTTAAGTAC+AGG - chr1_4:52526391-52526410 Msa0169310:CDS 35.0%
ATAAGAACAGTTTCAGAACC+AGG + chr1_4:52526421-52526440 None:intergenic 35.0%
!!! CATTGCTGATGTTAGTTTTG+TGG - chr1_4:52526456-52526475 Msa0169310:intron 35.0%
!! AAAGTGCTTTTACCAGCATT+AGG + chr1_4:52526487-52526506 None:intergenic 35.0%
ATAATTGTGGCTGATATTCC+TGG - chr1_4:52526604-52526623 Msa0169310:CDS 35.0%
AAGAAAAGGAATTTCACCGT+GGG - chr1_4:52526738-52526757 Msa0169310:intron 35.0%
TTATTTGCGACTATCAAGGA+TGG + chr1_4:52526823-52526842 None:intergenic 35.0%
AGTCGCAAATAAGATTGATG+AGG - chr1_4:52526831-52526850 Msa0169310:intron 35.0%
GCAAATAAGATTGATGAGGA+AGG - chr1_4:52526835-52526854 Msa0169310:intron 35.0%
ATCTTGCTCATACTTACAAG+AGG + chr1_4:52527047-52527066 None:intergenic 35.0%
TAAGTATGAGCAAGATAGAG+TGG - chr1_4:52527051-52527070 Msa0169310:intron 35.0%
!!! TTGTTTTTGGGAGTTCAGTT+TGG + chr1_4:52527150-52527169 None:intergenic 35.0%
AACTGAACTCCCAAAAACAA+TGG - chr1_4:52527150-52527169 Msa0169310:five_prime_UTR 35.0%
! TCAACATTTTACCGATACCC+TGG - chr1_4:52524032-52524051 Msa0169310:three_prime_UTR 40.0%
!!! TGTTTGTTGTTTTGGTGCCA+GGG + chr1_4:52524052-52524071 None:intergenic 40.0%
!!! TTGTTTGTTGTTTTGGTGCC+AGG + chr1_4:52524053-52524072 None:intergenic 40.0%
TCACGAATGTGTGAAGGATT+GGG + chr1_4:52524157-52524176 None:intergenic 40.0%
GAAAACTCACGAATGTGTGA+AGG + chr1_4:52524163-52524182 None:intergenic 40.0%
ATTGGAGATGAACCTGCAAA+GGG + chr1_4:52524681-52524700 None:intergenic 40.0%
CATGGTGGTAGAAAATGAGT+TGG + chr1_4:52524704-52524723 None:intergenic 40.0%
AGAAAATGCACCATCAGCTA+TGG + chr1_4:52524899-52524918 None:intergenic 40.0%
CTTCTAGATTTGACAATGCG+GGG - chr1_4:52524920-52524939 Msa0169310:CDS 40.0%
TTCTAGATTTGACAATGCGG+GGG - chr1_4:52524921-52524940 Msa0169310:CDS 40.0%
!! CTCTAACTGGTTTGAGCTAA+GGG - chr1_4:52524953-52524972 Msa0169310:CDS 40.0%
GCTAAGGGATAAAAAGTTGG+AGG - chr1_4:52524968-52524987 Msa0169310:CDS 40.0%
GGATAAAAAGTTGGAGGTCT+TGG - chr1_4:52524974-52524993 Msa0169310:CDS 40.0%
TTGTTTAATGTAGGTGGCAG+TGG - chr1_4:52525515-52525534 Msa0169310:CDS 40.0%
AGATGAAGTACAGTGCCAAT+CGG + chr1_4:52525893-52525912 None:intergenic 40.0%
TGATCATCTACAAGTACACC+AGG + chr1_4:52525986-52526005 None:intergenic 40.0%
TACTTCCAACGTTACAAAGC+AGG - chr1_4:52526027-52526046 Msa0169310:intron 40.0%
GTCAATGCAATACATCCTAC+TGG - chr1_4:52526055-52526074 Msa0169310:intron 40.0%
CAACATTTGCTTCAGTAGCT+TGG + chr1_4:52526093-52526112 None:intergenic 40.0%
TCTAATGAAACTCCCGAACT+TGG - chr1_4:52526172-52526191 Msa0169310:intron 40.0%
ATATCCTCTGAACCAAGTTC+GGG + chr1_4:52526187-52526206 None:intergenic 40.0%
