Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128430 | sp|F4HXL0|PLIP2_ARATH | 57.143 | 728 | 267 | 13 | 1 | 698 | 1 | 713 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128430 | A0A396JY70 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0128430 | 0.800600 | 1.335778e-48 | -8.615850e-47 |
| Msa0004480 | Msa0128430 | 0.801803 | 7.579233e-49 | -8.615850e-47 |
| Msa0012710 | Msa0128430 | 0.803351 | 3.634297e-49 | -8.615850e-47 |
| Msa0017320 | Msa0128430 | 0.844750 | 6.230117e-59 | -8.615850e-47 |
| Msa0030480 | Msa0128430 | 0.966390 | 7.402462e-126 | -8.615850e-47 |
| Msa0030530 | Msa0128430 | 0.960883 | 4.608214e-119 | -8.615850e-47 |
| Msa0041690 | Msa0128430 | 0.808108 | 3.642484e-50 | -8.615850e-47 |
| Msa0043650 | Msa0128430 | 0.803924 | 2.764082e-49 | -8.615850e-47 |
| Msa0045550 | Msa0128430 | 0.812921 | 3.323521e-51 | -8.615850e-47 |
| Msa0046560 | Msa0128430 | 0.800636 | 1.313451e-48 | -8.615850e-47 |
| Msa0047640 | Msa0128430 | 0.834617 | 2.703072e-56 | -8.615850e-47 |
| Msa0051630 | Msa0128430 | 0.801261 | 9.787200e-49 | -8.615850e-47 |
| Msa0051740 | Msa0128430 | 0.813737 | 2.200203e-51 | -8.615850e-47 |
| Msa0071480 | Msa0128430 | 0.837015 | 6.670441e-57 | -8.615850e-47 |
| Msa0074750 | Msa0128430 | 0.816140 | 6.446088e-52 | -8.615850e-47 |
| Msa0081650 | Msa0128430 | 0.807252 | 5.534110e-50 | -8.615850e-47 |
| Msa0081940 | Msa0128430 | 0.979583 | 2.746199e-148 | -8.615850e-47 |
| Msa0082050 | Msa0128430 | 0.972163 | 2.547147e-134 | -8.615850e-47 |
| Msa0090510 | Msa0128430 | 0.802114 | 6.540203e-49 | -8.615850e-47 |
| Msa0111080 | Msa0128430 | 0.813582 | 2.379594e-51 | -8.615850e-47 |
| Msa0112270 | Msa0128430 | 0.809651 | 1.703231e-50 | -8.615850e-47 |
| Msa0119440 | Msa0128430 | 0.847267 | 1.288791e-59 | -8.615850e-47 |
| Msa0126880 | Msa0128430 | 0.804469 | 2.128326e-49 | -8.615850e-47 |
| Msa0128430 | Msa0136630 | 0.830336 | 3.111124e-55 | -8.615850e-47 |
| Msa0128430 | Msa0137510 | 0.836124 | 1.124768e-56 | -8.615850e-47 |
| Msa0128430 | Msa0139670 | 0.814781 | 1.293671e-51 | -8.615850e-47 |
| Msa0128430 | Msa0144430 | 0.818752 | 1.663275e-52 | -8.615850e-47 |
| Msa0128430 | Msa0146080 | 0.825164 | 5.440995e-54 | -8.615850e-47 |
| Msa0128430 | Msa0154920 | 0.806329 | 8.672136e-50 | -8.615850e-47 |
| Msa0128430 | Msa0171980 | 0.845954 | 2.941637e-59 | -8.615850e-47 |
| Msa0128430 | Msa0174000 | 0.805172 | 1.517383e-49 | -8.615850e-47 |
| Msa0128430 | Msa0174260 | 0.814588 | 1.427506e-51 | -8.615850e-47 |
| Msa0128430 | Msa0183910 | 0.810961 | 8.884828e-51 | -8.615850e-47 |
| Msa0128430 | Msa0187490 | 0.812645 | 3.820548e-51 | -8.615850e-47 |
| Msa0128430 | Msa0194010 | 0.824300 | 8.696155e-54 | -8.615850e-47 |
| Msa0128430 | Msa0210260 | 0.804708 | 1.897786e-49 | -8.615850e-47 |
| Msa0128430 | Msa0213430 | 0.828226 | 1.011302e-54 | -8.615850e-47 |
| Msa0128430 | Msa0233370 | 0.807781 | 4.274922e-50 | -8.615850e-47 |
| Msa0128430 | Msa0235880 | 0.833416 | 5.399858e-56 | -8.615850e-47 |
| Msa0128430 | Msa0240270 | 0.825056 | 5.770436e-54 | -8.615850e-47 |
| Msa0128430 | Msa0244970 | 0.811231 | 7.764155e-51 | -8.615850e-47 |
| Msa0128430 | Msa0259440 | 0.847267 | 1.288621e-59 | -8.615850e-47 |
| Msa0128430 | Msa0259580 | 0.845159 | 4.833231e-59 | -8.615850e-47 |
| Msa0128430 | Msa0283420 | 0.801854 | 7.396764e-49 | -8.615850e-47 |
| Msa0128430 | Msa0284240 | 0.818950 | 1.500130e-52 | -8.615850e-47 |
| Msa0128430 | Msa0304840 | 0.806789 | 6.936137e-50 | -8.615850e-47 |
| Msa0128430 | Msa0305620 | 0.837107 | 6.316200e-57 | -8.615850e-47 |
| Msa0128430 | Msa0321690 | 0.802805 | 4.712268e-49 | -8.615850e-47 |
| Msa0128430 | Msa0341230 | 0.808912 | 2.453281e-50 | -8.615850e-47 |
| Msa0128430 | Msa0347990 | 0.820202 | 7.768753e-53 | -8.615850e-47 |
| Msa0128430 | Msa0358110 | 0.853502 | 2.289959e-61 | -8.615850e-47 |
| Msa0128430 | Msa0358120 | 0.806645 | 7.439792e-50 | -8.615850e-47 |
| Msa0128430 | Msa0376600 | 0.807417 | 5.105905e-50 | -8.615850e-47 |
| Msa0128430 | Msa0378010 | 0.806489 | 8.024204e-50 | -8.615850e-47 |
| Msa0128430 | Msa0378970 | 0.803902 | 2.793387e-49 | -8.615850e-47 |
| Msa0128430 | Msa0380600 | 0.836464 | 9.218086e-57 | -8.615850e-47 |
| Msa0128430 | Msa0382310 | 0.841061 | 5.969626e-58 | -8.615850e-47 |
| Msa0128430 | Msa0382370 | 0.828409 | 9.137656e-55 | -8.615850e-47 |
| Msa0128430 | Msa0388650 | 0.801105 | 1.053311e-48 | -8.615850e-47 |
| Msa0128430 | Msa0394690 | 0.817208 | 3.715555e-52 | -8.615850e-47 |
| Msa0128430 | Msa0395980 | 0.801128 | 1.042250e-48 | -8.615850e-47 |
| Msa0128430 | Msa0403490 | 0.840403 | 8.879639e-58 | -8.615850e-47 |
| Msa0128430 | Msa0418400 | 0.840554 | 8.107868e-58 | -8.615850e-47 |
| Msa0128430 | Msa0427580 | 0.809878 | 1.522201e-50 | -8.615850e-47 |
| Msa0128430 | Msa0430060 | 0.804282 | 2.328136e-49 | -8.615850e-47 |
| Msa0128430 | Msa0430240 | 0.841578 | 4.363695e-58 | -8.615850e-47 |
| Msa0128430 | Msa0431210 | 0.830038 | 3.676571e-55 | -8.615850e-47 |
| Msa0128430 | Msa0432160 | 0.812947 | 3.280503e-51 | -8.615850e-47 |
| Msa0128430 | Msa0442310 | 0.801423 | 9.068165e-49 | -8.615850e-47 |
| Msa0128430 | Msa0472710 | 0.856135 | 3.946423e-62 | -8.615850e-47 |
| Msa0128430 | Msa0472720 | 0.803655 | 3.143022e-49 | -8.615850e-47 |
| Msa0128430 | Msa0472770 | 0.863163 | 3.029102e-64 | -8.615850e-47 |
| Msa0128430 | Msa0476680 | 0.812633 | 3.843643e-51 | -8.615850e-47 |
| Msa0128430 | Msa0482940 | 0.811981 | 5.333808e-51 | -8.615850e-47 |
| Msa0128430 | Msa0500400 | 0.800340 | 1.509110e-48 | -8.615850e-47 |
| Msa0128430 | Msa0514610 | 0.805263 | 1.452473e-49 | -8.615850e-47 |
| Msa0128430 | Msa0518170 | 0.809443 | 1.887347e-50 | -8.615850e-47 |
| Msa0128430 | Msa0520270 | 0.833293 | 5.796294e-56 | -8.615850e-47 |
| Msa0128430 | Msa0521010 | 0.808476 | 3.039937e-50 | -8.615850e-47 |
| Msa0128430 | Msa0538160 | 0.820093 | 8.229217e-53 | -8.615850e-47 |
| Msa0128430 | Msa0544730 | 0.817198 | 3.733774e-52 | -8.615850e-47 |
| Msa0128430 | Msa0560500 | 0.817880 | 2.620932e-52 | -8.615850e-47 |
| Msa0128430 | Msa0569780 | 0.822710 | 2.048253e-53 | -8.615850e-47 |
| Msa0128430 | Msa0572750 | 0.808734 | 2.677459e-50 | -8.615850e-47 |
| Msa0128430 | Msa0581970 | 0.805623 | 1.220642e-49 | -8.615850e-47 |
| Msa0128430 | Msa0583670 | 0.977130 | 3.613118e-143 | -8.615850e-47 |
| Msa0128430 | Msa0585070 | 0.815001 | 1.155979e-51 | -8.615850e-47 |
| Msa0128430 | Msa0597770 | 0.813975 | 1.949442e-51 | -8.615850e-47 |
| Msa0128430 | Msa0608270 | 0.802728 | 4.889002e-49 | -8.615850e-47 |
| Msa0128430 | Msa0616450 | 0.806663 | 7.373396e-50 | -8.615850e-47 |
