Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542470 | XP_003618299.1 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542470 | sp|Q0WUU6|PLT4_ARATH | 70.857 | 525 | 141 | 4 | 5 | 525 | 7 | 523 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542470 | G7KIS7 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0542470 | 0.806412 | 8.331807e-50 | -8.615850e-47 |
| Msa0012940 | Msa0542470 | 0.818545 | 1.853668e-52 | -8.615850e-47 |
| Msa0016540 | Msa0542470 | 0.804869 | 1.756424e-49 | -8.615850e-47 |
| Msa0033880 | Msa0542470 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0035130 | Msa0542470 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
| Msa0036540 | Msa0542470 | 0.806541 | 7.823997e-50 | -8.615850e-47 |
| Msa0041690 | Msa0542470 | 0.801306 | 9.584248e-49 | -8.615850e-47 |
| Msa0043500 | Msa0542470 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
| Msa0043650 | Msa0542470 | 0.808260 | 3.379490e-50 | -8.615850e-47 |
| Msa0047640 | Msa0542470 | 0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0057590 | Msa0542470 | 0.800085 | 1.700530e-48 | -8.615850e-47 |
| Msa0092410 | Msa0542470 | 0.813361 | 2.661167e-51 | -8.615850e-47 |
| Msa0105520 | Msa0542470 | 0.804670 | 1.932566e-49 | -8.615850e-47 |
| Msa0106620 | Msa0542470 | 0.840505 | 8.351842e-58 | -8.615850e-47 |
| Msa0106710 | Msa0542470 | 0.821681 | 3.547837e-53 | -8.615850e-47 |
| Msa0112270 | Msa0542470 | 0.844046 | 9.631973e-59 | -8.615850e-47 |
| Msa0116790 | Msa0542470 | 0.820147 | 7.997596e-53 | -8.615850e-47 |
| Msa0119440 | Msa0542470 | 0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa0127850 | Msa0542470 | 0.802361 | 5.818847e-49 | -8.615850e-47 |
| Msa0141400 | Msa0542470 | 0.809929 | 1.483931e-50 | -8.615850e-47 |
| Msa0146080 | Msa0542470 | 0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa0152560 | Msa0542470 | 0.804912 | 1.720392e-49 | -8.615850e-47 |
| Msa0171980 | Msa0542470 | 0.803803 | 2.928135e-49 | -8.615850e-47 |
| Msa0174000 | Msa0542470 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0187830 | Msa0542470 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0220730 | Msa0542470 | 0.806165 | 9.392911e-50 | -8.615850e-47 |
| Msa0223170 | Msa0542470 | 0.826331 | 2.876804e-54 | -8.615850e-47 |
| Msa0229920 | Msa0542470 | 0.832352 | 9.925717e-56 | -8.615850e-47 |
| Msa0384670 | Msa0542470 | 0.810614 | 1.055934e-50 | -8.615850e-47 |
| Msa0434570 | Msa0542470 | 0.808386 | 3.176854e-50 | -8.615850e-47 |
| Msa0434770 | Msa0542470 | 0.801933 | 7.127291e-49 | -8.615850e-47 |
| Msa0472770 | Msa0542470 | 0.800176 | 1.629803e-48 | -8.615850e-47 |
| Msa0478580 | Msa0542470 | 0.800227 | 1.590990e-48 | -8.615850e-47 |
| Msa0241830 | Msa0542470 | 0.812214 | 4.745571e-51 | -8.615850e-47 |
| Msa0244970 | Msa0542470 | 0.802243 | 6.154775e-49 | -8.615850e-47 |
| Msa0244980 | Msa0542470 | 0.800414 | 1.457619e-48 | -8.615850e-47 |
| Msa0261170 | Msa0542470 | 0.814050 | 1.876709e-51 | -8.615850e-47 |
| Msa0269560 | Msa0542470 | 0.804261 | 2.351026e-49 | -8.615850e-47 |
| Msa0270210 | Msa0542470 | 0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0279850 | Msa0542470 | 0.818857 | 1.574482e-52 | -8.615850e-47 |
| Msa0317970 | Msa0542470 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0321690 | Msa0542470 | 0.808090 | 3.673434e-50 | -8.615850e-47 |
| Msa0322900 | Msa0542470 | 0.841279 | 5.230947e-58 | -8.615850e-47 |
| Msa0346990 | Msa0542470 | 0.805090 | 1.578439e-49 | -8.615850e-47 |
| Msa0482940 | Msa0542470 | 0.814930 | 1.198543e-51 | -8.615850e-47 |
| Msa0485240 | Msa0542470 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa0514610 | Msa0542470 | 0.820008 | 8.603468e-53 | -8.615850e-47 |
| Msa0518030 | Msa0542470 | 0.833642 | 4.742712e-56 | -8.615850e-47 |
| Msa0531250 | Msa0542470 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0534400 | Msa0542470 | 0.810449 | 1.146246e-50 | -8.615850e-47 |
| Msa0542470 | Msa0547990 | 0.802040 | 6.775212e-49 | -8.615850e-47 |
| Msa0542470 | Msa0556010 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0542470 | Msa0569780 | 0.816552 | 5.215631e-52 | -8.615850e-47 |
| Msa0542470 | Msa0572750 | 0.805006 | 1.644114e-49 | -8.615850e-47 |
| Msa0542470 | Msa0581690 | 0.813891 | 2.034186e-51 | -8.615850e-47 |
| Msa0542470 | Msa0581970 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0542470 | Msa0583500 | 0.801497 | 8.756797e-49 | -8.615850e-47 |
| Msa0542470 | Msa0590640 | 0.814495 | 1.496855e-51 | -8.615850e-47 |
| Msa0542470 | Msa0597770 | 0.817684 | 2.902070e-52 | -8.615850e-47 |
| Msa0542470 | Msa0598520 | 0.971240 | 7.462329e-133 | -8.615850e-47 |
| Msa0542470 | Msa0616450 | 0.809970 | 1.454396e-50 | -8.615850e-47 |
| Msa0542470 | Msa0619420 | 0.833983 | 3.897055e-56 | -8.615850e-47 |
| Msa0542470 | Msa0630940 | 0.834611 | 2.712366e-56 | -8.615850e-47 |
| Msa0542470 | Msa0644030 | 0.801301 | 9.607035e-49 | -8.615850e-47 |
| Msa0542470 | Msa0644800 | 0.809408 | 1.920532e-50 | -8.615850e-47 |
| Msa0542470 | Msa0659550 | 0.813530 | 2.442968e-51 | -8.615850e-47 |
| Msa0542470 | Msa0659790 | 0.826290 | 2.941622e-54 | -8.615850e-47 |
| Msa0542470 | Msa0662940 | 0.959689 | 1.017700e-117 | -8.615850e-47 |
| Msa0542470 | Msa0664540 | 0.803263 | 3.789881e-49 | -8.615850e-47 |
| Msa0542470 | Msa0669180 | 0.832152 | 1.112547e-55 | -8.615850e-47 |
| Msa0542470 | Msa0687870 | 0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0542470 | Msa0692880 | 0.824472 | 7.924199e-54 | -8.615850e-47 |
| Msa0542470 | Msa0698100 | 0.810427 | 1.159237e-50 | -8.615850e-47 |
| Msa0542470 | Msa0744100 | 0.810789 | 9.677901e-51 | -8.615850e-47 |
| Msa0542470 | Msa0750250 | 0.821394 | 4.132974e-53 | -8.615850e-47 |
| Msa0542470 | Msa0754930 | 0.801503 | 8.733119e-49 | -8.615850e-47 |
| Msa0542470 | Msa0770090 | -0.804588 | 2.010342e-49 | -8.615850e-47 |
| Msa0542470 | Msa0779260 | 0.809943 | 1.474065e-50 | -8.615850e-47 |
| Msa0542470 | Msa0825270 | 0.811522 | 6.711944e-51 | -8.615850e-47 |
| Msa0542470 | Msa0849110 | -0.809353 | 1.972850e-50 | -8.615850e-47 |
| Msa0542470 | Msa0849440 | 0.805121 | 1.555765e-49 | -8.615850e-47 |
| Msa0542470 | Msa0864420 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0542470 | Msa0870650 | 0.808176 | 3.522995e-50 | -8.615850e-47 |
| Msa0542470 | Msa0903780 | 0.819895 | 9.134527e-53 | -8.615850e-47 |
| Msa0542470 | Msa0934140 | 0.808079 | 3.693859e-50 | -8.615850e-47 |
| Msa0542470 | Msa1003340 | 0.841582 | 4.355504e-58 | -8.615850e-47 |
| Msa0542470 | Msa1030080 | 0.811521 | 6.715748e-51 | -8.615850e-47 |
| Msa0542470 | Msa1034700 | 0.802498 | 5.451943e-49 | -8.615850e-47 |
| Msa0542470 | Msa1043330 | 0.976823 | 1.435835e-142 | -8.615850e-47 |
| Msa0542470 | Msa1046440 | 0.841947 | 3.488500e-58 | -8.615850e-47 |
| Msa0542470 | Msa1070390 | 0.816558 | 5.199338e-52 | -8.615850e-47 |
| Msa0542470 | Msa1089450 | 0.803133 | 4.031553e-49 | -8.615850e-47 |
| Msa0542470 | Msa1108720 | 0.801023 | 1.094953e-48 | -8.615850e-47 |
| Msa0542470 | Msa1123350 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0542470 | Msa1127540 | 0.807364 | 5.240451e-50 | -8.615850e-47 |
| Msa0542470 | Msa1127590 | 0.821213 | 4.551282e-53 | -8.615850e-47 |
| Msa0542470 | Msa1133540 | 0.802609 | 5.172481e-49 | -8.615850e-47 |