GCAACATTACTAAGGATCTC+TGG + chr1_4:52526220-52526239 None:intergenic 40.0%
CAACAGATTATTGTTGCTCG+TGG - chr1_4:52526259-52526278 Msa0169310:intron 40.0%
TCAACACGTAACCAATGTTC+AGG - chr1_4:52526357-52526376 Msa0169310:intron 40.0%
TCCTTAAGTACAGGTTTACC+TGG - chr1_4:52526400-52526419 Msa0169310:CDS 40.0%
ACCAGGTAAACCTGTACTTA+AGG + chr1_4:52526404-52526423 None:intergenic 40.0%
!! GCTGGTAAAAGCACTTTACT+TGG - chr1_4:52526490-52526509 Msa0169310:intron 40.0%
ATTCCCTAAATTCGGCCTAA+GGG + chr1_4:52526563-52526582 None:intergenic 40.0%
AATTCCCTAAATTCGGCCTA+AGG + chr1_4:52526564-52526583 None:intergenic 40.0%
! GGTGAAATTCCTTTTCTTCC+CGG + chr1_4:52526736-52526755 None:intergenic 40.0%
GAAGAAAAGGAATTTCACCG+TGG - chr1_4:52526737-52526756 Msa0169310:intron 40.0%
AAGTCTTTCAGTTGTTCCCA+CGG + chr1_4:52526757-52526776 None:intergenic 40.0%
ATCTGGAGGGTTTATCCAAT+CGG - chr1_4:52526797-52526816 Msa0169310:intron 40.0%
AGAGTTAAAGAGAAGAGTCC+AGG - chr1_4:52526876-52526895 Msa0169310:intron 40.0%
GAGTTAAAGAGAAGAGTCCA+GGG - chr1_4:52526877-52526896 Msa0169310:intron 40.0%
TTGTTTACTTCCCCTGTACT+TGG - chr1_4:52527098-52527117 Msa0169310:five_prime_UTR 40.0%
!!! TTGTTTTGGTGCCAGGGTAT+CGG + chr1_4:52524046-52524065 None:intergenic 45.0%
CACGAATGTGTGAAGGATTG+GGG + chr1_4:52524156-52524175 None:intergenic 45.0%
CTCACGAATGTGTGAAGGAT+TGG + chr1_4:52524158-52524177 None:intergenic 45.0%
! ATTGGGGAATTTTGTCGAGC+AGG + chr1_4:52524379-52524398 None:intergenic 45.0%
CTCGAACTTGTGTATCGAGA+TGG - chr1_4:52524599-52524618 Msa0169310:CDS 45.0%
TTGGAGATGAACCTGCAAAG+GGG + chr1_4:52524680-52524699 None:intergenic 45.0%
GATTGGAGATGAACCTGCAA+AGG + chr1_4:52524682-52524701 None:intergenic 45.0%
TTTGCAAAAGCAGGAGATGG+TGG - chr1_4:52524829-52524848 Msa0169310:CDS 45.0%
! AAAGCAGGAGATGGTGGTAA+CGG - chr1_4:52524835-52524854 Msa0169310:CDS 45.0%
! CCTTTCTATCATGTCGACTG+CGG + chr1_4:52524876-52524895 None:intergenic 45.0%
GATAGAAAGGCCATAGCTGA+TGG - chr1_4:52524886-52524905 Msa0169310:CDS 45.0%
!! GCTCTAACTGGTTTGAGCTA+AGG - chr1_4:52524952-52524971 Msa0169310:CDS 45.0%
TTTAATGTAGGTGGCAGTGG+TGG - chr1_4:52525518-52525537 Msa0169310:CDS 45.0%
TTAATGTAGGTGGCAGTGGT+GGG - chr1_4:52525519-52525538 Msa0169310:CDS 45.0%
! GGTAGGTGGTGATGTAATTC+TGG - chr1_4:52525541-52525560 Msa0169310:intron 45.0%
TGGAATGCTCTCGTAGAGTT+TGG - chr1_4:52525561-52525580 Msa0169310:intron 45.0%
GGAATGCTCTCGTAGAGTTT+GGG - chr1_4:52525562-52525581 Msa0169310:intron 45.0%
! CGTAGAGTTTGGGATTTCAG+TGG - chr1_4:52525572-52525591 Msa0169310:intron 45.0%