| Msa0128430 | Msa0640940 | 0.802875 | 4.558203e-49 | -8.615850e-47 |
| Msa0128430 | Msa0641340 | 0.812312 | 4.515956e-51 | -8.615850e-47 |
| Msa0128430 | Msa0648830 | 0.807337 | 5.309217e-50 | -8.615850e-47 |
| Msa0128430 | Msa0655920 | 0.812947 | 3.281121e-51 | -8.615850e-47 |
| Msa0128430 | Msa0658680 | 0.810038 | 1.405749e-50 | -8.615850e-47 |
| Msa0128430 | Msa0659790 | 0.816379 | 5.699276e-52 | -8.615850e-47 |
| Msa0128430 | Msa0665520 | 0.801225 | 9.953962e-49 | -8.615850e-47 |
| Msa0128430 | Msa0697720 | 0.814305 | 1.648804e-51 | -8.615850e-47 |
| Msa0128430 | Msa0698440 | 0.802337 | 5.886306e-49 | -8.615850e-47 |
| Msa0128430 | Msa0701100 | 0.801265 | 9.768525e-49 | -8.615850e-47 |
| Msa0128430 | Msa0705390 | 0.824709 | 6.968417e-54 | -8.615850e-47 |
| Msa0128430 | Msa0709120 | 0.812662 | 3.787965e-51 | -8.615850e-47 |
| Msa0128430 | Msa0724370 | 0.829661 | 4.543439e-55 | -8.615850e-47 |
| Msa0128430 | Msa0743530 | 0.814249 | 1.696488e-51 | -8.615850e-47 |
| Msa0128430 | Msa0743870 | 0.806032 | 1.001798e-49 | -8.615850e-47 |
| Msa0128430 | Msa0748660 | 0.834788 | 2.447869e-56 | -8.615850e-47 |
| Msa0128430 | Msa0758250 | 0.862527 | 4.756800e-64 | -8.615850e-47 |
| Msa0128430 | Msa0764920 | 0.820263 | 7.522372e-53 | -8.615850e-47 |
| Msa0128430 | Msa0775560 | 0.800998 | 1.107844e-48 | -8.615850e-47 |
| Msa0128430 | Msa0775920 | 0.816798 | 4.593101e-52 | -8.615850e-47 |
| Msa0128430 | Msa0779260 | 0.813217 | 2.862693e-51 | -8.615850e-47 |
| Msa0128430 | Msa0789560 | 0.827184 | 1.799943e-54 | -8.615850e-47 |
| Msa0128430 | Msa0794210 | 0.802867 | 4.576807e-49 | -8.615850e-47 |
| Msa0128430 | Msa0799620 | 0.823433 | 1.389143e-53 | -8.615850e-47 |
| Msa0128430 | Msa0813260 | 0.832026 | 1.195201e-55 | -8.615850e-47 |
| Msa0128430 | Msa0844610 | 0.837097 | 6.353399e-57 | -8.615850e-47 |
| Msa0128430 | Msa0853810 | 0.810567 | 1.080938e-50 | -8.615850e-47 |
| Msa0128430 | Msa0860250 | 0.808295 | 3.322110e-50 | -8.615850e-47 |
| Msa0128430 | Msa0865970 | 0.847295 | 1.265920e-59 | -8.615850e-47 |
| Msa0128430 | Msa0866070 | 0.845567 | 3.747293e-59 | -8.615850e-47 |
| Msa0128430 | Msa0903780 | 0.807579 | 4.717135e-50 | -8.615850e-47 |
| Msa0128430 | Msa0907850 | 0.842078 | 3.220609e-58 | -8.615850e-47 |
| Msa0128430 | Msa0968050 | 0.800013 | 1.758886e-48 | -8.615850e-47 |
| Msa0128430 | Msa0969330 | 0.818944 | 1.504782e-52 | -8.615850e-47 |
| Msa0128430 | Msa0985220 | 0.806174 | 9.348846e-50 | -8.615850e-47 |
| Msa0128430 | Msa1030030 | 0.802357 | 5.830325e-49 | -8.615850e-47 |
| Msa0128430 | Msa1034700 | 0.843607 | 1.263154e-58 | -8.615850e-47 |
| Msa0128430 | Msa1036740 | 0.810852 | 9.380704e-51 | -8.615850e-47 |
| Msa0128430 | Msa1042660 | 0.823676 | 1.218235e-53 | -8.615850e-47 |
| Msa0128430 | Msa1063370 | 0.818296 | 2.111352e-52 | -8.615850e-47 |
| Msa0128430 | Msa1074110 | 0.832852 | 7.461581e-56 | -8.615850e-47 |
| Msa0128430 | Msa1074350 | 0.809207 | 2.120807e-50 | -8.615850e-47 |
| Msa0128430 | Msa1074540 | 0.839777 | 1.293310e-57 | -8.615850e-47 |
| Msa0128430 | Msa1108720 | 0.830396 | 3.007684e-55 | -8.615850e-47 |
| Msa0128430 | Msa1109780 | -0.804942 | 1.695544e-49 | -8.615850e-47 |
| Msa0128430 | Msa1123350 | 0.808517 | 2.978474e-50 | -8.615850e-47 |
| Msa0128430 | Msa1126240 | 0.813569 | 2.395899e-51 | -8.615850e-47 |
| Msa0128430 | Msa1127430 | 0.848304 | 6.673640e-60 | -8.615850e-47 |
| Msa0128430 | Msa1131090 | 0.805556 | 1.261036e-49 | -8.615850e-47 |
| Msa0128430 | Msa1152410 | 0.815373 | 9.559755e-52 | -8.615850e-47 |
| Msa0128430 | Msa1156820 | 0.825760 | 3.931948e-54 | -8.615850e-47 |
| Msa0128430 | Msa1163870 | 0.806005 | 1.014862e-49 | -8.615850e-47 |
| Msa0128430 | Msa1163880 | 0.806633 | 7.480983e-50 | -8.615850e-47 |
| Msa0128430 | Msa1165490 | 0.819042 | 1.429620e-52 | -8.615850e-47 |
| Msa0128430 | Msa1184780 | 0.831540 | 1.575419e-55 | -8.615850e-47 |
| Msa0128430 | Msa1197070 | 0.807526 | 4.841858e-50 | -8.615850e-47 |
| Msa0128430 | Msa1201640 | 0.818019 | 2.437887e-52 | -8.615850e-47 |
| Msa0128430 | Msa1206650 | 0.847760 | 9.432993e-60 | -8.615850e-47 |
| Msa0128430 | Msa1209190 | 0.848514 | 5.839144e-60 | -8.615850e-47 |
| Msa0128430 | Msa1209860 | 0.826669 | 2.389936e-54 | -8.615850e-47 |
| Msa0128430 | Msa1214320 | 0.809479 | 1.854159e-50 | -8.615850e-47 |
| Msa0128430 | Msa1234620 | 0.818781 | 1.638814e-52 | -8.615850e-47 |
| Msa0128430 | Msa1254620 | 0.837058 | 6.502079e-57 | -8.615850e-47 |
| Msa0128430 | Msa1257070 | 0.829843 | 4.103856e-55 | -8.615850e-47 |
| Msa0128430 | Msa1260680 | 0.816604 | 5.076816e-52 | -8.615850e-47 |
| Msa0128430 | Msa1261850 | 0.813094 | 3.046490e-51 | -8.615850e-47 |
| Msa0128430 | Msa1264420 | 0.814784 | 1.291594e-51 | -8.615850e-47 |
| Msa0128430 | Msa1266330 | 0.827358 | 1.635376e-54 | -8.615850e-47 |
| Msa0128430 | Msa1270660 | 0.814423 | 1.552780e-51 | -8.615850e-47 |
| Msa0128430 | Msa1280170 | 0.816936 | 4.276461e-52 | -8.615850e-47 |
| Msa0128430 | Msa1285200 | 0.823805 | 1.136661e-53 | -8.615850e-47 |
| Msa0128430 | Msa1298100 | 0.868527 | 6.112202e-66 | -8.615850e-47 |
| Msa0128430 | Msa1304810 | 0.818748 | 1.667113e-52 | -8.615850e-47 |
| Msa0128430 | Msa1330550 | 0.807037 | 6.146832e-50 | -8.615850e-47 |
| Msa0128430 | Msa1332050 | 0.817868 | 2.638230e-52 | -8.615850e-47 |
| Msa0128430 | Msa1334400 | 0.815813 | 7.627627e-52 | -8.615850e-47 |
| Msa0128430 | Msa1336040 | 0.841520 | 4.520434e-58 | -8.615850e-47 |
| Msa0128430 | Msa1360420 | 0.801179 | 1.017208e-48 | -8.615850e-47 |
| Msa0128430 | Msa1361250 | 0.805785 | 1.128778e-49 | -8.615850e-47 |
| Msa0128430 | Msa1366550 | 0.846206 | 2.512217e-59 | -8.615850e-47 |
| Msa0128430 | Msa1369690 | 0.800628 | 1.318122e-48 | -8.615850e-47 |
| Msa0128430 | Msa1370590 | 0.812718 | 3.681324e-51 | -8.615850e-47 |
| Msa0128430 | Msa1382020 | 0.813026 | 3.151932e-51 | -8.615850e-47 |
| Msa0128430 | Msa1384100 | 0.813003 | 3.189006e-51 | -8.615850e-47 |
| Msa0128430 | Msa1399260 | 0.809865 | 1.531730e-50 | -8.615850e-47 |
| Msa0128430 | Msa1411980 | 0.812008 | 5.261829e-51 | -8.615850e-47 |
| Msa0128430 | Msa1416260 | 0.812969 | 3.244215e-51 | -8.615850e-47 |
| Msa0128430 | Msa1421900 | 0.875519 | 2.890430e-68 | -8.615850e-47 |
| Msa0128430 | Msa1426910 | 0.808232 | 3.426386e-50 | -8.615850e-47 |
| Msa0128430 | Msa1434040 | 0.817900 | 2.593610e-52 | -8.615850e-47 |
| Msa0128430 | Msa1444120 | 0.818851 | 1.579985e-52 | -8.615850e-47 |
| Msa0128430 | Msa1450720 | 0.823532 | 1.316679e-53 | -8.615850e-47 |
| Msa0128430 | Msa1454960 | 0.800872 | 1.175288e-48 | -8.615850e-47 |