| Msa0542470 | Msa1158230 | 0.828768 | 7.482049e-55 | -8.615850e-47 |
| Msa0542470 | Msa1162080 | 0.817036 | 4.060535e-52 | -8.615850e-47 |
| Msa0542470 | Msa1163880 | 0.821373 | 4.180460e-53 | -8.615850e-47 |
| Msa0542470 | Msa1169080 | 0.811405 | 7.116909e-51 | -8.615850e-47 |
| Msa0542470 | Msa1220000 | 0.804531 | 2.065816e-49 | -8.615850e-47 |
| Msa0542470 | Msa1262010 | 0.806298 | 8.803738e-50 | -8.615850e-47 |
| Msa0542470 | Msa1262890 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
| Msa0542470 | Msa1266330 | 0.828298 | 9.715908e-55 | -8.615850e-47 |
| Msa0542470 | Msa1276970 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa0542470 | Msa1277080 | 0.806253 | 8.999821e-50 | -8.615850e-47 |
| Msa0542470 | Msa1334400 | 0.816944 | 4.258268e-52 | -8.615850e-47 |
| Msa0542470 | Msa1335160 | 0.803923 | 2.765250e-49 | -8.615850e-47 |
| Msa0542470 | Msa1344310 | 0.815163 | 1.063991e-51 | -8.615850e-47 |
| Msa0542470 | Msa1366550 | 0.804229 | 2.388226e-49 | -8.615850e-47 |
| Msa0542470 | Msa1370590 | 0.814942 | 1.191624e-51 | -8.615850e-47 |
| Msa0542470 | Msa1372280 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
| Msa0542470 | Msa1373170 | 0.822433 | 2.375217e-53 | -8.615850e-47 |
| Msa0542470 | Msa1381480 | 0.800851 | 1.187181e-48 | -8.615850e-47 |
| Msa0542470 | Msa1384100 | 0.814381 | 1.585791e-51 | -8.615850e-47 |
| Msa0542470 | Msa1395730 | 0.814476 | 1.511328e-51 | -8.615850e-47 |
| Msa0542470 | Msa1410420 | 0.818374 | 2.026380e-52 | -8.615850e-47 |
| Msa0542470 | Msa1418240 | 0.801730 | 7.844428e-49 | -8.615850e-47 |
| Msa0542470 | Msa1421900 | 0.805558 | 1.259631e-49 | -8.615850e-47 |
| Msa0542470 | Msa1424630 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0542470 | Msa1427160 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
| Msa0542470 | Msa1430550 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa0542470 | Msa1432130 | 0.801664 | 8.090939e-49 | -8.615850e-47 |
| Msa0542470 | Msa1444120 | 0.819626 | 1.052393e-52 | -8.615850e-47 |
| Msa0542470 | Msa1447180 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0542470 | Msa1454530 | 0.809477 | 1.855741e-50 | -8.615850e-47 |
| Msa0542470 | Msa1461540 | 0.803465 | 3.442148e-49 | -8.615850e-47 |
| Msa0542470 | Msa1462470 | 0.824112 | 9.627882e-54 | -8.615850e-47 |
| Msa0542470 | Msa1463030 | 0.803445 | 3.473741e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542470 | MtrunA17_Chr4g0021771 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1061 |
| Msa0542470 | MtrunA17_Chr2g0282031 | 66.027 | 521 | 172 | 1 | 4 | 524 | 7 | 522 | 0.0 | 700 |
| Msa0542470 | MtrunA17_Chr4g0034681 | 47.929 | 507 | 243 | 6 | 41 | 527 | 12 | 517 | 2.28e-165 | 479 |
| Msa0542470 | MtrunA17_Chr3g0144361 | 49.896 | 481 | 221 | 4 | 42 | 502 | 11 | 491 | 3.07e-165 | 478 |
| Msa0542470 | MtrunA17_Chr6g0485661 | 47.660 | 470 | 241 | 2 | 30 | 494 | 33 | 502 | 2.21e-162 | 471 |
| Msa0542470 | MtrunA17_Chr4g0036021 | 47.162 | 511 | 248 | 6 | 36 | 529 | 13 | 518 | 1.18e-161 | 469 |
| Msa0542470 | MtrunA17_Chr8g0390521 | 46.996 | 466 | 239 | 5 | 45 | 502 | 6 | 471 | 2.56e-151 | 442 |
| Msa0542470 | MtrunA17_Chr8g0373531 | 44.400 | 500 | 262 | 5 | 38 | 521 | 2 | 501 | 4.45e-149 | 437 |
| Msa0542470 | MtrunA17_Chr5g0432581 | 45.122 | 492 | 251 | 6 | 41 | 515 | 5 | 494 | 8.76e-146 | 428 |
| Msa0542470 | MtrunA17_Chr5g0403831 | 38.494 | 478 | 277 | 3 | 49 | 509 | 25 | 502 | 2.12e-112 | 343 |
| Msa0542470 | MtrunA17_Chr7g0250881 | 34.221 | 488 | 296 | 10 | 18 | 499 | 31 | 499 | 1.24e-73 | 242 |
| Msa0542470 | MtrunA17_Chr1g0213611 | 32.900 | 462 | 293 | 5 | 54 | 505 | 77 | 531 | 3.76e-73 | 242 |
| Msa0542470 | MtrunA17_Chr6g0457781 | 33.874 | 493 | 303 | 10 | 18 | 505 | 71 | 545 | 6.96e-72 | 239 |
| Msa0542470 | MtrunA17_Chr1g0213631 | 34.694 | 441 | 270 | 5 | 74 | 505 | 4 | 435 | 8.52e-72 | 236 |
| Msa0542470 | MtrunA17_Chr7g0214451 | 32.484 | 471 | 297 | 8 | 46 | 505 | 22 | 482 | 7.10e-71 | 235 |
| Msa0542470 | MtrunA17_Chr4g0032021 | 32.017 | 481 | 286 | 9 | 45 | 499 | 86 | 551 | 9.90e-69 | 231 |
| Msa0542470 | MtrunA17_Chr4g0039651 | 28.994 | 507 | 318 | 12 | 17 | 499 | 9 | 497 | 5.18e-66 | 222 |
| Msa0542470 | MtrunA17_Chr8g0373181 | 32.237 | 456 | 278 | 9 | 55 | 499 | 47 | 482 | 3.56e-64 | 217 |
| Msa0542470 | MtrunA17_Chr7g0273281 | 31.062 | 499 | 286 | 12 | 28 | 500 | 27 | 493 | 4.01e-64 | 217 |
| Msa0542470 | MtrunA17_Chr1g0155221 | 30.258 | 466 | 283 | 8 | 55 | 503 | 49 | 489 | 1.49e-59 | 204 |
| Msa0542470 | MtrunA17_Chr7g0259471 | 29.630 | 486 | 311 | 11 | 21 | 499 | 9 | 470 | 4.01e-58 | 200 |
| Msa0542470 | MtrunA17_Chr4g0066581 | 30.738 | 488 | 315 | 8 | 19 | 499 | 12 | 483 | 6.25e-58 | 200 |
| Msa0542470 | MtrunA17_Chr2g0286721 | 29.857 | 489 | 315 | 9 | 19 | 499 | 12 | 480 | 1.46e-56 | 196 |
| Msa0542470 | MtrunA17_Chr7g0259221 | 29.498 | 478 | 300 | 11 | 28 | 499 | 26 | 472 | 2.65e-55 | 193 |
| Msa0542470 | MtrunA17_Chr8g0373191 | 28.571 | 504 | 296 | 11 | 16 | 502 | 1 | 457 | 3.85e-54 | 189 |
| Msa0542470 | MtrunA17_Chr1g0205671 | 27.049 | 488 | 317 | 8 | 55 | 514 | 23 | 499 | 5.21e-52 | 184 |
| Msa0542470 | MtrunA17_Chr2g0290181 | 32.791 | 369 | 221 | 7 | 42 | 391 | 6 | 366 | 2.83e-51 | 184 |
| Msa0542470 | MtrunA17_Chr2g0290181 | 41.304 | 92 | 54 | 0 | 413 | 504 | 467 | 558 | 1.49e-14 | 76.3 |
| Msa0542470 | MtrunA17_Chr1g0205681 | 27.835 | 485 | 309 | 9 | 51 | 506 | 20 | 492 | 4.74e-51 | 182 |
| Msa0542470 | MtrunA17_Chr3g0115781 | 26.349 | 482 | 309 | 12 | 55 | 505 | 26 | 492 | 6.48e-51 | 182 |
| Msa0542470 | MtrunA17_Chr2g0303731 | 34.320 | 338 | 214 | 5 | 54 | 387 | 25 | 358 | 7.09e-51 | 183 |
| Msa0542470 | MtrunA17_Chr2g0303731 | 43.750 | 96 | 54 | 0 | 410 | 505 | 461 | 556 | 3.96e-17 | 84.7 |
| Msa0542470 | MtrunA17_Chr5g0420841 | 28.257 | 499 | 312 | 12 | 51 | 517 | 18 | 502 | 1.32e-50 | 181 |
| Msa0542470 | MtrunA17_Chr3g0078971 | 25.996 | 477 | 318 | 10 | 55 | 506 | 24 | 490 | 1.78e-50 | 181 |
| Msa0542470 | MtrunA17_Chr5g0394341 | 26.747 | 501 | 320 | 12 | 55 | 524 | 23 | 507 | 2.24e-50 | 181 |
| Msa0542470 | MtrunA17_Chr8g0390141 | 27.381 | 504 | 321 | 12 | 47 | 520 | 19 | 507 | 2.33e-50 | 180 |
| Msa0542470 | MtrunA17_Chr3g0119401 | 29.268 | 492 | 319 | 13 | 21 | 499 | 54 | 529 | 1.22e-49 | 179 |
| Msa0542470 | MtrunA17_Chr3g0115721 | 27.108 | 498 | 321 | 12 | 51 | 520 | 20 | 503 | 3.41e-49 | 177 |
| Msa0542470 | MtrunA17_Chr6g0486681 | 27.615 | 478 | 310 | 12 | 54 | 505 | 25 | 492 | 2.40e-48 | 175 |
| Msa0542470 | MtrunA17_Chr6g0486671 | 27.615 | 478 | 310 | 12 | 54 | 505 | 25 | 492 | 2.40e-48 | 175 |
| Msa0542470 | MtrunA17_Chr4g0065311 | 26.347 | 501 | 321 | 11 | 36 | 505 | 2 | 485 | 2.73e-48 | 174 |
| Msa0542470 | MtrunA17_Chr5g0417611 | 26.653 | 484 | 316 | 11 | 51 | 505 | 20 | 493 | 6.03e-48 | 174 |
| Msa0542470 | MtrunA17_Chr3g0085971 | 27.668 | 506 | 324 | 11 | 51 | 526 | 18 | 511 | 1.59e-47 | 172 |
| Msa0542470 | MtrunA17_Chr1g0205691 | 26.166 | 493 | 314 | 10 | 62 | 520 | 29 | 505 | 2.67e-47 | 172 |
| Msa0542470 | MtrunA17_Chr3g0115711 | 27.801 | 482 | 311 | 11 | 43 | 498 | 12 | 482 | 1.21e-46 | 170 |
| Msa0542470 | MtrunA17_Chr8g0390261 | 27.160 | 486 | 302 | 13 | 54 | 505 | 25 | 492 | 1.27e-46 | 170 |
| Msa0542470 | MtrunA17_Chr8g0376631 | 33.951 | 324 | 204 | 7 | 54 | 372 | 25 | 343 | 2.22e-46 | 171 |