GCATGGTAGATAGCAGGTAA+TGG - chr1_4:52525688-52525707 Msa0169310:CDS 45.0%
! TGGTAGATAGCAGGTAATGG+AGG - chr1_4:52525691-52525710 Msa0169310:intron 45.0%
!! ATAGCAGGTAATGGAGGACA+TGG - chr1_4:52525697-52525716 Msa0169310:intron 45.0%
AATAACCTTATCAGCACCCC+TGG + chr1_4:52525746-52525765 None:intergenic 45.0%
! TAGGTTGTTCGTGTACCGAT+TGG - chr1_4:52525875-52525894 Msa0169310:intron 45.0%
CAGATTATTGTTGCTCGTGG+AGG - chr1_4:52526262-52526281 Msa0169310:intron 45.0%
ACTGTCAGTGTCCTGAACAT+TGG + chr1_4:52526371-52526390 None:intergenic 45.0%
TTTGTGGGAATGCCTAATGC+TGG - chr1_4:52526472-52526491 Msa0169310:intron 45.0%
ACTATGCCTTCACTACCCTT+AGG - chr1_4:52526545-52526564 Msa0169310:intron 45.0%
ACTACCCTTAGGCCGAATTT+AGG - chr1_4:52526556-52526575 Msa0169310:CDS 45.0%
CTACCCTTAGGCCGAATTTA+GGG - chr1_4:52526557-52526576 Msa0169310:CDS 45.0%
TGTGCACCCTTTATAAGTCC+AGG + chr1_4:52526625-52526644 None:intergenic 45.0%
! CATGTCCAAGTCCACGATTT+TGG + chr1_4:52526648-52526667 None:intergenic 45.0%
GTGGGAACAACTGAAAGACT+TGG - chr1_4:52526756-52526775 Msa0169310:intron 45.0%
! TCTAGAGCTTGAGTACCATC+TGG - chr1_4:52526780-52526799 Msa0169310:intron 45.0%
GATTGGATAAACCCTCCAGA+TGG + chr1_4:52526798-52526817 None:intergenic 45.0%
ACAGCACTCACAGCAAAGAT+AGG + chr1_4:52526907-52526926 None:intergenic 45.0%
!!! CTTTGCTGTGAGTGCTGTTT+TGG - chr1_4:52526909-52526928 Msa0169310:intron 45.0%
!!! TGAGTGCTGTTTTGGAGGAA+GGG - chr1_4:52526917-52526936 Msa0169310:intron 45.0%
!! CTAAGACCAGCTTTAAGCTC+TGG + chr1_4:52526946-52526965 None:intergenic 45.0%
! GGTCTTAGAGTGCTTGTCAA+TGG - chr1_4:52526958-52526977 Msa0169310:intron 45.0%
ACACTCAACTCCAAGTACAG+GGG + chr1_4:52527111-52527130 None:intergenic 45.0%
CACACTCAACTCCAAGTACA+GGG + chr1_4:52527112-52527131 None:intergenic 45.0%
ACACACTCAACTCCAAGTAC+AGG + chr1_4:52527113-52527132 None:intergenic 45.0%
! TTGGAGTTGAGTGTGTTGCT+TGG - chr1_4:52527117-52527136 Msa0169310:five_prime_UTR 45.0%
AGGATTGGGGTCGAATTGGT+TGG + chr1_4:52524143-52524162 None:intergenic 50.0%
GTGAAGGATTGGGGTCGAAT+TGG + chr1_4:52524147-52524166 None:intergenic 50.0%
!! GCAAGCTTAGACTTGCTGTG+AGG + chr1_4:52524658-52524677 None:intergenic 50.0%
CCGCAGTCGACATGATAGAA+AGG - chr1_4:52524873-52524892 Msa0169310:CDS 50.0%
GATTTGACAATGCGGGGGAT+CGG - chr1_4:52524926-52524945 Msa0169310:CDS 50.0%
ATTTGACAATGCGGGGGATC+GGG - chr1_4:52524927-52524946 Msa0169310:CDS 50.0%
TAATGTAGGTGGCAGTGGTG+GGG - chr1_4:52525520-52525539 Msa0169310:CDS 50.0%
TCAGTGACACTAACGGTGCA+TGG - chr1_4:52525671-52525690 Msa0169310:CDS 50.0%
AACGGTGCATGGTAGATAGC+AGG - chr1_4:52525682-52525701 Msa0169310:CDS 50.0%