| Msa0128430 | Msa1462470 | 0.818099 | 2.339350e-52 | -8.615850e-47 |
| Msa0128430 | Msa1463030 | 0.843054 | 1.773461e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128430 | MtrunA17_Chr1g0194901 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Msa0128430 | MtrunA17_Chr7g0269851 | 60.492 | 691 | 187 | 13 | 30 | 683 | 39 | 680 | 0.0 | 758 |
| Msa0128430 | MtrunA17_Chr7g0275571 | 45.946 | 555 | 260 | 10 | 97 | 624 | 126 | 667 | 3.06e-150 | 452 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128430 | AT1G02660.1 | 57.143 | 728 | 267 | 13 | 1 | 698 | 1 | 713 | 0.0 | 746 |
| Msa0128430 | AT3G62590.1 | 50.840 | 714 | 255 | 15 | 1 | 695 | 1 | 637 | 0.0 | 605 |
| Msa0128430 | AT3G61680.2 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.30e-150 | 452 |
| Msa0128430 | AT3G61680.1 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.30e-150 | 452 |
| Msa0128430 | AT3G61680.3 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.30e-150 | 452 |
Find 166 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATTACCTTGATATT+TGG | 0.154361 | 1_3:-58157074 | None:intergenic |
| AGAAACCCTCCTTAGCATTT+TGG | 0.155210 | 1_3:-58156991 | None:intergenic |
| ATCCTATATCCACCATTATT+TGG | 0.160237 | 1_3:-58158011 | None:intergenic |
| AAGAAATGAATGAATATTTA+AGG | 0.170551 | 1_3:-58156314 | None:intergenic |
| GCAATTACCTCAAATTTAAT+TGG | 0.213954 | 1_3:-58158498 | None:intergenic |
| CCCTGCTAGGATGTTAATAT+TGG | 0.229996 | 1_3:+58159728 | Msa0128430:CDS |
| TACGGATCTGGTTAAGTTCT+TGG | 0.252856 | 1_3:-58159488 | None:intergenic |
| GTCTCTCGACGACGCCGTTT+TGG | 0.268578 | 1_3:+58156716 | Msa0128430:CDS |
| AATGCTAAGGAGGGTTTCTT+TGG | 0.270200 | 1_3:+58156995 | Msa0128430:CDS |
| GATGTCACACTTGGGGAGTT+TGG | 0.270494 | 1_3:+58157040 | Msa0128430:CDS |
| CCTGCTAGGATGTTAATATT+GGG | 0.281713 | 1_3:+58159729 | Msa0128430:CDS |
| CTACTTCCTGTGATAACATT+TGG | 0.282356 | 1_3:+58158840 | Msa0128430:CDS |
| TGCCTTGCGGCAGAAGATTA+TGG | 0.283373 | 1_3:-58159266 | None:intergenic |
| CAGGAAGAGAGTCCTTAAAA+AGG | 0.312198 | 1_3:+58159652 | Msa0128430:CDS |
| TCCACCATTATTTGGCTCCT+TGG | 0.317715 | 1_3:-58158003 | None:intergenic |
| TTTAGGTGAGCATGAACTTC+TGG | 0.322356 | 1_3:-58158705 | None:intergenic |
| TTAAGTGACCGATCTGCTTA+TGG | 0.329267 | 1_3:+58159396 | Msa0128430:CDS |
| CATTTCATATCATTCATCTA+AGG | 0.331288 | 1_3:-58159770 | None:intergenic |
| CTTGGTGAAAATTTCTCATC+TGG | 0.344080 | 1_3:-58159243 | None:intergenic |
| CTTGATATTTGGTATAGAAT+AGG | 0.352328 | 1_3:-58157063 | None:intergenic |
| GATACCCATTGGAATCTCTA+TGG | 0.358600 | 1_3:+58156661 | Msa0128430:CDS |
| CATGTCATGATCTCTTTGTA+TGG | 0.368198 | 1_3:-58159430 | None:intergenic |
| AGGATGGGCAGAGAGAGAAT+TGG | 0.368257 | 1_3:+58156784 | Msa0128430:CDS |
| AGCTTCTTGTCCGTGTCATT+AGG | 0.369839 | 1_3:-58159324 | None:intergenic |
| GGATGGGCAGAGAGAGAATT+GGG | 0.390719 | 1_3:+58156785 | Msa0128430:CDS |
| CTCGCATCGATTTACGGATC+TGG | 0.403958 | 1_3:-58159500 | None:intergenic |
| CGCAGAAGTGGCATCTTTGA+TGG | 0.405975 | 1_3:+58158169 | Msa0128430:CDS |
| CGTGCAACTTTCCGTTTCAC+TGG | 0.411226 | 1_3:+58158741 | Msa0128430:CDS |
| CGTTTCACTGGACATTCCCT+TGG | 0.413018 | 1_3:+58158753 | Msa0128430:CDS |
| CAACGCCAGTCACCGTTCTC+TGG | 0.414357 | 1_3:+58159618 | Msa0128430:CDS |
| GACCGATCTGCTTATGGATC+TGG | 0.419315 | 1_3:+58159402 | Msa0128430:CDS |
| TGAATGAATATTTAAGGGTA+TGG | 0.439752 | 1_3:-58156308 | None:intergenic |
| CCCAATATTAACATCCTAGC+AGG | 0.442858 | 1_3:-58159729 | None:intergenic |
| AGAAATGAATGAATATTTAA+GGG | 0.445521 | 1_3:-58156313 | None:intergenic |
| TTGATACCAGCATTGTTGTT+GGG | 0.446372 | 1_3:+58159568 | Msa0128430:CDS |
| TTCACGACCCACCGCACTTA+CGG | 0.447728 | 1_3:-58156598 | None:intergenic |
| ACATTCCCTTGGTGGAAGCT+TGG | 0.448070 | 1_3:+58158764 | Msa0128430:CDS |
| GACAGCAGTGGTTGCGGCAA+AGG | 0.448188 | 1_3:+58158208 | Msa0128430:CDS |
| ATTGTTCCTTCGATCTCCAT+TGG | 0.450078 | 1_3:+58156534 | Msa0128430:CDS |
| TTCACTGGACATTCCCTTGG+TGG | 0.452430 | 1_3:+58158756 | Msa0128430:CDS |
| GAAACCAAGGAGCCAAATAA+TGG | 0.453919 | 1_3:+58157999 | Msa0128430:CDS |
| GGGAAACTCTTAAAACATTA+CGG | 0.455788 | 1_3:+58157882 | Msa0128430:CDS |
| GTTCGGAGTCATTAGCATCT+TGG | 0.455806 | 1_3:+58158454 | Msa0128430:CDS |
| GTTCAAGAACGTCAACTTTG+CGG | 0.456069 | 1_3:-58159352 | None:intergenic |
| CCTGCACGTGGCTTCGCGGC+AGG | 0.457427 | 1_3:-58158911 | None:intergenic |
| TTCTCTATTATCTTCCAAAA+CGG | 0.458755 | 1_3:-58156730 | None:intergenic |
| CACATGGTTAGCTGAATGTT+AGG | 0.465272 | 1_3:+58159840 | Msa0128430:three_prime_UTR |
| GTTCCTTCGATCTCCATTGG+TGG | 0.483103 | 1_3:+58156537 | Msa0128430:CDS |
| ACACAAATAAATGCATGTGT+TGG | 0.484143 | 1_3:-58159695 | None:intergenic |
| CGCATCTACCGTAAGTGCGG+TGG | 0.485121 | 1_3:+58156590 | Msa0128430:CDS |
| TGTTGGGAGGTCCATGGTAT+CGG | 0.485167 | 1_3:+58159584 | Msa0128430:CDS |
| GTTATAGATGACGGTGAGGA+TGG | 0.490623 | 1_3:+58156768 | Msa0128430:CDS |
| AAGGGTATGGAACCTAAAAC+AGG | 0.491510 | 1_3:-58156295 | None:intergenic |
| ACTTCTTCAAATGCAGCGGC+TGG | 0.497103 | 1_3:+58158113 | Msa0128430:CDS |
| AGCCAAATAATGGTGGATAT+AGG | 0.497389 | 1_3:+58158009 | Msa0128430:CDS |
| CTTAATATCTCAAGTGGATG+AGG | 0.501462 | 1_3:-58159378 | None:intergenic |
| GTTGATACCAGCATTGTTGT+TGG | 0.504284 | 1_3:+58159567 | Msa0128430:CDS |
| ATTGCCTGCACGTGGCTTCG+CGG | 0.504752 | 1_3:-58158915 | None:intergenic |
| CCTGCCGCGAAGCCACGTGC+AGG | 0.508181 | 1_3:+58158911 | Msa0128430:CDS |
| GTATATATGAGGCTGCTAAA+GGG | 0.510063 | 1_3:+58158664 | Msa0128430:CDS |
| CACAAATAAATGCATGTGTT+GGG | 0.510490 | 1_3:-58159694 | None:intergenic |
| TTCAGTGACAGCAGTGGTTG+CGG | 0.512338 | 1_3:+58158202 | Msa0128430:CDS |
| CTCGTTCGTCACCTTGCGAA+TGG | 0.517823 | 1_3:+58158270 | Msa0128430:CDS |
| GGTATATATGAGGCTGCTAA+AGG | 0.517913 | 1_3:+58158663 | Msa0128430:CDS |
| CATTGTTGTTGGGAGGTCCA+TGG | 0.518484 | 1_3:+58159578 | Msa0128430:CDS |
| CAAGGGAATGTCCAGTGAAA+CGG | 0.522758 | 1_3:-58158752 | None:intergenic |
| CTATTCTATACCAAATATCA+AGG | 0.525327 | 1_3:+58157064 | Msa0128430:CDS |
| AATGTTTGGAAAGGGGAACA+AGG | 0.528089 | 1_3:+58156831 | Msa0128430:CDS |
| ATCCTCACCGTCATCTATAA+CGG | 0.528135 | 1_3:-58156766 | None:intergenic |
| AAAATCTGAGAAAATTCCTC+AGG | 0.530787 | 1_3:+58157950 | Msa0128430:CDS |
| AATCTTCTGCCGCAAGGCAG+TGG | 0.532114 | 1_3:+58159270 | Msa0128430:CDS |
| AAGCTACTATACACACCAAT+GGG | 0.534284 | 1_3:+58159201 | Msa0128430:CDS |
| CATATATACCTCTGTGCACA+AGG | 0.536219 | 1_3:-58158650 | None:intergenic |
| TTATGCCAGAGAACGGTGAC+TGG | 0.536435 | 1_3:-58159623 | None:intergenic |
| AAGAATATTCCTCTACAAGT+AGG | 0.536681 | 1_3:-58159912 | None:intergenic |
| TCAAATGCAGCGGCTGGTGA+AGG | 0.538184 | 1_3:+58158119 | Msa0128430:CDS |