| Msa0542470 | MtrunA17_Chr8g0376631 | 45.833 | 96 | 52 | 0 | 410 | 505 | 460 | 555 | 1.67e-17 | 85.9 |
| Msa0542470 | MtrunA17_Chr4g0048411 | 27.397 | 511 | 319 | 12 | 45 | 516 | 14 | 511 | 8.26e-46 | 168 |
| Msa0542470 | MtrunA17_Chr4g0048051 | 27.545 | 501 | 314 | 12 | 54 | 516 | 22 | 511 | 9.08e-46 | 167 |
| Msa0542470 | MtrunA17_Chr1g0164851 | 27.066 | 484 | 306 | 11 | 54 | 505 | 22 | 490 | 2.15e-45 | 167 |
| Msa0542470 | MtrunA17_Chr1g0164871 | 26.860 | 484 | 307 | 11 | 54 | 505 | 22 | 490 | 2.50e-45 | 166 |
| Msa0542470 | MtrunA17_Chr4g0065324 | 26.166 | 493 | 314 | 11 | 45 | 505 | 19 | 493 | 4.19e-45 | 166 |
| Msa0542470 | MtrunA17_Chr2g0303701 | 33.429 | 350 | 221 | 6 | 54 | 398 | 25 | 367 | 6.79e-45 | 166 |
| Msa0542470 | MtrunA17_Chr3g0115741 | 25.413 | 484 | 319 | 12 | 51 | 505 | 23 | 493 | 1.63e-44 | 164 |
| Msa0542470 | MtrunA17_Chr3g0121674 | 33.115 | 305 | 189 | 5 | 216 | 514 | 1 | 296 | 3.57e-44 | 158 |
| Msa0542470 | MtrunA17_Chr8g0376601 | 33.041 | 342 | 216 | 8 | 46 | 382 | 20 | 353 | 8.01e-44 | 163 |
| Msa0542470 | MtrunA17_Chr8g0376601 | 45.783 | 83 | 45 | 0 | 410 | 492 | 459 | 541 | 8.22e-13 | 70.9 |
| Msa0542470 | MtrunA17_Chr3g0128171 | 26.253 | 419 | 291 | 8 | 101 | 511 | 42 | 450 | 1.83e-43 | 160 |
| Msa0542470 | MtrunA17_Chr3g0078991 | 25.306 | 490 | 329 | 11 | 45 | 506 | 11 | 491 | 1.89e-43 | 161 |
| Msa0542470 | MtrunA17_Chr4g0004821 | 28.958 | 480 | 303 | 11 | 33 | 500 | 17 | 470 | 3.67e-43 | 160 |
| Msa0542470 | MtrunA17_Chr3g0115751 | 25.572 | 481 | 316 | 12 | 51 | 502 | 25 | 492 | 4.39e-43 | 160 |
| Msa0542470 | MtrunA17_Chr6g0486021 | 29.400 | 500 | 303 | 15 | 24 | 500 | 12 | 484 | 5.59e-42 | 157 |
| Msa0542470 | MtrunA17_Chr5g0445601 | 24.138 | 493 | 336 | 9 | 39 | 505 | 11 | 491 | 1.27e-41 | 156 |
| Msa0542470 | MtrunA17_Chr3g0078791 | 26.442 | 416 | 263 | 7 | 101 | 505 | 34 | 417 | 5.96e-41 | 153 |
| Msa0542470 | MtrunA17_Chr3g0128081 | 25.261 | 479 | 308 | 10 | 62 | 505 | 29 | 492 | 3.18e-40 | 152 |
| Msa0542470 | MtrunA17_Chr8g0376611 | 33.212 | 274 | 178 | 4 | 105 | 377 | 12 | 281 | 5.39e-40 | 151 |
| Msa0542470 | MtrunA17_Chr8g0376611 | 41.667 | 96 | 56 | 0 | 410 | 505 | 391 | 486 | 1.85e-16 | 82.0 |
| Msa0542470 | MtrunA17_Chr7g0257631 | 24.089 | 494 | 337 | 9 | 38 | 505 | 44 | 525 | 6.42e-39 | 149 |
| Msa0542470 | MtrunA17_Chr5g0437021 | 25.407 | 492 | 325 | 11 | 42 | 505 | 13 | 490 | 8.53e-38 | 145 |
| Msa0542470 | MtrunA17_Chr2g0290161 | 32.632 | 285 | 154 | 5 | 112 | 390 | 20 | 272 | 9.44e-36 | 139 |
| Msa0542470 | MtrunA17_Chr7g0273261 | 34.821 | 224 | 126 | 6 | 301 | 516 | 40 | 251 | 9.05e-33 | 125 |
| Msa0542470 | MtrunA17_Chr3g0144261 | 33.333 | 234 | 153 | 3 | 53 | 285 | 2 | 233 | 1.17e-32 | 132 |
| Msa0542470 | MtrunA17_Chr3g0144261 | 31.200 | 250 | 156 | 7 | 265 | 502 | 472 | 717 | 1.23e-21 | 99.0 |
| Msa0542470 | MtrunA17_Chr3g0115731 | 24.165 | 509 | 310 | 14 | 49 | 522 | 18 | 485 | 4.68e-32 | 129 |
| Msa0542470 | MtrunA17_Chr5g0407441 | 33.197 | 244 | 154 | 7 | 55 | 295 | 4 | 241 | 4.31e-30 | 125 |
| Msa0542470 | MtrunA17_Chr5g0407441 | 31.687 | 243 | 151 | 7 | 287 | 517 | 487 | 726 | 2.89e-19 | 91.7 |
| Msa0542470 | MtrunA17_Chr4g0065351 | 25.278 | 360 | 248 | 9 | 173 | 525 | 1 | 346 | 9.00e-29 | 117 |
| Msa0542470 | MtrunA17_Chr8g0370141 | 33.047 | 233 | 150 | 5 | 53 | 280 | 2 | 233 | 1.50e-28 | 117 |
| Msa0542470 | MtrunA17_Chr5g0404191 | 26.357 | 258 | 178 | 3 | 17 | 274 | 17 | 262 | 6.28e-28 | 113 |
| Msa0542470 | MtrunA17_Chr3g0146061 | 33.645 | 214 | 127 | 5 | 66 | 276 | 15 | 216 | 3.26e-27 | 116 |
| Msa0542470 | MtrunA17_Chr3g0146061 | 34.071 | 226 | 136 | 5 | 287 | 502 | 505 | 727 | 1.51e-23 | 105 |
| Msa0542470 | MtrunA17_Chr5g0419321 | 32.432 | 222 | 141 | 6 | 77 | 295 | 54 | 269 | 1.49e-25 | 111 |
| Msa0542470 | MtrunA17_Chr5g0419321 | 29.057 | 265 | 169 | 7 | 254 | 502 | 474 | 735 | 2.37e-19 | 92.0 |
| Msa0542470 | MtrunA17_Chr7g0273271 | 27.477 | 222 | 143 | 3 | 21 | 241 | 2 | 206 | 1.56e-20 | 90.1 |
| Msa0542470 | MtrunA17_Chr5g0434231 | 33.516 | 182 | 85 | 4 | 97 | 272 | 1 | 152 | 1.65e-20 | 88.2 |
| Msa0542470 | MtrunA17_Chr5g0404181 | 36.567 | 134 | 75 | 4 | 378 | 503 | 1 | 132 | 9.78e-18 | 79.7 |
| Msa0542470 | MtrunA17_Chr5g0434251 | 39.583 | 96 | 58 | 0 | 410 | 505 | 47 | 142 | 4.26e-17 | 78.6 |
| Msa0542470 | MtrunA17_Chr1g0186831 | 24.766 | 428 | 278 | 13 | 105 | 495 | 80 | 500 | 1.79e-16 | 82.4 |
| Msa0542470 | MtrunA17_Chr8g0370151 | 26.906 | 223 | 152 | 2 | 289 | 502 | 128 | 348 | 6.55e-15 | 76.3 |
| Msa0542470 | MtrunA17_Chr4g0042131 | 25.481 | 416 | 245 | 21 | 102 | 495 | 35 | 407 | 7.45e-13 | 70.5 |
| Msa0542470 | MtrunA17_Chr5g0434261 | 45.783 | 83 | 45 | 0 | 410 | 492 | 221 | 303 | 8.11e-13 | 69.7 |
| Msa0542470 | MtrunA17_Chr3g0120761 | 23.928 | 443 | 279 | 14 | 104 | 495 | 76 | 511 | 9.71e-13 | 70.5 |
| Msa0542470 | MtrunA17_Chr1g0183921 | 23.146 | 445 | 291 | 14 | 99 | 499 | 75 | 512 | 1.74e-12 | 69.7 |
| Msa0542470 | MtrunA17_Chr5g0446681 | 29.936 | 157 | 93 | 3 | 38 | 194 | 6 | 145 | 3.40e-12 | 67.4 |
| Msa0542470 | MtrunA17_Chr4g0000061 | 25.170 | 441 | 249 | 19 | 106 | 497 | 80 | 488 | 6.16e-12 | 67.8 |
| Msa0542470 | MtrunA17_Chr1g0186821 | 24.094 | 469 | 294 | 16 | 104 | 519 | 75 | 534 | 3.07e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542470 | AT2G20780.1 | 70.857 | 525 | 141 | 4 | 5 | 525 | 7 | 523 | 0.0 | 751 |
| Msa0542470 | AT2G20780.2 | 73.756 | 442 | 114 | 1 | 84 | 525 | 26 | 465 | 0.0 | 669 |
| Msa0542470 | AT3G18830.1 | 48.178 | 494 | 236 | 5 | 47 | 524 | 31 | 520 | 1.27e-161 | 470 |
| Msa0542470 | AT2G16120.1 | 47.368 | 494 | 239 | 4 | 45 | 517 | 16 | 509 | 3.11e-157 | 458 |
| Msa0542470 | AT2G16130.1 | 47.358 | 492 | 236 | 4 | 45 | 513 | 16 | 507 | 3.78e-156 | 455 |
| Msa0542470 | AT4G36670.1 | 46.737 | 475 | 238 | 4 | 46 | 505 | 8 | 482 | 3.60e-151 | 442 |
| Msa0542470 | AT2G18480.1 | 47.379 | 477 | 237 | 4 | 40 | 502 | 7 | 483 | 2.52e-149 | 438 |
| Msa0542470 | AT2G43330.1 | 32.406 | 503 | 316 | 9 | 37 | 526 | 16 | 507 | 3.01e-71 | 236 |
| Msa0542470 | AT5G17010.1 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa0542470 | AT5G17010.3 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa0542470 | AT5G17010.4 | 29.423 | 503 | 313 | 9 | 21 | 499 | 15 | 499 | 6.48e-69 | 230 |
| Msa0542470 | AT5G16150.2 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa0542470 | AT5G16150.1 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa0542470 | AT5G16150.3 | 33.608 | 485 | 296 | 11 | 23 | 500 | 75 | 540 | 3.37e-67 | 226 |
| Msa0542470 | AT1G75220.1 | 30.785 | 497 | 308 | 10 | 17 | 503 | 17 | 487 | 2.11e-65 | 220 |
| Msa0542470 | AT3G05150.1 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.83e-63 | 214 |
| Msa0542470 | AT3G05150.3 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 1.83e-63 | 214 |
| Msa0542470 | AT3G05150.2 | 30.738 | 488 | 307 | 9 | 21 | 501 | 5 | 468 | 2.29e-63 | 215 |
| Msa0542470 | AT1G19450.1 | 30.233 | 516 | 319 | 13 | 1 | 503 | 1 | 488 | 2.34e-63 | 215 |
| Msa0542470 | AT5G59250.1 | 30.595 | 487 | 307 | 10 | 34 | 499 | 77 | 553 | 3.05e-63 | 216 |
| Msa0542470 | AT1G08930.1 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 1.94e-62 | 213 |
| Msa0542470 | AT1G08930.2 | 29.637 | 496 | 311 | 10 | 22 | 505 | 25 | 494 | 1.94e-62 | 213 |
| Msa0542470 | AT3G03090.1 | 29.941 | 511 | 309 | 12 | 21 | 499 | 6 | 499 | 4.13e-61 | 209 |