CTCGGCAGATTTAGACCCTT+GGG - chr1_4:52525955-52525974 Msa0169310:intron 50.0%
TTAGACCCTTGGGATGTTCC+TGG - chr1_4:52525965-52525984 Msa0169310:intron 50.0%
GTACACCAGGAACATCCCAA+GGG + chr1_4:52525973-52525992 None:intergenic 50.0%
AGTACACCAGGAACATCCCA+AGG + chr1_4:52525974-52525993 None:intergenic 50.0%
TGGAAGTAGAACCATCGCGA+GGG + chr1_4:52526015-52526034 None:intergenic 50.0%
TTGGAAGTAGAACCATCGCG+AGG + chr1_4:52526016-52526035 None:intergenic 50.0%
AACTCCCGAACTTGGTTCAG+AGG - chr1_4:52526180-52526199 Msa0169310:intron 50.0%
ATTGTTGCTCGTGGAGGAGA+AGG - chr1_4:52526268-52526287 Msa0169310:intron 50.0%
AAGGCATAGTGACCAACAGC+AGG + chr1_4:52526535-52526554 None:intergenic 50.0%
ATTCGGCCTAAGGGTAGTGA+AGG + chr1_4:52526554-52526573 None:intergenic 50.0%
! AAGGGTGCACACCAAAATCG+TGG - chr1_4:52526634-52526653 Msa0169310:CDS 50.0%
GCACACCAAAATCGTGGACT+TGG - chr1_4:52526640-52526659 Msa0169310:CDS 50.0%
GAACCTTCGTGCGTTCTATG+TGG + chr1_4:52526681-52526700 None:intergenic 50.0%
CATAGAACGCACGAAGGTTC+TGG - chr1_4:52526681-52526700 Msa0169310:exon 50.0%
!! CACGAAGGTTCTGGCTTATG+TGG - chr1_4:52526690-52526709 Msa0169310:five_prime_UTR 50.0%
! TCTGGCTTATGTGGTAGACG+TGG - chr1_4:52526699-52526718 Msa0169310:five_prime_UTR 50.0%
! GCTGCTTTACCGGGAAGAAA+AGG - chr1_4:52526724-52526743 Msa0169310:five_prime_UTR 50.0%
AGAGCTTGAGTACCATCTGG+AGG - chr1_4:52526783-52526802 Msa0169310:intron 50.0%
GAGCTTGAGTACCATCTGGA+GGG - chr1_4:52526784-52526803 Msa0169310:intron 50.0%
GACTATCAAGGATGGCCGAT+TGG + chr1_4:52526815-52526834 None:intergenic 50.0%
!! GATTGATGAGGAAGGTGCTG+AGG - chr1_4:52526843-52526862 Msa0169310:intron 50.0%
CAGCAAAGATAGGAACACCC+TGG + chr1_4:52526897-52526916 None:intergenic 50.0%
!!! TGCTGTGAGTGCTGTTTTGG+AGG - chr1_4:52526912-52526931 Msa0169310:intron 50.0%
!!! GTGAGTGCTGTTTTGGAGGA+AGG - chr1_4:52526916-52526935 Msa0169310:intron 50.0%
GGGATACCAGAGCTTAAAGC+TGG - chr1_4:52526937-52526956 Msa0169310:intron 50.0%
GTCTAAGCTTGCCCCTTTGC+AGG - chr1_4:52524666-52524685 Msa0169310:CDS 55.0%
GGAGGTCTTGGGTTCAAACC+CGG - chr1_4:52524986-52525005 Msa0169310:CDS 55.0%
!! AGGAACCAGGGGTGCTGATA+AGG - chr1_4:52525738-52525757 Msa0169310:intron 55.0%
CCAAGGGTCTAAATCTGCCG+AGG + chr1_4:52525957-52525976 None:intergenic 55.0%
CCTCGGCAGATTTAGACCCT+TGG - chr1_4:52525954-52525973 Msa0169310:intron 55.0%
AGTAGAACCATCGCGAGGGT+CGG + chr1_4:52526011-52526030 None:intergenic 55.0%
TGGGATGAAGAGCAGCCAGT+AGG + chr1_4:52526073-52526092 None:intergenic 55.0%
TTCGTAGTCGGAGGCTTCCT+AGG + chr1_4:52526325-52526344 None:intergenic 55.0%