| CTTCTGCGTTCATCATGTCA+AGG | 0.540763 | 1_3:-58158154 | None:intergenic |
| CTCAAGAATCCTACTTGTAG+AGG | 0.543768 | 1_3:+58159903 | Msa0128430:three_prime_UTR |
| TTCTCTGGCATAATGAAGAC+AGG | 0.544083 | 1_3:+58159633 | Msa0128430:CDS |
| AGAACGTCAACTTTGCGGCT+CGG | 0.546820 | 1_3:-58159347 | None:intergenic |
| AGAATCAGCAATTCACCCAT+TGG | 0.548209 | 1_3:-58159216 | None:intergenic |
| CTGCTAGGATGTTAATATTG+GGG | 0.549191 | 1_3:+58159730 | Msa0128430:CDS |
| GGTTCCCCTTCCATCATGTG+TGG | 0.551578 | 1_3:+58158861 | Msa0128430:CDS |
| CGCCTCCACACATGATGGAA+GGG | 0.552230 | 1_3:-58158866 | None:intergenic |
| ATGTGAAGAATGTTTGGAAA+GGG | 0.553617 | 1_3:+58156823 | Msa0128430:CDS |
| TGCGGCAGAAGATTATGGCT+TGG | 0.555573 | 1_3:-58159261 | None:intergenic |
| CGGTCACTTAATATCTCAAG+TGG | 0.555750 | 1_3:-58159384 | None:intergenic |
| AGCAGTGGTTGCGGCAAAGG+AGG | 0.558429 | 1_3:+58158211 | Msa0128430:CDS |
| GGCAAAGGAGGAAGTAAAGC+AGG | 0.560431 | 1_3:+58158223 | Msa0128430:CDS |
| GGACCTCCCAACAACAATGC+TGG | 0.562296 | 1_3:-58159574 | None:intergenic |
| GCTGCATTTGAAGAAGTGAA+TGG | 0.563038 | 1_3:-58158107 | None:intergenic |
| CATGTGAAGAATGTTTGGAA+AGG | 0.563671 | 1_3:+58156822 | Msa0128430:CDS |
| ATACCAGCATTGTTGTTGGG+AGG | 0.566961 | 1_3:+58159571 | Msa0128430:CDS |
| GTATGCTCAGATGTCACACT+TGG | 0.567630 | 1_3:+58157031 | Msa0128430:CDS |
| CAGAGAACGGTGACTGGCGT+TGG | 0.568268 | 1_3:-58159617 | None:intergenic |
| TGACATGATGAACGCAGAAG+TGG | 0.568983 | 1_3:+58158157 | Msa0128430:CDS |
| CGATCTGCTTATGGATCTGG+AGG | 0.572142 | 1_3:+58159405 | Msa0128430:CDS |
| TTTACTTGGTTATTGAGACA+TGG | 0.572898 | 1_3:-58159038 | None:intergenic |
| TTACTTGGTTATTGAGACAT+GGG | 0.574179 | 1_3:-58159037 | None:intergenic |
| TCTTTACTTTCGACTTCCTG+AGG | 0.574252 | 1_3:-58157966 | None:intergenic |
| CAAGGGAATCATGAAAGAGA+AGG | 0.574584 | 1_3:+58156849 | Msa0128430:CDS |
| CTCACCGTCATCTATAACGG+TGG | 0.576554 | 1_3:-58156763 | None:intergenic |
| TTATAGATGACGGTGAGGAT+GGG | 0.579980 | 1_3:+58156769 | Msa0128430:CDS |
| CGACGGAACAGAACGTTCAG+TGG | 0.580188 | 1_3:+58156690 | Msa0128430:CDS |
| AGAGAAGCAAGAAGAAACCA+AGG | 0.581266 | 1_3:+58157986 | Msa0128430:CDS |
| TCGCCTCCACACATGATGGA+AGG | 0.582366 | 1_3:-58158867 | None:intergenic |
| TCCATGGTATCGGTCAGTAT+CGG | 0.583827 | 1_3:+58159594 | Msa0128430:CDS |
| GGGGAACCAAATGTTATCAC+AGG | 0.584190 | 1_3:-58158846 | None:intergenic |
| AAAACAAAACAACCTGCGTA+AGG | 0.585604 | 1_3:+58156396 | Msa0128430:five_prime_UTR |
| GCCGATACTGACCGATACCA+TGG | 0.588719 | 1_3:-58159595 | None:intergenic |
| GAGAGAAAAGACGCAAGGTA+TGG | 0.588772 | 1_3:+58159520 | Msa0128430:CDS |
| GTGTATAAAACAAGGGCACA+TGG | 0.588841 | 1_3:+58159824 | Msa0128430:three_prime_UTR |
| GCATTATAATTGCCTGCACG+TGG | 0.590797 | 1_3:-58158923 | None:intergenic |
| GAAGCTACTATACACACCAA+TGG | 0.592530 | 1_3:+58159200 | Msa0128430:intron |
| TAGTGCCAAGCTTCCACCAA+GGG | 0.594028 | 1_3:-58158769 | None:intergenic |
| TGTGCACAGAGGTATATATG+AGG | 0.594337 | 1_3:+58158653 | Msa0128430:CDS |
| GACACTCTACTTGAAAAGCT+TGG | 0.594758 | 1_3:+58158888 | Msa0128430:CDS |
| CTCCAGATCCATAAGCAGAT+CGG | 0.594796 | 1_3:-58159404 | None:intergenic |
| AGCCATAATCTTCTGCCGCA+AGG | 0.595034 | 1_3:+58159264 | Msa0128430:CDS |
| AACGTTCTGTTCCGTCGTTG+TGG | 0.595293 | 1_3:-58156684 | None:intergenic |
| ATGTTTGGAAAGGGGAACAA+GGG | 0.596462 | 1_3:+58156832 | Msa0128430:CDS |
| TATGCTCAGATGTCACACTT+GGG | 0.597591 | 1_3:+58157032 | Msa0128430:CDS |
| ACAGGAAGTAGAGAGGTGAT+TGG | 0.597627 | 1_3:-58158828 | None:intergenic |
| AGTGTCGCCTCCACACATGA+TGG | 0.598823 | 1_3:-58158871 | None:intergenic |
| AGAAAAGACGCAAGGTATGG+TGG | 0.599163 | 1_3:+58159523 | Msa0128430:CDS |
| GCCTCCACACATGATGGAAG+GGG | 0.599219 | 1_3:-58158865 | None:intergenic |
| GTGGCCATAGAGATTCCAAT+GGG | 0.600305 | 1_3:-58156665 | None:intergenic |
| TCCCCTTCCATCATGTGTGG+AGG | 0.601542 | 1_3:+58158864 | Msa0128430:CDS |
| GTCTTCATTATGCCAGAGAA+CGG | 0.604223 | 1_3:-58159630 | None:intergenic |
| CGCACTTACGGTAGATGCGG+TGG | 0.605825 | 1_3:-58156586 | None:intergenic |
| TGCTAGGATGTTAATATTGG+GGG | 0.605936 | 1_3:+58159731 | Msa0128430:CDS |
| ACCAAGGAGCCAAATAATGG+TGG | 0.606415 | 1_3:+58158002 | Msa0128430:CDS |
| ATTCACTTCTTCAAATGCAG+CGG | 0.610395 | 1_3:+58158109 | Msa0128430:CDS |
| GCATCTACCGTAAGTGCGGT+GGG | 0.614606 | 1_3:+58156591 | Msa0128430:CDS |
| GTGCAGATAAGATGCAGCAG+AGG | 0.621656 | 1_3:-58158063 | None:intergenic |
| GATCCACCAATGGAGATCGA+AGG | 0.628096 | 1_3:-58156540 | None:intergenic |
| ACTCGTCGCGGTAGTACAAG+AGG | 0.630459 | 1_3:-58159546 | None:intergenic |
| AATCTCTATGGCCACAACGA+CGG | 0.633455 | 1_3:+58156673 | Msa0128430:CDS |
| TGTGGCCATAGAGATTCCAA+TGG | 0.646166 | 1_3:-58156666 | None:intergenic |
| AGGGAAAAGTGTATAAAACA+AGG | 0.646888 | 1_3:+58159816 | Msa0128430:three_prime_UTR |
| TCGCAGATGAACCATTCGCA+AGG | 0.648265 | 1_3:-58158281 | None:intergenic |
| CACCGCATCTACCGTAAGTG+CGG | 0.649836 | 1_3:+58156587 | Msa0128430:CDS |
| TGTATCTAAAGATCCACCAA+TGG | 0.652056 | 1_3:-58156550 | None:intergenic |
| ATGCTCAGATGTCACACTTG+GGG | 0.652908 | 1_3:+58157033 | Msa0128430:CDS |
| AAAACCACCGTTATAGATGA+CGG | 0.656587 | 1_3:+58156759 | Msa0128430:CDS |
| TGGATATAGGATAAGTGCAA+CGG | 0.659737 | 1_3:+58158022 | Msa0128430:CDS |
| CACCGCACTTACGGTAGATG+CGG | 0.662356 | 1_3:-58156589 | None:intergenic |
| TTGGATGTCCTTGTGCACAG+AGG | 0.663273 | 1_3:+58158642 | Msa0128430:CDS |
| AGATATAGACCACTGCCTTG+CGG | 0.663361 | 1_3:-58159279 | None:intergenic |
| CCAATATTAACATCCTAGCA+GGG | 0.667471 | 1_3:-58159728 | None:intergenic |
| GTGTCATTAGGTTCTGACAA+AGG | 0.671563 | 1_3:-58159312 | None:intergenic |
| CATGCTCACCTAAAATCTCG+AGG | 0.672833 | 1_3:+58158714 | Msa0128430:CDS |
| TACTGATTCAGTGACAGCAG+TGG | 0.675088 | 1_3:+58158196 | Msa0128430:CDS |
| GATGCGAGAGAAAAGACGCA+AGG | 0.678863 | 1_3:+58159515 | Msa0128430:CDS |
| TGTTATCACAGGAAGTAGAG+AGG | 0.682469 | 1_3:-58158835 | None:intergenic |
| CACCGTTATAGATGACGGTG+AGG | 0.686310 | 1_3:+58156764 | Msa0128430:CDS |
| TTTGTCAGAACCTAATGACA+CGG | 0.688799 | 1_3:+58159314 | Msa0128430:CDS |
| ATGTTGTTGTTACCTTACGC+AGG | 0.691790 | 1_3:-58156408 | None:intergenic |
| GGGAAAAGTGTATAAAACAA+GGG | 0.692115 | 1_3:+58159817 | Msa0128430:three_prime_UTR |
| TGTGAAGAATGTTTGGAAAG+GGG | 0.703391 | 1_3:+58156824 | Msa0128430:CDS |
| GTAGTGCCAAGCTTCCACCA+AGG | 0.715098 | 1_3:-58158770 | None:intergenic |
| TCAAGTTTGTGATACTTGCG+CGG | 0.721242 | 1_3:+58156911 | Msa0128430:CDS |
| ATCTGCGATGATAACCAGAG+TGG | 0.733794 | 1_3:+58158296 | Msa0128430:CDS |
| TAATTGCAAGAAAATGCTCG+CGG | 0.749108 | 1_3:-58158960 | None:intergenic |