| Msa0542470 | AT3G05165.3 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa0542470 | AT3G05165.2 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa0542470 | AT3G05165.1 | 28.601 | 479 | 312 | 8 | 31 | 499 | 2 | 460 | 1.47e-60 | 207 |
| Msa0542470 | AT2G48020.2 | 30.947 | 475 | 294 | 9 | 31 | 499 | 12 | 458 | 9.99e-60 | 204 |
| Msa0542470 | AT2G48020.1 | 30.947 | 475 | 294 | 9 | 31 | 499 | 12 | 458 | 9.99e-60 | 204 |
| Msa0542470 | AT3G05160.1 | 28.723 | 470 | 299 | 9 | 40 | 499 | 8 | 451 | 4.71e-59 | 202 |
| Msa0542470 | AT5G18840.1 | 31.377 | 494 | 301 | 11 | 22 | 505 | 16 | 481 | 6.01e-59 | 203 |
| Msa0542470 | AT5G27350.1 | 29.873 | 472 | 293 | 12 | 43 | 500 | 15 | 462 | 1.56e-58 | 202 |
| Msa0542470 | AT5G27360.1 | 29.193 | 483 | 314 | 11 | 27 | 499 | 1 | 465 | 3.71e-58 | 201 |
| Msa0542470 | AT5G27360.3 | 29.193 | 483 | 314 | 11 | 27 | 499 | 49 | 513 | 1.32e-57 | 201 |
| Msa0542470 | AT1G54730.2 | 30.496 | 423 | 268 | 9 | 83 | 499 | 60 | 462 | 7.81e-57 | 197 |
| Msa0542470 | AT3G05155.1 | 30.149 | 471 | 280 | 11 | 45 | 499 | 18 | 455 | 2.26e-56 | 196 |
| Msa0542470 | AT4G04760.1 | 30.573 | 471 | 283 | 12 | 51 | 505 | 28 | 470 | 8.18e-56 | 194 |
| Msa0542470 | AT4G04760.3 | 31.019 | 432 | 265 | 9 | 85 | 505 | 2 | 411 | 2.51e-55 | 192 |
| Msa0542470 | AT3G05160.3 | 29.216 | 421 | 272 | 7 | 85 | 499 | 2 | 402 | 6.46e-55 | 190 |
| Msa0542470 | AT3G05160.2 | 29.216 | 421 | 272 | 7 | 85 | 499 | 2 | 402 | 6.46e-55 | 190 |
| Msa0542470 | AT5G26250.1 | 29.518 | 498 | 314 | 12 | 54 | 526 | 21 | 506 | 1.25e-54 | 192 |
| Msa0542470 | AT4G04750.3 | 28.355 | 529 | 329 | 15 | 3 | 505 | 14 | 518 | 1.41e-53 | 189 |
| Msa0542470 | AT4G04750.1 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 3.37e-53 | 187 |
| Msa0542470 | AT4G04750.2 | 29.025 | 472 | 300 | 12 | 45 | 505 | 27 | 474 | 3.37e-53 | 187 |
| Msa0542470 | AT3G19940.1 | 27.708 | 480 | 308 | 11 | 54 | 505 | 24 | 492 | 3.86e-52 | 186 |
| Msa0542470 | AT1G08900.5 | 30.404 | 421 | 271 | 8 | 83 | 499 | 11 | 413 | 4.50e-52 | 183 |
| Msa0542470 | AT1G08900.3 | 30.404 | 421 | 271 | 8 | 83 | 499 | 45 | 447 | 7.00e-52 | 183 |
| Msa0542470 | AT1G50310.1 | 27.140 | 479 | 313 | 11 | 54 | 505 | 24 | 493 | 8.11e-52 | 185 |
| Msa0542470 | AT1G08900.1 | 28.601 | 479 | 311 | 10 | 25 | 499 | 4 | 455 | 9.48e-52 | 183 |
| Msa0542470 | AT1G08900.2 | 28.601 | 479 | 311 | 10 | 25 | 499 | 4 | 455 | 9.48e-52 | 183 |
| Msa0542470 | AT1G08890.1 | 29.677 | 465 | 295 | 11 | 45 | 499 | 15 | 457 | 3.61e-51 | 182 |
| Msa0542470 | AT4G04760.2 | 29.336 | 467 | 291 | 12 | 51 | 505 | 28 | 467 | 3.76e-51 | 182 |
| Msa0542470 | AT3G05960.1 | 27.309 | 498 | 328 | 10 | 54 | 527 | 20 | 507 | 1.80e-50 | 181 |
| Msa0542470 | AT1G77210.2 | 27.203 | 522 | 319 | 20 | 35 | 520 | 8 | 504 | 2.23e-50 | 181 |
| Msa0542470 | AT1G77210.1 | 27.203 | 522 | 319 | 20 | 35 | 520 | 8 | 504 | 2.23e-50 | 181 |
| Msa0542470 | AT5G26340.1 | 27.000 | 500 | 324 | 10 | 55 | 525 | 24 | 511 | 3.15e-50 | 181 |
| Msa0542470 | AT1G08920.1 | 28.511 | 470 | 296 | 11 | 45 | 499 | 18 | 462 | 3.22e-49 | 176 |
| Msa0542470 | AT1G05030.1 | 30.159 | 441 | 295 | 7 | 62 | 500 | 86 | 515 | 5.53e-49 | 177 |
| Msa0542470 | AT3G05400.1 | 28.390 | 472 | 299 | 12 | 45 | 504 | 17 | 461 | 1.15e-48 | 175 |
| Msa0542470 | AT1G30220.1 | 33.435 | 329 | 211 | 5 | 54 | 378 | 27 | 351 | 1.53e-48 | 177 |
| Msa0542470 | AT1G30220.1 | 45.833 | 96 | 52 | 0 | 410 | 505 | 464 | 559 | 1.49e-18 | 89.4 |
| Msa0542470 | AT2G35740.1 | 32.353 | 340 | 211 | 7 | 54 | 382 | 25 | 356 | 5.65e-48 | 175 |
| Msa0542470 | AT2G35740.1 | 39.806 | 103 | 62 | 0 | 401 | 503 | 458 | 560 | 1.78e-17 | 85.9 |
| Msa0542470 | AT3G05165.6 | 27.523 | 436 | 287 | 7 | 31 | 456 | 2 | 418 | 7.64e-48 | 174 |
| Msa0542470 | AT4G02050.2 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 1.25e-47 | 173 |
| Msa0542470 | AT4G02050.1 | 25.407 | 492 | 327 | 9 | 41 | 505 | 13 | 491 | 1.25e-47 | 173 |
| Msa0542470 | AT3G05165.4 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.43e-47 | 172 |
| Msa0542470 | AT3G05165.5 | 27.765 | 425 | 278 | 7 | 31 | 445 | 2 | 407 | 1.43e-47 | 172 |
| Msa0542470 | AT4G16480.2 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa0542470 | AT4G16480.2 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa0542470 | AT4G16480.3 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa0542470 | AT4G16480.3 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa0542470 | AT4G16480.1 | 31.714 | 350 | 216 | 6 | 54 | 390 | 26 | 365 | 2.14e-47 | 174 |
| Msa0542470 | AT4G16480.1 | 36.066 | 122 | 70 | 1 | 401 | 514 | 459 | 580 | 2.48e-17 | 85.5 |
| Msa0542470 | AT1G67300.1 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 3.62e-47 | 171 |
| Msa0542470 | AT1G67300.3 | 29.331 | 508 | 314 | 14 | 15 | 500 | 3 | 487 | 3.62e-47 | 171 |
| Msa0542470 | AT1G54730.5 | 27.896 | 423 | 258 | 8 | 83 | 499 | 60 | 441 | 4.36e-47 | 170 |
| Msa0542470 | AT1G08920.2 | 28.059 | 474 | 300 | 11 | 45 | 499 | 18 | 469 | 5.53e-47 | 171 |
| Msa0542470 | AT1G67300.2 | 29.470 | 509 | 313 | 15 | 15 | 500 | 3 | 488 | 1.50e-46 | 170 |
| Msa0542470 | AT5G27360.2 | 31.081 | 370 | 233 | 9 | 134 | 499 | 10 | 361 | 1.56e-46 | 167 |
| Msa0542470 | AT5G27360.5 | 31.081 | 370 | 233 | 9 | 134 | 499 | 10 | 361 | 1.56e-46 | 167 |
| Msa0542470 | AT1G54730.3 | 29.474 | 380 | 243 | 8 | 83 | 456 | 60 | 420 | 5.47e-46 | 167 |
| Msa0542470 | AT3G19930.1 | 26.680 | 491 | 315 | 12 | 51 | 511 | 20 | 495 | 8.64e-46 | 168 |
| Msa0542470 | AT3G19930.2 | 26.680 | 491 | 315 | 12 | 51 | 511 | 20 | 495 | 8.64e-46 | 168 |
| Msa0542470 | AT1G11260.1 | 25.200 | 500 | 329 | 12 | 54 | 517 | 22 | 512 | 1.97e-45 | 167 |
| Msa0542470 | AT1G34580.1 | 26.978 | 493 | 311 | 13 | 51 | 509 | 21 | 498 | 2.60e-45 | 167 |
| Msa0542470 | AT5G23270.1 | 25.451 | 499 | 324 | 11 | 46 | 511 | 15 | 498 | 8.80e-45 | 165 |
| Msa0542470 | AT5G17010.2 | 27.033 | 492 | 247 | 11 | 40 | 499 | 25 | 436 | 4.47e-44 | 162 |
| Msa0542470 | AT1G05030.2 | 28.482 | 481 | 318 | 10 | 22 | 500 | 7 | 463 | 5.15e-44 | 162 |
| Msa0542470 | AT1G07340.1 | 27.389 | 471 | 303 | 10 | 55 | 498 | 23 | 481 | 8.22e-44 | 162 |
| Msa0542470 | AT1G34580.2 | 27.660 | 423 | 279 | 9 | 101 | 509 | 39 | 448 | 9.07e-44 | 161 |
| Msa0542470 | AT3G05400.2 | 27.331 | 472 | 284 | 13 | 45 | 504 | 17 | 441 | 3.80e-43 | 159 |
| Msa0542470 | AT4G21480.1 | 26.653 | 484 | 308 | 13 | 54 | 505 | 22 | 490 | 8.27e-43 | 160 |
| Msa0542470 | AT1G67300.4 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 3.74e-42 | 156 |
| Msa0542470 | AT1G67300.5 | 29.464 | 448 | 271 | 15 | 15 | 440 | 3 | 427 | 3.74e-42 | 156 |
| Msa0542470 | AT1G67300.6 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 4.91e-42 | 156 |
| Msa0542470 | AT1G67300.7 | 29.241 | 448 | 272 | 14 | 15 | 440 | 3 | 427 | 4.91e-42 | 156 |
| Msa0542470 | AT1G79820.2 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 1.70e-41 | 156 |
| Msa0542470 | AT1G79820.1 | 29.274 | 468 | 296 | 12 | 45 | 500 | 44 | 488 | 1.70e-41 | 156 |
| Msa0542470 | AT5G27360.4 | 27.251 | 422 | 280 | 10 | 27 | 438 | 1 | 405 | 4.79e-41 | 153 |
| Msa0542470 | AT3G20460.1 | 25.917 | 436 | 297 | 8 | 70 | 499 | 68 | 483 | 1.40e-40 | 153 |
| Msa0542470 | AT1G54730.9 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 3.59e-40 | 150 |