TAGGAAGCCTCCGACTACGA+AGG - chr1_4:52526324-52526343 Msa0169310:intron 55.0%
TCGAGAGCTAAGCCTGCTGT+TGG - chr1_4:52526520-52526539 Msa0169310:intron 55.0%
!! AGACGTGGCTGCTGCTTTAC+CGG - chr1_4:52526714-52526733 Msa0169310:five_prime_UTR 55.0%
!! GGGGATCGGGTAGCTCTAAC+TGG - chr1_4:52524940-52524959 Msa0169310:CDS 60.0%
GATCATTCCGACCCTCGCGA+TGG - chr1_4:52526001-52526020 Msa0169310:intron 60.0%
GTTGCTCGTGGAGGAGAAGG+TGG - chr1_4:52526271-52526290 Msa0169310:intron 60.0%
CGTGGAGGAGAAGGTGGTCT+CGG - chr1_4:52526277-52526296 Msa0169310:intron 60.0%
AAGCCTCCGACTACGAAGGC+AGG - chr1_4:52526328-52526347 Msa0169310:intron 60.0%
AGCCTCCGACTACGAAGGCA+GGG - chr1_4:52526329-52526348 Msa0169310:intron 60.0%
CCTACCCCTGCCTTCGTAGT+CGG + chr1_4:52526337-52526356 None:intergenic 60.0%
GCGCCACATAGAACGCACGA+AGG - chr1_4:52526675-52526694 Msa0169310:exon 60.0%
!! GACGTGGCTGCTGCTTTACC+GGG - chr1_4:52526715-52526734 Msa0169310:five_prime_UTR 60.0%
! ATGTCGACTGCGGCGAGAGC+TGG + chr1_4:52524866-52524885 None:intergenic 65.0%
! GTAGGTGGCAGTGGTGGGGT+AGG - chr1_4:52525524-52525543 Msa0169310:intron 65.0%
GCCTCCGACTACGAAGGCAG+GGG - chr1_4:52526330-52526349 Msa0169310:intron 65.0%
ACCCCTGCCTTCGTAGTCGG+AGG + chr1_4:52526334-52526353 None:intergenic 65.0%
CCGACTACGAAGGCAGGGGT+AGG - chr1_4:52526334-52526353 Msa0169310:intron 65.0%
! GGTGGCAGTGGTGGGGTAGG+TGG - chr1_4:52525527-52525546 Msa0169310:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 52524008 52527229 52524008 ID=Msa0169310;Name=Msa0169310
chr1_4 mRNA 52524008 52527229 52524008 ID=Msa0169310-mRNA-1;Parent=Msa0169310;Name=Msa0169310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=236|0.8|0.83|1|0.6|0.5|6|203|502
chr1_4 exon 52524008 52525359 52524008 ID=Msa0169310-mRNA-1:exon:15601;Parent=Msa0169310-mRNA-1
chr1_4 exon 52525478 52525540 52525478 ID=Msa0169310-mRNA-1:exon:15600;Parent=Msa0169310-mRNA-1
chr1_4 exon 52525627 52525709 52525627 ID=Msa0169310-mRNA-1:exon:15599;Parent=Msa0169310-mRNA-1
chr1_4 exon 52526360 52526438 52526360 ID=Msa0169310-mRNA-1:exon:15598;Parent=Msa0169310-mRNA-1
chr1_4 exon 52526550 52526755 52526550 ID=Msa0169310-mRNA-1:exon:15597;Parent=Msa0169310-mRNA-1
chr1_4 exon 52527065 52527229 52527065 ID=Msa0169310-mRNA-1:exon:15596;Parent=Msa0169310-mRNA-1
chr1_4 five_prime_UTR 52527065 52527229 52527065 ID=Msa0169310-mRNA-1:five_prime_utr;Parent=Msa0169310-mRNA-1
chr1_4 five_prime_UTR 52526685 52526755 52526685 ID=Msa0169310-mRNA-1:five_prime_utr;Parent=Msa0169310-mRNA-1
chr1_4 CDS 52526550 52526684 52526550 ID=Msa0169310-mRNA-1:cds;Parent=Msa0169310-mRNA-1