| ATGCTGGTATCAACTCGTCG+CGG | 0.755961 | 1_3:-58159558 | None:intergenic |
| GCTGAGAATGATGAAAACAA+CGG | 0.787436 | 1_3:+58156879 | Msa0128430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTATATAAATTATATTATT+TGG | + | chr1_3:58158368-58158387 | Msa0128430:intron | 10.0% |
| !! | AGAAATGAATGAATATTTAA+GGG | - | chr1_3:58156316-58156335 | None:intergenic | 15.0% |
| !! | AAGAAATGAATGAATATTTA+AGG | - | chr1_3:58156317-58156336 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTCTTTGTTTT+CGG | - | chr1_3:58156482-58156501 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTGGATCATT+CGG | + | chr1_3:58157141-58157160 | Msa0128430:intron | 15.0% |
| !! | TAAAATTAAAAGACAAACTT+TGG | - | chr1_3:58157360-58157379 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACAAAAACTTTT+TGG | - | chr1_3:58159083-58159102 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTCTTTATTGAT+AGG | + | chr1_3:58159090-58159109 | Msa0128430:intron | 15.0% |
| !!! | ATTCATATTTTTTATTACGA+GGG | + | chr1_3:58159793-58159812 | Msa0128430:three_prime_UTR | 15.0% |
| !!! | TTGTTTTTGTTTTGATTTGA+TGG | - | chr1_3:58156383-58156402 | None:intergenic | 20.0% |
| !! | AAACTATGTGTTTAAAAACT+GGG | + | chr1_3:58156511-58156530 | Msa0128430:CDS | 20.0% |
| !! | AAACAAATTACCTTGATATT+TGG | - | chr1_3:58157077-58157096 | None:intergenic | 20.0% |
| !!! | GCTTTATGGTTTTTAAATTT+TGG | + | chr1_3:58157132-58157151 | Msa0128430:intron | 20.0% |
| !!! | TATTTTGTTTTTATGTGATC+TGG | + | chr1_3:58157247-58157266 | Msa0128430:intron | 20.0% |
| !!! | TTTGTCTTTTAATTTTAGCA+TGG | + | chr1_3:58157363-58157382 | Msa0128430:intron | 20.0% |
| !!! | TACAAGATTTTTTGTTATTC+AGG | + | chr1_3:58158319-58158338 | Msa0128430:CDS | 20.0% |
| !! | TTGATAAAACGTTATTATGT+AGG | + | chr1_3:58158431-58158450 | Msa0128430:intron | 20.0% |
| !! | TGATAAAACGTTATTATGTA+GGG | + | chr1_3:58158432-58158451 | Msa0128430:intron | 20.0% |
| !!! | GATTCATATTTTTTATTACG+AGG | + | chr1_3:58159792-58159811 | Msa0128430:three_prime_UTR | 20.0% |
| ! | TGAATGAATATTTAAGGGTA+TGG | - | chr1_3:58156311-58156330 | None:intergenic | 25.0% |
| !! | AAGAAAAGAAAAAAGCACAA+TGG | + | chr1_3:58156488-58156507 | Msa0128430:exon | 25.0% |
| ! | GAAACTATGTGTTTAAAAAC+TGG | + | chr1_3:58156510-58156529 | Msa0128430:CDS | 25.0% |
| !! | GAAAACAATGATTTTTGTGA+AGG | - | chr1_3:58156627-58156646 | None:intergenic | 25.0% |
| !! | ATTTTCATTTAGATACCCAT+TGG | + | chr1_3:58156650-58156669 | Msa0128430:CDS | 25.0% |
| ! | TTCTCTATTATCTTCCAAAA+CGG | - | chr1_3:58156733-58156752 | None:intergenic | 25.0% |
| ! | CTTGATATTTGGTATAGAAT+AGG | - | chr1_3:58157066-58157085 | None:intergenic | 25.0% |
| ! | CTATTCTATACCAAATATCA+AGG | + | chr1_3:58157064-58157083 | Msa0128430:CDS | 25.0% |
| !!! | TTGTTTTTACTTGTGCTTTA+TGG | + | chr1_3:58157118-58157137 | Msa0128430:intron | 25.0% |
| !!! | TTTTAGTTGATTCTTAGAGA+TGG | + | chr1_3:58157180-58157199 | Msa0128430:intron | 25.0% |
| ! | GTTTGTAAATTGTTCATTCA+TGG | + | chr1_3:58157206-58157225 | Msa0128430:intron | 25.0% |
| ! | ATCTTCAACTAATCAATGTT+TGG | - | chr1_3:58157283-58157302 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAACAAATCA+AGG | - | chr1_3:58157307-58157326 | None:intergenic | 25.0% |
| !! | TTGTTTCTTTCTTTCTTTCT+TGG | + | chr1_3:58157311-58157330 | Msa0128430:intron | 25.0% |
| ! | TATGGATAGGTGTATTTATA+AGG | + | chr1_3:58157473-58157492 | Msa0128430:intron | 25.0% |
| !! | CTATAATCTGAATCTTTTGT+TGG | + | chr1_3:58157554-58157573 | Msa0128430:intron | 25.0% |
| !!! | TCCTATTATATGTTCTGAAA+TGG | + | chr1_3:58157782-58157801 | Msa0128430:intron | 25.0% |
| ! | TCCATTTCAGAACATATAAT+AGG | - | chr1_3:58157786-58157805 | None:intergenic | 25.0% |
| !! | TTAGTTTCATATGCATTTTG+TGG | - | chr1_3:58157832-58157851 | None:intergenic | 25.0% |
| ! | TGAAATTTGATTATTTAGCC+AGG | + | chr1_3:58157861-58157880 | Msa0128430:intron | 25.0% |
| ! | GAAATTTGATTATTTAGCCA+GGG | + | chr1_3:58157862-58157881 | Msa0128430:intron | 25.0% |
| !!! | AGATTTTTTGTTATTCAGGT+AGG | + | chr1_3:58158323-58158342 | Msa0128430:intron | 25.0% |
| !!! | GATTTTTTGTTATTCAGGTA+GGG | + | chr1_3:58158324-58158343 | Msa0128430:intron | 25.0% |
| !!! | ATTTTTTGTTATTCAGGTAG+GGG | + | chr1_3:58158325-58158344 | Msa0128430:intron | 25.0% |
| !! | ATTTAATTGGCTCAAAAAGT+AGG | - | chr1_3:58158488-58158507 | None:intergenic | 25.0% |
| !! | TTTTGAGCCAATTAAATTTG+AGG | + | chr1_3:58158491-58158510 | Msa0128430:CDS | 25.0% |
| ! | GCAATTACCTCAAATTTAAT+TGG | - | chr1_3:58158501-58158520 | None:intergenic | 25.0% |
| ! | CATTTCATATCATTCATCTA+AGG | - | chr1_3:58159773-58159792 | None:intergenic | 25.0% |
| !!! | ATATTTTTTATTACGAGGGA+GGG | + | chr1_3:58159797-58159816 | Msa0128430:three_prime_UTR | 25.0% |
| ! | AAAATTCGTTCACCTGTTTT+AGG | + | chr1_3:58156283-58156302 | Msa0128430:five_prime_UTR | 30.0% |
| ! | TTTTGCATGTGAAGAATGTT+TGG | + | chr1_3:58156817-58156836 | Msa0128430:CDS | 30.0% |
| ATGTGAAGAATGTTTGGAAA+GGG | + | chr1_3:58156823-58156842 | Msa0128430:CDS | 30.0% | |
| ! | ACTCATTTTCCAAAATGCTA+AGG | + | chr1_3:58156982-58157001 | Msa0128430:CDS | 30.0% |
| ! | ATTTTCCAAAATGCTAAGGA+GGG | + | chr1_3:58156986-58157005 | Msa0128430:CDS | 30.0% |
| ! | TTGTTCATTCATGGTTTTTG+AGG | + | chr1_3:58157215-58157234 | Msa0128430:intron | 30.0% |
| ATTTACCATGTGTTGGATTA+TGG | + | chr1_3:58157455-58157474 | Msa0128430:intron | 30.0% | |
| !!! | AAGGTTTTAATTCATAACCC+TGG | + | chr1_3:58157492-58157511 | Msa0128430:intron | 30.0% |
| !!! | AGGTTTTAATTCATAACCCT+GGG | + | chr1_3:58157493-58157512 | Msa0128430:intron | 30.0% |
| AAATGCTCATTGCTTATGTT+AGG | + | chr1_3:58157680-58157699 | Msa0128430:intron | 30.0% | |
| TATGTTAGGTGATTGATCTT+TGG | + | chr1_3:58157694-58157713 | Msa0128430:intron | 30.0% | |
| ! | GCATTTTTGCGATTGAAATT+TGG | + | chr1_3:58157731-58157750 | Msa0128430:intron | 30.0% |
| ! | ATTTTGTGGAAATCAGATTC+TGG | - | chr1_3:58157818-58157837 | None:intergenic | 30.0% |
| !!! | TAATGTTTTAAGAGTTTCCC+TGG | - | chr1_3:58157882-58157901 | None:intergenic | 30.0% |
| GGGAAACTCTTAAAACATTA+CGG | + | chr1_3:58157882-58157901 | Msa0128430:CDS | 30.0% | |
| ATCGCTAGAGAAAAAAGAAT+TGG | + | chr1_3:58157923-58157942 | Msa0128430:CDS | 30.0% | |
| AAAATCTGAGAAAATTCCTC+AGG | + | chr1_3:58157950-58157969 | Msa0128430:CDS | 30.0% | |
| ATCCTATATCCACCATTATT+TGG | - | chr1_3:58158014-58158033 | None:intergenic | 30.0% | |
| AAACGTTATTATGTAGGGTT+CGG | + | chr1_3:58158437-58158456 | Msa0128430:intron | 30.0% | |
| !!! | TGTACACATTTTTTTTACCC+AGG | + | chr1_3:58158617-58158636 | Msa0128430:intron | 30.0% |
| !!! | GTACACATTTTTTTTACCCA+GGG | + | chr1_3:58158618-58158637 | Msa0128430:intron | 30.0% |