| Msa0542470 | AT1G54730.7 | 29.261 | 352 | 224 | 8 | 83 | 428 | 60 | 392 | 3.59e-40 | 150 |
| Msa0542470 | AT1G08900.4 | 28.307 | 378 | 250 | 7 | 83 | 456 | 53 | 413 | 1.32e-38 | 147 |
| Msa0542470 | AT1G08920.3 | 26.824 | 425 | 276 | 9 | 45 | 456 | 18 | 420 | 1.66e-38 | 147 |
| Msa0542470 | AT1G50310.2 | 27.666 | 347 | 235 | 9 | 166 | 505 | 13 | 350 | 2.07e-38 | 145 |
| Msa0542470 | AT1G54730.4 | 26.579 | 380 | 233 | 7 | 83 | 456 | 60 | 399 | 1.27e-36 | 140 |
| Msa0542470 | AT5G61520.1 | 25.673 | 483 | 317 | 10 | 54 | 505 | 23 | 494 | 2.30e-36 | 142 |
| Msa0542470 | AT1G79820.4 | 28.814 | 413 | 265 | 10 | 45 | 448 | 44 | 436 | 2.39e-36 | 140 |
| Msa0542470 | AT2G48020.4 | 28.011 | 357 | 229 | 6 | 54 | 404 | 33 | 367 | 3.54e-36 | 139 |
| Msa0542470 | AT2G48020.3 | 27.964 | 329 | 215 | 4 | 54 | 382 | 33 | 339 | 2.68e-35 | 135 |
| Msa0542470 | AT3G05155.2 | 28.955 | 335 | 204 | 7 | 45 | 372 | 18 | 325 | 3.43e-35 | 135 |
| Msa0542470 | AT1G77210.3 | 27.224 | 371 | 229 | 14 | 167 | 520 | 9 | 355 | 4.28e-35 | 135 |
| Msa0542470 | AT3G51490.2 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.59e-35 | 139 |
| Msa0542470 | AT3G51490.2 | 32.468 | 231 | 139 | 5 | 284 | 502 | 495 | 720 | 1.68e-21 | 99.0 |
| Msa0542470 | AT3G51490.1 | 36.864 | 236 | 144 | 5 | 53 | 285 | 2 | 235 | 8.76e-35 | 139 |
| Msa0542470 | AT3G51490.1 | 29.437 | 231 | 138 | 5 | 284 | 502 | 495 | 712 | 7.36e-19 | 90.9 |
| Msa0542470 | AT1G54730.11 | 28.947 | 304 | 196 | 6 | 69 | 372 | 50 | 333 | 4.84e-34 | 132 |
| Msa0542470 | AT5G61520.2 | 26.098 | 410 | 288 | 6 | 101 | 505 | 47 | 446 | 1.91e-33 | 133 |
| Msa0542470 | AT1G54730.8 | 26.420 | 352 | 213 | 8 | 83 | 428 | 60 | 371 | 6.15e-31 | 124 |
| Msa0542470 | AT1G20840.2 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 6.29e-31 | 127 |
| Msa0542470 | AT1G20840.2 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.13e-22 | 100 |
| Msa0542470 | AT1G20840.1 | 36.449 | 214 | 124 | 5 | 59 | 266 | 8 | 215 | 6.29e-31 | 127 |
| Msa0542470 | AT1G20840.1 | 32.751 | 229 | 135 | 5 | 287 | 502 | 497 | 719 | 5.13e-22 | 100 |
| Msa0542470 | AT1G54730.10 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 6.18e-30 | 120 |
| Msa0542470 | AT1G54730.6 | 27.757 | 263 | 178 | 3 | 83 | 345 | 60 | 310 | 6.18e-30 | 120 |
| Msa0542470 | AT3G51490.3 | 39.080 | 174 | 103 | 3 | 113 | 285 | 14 | 185 | 7.33e-27 | 115 |
| Msa0542470 | AT3G51490.3 | 32.468 | 231 | 139 | 5 | 284 | 502 | 445 | 670 | 1.88e-21 | 98.6 |
| Msa0542470 | AT4G35300.4 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.4 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.8 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.8 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.6 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.6 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.11 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.11 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.1 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.1 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.10 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.10 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.7 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.33e-26 | 114 |
| Msa0542470 | AT4G35300.7 | 32.751 | 229 | 133 | 6 | 288 | 502 | 505 | 726 | 1.21e-24 | 108 |
| Msa0542470 | AT4G35300.9 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa0542470 | AT4G35300.9 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa0542470 | AT4G35300.2 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa0542470 | AT4G35300.2 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa0542470 | AT4G35300.3 | 38.308 | 201 | 116 | 6 | 66 | 260 | 15 | 213 | 1.38e-26 | 114 |
| Msa0542470 | AT4G35300.3 | 32.751 | 229 | 133 | 6 | 288 | 502 | 495 | 716 | 1.33e-24 | 108 |
| Msa0542470 | AT1G79820.3 | 26.068 | 468 | 263 | 13 | 45 | 500 | 44 | 440 | 1.27e-25 | 110 |
| Msa0542470 | AT4G35300.5 | 32.751 | 229 | 133 | 6 | 288 | 502 | 308 | 529 | 5.70e-25 | 108 |
| Msa0542470 | AT5G43350.1 | 22.538 | 457 | 295 | 14 | 104 | 509 | 76 | 524 | 5.66e-14 | 74.7 |
| Msa0542470 | AT5G43340.1 | 23.165 | 436 | 291 | 14 | 105 | 505 | 82 | 508 | 4.81e-13 | 72.0 |
| Msa0542470 | AT2G38940.1 | 21.896 | 443 | 290 | 11 | 105 | 499 | 81 | 515 | 1.93e-12 | 70.1 |
| Msa0542470 | AT1G16370.1 | 25.450 | 444 | 262 | 20 | 91 | 510 | 116 | 514 | 7.46e-12 | 68.2 |
| Msa0542470 | AT3G54700.2 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 1.22e-11 | 67.4 |
| Msa0542470 | AT3G54700.1 | 22.991 | 448 | 293 | 13 | 105 | 509 | 81 | 519 | 1.22e-11 | 67.4 |
| Msa0542470 | AT1G79820.5 | 37.748 | 151 | 80 | 5 | 357 | 500 | 235 | 378 | 5.61e-11 | 65.1 |
Find 147 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGTCCTTTGAGATATT+TGG | 0.082116 | 4_1:-27525012 | Msa0542470:three_prime_UTR |
| CCAGCGGCCATTAAAATTTC+TGG | 0.104258 | 4_1:+27525926 | None:intergenic |
| ACTCTTTCATTATTTGAAAA+AGG | 0.131055 | 4_1:-27525740 | Msa0542470:CDS |
| TTGGACTCGGCCCTGTTTGC+TGG | 0.157878 | 4_1:-27525658 | Msa0542470:CDS |
| AACAAAGACCGTCTTTATTT+TGG | 0.178346 | 4_1:-27525855 | Msa0542470:CDS |
| TGTATCTCTATTGGGTAGTT+TGG | 0.222757 | 4_1:-27526593 | Msa0542470:CDS |
| CGAGAATTTGATATCTGATA+TGG | 0.240675 | 4_1:-27525185 | Msa0542470:three_prime_UTR |
| AAGGCCGGAAAACGCGTAAT+TGG | 0.248896 | 4_1:+27526303 | None:intergenic |
| TCTCTCAACAATGTTCTTCT+TGG | 0.260513 | 4_1:-27526947 | Msa0542470:CDS |
| ATTTCATGTAAGTCAATAAT+AGG | 0.272933 | 4_1:-27525079 | Msa0542470:three_prime_UTR |
| GCTGGAATTGGAATAGGTTT+TGG | 0.278916 | 4_1:-27526439 | Msa0542470:CDS |
| TTTGAGTATTGTATCTCTAT+TGG | 0.289099 | 4_1:-27526602 | Msa0542470:CDS |
| CAGATATTATTGGTAGAAAA+TGG | 0.294464 | 4_1:-27526555 | Msa0542470:CDS |
| TCTTATCTTCCAATTGTTGT+TGG | 0.306828 | 4_1:+27527014 | None:intergenic |
| AAGATGATGTTCCAAGAAAA+TGG | 0.307041 | 4_1:-27527136 | Msa0542470:CDS |
| GACTGCTTGTTTGTTCTGTA+TGG | 0.317788 | 4_1:-27525768 | Msa0542470:CDS |
| CTTCGCCGGATGCTGATTAC+TGG | 0.318031 | 4_1:-27526007 | Msa0542470:CDS |
| GTATCTCTATTGGGTAGTTT+GGG | 0.319309 | 4_1:-27526592 | Msa0542470:CDS |
| CTTCTCATTACTAGCACAAT+TGG | 0.327974 | 4_1:-27525794 | Msa0542470:CDS |
| GTACTTGTTCTTTGTTCCTA+AGG | 0.334633 | 4_1:+27527084 | None:intergenic |
| GGAAGATTGTTAGCTGGAAT+TGG | 0.335016 | 4_1:-27526451 | Msa0542470:CDS |
| CCGATCTTGCTTCGTCAATT+CGG | 0.337686 | 4_1:+27526167 | None:intergenic |
| AATGGGGAAATGGGTTTATC+AGG | 0.344962 | 4_1:-27527112 | Msa0542470:CDS |
| TTGAGTATTGTATCTCTATT+GGG | 0.346213 | 4_1:-27526601 | Msa0542470:CDS |
| TTGTTAGCTGGAATTGGAAT+AGG | 0.355045 | 4_1:-27526445 | Msa0542470:CDS |
| AGAAAATGGTAATGGGGAAA+TGG | 0.358662 | 4_1:-27527122 | Msa0542470:CDS |
| CAACTTGTGCAGAACAAAAC+TGG | 0.362425 | 4_1:-27525344 | Msa0542470:CDS |
| TCATTGTAATTCCACCCATT+TGG | 0.368460 | 4_1:+27526506 | None:intergenic |
| TCTAAAGATAACTGAGGTTC+AGG | 0.370786 | 4_1:-27526644 | Msa0542470:CDS |
| GTCCTCGTATTTACCAGAAT+TGG | 0.372355 | 4_1:+27526069 | None:intergenic |
| TACTTTATCAATAAGAATAA+TGG | 0.372573 | 4_1:+27525829 | None:intergenic |
| CTCCGCCACCGGCGCTTCGC+CGG | 0.383124 | 4_1:-27526021 | Msa0542470:CDS |
| GTATCCAACGCAATTTCTTT+CGG | 0.383566 | 4_1:-27525527 | Msa0542470:CDS |