chr1_4 CDS 52526360 52526438 52526360 ID=Msa0169310-mRNA-1:cds;Parent=Msa0169310-mRNA-1
chr1_4 CDS 52525627 52525709 52525627 ID=Msa0169310-mRNA-1:cds;Parent=Msa0169310-mRNA-1
chr1_4 CDS 52525478 52525540 52525478 ID=Msa0169310-mRNA-1:cds;Parent=Msa0169310-mRNA-1
chr1_4 CDS 52524211 52525359 52524211 ID=Msa0169310-mRNA-1:cds;Parent=Msa0169310-mRNA-1
chr1_4 three_prime_UTR 52524008 52524210 52524008 ID=Msa0169310-mRNA-1:three_prime_utr;Parent=Msa0169310-mRNA-1
Gene Sequence

>Msa0169310

ATGTTGGTGTTTGAAGCAAGATATGTTCGACAAGTAGAAGCTTTTACTCGAACTTGTGTATCGAGATGGTCTACTGTATTTTATTCTTGTTATTCAGATTCTCCTCACAGCAAGTCTAAGCTTGCCCCTTTGCAGGAGAGAAGAATGATTGACAAAGTTAAGATATTTGCAAAAGCAGGAGATGGTGGTAACGGTTGCACCAGCTCTCGCCGCAGTGGCAGTGGTGGGGTAGGTGGTGATGTAATTCTGGAATGCTCTCGTAGAGTTTGGGATTTCAGTGGTCTGCAGCGTCATCTAATAGCAGGTAATGGAGGACATGGATCATCAAAAAATAAGATAGGAACCAGGGGTGCTGATAAGGTTGTTCGTGTACCGATTGGCACTGTACTTCATCTTGTTAGTGGTGATATTCCTTCTATAGTAAAAAAAGTTCAATCCTCGGCAGATTTAGACCCTTGGGATGTTCCTGGTGTACTTGTAGATGATCATTCCGACCCTCGCGATGGTTCTACTTCCAACGTTACAAAGCAGGAAAAAGTCAATGCAATACATCCTACTGGCTGCTCTTCATCCCAAGCTACTGAAGCAAATGTTGAGAAGTCTGTAAAATCTACATGTGTTGCATCAGCAGATGTACTTTCTCAACTTTCATCTTCTAATGAAACTCCCGAACTTGGTTCAGAGGATATAGAAGAGAAACCAGAGATCCTTAGTAATGTTGCTGAATTAACAGAAGAAGGTCAACAGATTATTGTTGCTCGTGGAGGAGAAGGTGGTCTCGGTAATGTGTCTATTCAAAAAGATCCTAGGAAGCCTCCGACTACGAAGGCAGGGGTAGGTCAACACGTAACCAATGTTCAGGACACTGACAGTGTTAACTCTTCCTTAAGTACAGGTTTACCTGGTTCTGAAACTGTTCTTATATTAGAATTGAAGTGCATTGCTGATGTTAGTTTTGTGGGAATGCCTAATGCTGGTAAAAGCACTTTACTTGGAGCTATATCGAGAGCTAAGCCTGCTGTTGGTCACTATGCCTTCACTACCCTTAGGCCGAATTTAGGGAATTTGAACTATGATGATATGTCGATAATTGTGGCTGATATTCCTGGACTTATAAAGGGTGCACACCAAAATCGTGGACTTGGACATGCATTTCTGCGCCACATAGAACGCACGAAGGTTCTGGCTTATGTGGTAGACGTGGCTGCTGCTTTACCGGGAAGAAAAGGAATTTCACCGTGGGAACAACTGAAAGACTTGGTTCTAGAGCTTGAGTACCATCTGGAGGGTTTATCCAATCGGCCATCCTTGATAGTCGCAAATAAGATTGATGAGGAAGGTGCTGAGGAAGTGTATGAAGAGTTAAAGAGAAGAGTCCAGGGTGTTCCTATCTTTGCTGTGAGTGCTGTTTTGGAGGAAGGGATACCAGAGCTTAAAGCTGGTCTTAGAGTGCTTGTCAATGGTGAAACTTCATGCCCACTTTACCTAGATCAAATATCGCATGATTAG

Protein sequence

>Msa0169310

MLVFEARYVRQVEAFTRTCVSRWSTVFYSCYSDSPHSKSKLAPLQERRMIDKVKIFAKAGDGGNGCTSSRRSGSGGVGGDVILECSRRVWDFSGLQRHLIAGNGGHGSSKNKIGTRGADKVVRVPIGTVLHLVSGDIPSIVKKVQSSADLDPWDVPGVLVDDHSDPRDGSTSNVTKQEKVNAIHPTGCSSSQATEANVEKSVKSTCVASADVLSQLSSSNETPELGSEDIEEKPEILSNVAELTEEGQQIIVARGGEGGLGNVSIQKDPRKPPTTKAGVGQHVTNVQDTDSVNSSLSTGLPGSETVLILELKCIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYDDMSIIVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDVAAALPGRKGISPWEQLKDLVLELEYHLEGLSNRPSLIVANKIDEEGAEEVYEELKRRVQGVPIFAVSAVLEEGIPELKAGLRVLVNGETSCPLYLDQISHD*