| !!! | CCTTTAAGATTTTTGCAACA+TGG | - | chr1_3:58158992-58159011 | None:intergenic | 30.0% |
| CCATGTTGCAAAAATCTTAA+AGG | + | chr1_3:58158989-58159008 | Msa0128430:CDS | 30.0% | |
| TTACTTGGTTATTGAGACAT+GGG | - | chr1_3:58159040-58159059 | None:intergenic | 30.0% | |
| TTTACTTGGTTATTGAGACA+TGG | - | chr1_3:58159041-58159060 | None:intergenic | 30.0% | |
| ! | CAAAAACTTTTTGGATAAGC+AGG | - | chr1_3:58159074-58159093 | None:intergenic | 30.0% |
| CACAAATAAATGCATGTGTT+GGG | - | chr1_3:58159697-58159716 | None:intergenic | 30.0% | |
| ACACAAATAAATGCATGTGT+TGG | - | chr1_3:58159698-58159717 | None:intergenic | 30.0% | |
| !!! | CATATTTTTTATTACGAGGG+AGG | + | chr1_3:58159796-58159815 | Msa0128430:three_prime_UTR | 30.0% |
| ! | AGGGAAAAGTGTATAAAACA+AGG | + | chr1_3:58159816-58159835 | Msa0128430:three_prime_UTR | 30.0% |
| ! | GGGAAAAGTGTATAAAACAA+GGG | + | chr1_3:58159817-58159836 | Msa0128430:three_prime_UTR | 30.0% |
| AAGAATATTCCTCTACAAGT+AGG | - | chr1_3:58159915-58159934 | None:intergenic | 30.0% | |
| AAAACAAAACAACCTGCGTA+AGG | + | chr1_3:58156396-58156415 | Msa0128430:five_prime_UTR | 35.0% | |
| TGTATCTAAAGATCCACCAA+TGG | - | chr1_3:58156553-58156572 | None:intergenic | 35.0% | |
| AAAACCACCGTTATAGATGA+CGG | + | chr1_3:58156759-58156778 | Msa0128430:CDS | 35.0% | |
| CATGTGAAGAATGTTTGGAA+AGG | + | chr1_3:58156822-58156841 | Msa0128430:CDS | 35.0% | |
| TGTGAAGAATGTTTGGAAAG+GGG | + | chr1_3:58156824-58156843 | Msa0128430:CDS | 35.0% | |
| GCTGAGAATGATGAAAACAA+CGG | + | chr1_3:58156879-58156898 | Msa0128430:CDS | 35.0% | |
| ! | CATTTTCCAAAATGCTAAGG+AGG | + | chr1_3:58156985-58157004 | Msa0128430:CDS | 35.0% |
| ! | TCTTTCTTTCTTGGCTTGAA+TGG | + | chr1_3:58157320-58157339 | Msa0128430:intron | 35.0% |
| ! | CTTTCTTTCTTGGCTTGAAT+GGG | + | chr1_3:58157321-58157340 | Msa0128430:intron | 35.0% |
| ! | TTTCTTTCTTGGCTTGAATG+GGG | + | chr1_3:58157322-58157341 | Msa0128430:intron | 35.0% |
| ! | TGCATTTTGCCGTTATATCA+AGG | + | chr1_3:58157418-58157437 | Msa0128430:intron | 35.0% |
| AACCGCAAACCTTGATATAA+CGG | - | chr1_3:58157430-58157449 | None:intergenic | 35.0% | |
| !! | TTTTAATTCATAACCCTGGG+TGG | + | chr1_3:58157496-58157515 | Msa0128430:intron | 35.0% |
| TTTAATTCATAACCCTGGGT+GGG | + | chr1_3:58157497-58157516 | Msa0128430:intron | 35.0% | |
| CTTAAACTTGTCGAGACAAT+GGG | + | chr1_3:58157530-58157549 | Msa0128430:intron | 35.0% | |
| TTAAACTTGTCGAGACAATG+GGG | + | chr1_3:58157531-58157550 | Msa0128430:intron | 35.0% | |
| !! | AGCCAAATAATGGTGGATAT+AGG | + | chr1_3:58158009-58158028 | Msa0128430:CDS | 35.0% |
| TGGATATAGGATAAGTGCAA+CGG | + | chr1_3:58158022-58158041 | Msa0128430:CDS | 35.0% | |
| ATTCACTTCTTCAAATGCAG+CGG | + | chr1_3:58158109-58158128 | Msa0128430:CDS | 35.0% | |
| CAAAAAATCTTGTACCACTC+TGG | - | chr1_3:58158313-58158332 | None:intergenic | 35.0% | |
| TTGCTGATATTGCAGACTAT+AGG | + | chr1_3:58158517-58158536 | Msa0128430:intron | 35.0% | |
| ! | TTTTTCGTCACTATTGTCGA+AGG | + | chr1_3:58158541-58158560 | Msa0128430:intron | 35.0% |
| ! | TTTTCGTCACTATTGTCGAA+GGG | + | chr1_3:58158542-58158561 | Msa0128430:intron | 35.0% |
| !!! | CATTTTTTTTACCCAGGGTT+TGG | + | chr1_3:58158623-58158642 | Msa0128430:intron | 35.0% |
| GTATATATGAGGCTGCTAAA+GGG | + | chr1_3:58158664-58158683 | Msa0128430:CDS | 35.0% | |
| CTACTTCCTGTGATAACATT+TGG | + | chr1_3:58158840-58158859 | Msa0128430:CDS | 35.0% | |
| TAATTGCAAGAAAATGCTCG+CGG | - | chr1_3:58158963-58158982 | None:intergenic | 35.0% | |
| ! | AGATTTTTGCAACATGGTCA+GGG | - | chr1_3:58158986-58159005 | None:intergenic | 35.0% |
| ! | AAGATTTTTGCAACATGGTC+AGG | - | chr1_3:58158987-58159006 | None:intergenic | 35.0% |
| AAGCTACTATACACACCAAT+GGG | + | chr1_3:58159201-58159220 | Msa0128430:CDS | 35.0% | |
| CTTGGTGAAAATTTCTCATC+TGG | - | chr1_3:58159246-58159265 | None:intergenic | 35.0% | |
| TTTGTCAGAACCTAATGACA+CGG | + | chr1_3:58159314-58159333 | Msa0128430:CDS | 35.0% | |
| CTTAATATCTCAAGTGGATG+AGG | - | chr1_3:58159381-58159400 | None:intergenic | 35.0% | |
| CATGTCATGATCTCTTTGTA+TGG | - | chr1_3:58159433-58159452 | None:intergenic | 35.0% | |
| !!! | TTTTCTCTCGCATCGATTTA+CGG | - | chr1_3:58159509-58159528 | None:intergenic | 35.0% |
| ! | TTGATACCAGCATTGTTGTT+GGG | + | chr1_3:58159568-58159587 | Msa0128430:CDS | 35.0% |
| AGTCCTTAAAAAGGTTTAGC+AGG | + | chr1_3:58159661-58159680 | Msa0128430:CDS | 35.0% | |
| ! | AAGCCTGCTAAACCTTTTTA+AGG | - | chr1_3:58159667-58159686 | None:intergenic | 35.0% |
| CCAATATTAACATCCTAGCA+GGG | - | chr1_3:58159731-58159750 | None:intergenic | 35.0% | |
| CCTGCTAGGATGTTAATATT+GGG | + | chr1_3:58159729-58159748 | Msa0128430:CDS | 35.0% | |
| CTGCTAGGATGTTAATATTG+GGG | + | chr1_3:58159730-58159749 | Msa0128430:CDS | 35.0% | |
| TGCTAGGATGTTAATATTGG+GGG | + | chr1_3:58159731-58159750 | Msa0128430:CDS | 35.0% | |
| ! | AAGGGTATGGAACCTAAAAC+AGG | - | chr1_3:58156298-58156317 | None:intergenic | 40.0% |
| ! | ATGTTGTTGTTACCTTACGC+AGG | - | chr1_3:58156411-58156430 | None:intergenic | 40.0% |
| ATTGTTCCTTCGATCTCCAT+TGG | + | chr1_3:58156534-58156553 | Msa0128430:CDS | 40.0% | |
| GATACCCATTGGAATCTCTA+TGG | + | chr1_3:58156661-58156680 | Msa0128430:CDS | 40.0% | |
| ATCCTCACCGTCATCTATAA+CGG | - | chr1_3:58156769-58156788 | None:intergenic | 40.0% | |
| ! | TTATAGATGACGGTGAGGAT+GGG | + | chr1_3:58156769-58156788 | Msa0128430:CDS | 40.0% |
| AATGTTTGGAAAGGGGAACA+AGG | + | chr1_3:58156831-58156850 | Msa0128430:CDS | 40.0% | |
| ATGTTTGGAAAGGGGAACAA+GGG | + | chr1_3:58156832-58156851 | Msa0128430:CDS | 40.0% | |
| CAAGGGAATCATGAAAGAGA+AGG | + | chr1_3:58156849-58156868 | Msa0128430:CDS | 40.0% | |
| TCAAGTTTGTGATACTTGCG+CGG | + | chr1_3:58156911-58156930 | Msa0128430:CDS | 40.0% | |
| ! | AGAAACCCTCCTTAGCATTT+TGG | - | chr1_3:58156994-58157013 | None:intergenic | 40.0% |
| AATGCTAAGGAGGGTTTCTT+TGG | + | chr1_3:58156995-58157014 | Msa0128430:CDS | 40.0% | |
| TATGCTCAGATGTCACACTT+GGG | + | chr1_3:58157032-58157051 | Msa0128430:CDS | 40.0% | |
| TGCCGTTATATCAAGGTTTG+CGG | + | chr1_3:58157425-58157444 | Msa0128430:intron | 40.0% | |
| TTGCGCAATTTACCATGTGT+TGG | + | chr1_3:58157448-58157467 | Msa0128430:intron | 40.0% | |
| CCTATCCATAATCCAACACA+TGG | - | chr1_3:58157463-58157482 | None:intergenic | 40.0% | |
| CCATGTGTTGGATTATGGAT+AGG | + | chr1_3:58157460-58157479 | Msa0128430:intron | 40.0% | |
| GCTTAAACTTGTCGAGACAA+TGG | + | chr1_3:58157529-58157548 | Msa0128430:intron | 40.0% | |
| ! | GTTTTATCCAAAGCCAAACG+AGG | - | chr1_3:58157618-58157637 | None:intergenic | 40.0% |
| TAGGTGATTGATCTTTGGCT+TGG | + | chr1_3:58157699-58157718 | Msa0128430:intron | 40.0% | |