| TGAGAATGAACATGGGAGTC+AGG | 0.384972 | 4_1:-27525396 | Msa0542470:CDS |
| TGTTCCAAGAAAATGGTAAT+GGG | 0.389476 | 4_1:-27527129 | Msa0542470:CDS |
| GGGCCATTAGTGATTGCATT+AGG | 0.390751 | 4_1:-27525719 | Msa0542470:CDS |
| AATCCATCAGGGTCGTATAA+AGG | 0.392415 | 4_1:+27525294 | None:intergenic |
| CACTCGGAGCTGTAGCGAAT+AGG | 0.400992 | 4_1:-27525586 | Msa0542470:CDS |
| TGGACTCGGCCCTGTTTGCT+GGG | 0.402706 | 4_1:-27525657 | Msa0542470:CDS |
| GATGTCAAAACCCAGCAAAC+AGG | 0.402833 | 4_1:+27525647 | None:intergenic |
| ATCATTAGTACTTGATATGA+AGG | 0.422297 | 4_1:+27526475 | None:intergenic |
| GAAAATGGTAATGGGGAAAT+GGG | 0.424079 | 4_1:-27527121 | Msa0542470:CDS |
| ATACCTAATGCAATCACTAA+TGG | 0.428309 | 4_1:+27525716 | None:intergenic |
| GATATCTCAGCAATATATAT+AGG | 0.430921 | 4_1:+27526403 | None:intergenic |
| GGAAGAACATCAGATATTAT+TGG | 0.433859 | 4_1:-27526565 | Msa0542470:CDS |
| TACTTGTTCTTTGTTCCTAA+GGG | 0.434909 | 4_1:+27527085 | None:intergenic |
| AACAATGTTCTTCTTGGCTA+TGG | 0.435667 | 4_1:-27526941 | Msa0542470:intron |
| ACTGCTTGTTTGTTCTGTAT+GGG | 0.446903 | 4_1:-27525767 | Msa0542470:CDS |
| ACACTAGTACCTGAAACAAA+AGG | 0.446951 | 4_1:-27525449 | Msa0542470:CDS |
| GGCTGCAGTTGTATTCCAAA+TGG | 0.451381 | 4_1:-27526521 | Msa0542470:CDS |
| CGGATGCTGATTACTGGTCT+TGG | 0.455359 | 4_1:-27526001 | Msa0542470:CDS |
| GCCTGAGCACGCACTCGTAA+AGG | 0.455930 | 4_1:+27525614 | None:intergenic |
| GCCTTTCGGTACACATAAGT+TGG | 0.456022 | 4_1:-27526285 | Msa0542470:CDS |
| CTGGAATGACAAAATCCATC+AGG | 0.456148 | 4_1:+27525282 | None:intergenic |
| AACAACAATTGGAAGATAAG+AGG | 0.456265 | 4_1:-27527012 | Msa0542470:CDS |
| AGTGAGCCTCTAGTGAGATT+TGG | 0.456475 | 4_1:+27526379 | None:intergenic |
| ACATGACTTGGCAACAATAG+AGG | 0.460226 | 4_1:+27527343 | None:intergenic |
| ACTCGGAGCTGTAGCGAATA+GGG | 0.461405 | 4_1:-27525585 | Msa0542470:CDS |
| CCCTTTACGAGTGCGTGCTC+AGG | 0.461504 | 4_1:-27525615 | Msa0542470:CDS |
| TTCTCATTACTAGCACAATT+GGG | 0.462959 | 4_1:-27525793 | Msa0542470:CDS |
| CGTGCTCAGGCATCTGCACT+CGG | 0.465823 | 4_1:-27525602 | Msa0542470:CDS |
| TCATATCAAGTACTAATGAT+TGG | 0.466636 | 4_1:-27526472 | Msa0542470:CDS |
| CCGAATTGACGAAGCAAGAT+CGG | 0.470119 | 4_1:-27526167 | Msa0542470:CDS |
| ATGTTCCAAGAAAATGGTAA+TGG | 0.470800 | 4_1:-27527130 | Msa0542470:CDS |
| AAGATAAGAGGAACAGTACT+AGG | 0.471084 | 4_1:-27527000 | Msa0542470:CDS |
| ATTATTCTTATTGATAAAGT+AGG | 0.477981 | 4_1:-27525827 | Msa0542470:CDS |
| ATCCGGCGAAGCGCCGGTGG+CGG | 0.482961 | 4_1:+27526019 | None:intergenic |
| CCTGAGCACGCACTCGTAAA+GGG | 0.483401 | 4_1:+27525615 | None:intergenic |
| AATTGAAATATATGTAGCTC+TGG | 0.483498 | 4_1:+27525263 | None:intergenic |
| GGTTTATCAGGAATTCCCTT+AGG | 0.485952 | 4_1:-27527100 | Msa0542470:CDS |
| CTATTGGGTAGTTTGGGTGG+TGG | 0.488972 | 4_1:-27526586 | Msa0542470:CDS |
| GAGGCTAGCAGAAATACAAC+AGG | 0.497842 | 4_1:-27526104 | Msa0542470:CDS |
| CATATGAATTACATCCCTCA+TGG | 0.499141 | 4_1:+27524949 | None:intergenic |
| ATCAGCATCCGGCGAAGCGC+CGG | 0.504116 | 4_1:+27526013 | None:intergenic |
| TCAAAGGACCATGTGGAGAC+AGG | 0.506999 | 4_1:+27525021 | None:intergenic |
| GAGAATTTGATATCTGATAT+GGG | 0.507816 | 4_1:-27525184 | Msa0542470:three_prime_UTR |
| CACTAGTACCTGAAACAAAA+GGG | 0.508537 | 4_1:-27525448 | Msa0542470:CDS |
| CAAACCTTTGTGTCTGAACA+AGG | 0.513720 | 4_1:+27527200 | None:intergenic |
| ACTCACATGGATATGATCTT+CGG | 0.514882 | 4_1:-27525213 | Msa0542470:three_prime_UTR |
| ATGAGAAAGAAGTGGAAGAG+AGG | 0.523249 | 4_1:-27526123 | Msa0542470:CDS |
| CAAGACCAGTAATCAGCATC+CGG | 0.526849 | 4_1:+27526002 | None:intergenic |
| ATGATTGGAAGATTGTTAGC+TGG | 0.528824 | 4_1:-27526457 | Msa0542470:CDS |
| ACTTATGTGTACCGAAAGGC+CGG | 0.528846 | 4_1:+27526288 | None:intergenic |
| TGAATTGCTCTCTCCGCCAC+CGG | 0.529504 | 4_1:-27526032 | Msa0542470:CDS |
| ATAAATGTAGGAATTATGCT+TGG | 0.533082 | 4_1:-27526334 | Msa0542470:CDS |
| CCAACGCAATTTCTTTCGGC+GGG | 0.535097 | 4_1:-27525523 | Msa0542470:CDS |
| GACGGTCTTTGTTATACCTA+CGG | 0.535206 | 4_1:+27525865 | None:intergenic |
| CAGGGAAAAGAGATGGAGCT+AGG | 0.539460 | 4_1:-27525377 | Msa0542470:CDS |
| CGCGGCTTTAATCACTCACA+TGG | 0.541974 | 4_1:-27525226 | Msa0542470:three_prime_UTR |
| GCTGCAGTTGTATTCCAAAT+GGG | 0.552850 | 4_1:-27526520 | Msa0542470:CDS |
| AGCATCCGGCGAAGCGCCGG+TGG | 0.553482 | 4_1:+27526016 | None:intergenic |
| ACCAACCATCTCGGCGACTC+AGG | 0.557547 | 4_1:+27526199 | None:intergenic |
| TCTCTATTGGGTAGTTTGGG+TGG | 0.559075 | 4_1:-27526589 | Msa0542470:CDS |
| GCAGAAATACAACAGGCTGC+TGG | 0.560147 | 4_1:-27526097 | Msa0542470:CDS |
| AAACGAAGATGAGAAAGAAG+TGG | 0.563366 | 4_1:-27526131 | Msa0542470:CDS |
| TGAAATTAAAGAACATGACT+TGG | 0.563646 | 4_1:+27527331 | None:intergenic |
| CAATTGTGCTAGTAATGAGA+AGG | 0.568147 | 4_1:+27525795 | None:intergenic |
| TCATTAGTACTTGATATGAA+GGG | 0.569168 | 4_1:+27526476 | None:intergenic |
| ACACCTTTATACGACCCTGA+TGG | 0.569736 | 4_1:-27525297 | Msa0542470:three_prime_UTR |
| TCCTGAGTCGCCGAGATGGT+TGG | 0.572336 | 4_1:-27526200 | Msa0542470:CDS |
| TGGGAGTCAGGGAAAAGAGA+TGG | 0.575169 | 4_1:-27525384 | Msa0542470:CDS |
| GTTGTTTCCAAATATCTCAA+AGG | 0.577067 | 4_1:+27525005 | None:intergenic |
| GAGAATGAACATGGGAGTCA+GGG | 0.577348 | 4_1:-27525395 | Msa0542470:CDS |
| TGGAGAGTAATGCTTGCTGT+TGG | 0.577364 | 4_1:-27526265 | Msa0542470:CDS |
| GAACAAAGAACAAGTACAAG+AGG | 0.581349 | 4_1:-27527078 | Msa0542470:CDS |
| CATGACTTGGCAACAATAGA+GGG | 0.582567 | 4_1:+27527344 | None:intergenic |
| AGAGAGCAATTCACGCCACA+CGG | 0.586023 | 4_1:+27526042 | None:intergenic |
| ATGTCAAAACCCAGCAAACA+GGG | 0.587235 | 4_1:+27525648 | None:intergenic |
| TTCTGCATTACCAACCATCT+CGG | 0.587579 | 4_1:+27526190 | None:intergenic |
| AAATTGCGTTGGATACAGAC+AGG | 0.590532 | 4_1:+27525534 | None:intergenic |
| TAGAAAATGGACAATGGCAT+TGG | 0.591364 | 4_1:-27526542 | Msa0542470:CDS |
| ACAGGAAAGACATGGCTACA+AGG | 0.594862 | 4_1:+27525552 | None:intergenic |
| ATAATAGGATTGTATATGAA+CGG | 0.595528 | 4_1:-27525064 | Msa0542470:three_prime_UTR |
| ACAACCTTGTTCAGACACAA+AGG | 0.595654 | 4_1:-27527204 | Msa0542470:five_prime_UTR |
| AATTGTGCTAGTAATGAGAA+GGG | 0.597166 | 4_1:+27525796 | None:intergenic |
| GCAGATGTGGGTGTGATGAG+TGG | 0.598876 | 4_1:-27526691 | Msa0542470:intron |
| TTATTCCTGAGTCGCCGAGA+TGG | 0.599472 | 4_1:-27526204 | Msa0542470:CDS |
| CCCGCCGAAAGAAATTGCGT+TGG | 0.604005 | 4_1:+27525523 | None:intergenic |
| CAATGGTTTAGAACTACAGA+AGG | 0.607868 | 4_1:+27527391 | None:intergenic |
| GAGATGATCCTGTCTCCACA+TGG | 0.609706 | 4_1:-27525029 | Msa0542470:three_prime_UTR |
| ATGATGTTTGAGAATGAACA+TGG | 0.614564 | 4_1:-27525404 | Msa0542470:CDS |
| TCCAACGCAATTTCTTTCGG+CGG | 0.616866 | 4_1:-27525524 | Msa0542470:CDS |
| CATTACAGTGTACTCCATGA+GGG | 0.620975 | 4_1:-27524963 | Msa0542470:three_prime_UTR |
| CATTAGTACTTGATATGAAG+GGG | 0.622524 | 4_1:+27526477 | None:intergenic |
| GCAAAACCAATGAACACTGA+AGG | 0.623428 | 4_1:+27526235 | None:intergenic |
| TGATTTATCTTCAATTCCAG+CGG | 0.623893 | 4_1:+27525910 | None:intergenic |
| GTTCCAAGAAAATGGTAATG+GGG | 0.628643 | 4_1:-27527128 | Msa0542470:CDS |
| AATGGCCACCAAAATAAAGA+CGG | 0.634627 | 4_1:+27525847 | None:intergenic |
| GCAGTTGTATTCCAAATGGG+TGG | 0.636411 | 4_1:-27526517 | Msa0542470:CDS |
| TGCCAATTCTGGTAAATACG+AGG | 0.640126 | 4_1:-27526071 | Msa0542470:CDS |
| ATATCACCAAATCTCACTAG+AGG | 0.642480 | 4_1:-27526385 | Msa0542470:CDS |
| CTAGCTGCTACTGTTGCCGT+AGG | 0.648188 | 4_1:-27525881 | Msa0542470:CDS |
| TATTGGTAGAAAATGGACAA+TGG | 0.649056 | 4_1:-27526548 | Msa0542470:CDS |
| ATCAGGGTCGTATAAAGGTG+TGG | 0.650273 | 4_1:+27525299 | None:intergenic |
| GAGAGCAATTCACGCCACAC+GGG | 0.655886 | 4_1:+27526043 | None:intergenic |
| TAGTGTGAAAACAAAGACAA+TGG | 0.657278 | 4_1:+27525466 | None:intergenic |
| AAATATCTCAAAGGACCATG+TGG | 0.659478 | 4_1:+27525014 | None:intergenic |
| TCATTACAGTGTACTCCATG+AGG | 0.660152 | 4_1:-27524964 | Msa0542470:three_prime_UTR |
| TGGAATGACAAAATCCATCA+GGG | 0.662835 | 4_1:+27525283 | None:intergenic |
| CATGTGAGTGATTAAAGCCG+CGG | 0.666934 | 4_1:+27525227 | None:intergenic |
| ATTGTGCTAGTAATGAGAAG+GGG | 0.672038 | 4_1:+27525797 | None:intergenic |
| TCCAACTTATGTGTACCGAA+AGG | 0.681195 | 4_1:+27526284 | None:intergenic |
| GTAGCGAATAGGGTTTGCAG+CGG | 0.685373 | 4_1:-27525575 | Msa0542470:CDS |
| AGAAGATCTAAAGATAACTG+AGG | 0.686492 | 4_1:-27526650 | Msa0542470:CDS |
| GGATACAGACAGGAAAGACA+TGG | 0.687845 | 4_1:+27525544 | None:intergenic |
| TGATGTTTGAGAATGAACAT+GGG | 0.695121 | 4_1:-27525403 | Msa0542470:CDS |
| AATACGAGGACAAACCCGTG+TGG | 0.757333 | 4_1:-27526057 | Msa0542470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAATAGTCAAGT+TGG | - | chr4_1:27524916-27524935 | Msa0542470:three_prime_UTR | 15.0% |
| !! | AAAAAAATAATAGTCAAGTT+GGG | - | chr4_1:27524917-27524936 | Msa0542470:three_prime_UTR | 15.0% |
| !!! | TTTTATTGAGATGATTTTTA+CGG | - | chr4_1:27525601-27525620 | Msa0542470:CDS | 15.0% |
| !! | TACTTTATCAATAAGAATAA+TGG | + | chr4_1:27526511-27526530 | None:intergenic | 15.0% |
| !! | ATTATTCTTATTGATAAAGT+AGG | - | chr4_1:27526510-27526529 | Msa0542470:CDS | 15.0% |
| !!! | TGTGTATGTGTTATTAATTA+TGG | - | chr4_1:27525575-27525594 | Msa0542470:CDS | 20.0% |
| !!! | GTGTATGTGTTATTAATTAT+GGG | - | chr4_1:27525576-27525595 | Msa0542470:CDS | 20.0% |
| !!! | TTTATTGAGATGATTTTTAC+GGG | - | chr4_1:27525602-27525621 | Msa0542470:CDS | 20.0% |
| !! | ACTCTTTCATTATTTGAAAA+AGG | - | chr4_1:27526597-27526616 | Msa0542470:CDS | 20.0% |
| !! | CTCTTTCATTATTTGAAAAA+GGG | - | chr4_1:27526598-27526617 | Msa0542470:CDS | 20.0% |
| !! | ATTTCATGTAAGTCAATAAT+AGG | - | chr4_1:27527258-27527277 | Msa0542470:five_prime_UTR | 20.0% |
| !! | ATAATAGGATTGTATATGAA+CGG | - | chr4_1:27527273-27527292 | Msa0542470:five_prime_UTR | 20.0% |
| ! | TGAAATTAAAGAACATGACT+TGG | + | chr4_1:27525009-27525028 | None:intergenic | 25.0% |
| !!! | TGTTTATTTTTGTGTTTGGT+TGG | + | chr4_1:27525116-27525135 | None:intergenic | 25.0% |
| !!! | AGGTTGTTTATTTTTGTGTT+TGG | + | chr4_1:27525120-27525139 | None:intergenic | 25.0% |
| !! | TTTGAGTATTGTATCTCTAT+TGG | - | chr4_1:27525735-27525754 | Msa0542470:CDS | 25.0% |
| !! | TTGAGTATTGTATCTCTATT+GGG | - | chr4_1:27525736-27525755 | Msa0542470:CDS | 25.0% |
| ! | CAGATATTATTGGTAGAAAA+TGG | - | chr4_1:27525782-27525801 | Msa0542470:CDS | 25.0% |
| ! | TCATTAGTACTTGATATGAA+GGG | + | chr4_1:27525864-27525883 | None:intergenic | 25.0% |
| ! | ATCATTAGTACTTGATATGA+AGG | + | chr4_1:27525865-27525884 | None:intergenic | 25.0% |
| ! | TCATATCAAGTACTAATGAT+TGG | - | chr4_1:27525865-27525884 | Msa0542470:CDS | 25.0% |
| ! | GATATCTCAGCAATATATAT+AGG | + | chr4_1:27525937-27525956 | None:intergenic | 25.0% |
| ! | CCTACATTTATAAAAATCTC+TGG | + | chr4_1:27525994-27526013 | None:intergenic | 25.0% |
| !! | CCAGAGATTTTTATAAATGT+AGG | - | chr4_1:27525991-27526010 | Msa0542470:CDS | 25.0% |
| ! | ATAAATGTAGGAATTATGCT+TGG | - | chr4_1:27526003-27526022 | Msa0542470:CDS | 25.0% |
| !! | TTACAGTCCAGAAATTTTAA+TGG | - | chr4_1:27526404-27526423 | Msa0542470:CDS | 25.0% |
| !!! | TGGAAATGTAGCATTTTTTT+CGG | - | chr4_1:27526656-27526675 | Msa0542470:CDS | 25.0% |
| ! | AATTGAAATATATGTAGCTC+TGG | + | chr4_1:27527077-27527096 | None:intergenic | 25.0% |
| ! | GAGAATTTGATATCTGATAT+GGG | - | chr4_1:27527153-27527172 | Msa0542470:exon | 25.0% |
| ! | AATCCAACATTCCATGTTTT+TGG | - | chr4_1:27525064-27525083 | Msa0542470:three_prime_UTR | 30.0% |
| ATCTTAGACTACCAAAAACA+TGG | + | chr4_1:27525078-27525097 | None:intergenic | 30.0% | |
| AAGATGATGTTCCAAGAAAA+TGG | - | chr4_1:27525201-27525220 | Msa0542470:three_prime_UTR | 30.0% | |
| ATGTTCCAAGAAAATGGTAA+TGG | - | chr4_1:27525207-27525226 | Msa0542470:three_prime_UTR | 30.0% | |
| TGTTCCAAGAAAATGGTAAT+GGG | - | chr4_1:27525208-27525227 | Msa0542470:three_prime_UTR | 30.0% | |
| TACTTGTTCTTTGTTCCTAA+GGG | + | chr4_1:27525255-27525274 | None:intergenic | 30.0% | |
| TCTTATCTTCCAATTGTTGT+TGG | + | chr4_1:27525326-27525345 | None:intergenic | 30.0% | |
| AACAACAATTGGAAGATAAG+AGG | - | chr4_1:27525325-27525344 | Msa0542470:exon | 30.0% | |
| ! | TTTGTGAATTTTTGCAGATG+TGG | - | chr4_1:27525633-27525652 | Msa0542470:CDS | 30.0% |
| ! | TTGTGAATTTTTGCAGATGT+GGG | - | chr4_1:27525634-27525653 | Msa0542470:CDS | 30.0% |
| AGAAGATCTAAAGATAACTG+AGG | - | chr4_1:27525687-27525706 | Msa0542470:CDS | 30.0% | |
| !! | GTTCAGGTAGAAATTTTGAT+TGG | - | chr4_1:27525709-27525728 | Msa0542470:CDS | 30.0% |
| GGAAGAACATCAGATATTAT+TGG | - | chr4_1:27525772-27525791 | Msa0542470:CDS | 30.0% | |
| TATTGGTAGAAAATGGACAA+TGG | - | chr4_1:27525789-27525808 | Msa0542470:CDS | 30.0% | |
| CATTAGTACTTGATATGAAG+GGG | + | chr4_1:27525863-27525882 | None:intergenic | 30.0% | |
| TGATTTATCTTCAATTCCAG+CGG | + | chr4_1:27526430-27526449 | None:intergenic | 30.0% | |
| !! | AACAAAGACCGTCTTTATTT+TGG | - | chr4_1:27526482-27526501 | Msa0542470:CDS | 30.0% |
| AATTGTGCTAGTAATGAGAA+GGG | + | chr4_1:27526544-27526563 | None:intergenic | 30.0% | |
| TTCTCATTACTAGCACAATT+GGG | - | chr4_1:27526544-27526563 | Msa0542470:CDS | 30.0% | |
| ATACCTAATGCAATCACTAA+TGG | + | chr4_1:27526624-27526643 | None:intergenic | 30.0% | |
| ! | TTAGGTATTCTTTTTGTCTG+TGG | - | chr4_1:27526636-27526655 | Msa0542470:CDS | 30.0% |
| !!! | AATGTAGCATTTTTTTCGGT+TGG | - | chr4_1:27526660-27526679 | Msa0542470:CDS | 30.0% |
| TAGTGTGAAAACAAAGACAA+TGG | + | chr4_1:27526874-27526893 | None:intergenic | 30.0% | |
| ATGATGTTTGAGAATGAACA+TGG | - | chr4_1:27526933-27526952 | Msa0542470:intron | 30.0% | |
| TGATGTTTGAGAATGAACAT+GGG | - | chr4_1:27526934-27526953 | Msa0542470:intron | 30.0% | |
| CGAGAATTTGATATCTGATA+TGG | - | chr4_1:27527152-27527171 | Msa0542470:exon | 30.0% | |
| ! | TGTATATGAACGGAGATTTT+TGG | - | chr4_1:27527283-27527302 | Msa0542470:five_prime_UTR | 30.0% |
| ! | GTTGTTTCCAAATATCTCAA+AGG | + | chr4_1:27527335-27527354 | None:intergenic | 30.0% |
| ! | CAATGGTTTAGAACTACAGA+AGG | + | chr4_1:27524949-27524968 | None:intergenic | 35.0% |
| CTACCAAAAACATGGAATGT+TGG | + | chr4_1:27525070-27525089 | None:intergenic | 35.0% | |
| ! | GTTCCAAGAAAATGGTAATG+GGG | - | chr4_1:27525209-27525228 | Msa0542470:three_prime_UTR | 35.0% |
| ! | TTTCCCCATTACCATTTTCT+TGG | + | chr4_1:27525215-27525234 | None:intergenic | 35.0% |
| !! | AGAAAATGGTAATGGGGAAA+TGG | - | chr4_1:27525215-27525234 | Msa0542470:three_prime_UTR | 35.0% |
| !! | GAAAATGGTAATGGGGAAAT+GGG | - | chr4_1:27525216-27525235 | Msa0542470:three_prime_UTR | 35.0% |
| GTACTTGTTCTTTGTTCCTA+AGG | + | chr4_1:27525256-27525275 | None:intergenic | 35.0% | |
| GAACAAAGAACAAGTACAAG+AGG | - | chr4_1:27525259-27525278 | Msa0542470:three_prime_UTR | 35.0% | |