| ! | AGGTGATTGATCTTTGGCTT+GGG | + | chr1_3:58157700-58157719 | Msa0128430:intron | 40.0% |
| !! | TTGATCTTTGGCTTGGGATT+CGG | + | chr1_3:58157706-58157725 | Msa0128430:intron | 40.0% |
| TCTTTACTTTCGACTTCCTG+AGG | - | chr1_3:58157969-58157988 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAAGAAACCA+AGG | + | chr1_3:58157986-58158005 | Msa0128430:CDS | 40.0% | |
| GAAACCAAGGAGCCAAATAA+TGG | + | chr1_3:58157999-58158018 | Msa0128430:CDS | 40.0% | |
| GCTGCATTTGAAGAAGTGAA+TGG | - | chr1_3:58158110-58158129 | None:intergenic | 40.0% | |
| TTTCGTCACTATTGTCGAAG+GGG | + | chr1_3:58158543-58158562 | Msa0128430:intron | 40.0% | |
| CATATATACCTCTGTGCACA+AGG | - | chr1_3:58158653-58158672 | None:intergenic | 40.0% | |
| ! | TGTGCACAGAGGTATATATG+AGG | + | chr1_3:58158653-58158672 | Msa0128430:CDS | 40.0% |
| GGTATATATGAGGCTGCTAA+AGG | + | chr1_3:58158663-58158682 | Msa0128430:CDS | 40.0% | |
| TTTAGGTGAGCATGAACTTC+TGG | - | chr1_3:58158708-58158727 | None:intergenic | 40.0% | |
| TGTTATCACAGGAAGTAGAG+AGG | - | chr1_3:58158838-58158857 | None:intergenic | 40.0% | |
| GACACTCTACTTGAAAAGCT+TGG | + | chr1_3:58158888-58158907 | Msa0128430:CDS | 40.0% | |
| ! | TTTTTGGATAAGCAGGAGTG+CGG | - | chr1_3:58159067-58159086 | None:intergenic | 40.0% |
| GAAGCTACTATACACACCAA+TGG | + | chr1_3:58159200-58159219 | Msa0128430:intron | 40.0% | |
| AGAATCAGCAATTCACCCAT+TGG | - | chr1_3:58159219-58159238 | None:intergenic | 40.0% | |
| ! | GTGTCATTAGGTTCTGACAA+AGG | - | chr1_3:58159315-58159334 | None:intergenic | 40.0% |
| GTTCAAGAACGTCAACTTTG+CGG | - | chr1_3:58159355-58159374 | None:intergenic | 40.0% | |
| CGGTCACTTAATATCTCAAG+TGG | - | chr1_3:58159387-58159406 | None:intergenic | 40.0% | |
| TTAAGTGACCGATCTGCTTA+TGG | + | chr1_3:58159396-58159415 | Msa0128430:CDS | 40.0% | |
| TACGGATCTGGTTAAGTTCT+TGG | - | chr1_3:58159491-58159510 | None:intergenic | 40.0% | |
| GTTGATACCAGCATTGTTGT+TGG | + | chr1_3:58159567-58159586 | Msa0128430:CDS | 40.0% | |
| GTCTTCATTATGCCAGAGAA+CGG | - | chr1_3:58159633-58159652 | None:intergenic | 40.0% | |
| TTCTCTGGCATAATGAAGAC+AGG | + | chr1_3:58159633-58159652 | Msa0128430:CDS | 40.0% | |
| CAGGAAGAGAGTCCTTAAAA+AGG | + | chr1_3:58159652-58159671 | Msa0128430:CDS | 40.0% | |
| !!! | TGTTGCTTTTTTTCCCTGCT+AGG | + | chr1_3:58159715-58159734 | Msa0128430:CDS | 40.0% |
| CCCTGCTAGGATGTTAATAT+TGG | + | chr1_3:58159728-58159747 | Msa0128430:CDS | 40.0% | |
| CCCAATATTAACATCCTAGC+AGG | - | chr1_3:58159732-58159751 | None:intergenic | 40.0% | |
| ! | GTGTATAAAACAAGGGCACA+TGG | + | chr1_3:58159824-58159843 | Msa0128430:three_prime_UTR | 40.0% |
| ! | CACATGGTTAGCTGAATGTT+AGG | + | chr1_3:58159840-58159859 | Msa0128430:three_prime_UTR | 40.0% |
| CTCAAGAATCCTACTTGTAG+AGG | + | chr1_3:58159903-58159922 | Msa0128430:three_prime_UTR | 40.0% | |
| GTGGCCATAGAGATTCCAAT+GGG | - | chr1_3:58156668-58156687 | None:intergenic | 45.0% | |
| TGTGGCCATAGAGATTCCAA+TGG | - | chr1_3:58156669-58156688 | None:intergenic | 45.0% | |
| AATCTCTATGGCCACAACGA+CGG | + | chr1_3:58156673-58156692 | Msa0128430:CDS | 45.0% | |
| ! | GTTATAGATGACGGTGAGGA+TGG | + | chr1_3:58156768-58156787 | Msa0128430:CDS | 45.0% |
| GTATGCTCAGATGTCACACT+TGG | + | chr1_3:58157031-58157050 | Msa0128430:CDS | 45.0% | |
| ATGCTCAGATGTCACACTTG+GGG | + | chr1_3:58157033-58157052 | Msa0128430:CDS | 45.0% | |
| TTCGTGTCTTAGTCCTCGTT+TGG | + | chr1_3:58157602-58157621 | Msa0128430:intron | 45.0% | |
| ! | TCTTAGTCCTCGTTTGGCTT+TGG | + | chr1_3:58157608-58157627 | Msa0128430:intron | 45.0% |
| ACCAAGGAGCCAAATAATGG+TGG | + | chr1_3:58158002-58158021 | Msa0128430:CDS | 45.0% | |
| ! | TCCACCATTATTTGGCTCCT+TGG | - | chr1_3:58158006-58158025 | None:intergenic | 45.0% |
| CTTCTGCGTTCATCATGTCA+AGG | - | chr1_3:58158157-58158176 | None:intergenic | 45.0% | |
| TGACATGATGAACGCAGAAG+TGG | + | chr1_3:58158157-58158176 | Msa0128430:CDS | 45.0% | |
| !! | TACTGATTCAGTGACAGCAG+TGG | + | chr1_3:58158196-58158215 | Msa0128430:CDS | 45.0% |
| ATCTGCGATGATAACCAGAG+TGG | + | chr1_3:58158296-58158315 | Msa0128430:CDS | 45.0% | |
| GTTCGGAGTCATTAGCATCT+TGG | + | chr1_3:58158454-58158473 | Msa0128430:CDS | 45.0% | |
| TTCGTCACTATTGTCGAAGG+GGG | + | chr1_3:58158544-58158563 | Msa0128430:intron | 45.0% | |
| CATGCTCACCTAAAATCTCG+AGG | + | chr1_3:58158714-58158733 | Msa0128430:CDS | 45.0% | |
| ! | CACGAGAACCTCGAGATTTT+AGG | - | chr1_3:58158725-58158744 | None:intergenic | 45.0% |
| CAAGGGAATGTCCAGTGAAA+CGG | - | chr1_3:58158755-58158774 | None:intergenic | 45.0% | |
| ACAGGAAGTAGAGAGGTGAT+TGG | - | chr1_3:58158831-58158850 | None:intergenic | 45.0% | |
| GGGGAACCAAATGTTATCAC+AGG | - | chr1_3:58158849-58158868 | None:intergenic | 45.0% | |
| GCATTATAATTGCCTGCACG+TGG | - | chr1_3:58158926-58158945 | None:intergenic | 45.0% | |
| !! | TTTTGGATAAGCAGGAGTGC+GGG | - | chr1_3:58159066-58159085 | None:intergenic | 45.0% |
| AGATATAGACCACTGCCTTG+CGG | - | chr1_3:58159282-58159301 | None:intergenic | 45.0% | |
| ! | AGCTTCTTGTCCGTGTCATT+AGG | - | chr1_3:58159327-58159346 | None:intergenic | 45.0% |
| CTCCAGATCCATAAGCAGAT+CGG | - | chr1_3:58159407-58159426 | None:intergenic | 45.0% | |
| GAGAGAAAAGACGCAAGGTA+TGG | + | chr1_3:58159520-58159539 | Msa0128430:CDS | 45.0% | |
| AGAAAAGACGCAAGGTATGG+TGG | + | chr1_3:58159523-58159542 | Msa0128430:CDS | 45.0% | |
| ! | ATACCAGCATTGTTGTTGGG+AGG | + | chr1_3:58159571-58159590 | Msa0128430:CDS | 45.0% |
| !! | TCCATGGTATCGGTCAGTAT+CGG | + | chr1_3:58159594-58159613 | Msa0128430:CDS | 45.0% |
| GTTCCTTCGATCTCCATTGG+TGG | + | chr1_3:58156537-58156556 | Msa0128430:CDS | 50.0% | |
| GATCCACCAATGGAGATCGA+AGG | - | chr1_3:58156543-58156562 | None:intergenic | 50.0% | |
| AACGTTCTGTTCCGTCGTTG+TGG | - | chr1_3:58156687-58156706 | None:intergenic | 50.0% | |
| CTCACCGTCATCTATAACGG+TGG | - | chr1_3:58156766-58156785 | None:intergenic | 50.0% | |
| ! | CACCGTTATAGATGACGGTG+AGG | + | chr1_3:58156764-58156783 | Msa0128430:CDS | 50.0% |
| AGGATGGGCAGAGAGAGAAT+TGG | + | chr1_3:58156784-58156803 | Msa0128430:CDS | 50.0% | |
| GGATGGGCAGAGAGAGAATT+GGG | + | chr1_3:58156785-58156804 | Msa0128430:CDS | 50.0% | |
| GATGTCACACTTGGGGAGTT+TGG | + | chr1_3:58157040-58157059 | Msa0128430:CDS | 50.0% | |
| ! | CTTTCTTGGCTTGAATGGGG+TGG | + | chr1_3:58157325-58157344 | Msa0128430:intron | 50.0% |
| ATTCATAACCCTGGGTGGGT+AGG | + | chr1_3:58157501-58157520 | Msa0128430:intron | 50.0% | |
| GTGCAGATAAGATGCAGCAG+AGG | - | chr1_3:58158066-58158085 | None:intergenic | 50.0% | |
| ACTTCTTCAAATGCAGCGGC+TGG | + | chr1_3:58158113-58158132 | Msa0128430:CDS | 50.0% | |
| CGCAGAAGTGGCATCTTTGA+TGG | + | chr1_3:58158169-58158188 | Msa0128430:CDS | 50.0% | |
| TTCAGTGACAGCAGTGGTTG+CGG | + | chr1_3:58158202-58158221 | Msa0128430:CDS | 50.0% | |
| GGCAAAGGAGGAAGTAAAGC+AGG | + | chr1_3:58158223-58158242 | Msa0128430:CDS | 50.0% | |
| TCGCAGATGAACCATTCGCA+AGG | - | chr1_3:58158284-58158303 | None:intergenic | 50.0% | |
| TCGTCACTATTGTCGAAGGG+GGG | + | chr1_3:58158545-58158564 | Msa0128430:intron | 50.0% | |
| CACAAGGACATCCAAACCCT+GGG | - | chr1_3:58158637-58158656 | None:intergenic | 50.0% | |
| TTGGATGTCCTTGTGCACAG+AGG | + | chr1_3:58158642-58158661 | Msa0128430:CDS | 50.0% | |
| CGTGCAACTTTCCGTTTCAC+TGG | + | chr1_3:58158741-58158760 | Msa0128430:CDS | 50.0% | |
| CGTTTCACTGGACATTCCCT+TGG | + | chr1_3:58158753-58158772 | Msa0128430:CDS | 50.0% | |
| TTCACTGGACATTCCCTTGG+TGG | + | chr1_3:58158756-58158775 | Msa0128430:CDS | 50.0% | |
| ACATTCCCTTGGTGGAAGCT+TGG | + | chr1_3:58158764-58158783 | Msa0128430:CDS | 50.0% | |
| TAGTGCCAAGCTTCCACCAA+GGG | - | chr1_3:58158772-58158791 | None:intergenic | 50.0% | |
| TGCGGCAGAAGATTATGGCT+TGG | - | chr1_3:58159264-58159283 | None:intergenic | 50.0% | |
| AGCCATAATCTTCTGCCGCA+AGG | + | chr1_3:58159264-58159283 | Msa0128430:CDS | 50.0% | |
| TGCCTTGCGGCAGAAGATTA+TGG | - | chr1_3:58159269-58159288 | None:intergenic | 50.0% | |
| AGAACGTCAACTTTGCGGCT+CGG | - | chr1_3:58159350-58159369 | None:intergenic | 50.0% | |
| GACCGATCTGCTTATGGATC+TGG | + | chr1_3:58159402-58159421 | Msa0128430:CDS | 50.0% | |
| CGATCTGCTTATGGATCTGG+AGG | + | chr1_3:58159405-58159424 | Msa0128430:CDS | 50.0% | |
| !! | CTCGCATCGATTTACGGATC+TGG | - | chr1_3:58159503-58159522 | None:intergenic | 50.0% |
| GATGCGAGAGAAAAGACGCA+AGG | + | chr1_3:58159515-58159534 | Msa0128430:CDS | 50.0% | |
| ATGCTGGTATCAACTCGTCG+CGG | - | chr1_3:58159561-58159580 | None:intergenic | 50.0% | |
| ! | CATTGTTGTTGGGAGGTCCA+TGG | + | chr1_3:58159578-58159597 | Msa0128430:CDS | 50.0% |
| TGTTGGGAGGTCCATGGTAT+CGG | + | chr1_3:58159584-58159603 | Msa0128430:CDS | 50.0% | |
| TTATGCCAGAGAACGGTGAC+TGG | - | chr1_3:58159626-58159645 | None:intergenic | 50.0% | |
| CACCGCATCTACCGTAAGTG+CGG | + | chr1_3:58156587-58156606 | Msa0128430:CDS | 55.0% | |
| CACCGCACTTACGGTAGATG+CGG | - | chr1_3:58156592-58156611 | None:intergenic | 55.0% | |
| GCATCTACCGTAAGTGCGGT+GGG | + | chr1_3:58156591-58156610 | Msa0128430:CDS | 55.0% | |
| TTCACGACCCACCGCACTTA+CGG | - | chr1_3:58156601-58156620 | None:intergenic | 55.0% | |
| CGACGGAACAGAACGTTCAG+TGG | + | chr1_3:58156690-58156709 | Msa0128430:CDS | 55.0% | |
| AGCGAAAACCTACCCACCCA+GGG | - | chr1_3:58157512-58157531 | None:intergenic | 55.0% | |
| AAGCGAAAACCTACCCACCC+AGG | - | chr1_3:58157513-58157532 | None:intergenic | 55.0% | |
| TCAAATGCAGCGGCTGGTGA+AGG | + | chr1_3:58158119-58158138 | Msa0128430:CDS | 55.0% | |
| CTCGTTCGTCACCTTGCGAA+TGG | + | chr1_3:58158270-58158289 | Msa0128430:CDS | 55.0% | |
| GCACAAGGACATCCAAACCC+TGG | - | chr1_3:58158638-58158657 | None:intergenic | 55.0% | |
| GTAGTGCCAAGCTTCCACCA+AGG | - | chr1_3:58158773-58158792 | None:intergenic | 55.0% | |
| GGTTCCCCTTCCATCATGTG+TGG | + | chr1_3:58158861-58158880 | Msa0128430:CDS | 55.0% | |
| TCCCCTTCCATCATGTGTGG+AGG | + | chr1_3:58158864-58158883 | Msa0128430:CDS | 55.0% | |
| ! | GCCTCCACACATGATGGAAG+GGG | - | chr1_3:58158868-58158887 | None:intergenic | 55.0% |
| ! | CGCCTCCACACATGATGGAA+GGG | - | chr1_3:58158869-58158888 | None:intergenic | 55.0% |
| ! | TCGCCTCCACACATGATGGA+AGG | - | chr1_3:58158870-58158889 | None:intergenic | 55.0% |
| AGTGTCGCCTCCACACATGA+TGG | - | chr1_3:58158874-58158893 | None:intergenic | 55.0% | |
| ! | CAGGAGTGCGGGACTTTACT+TGG | - | chr1_3:58159055-58159074 | None:intergenic | 55.0% |
| AATCTTCTGCCGCAAGGCAG+TGG | + | chr1_3:58159270-58159289 | Msa0128430:CDS | 55.0% | |
| ACTCGTCGCGGTAGTACAAG+AGG | - | chr1_3:58159549-58159568 | None:intergenic | 55.0% | |
| GGACCTCCCAACAACAATGC+TGG | - | chr1_3:58159577-58159596 | None:intergenic | 55.0% | |
| GCCGATACTGACCGATACCA+TGG | - | chr1_3:58159598-58159617 | None:intergenic | 55.0% | |
| CGCACTTACGGTAGATGCGG+TGG | - | chr1_3:58156589-58156608 | None:intergenic | 60.0% | |
| CGCATCTACCGTAAGTGCGG+TGG | + | chr1_3:58156590-58156609 | Msa0128430:CDS | 60.0% | |
| ! | GTCTCTCGACGACGCCGTTT+TGG | + | chr1_3:58156716-58156735 | Msa0128430:CDS | 60.0% |
| GACAGCAGTGGTTGCGGCAA+AGG | + | chr1_3:58158208-58158227 | Msa0128430:CDS | 60.0% | |
| AGCAGTGGTTGCGGCAAAGG+AGG | + | chr1_3:58158211-58158230 | Msa0128430:CDS | 60.0% | |
| ATTGCCTGCACGTGGCTTCG+CGG | - | chr1_3:58158918-58158937 | None:intergenic | 60.0% | |
| CAGAGAACGGTGACTGGCGT+TGG | - | chr1_3:58159620-58159639 | None:intergenic | 60.0% | |
| CAACGCCAGTCACCGTTCTC+TGG | + | chr1_3:58159618-58159637 | Msa0128430:CDS | 60.0% | |
| CCTGCACGTGGCTTCGCGGC+AGG | - | chr1_3:58158914-58158933 | None:intergenic | 75.0% | |
| CCTGCCGCGAAGCCACGTGC+AGG | + | chr1_3:58158911-58158930 | Msa0128430:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 58156283 | 58159942 | 58156283 | ID=Msa0128430;Name=Msa0128430 |
| chr1_3 | mRNA | 58156283 | 58159942 | 58156283 | ID=Msa0128430-mRNA-1;Parent=Msa0128430;Name=Msa0128430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=224|1|1|1|1|1|5|163|698 |
| chr1_3 | exon | 58156283 | 58157085 | 58156283 | ID=Msa0128430-mRNA-1:exon:18630;Parent=Msa0128430-mRNA-1 |
| chr1_3 | exon | 58157879 | 58158340 | 58157879 | ID=Msa0128430-mRNA-1:exon:18631;Parent=Msa0128430-mRNA-1 |
| chr1_3 | exon | 58158453 | 58158512 | 58158453 | ID=Msa0128430-mRNA-1:exon:18632;Parent=Msa0128430-mRNA-1 |
| chr1_3 | exon | 58158639 | 58159055 | 58158639 | ID=Msa0128430-mRNA-1:exon:18633;Parent=Msa0128430-mRNA-1 |
| chr1_3 | exon | 58159201 | 58159942 | 58159201 | ID=Msa0128430-mRNA-1:exon:18634;Parent=Msa0128430-mRNA-1 |
| chr1_3 | five_prime_UTR | 58156283 | 58156506 | 58156283 | ID=Msa0128430-mRNA-1:five_prime_utr;Parent=Msa0128430-mRNA-1 |
| chr1_3 | CDS | 58156507 | 58157085 | 58156507 | ID=Msa0128430-mRNA-1:cds;Parent=Msa0128430-mRNA-1 |
| chr1_3 | CDS | 58157879 | 58158340 | 58157879 | ID=Msa0128430-mRNA-1:cds;Parent=Msa0128430-mRNA-1 |
| chr1_3 | CDS | 58158453 | 58158512 | 58158453 | ID=Msa0128430-mRNA-1:cds;Parent=Msa0128430-mRNA-1 |
| chr1_3 | CDS | 58158639 | 58159055 | 58158639 | ID=Msa0128430-mRNA-1:cds;Parent=Msa0128430-mRNA-1 |
| chr1_3 | CDS | 58159201 | 58159779 | 58159201 | ID=Msa0128430-mRNA-1:cds;Parent=Msa0128430-mRNA-1 |
| chr1_3 | three_prime_UTR | 58159780 | 58159942 | 58159780 | ID=Msa0128430-mRNA-1:three_prime_utr;Parent=Msa0128430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