| ! | TGTTTTGCACCAACAACAAT+TGG | - | chr4_1:27525314-27525333 | Msa0542470:exon | 35.0% |
| AAGATAAGAGGAACAGTACT+AGG | - | chr4_1:27525337-27525356 | Msa0542470:CDS | 35.0% | |
| TCTCTCAACAATGTTCTTCT+TGG | - | chr4_1:27525390-27525409 | Msa0542470:CDS | 35.0% | |
| AACAATGTTCTTCTTGGCTA+TGG | - | chr4_1:27525396-27525415 | Msa0542470:CDS | 35.0% | |
| TCTAAAGATAACTGAGGTTC+AGG | - | chr4_1:27525693-27525712 | Msa0542470:CDS | 35.0% | |
| TGTATCTCTATTGGGTAGTT+TGG | - | chr4_1:27525744-27525763 | Msa0542470:CDS | 35.0% | |
| GTATCTCTATTGGGTAGTTT+GGG | - | chr4_1:27525745-27525764 | Msa0542470:CDS | 35.0% | |
| TAGAAAATGGACAATGGCAT+TGG | - | chr4_1:27525795-27525814 | Msa0542470:CDS | 35.0% | |
| TCATTGTAATTCCACCCATT+TGG | + | chr4_1:27525834-27525853 | None:intergenic | 35.0% | |
| ATGATTGGAAGATTGTTAGC+TGG | - | chr4_1:27525880-27525899 | Msa0542470:CDS | 35.0% | |
| TTGTTAGCTGGAATTGGAAT+AGG | - | chr4_1:27525892-27525911 | Msa0542470:CDS | 35.0% | |
| ATATCACCAAATCTCACTAG+AGG | - | chr4_1:27525952-27525971 | Msa0542470:CDS | 35.0% | |
| ! | ATTTTGCCTTCAGTGTTCAT+TGG | - | chr4_1:27526096-27526115 | Msa0542470:CDS | 35.0% |
| AAACGAAGATGAGAAAGAAG+TGG | - | chr4_1:27526206-27526225 | Msa0542470:CDS | 35.0% | |
| ! | CAGTGTTTTCAACAAATCTC+TGG | - | chr4_1:27526363-27526382 | Msa0542470:CDS | 35.0% |
| !!! | AAAGACCGTCTTTATTTTGG+TGG | - | chr4_1:27526485-27526504 | Msa0542470:CDS | 35.0% |
| AATGGCCACCAAAATAAAGA+CGG | + | chr4_1:27526493-27526512 | None:intergenic | 35.0% | |
| ATTGTGCTAGTAATGAGAAG+GGG | + | chr4_1:27526543-27526562 | None:intergenic | 35.0% | |
| CAATTGTGCTAGTAATGAGA+AGG | + | chr4_1:27526545-27526564 | None:intergenic | 35.0% | |
| CTTCTCATTACTAGCACAAT+TGG | - | chr4_1:27526543-27526562 | Msa0542470:CDS | 35.0% | |
| ACTGCTTGTTTGTTCTGTAT+GGG | - | chr4_1:27526570-27526589 | Msa0542470:CDS | 35.0% | |
| GTATCCAACGCAATTTCTTT+CGG | - | chr4_1:27526810-27526829 | Msa0542470:intron | 35.0% | |
| ACACTAGTACCTGAAACAAA+AGG | - | chr4_1:27526888-27526907 | Msa0542470:intron | 35.0% | |
| CACTAGTACCTGAAACAAAA+GGG | - | chr4_1:27526889-27526908 | Msa0542470:intron | 35.0% | |
| !! | AATGACTTCCCTTTTGTTTC+AGG | + | chr4_1:27526900-27526919 | None:intergenic | 35.0% |
| TGGAATGACAAAATCCATCA+GGG | + | chr4_1:27527057-27527076 | None:intergenic | 35.0% | |
| !!! | AATTTCTCTTGTTTTGTCCG+CGG | - | chr4_1:27527093-27527112 | Msa0542470:CDS | 35.0% |
| ACTCACATGGATATGATCTT+CGG | - | chr4_1:27527124-27527143 | Msa0542470:CDS | 35.0% | |
| TGGGACATGAGAAAAAACAA+AGG | - | chr4_1:27527172-27527191 | Msa0542470:five_prime_UTR | 35.0% | |
| !! | ATATGAACGGAGATTTTTGG+TGG | - | chr4_1:27527286-27527305 | Msa0542470:five_prime_UTR | 35.0% |
| AAATATCTCAAAGGACCATG+TGG | + | chr4_1:27527326-27527345 | None:intergenic | 35.0% | |
| !! | ACATGGTCCTTTGAGATATT+TGG | - | chr4_1:27527325-27527344 | Msa0542470:five_prime_UTR | 35.0% |
| CATATGAATTACATCCCTCA+TGG | + | chr4_1:27527391-27527410 | None:intergenic | 35.0% | |
| ! | TCTTTTTGTCACGCAAGCAA+TGG | + | chr4_1:27524966-27524985 | None:intergenic | 40.0% |
| ATTGCTTGCGTGACAAAAAG+AGG | - | chr4_1:27524965-27524984 | Msa0542470:three_prime_UTR | 40.0% | |
| TTGCTTGCGTGACAAAAAGA+GGG | - | chr4_1:27524966-27524985 | Msa0542470:three_prime_UTR | 40.0% | |
| ! | CATGACTTGGCAACAATAGA+GGG | + | chr4_1:27524996-27525015 | None:intergenic | 40.0% |
| ! | ACATGACTTGGCAACAATAG+AGG | + | chr4_1:27524997-27525016 | None:intergenic | 40.0% |
| ACAACCTTGTTCAGACACAA+AGG | - | chr4_1:27525133-27525152 | Msa0542470:three_prime_UTR | 40.0% | |
| CAAACCTTTGTGTCTGAACA+AGG | + | chr4_1:27525140-27525159 | None:intergenic | 40.0% | |
| ! | AATGGGGAAATGGGTTTATC+AGG | - | chr4_1:27525225-27525244 | Msa0542470:three_prime_UTR | 40.0% |
| GGTTTATCAGGAATTCCCTT+AGG | - | chr4_1:27525237-27525256 | Msa0542470:three_prime_UTR | 40.0% | |
| GCTGCAGTTGTATTCCAAAT+GGG | - | chr4_1:27525817-27525836 | Msa0542470:CDS | 40.0% | |
| GGAAGATTGTTAGCTGGAAT+TGG | - | chr4_1:27525886-27525905 | Msa0542470:CDS | 40.0% | |
| ! | GCTGGAATTGGAATAGGTTT+TGG | - | chr4_1:27525898-27525917 | Msa0542470:CDS | 40.0% |
| ! | GTATCCAATTACGCGTTTTC+CGG | - | chr4_1:27526030-27526049 | Msa0542470:CDS | 40.0% |
| TCCAACTTATGTGTACCGAA+AGG | + | chr4_1:27526056-27526075 | None:intergenic | 40.0% | |
| GCAAAACCAATGAACACTGA+AGG | + | chr4_1:27526105-27526124 | None:intergenic | 40.0% | |
| TTCTGCATTACCAACCATCT+CGG | + | chr4_1:27526150-27526169 | None:intergenic | 40.0% | |
| ATGAGAAAGAAGTGGAAGAG+AGG | - | chr4_1:27526214-27526233 | Msa0542470:CDS | 40.0% | |
| TGCCAATTCTGGTAAATACG+AGG | - | chr4_1:27526266-27526285 | Msa0542470:CDS | 40.0% | |
| GTCCTCGTATTTACCAGAAT+TGG | + | chr4_1:27526271-27526290 | None:intergenic | 40.0% | |
| ! | GACGGTCTTTGTTATACCTA+CGG | + | chr4_1:27526475-27526494 | None:intergenic | 40.0% |
| GACTGCTTGTTTGTTCTGTA+TGG | - | chr4_1:27526569-27526588 | Msa0542470:CDS | 40.0% | |
| !!! | GCATTTTTTTCGGTTGGACT+CGG | - | chr4_1:27526666-27526685 | Msa0542470:CDS | 40.0% |
| ATGTCAAAACCCAGCAAACA+GGG | + | chr4_1:27526692-27526711 | None:intergenic | 40.0% | |
| AAATTGCGTTGGATACAGAC+AGG | + | chr4_1:27526806-27526825 | None:intergenic | 40.0% | |
| CAACTTGTGCAGAACAAAAC+TGG | - | chr4_1:27526993-27527012 | Msa0542470:CDS | 40.0% | |
| AATCCATCAGGGTCGTATAA+AGG | + | chr4_1:27527046-27527065 | None:intergenic | 40.0% | |
| CTGGAATGACAAAATCCATC+AGG | + | chr4_1:27527058-27527077 | None:intergenic | 40.0% | |
| TCATTACAGTGTACTCCATG+AGG | - | chr4_1:27527373-27527392 | Msa0542470:five_prime_UTR | 40.0% | |
| CATTACAGTGTACTCCATGA+GGG | - | chr4_1:27527374-27527393 | Msa0542470:five_prime_UTR | 40.0% | |
| TTGCGTGACAAAAAGAGGGT+TGG | - | chr4_1:27524970-27524989 | Msa0542470:three_prime_UTR | 45.0% | |
| TCTCTATTGGGTAGTTTGGG+TGG | - | chr4_1:27525748-27525767 | Msa0542470:CDS | 45.0% | |
| GGCTGCAGTTGTATTCCAAA+TGG | - | chr4_1:27525816-27525835 | Msa0542470:CDS | 45.0% | |
| GCAGTTGTATTCCAAATGGG+TGG | - | chr4_1:27525820-27525839 | Msa0542470:CDS | 45.0% | |
| AGTGAGCCTCTAGTGAGATT+TGG | + | chr4_1:27525961-27525980 | None:intergenic | 45.0% | |
| ACTTATGTGTACCGAAAGGC+CGG | + | chr4_1:27526052-27526071 | None:intergenic | 45.0% | |
| GCCTTTCGGTACACATAAGT+TGG | - | chr4_1:27526052-27526071 | Msa0542470:CDS | 45.0% | |
| !! | TGGAGAGTAATGCTTGCTGT+TGG | - | chr4_1:27526072-27526091 | Msa0542470:CDS | 45.0% |
| CCGATCTTGCTTCGTCAATT+CGG | + | chr4_1:27526173-27526192 | None:intergenic | 45.0% | |
| CCGAATTGACGAAGCAAGAT+CGG | - | chr4_1:27526170-27526189 | Msa0542470:CDS | 45.0% | |
| GAGGCTAGCAGAAATACAAC+AGG | - | chr4_1:27526233-27526252 | Msa0542470:CDS | 45.0% | |
| CAAGACCAGTAATCAGCATC+CGG | + | chr4_1:27526338-27526357 | None:intergenic | 45.0% | |
| CCAGCGGCCATTAAAATTTC+TGG | + | chr4_1:27526414-27526433 | None:intergenic | 45.0% | |
| !! | CCAGAAATTTTAATGGCCGC+TGG | - | chr4_1:27526411-27526430 | Msa0542470:CDS | 45.0% |
| GGGCCATTAGTGATTGCATT+AGG | - | chr4_1:27526618-27526637 | Msa0542470:CDS | 45.0% | |
| GATGTCAAAACCCAGCAAAC+AGG | + | chr4_1:27526693-27526712 | None:intergenic | 45.0% | |
| ACAGGAAAGACATGGCTACA+AGG | + | chr4_1:27526788-27526807 | None:intergenic | 45.0% | |
| GGATACAGACAGGAAAGACA+TGG | + | chr4_1:27526796-27526815 | None:intergenic | 45.0% | |
| TCCAACGCAATTTCTTTCGG+CGG | - | chr4_1:27526813-27526832 | Msa0542470:intron | 45.0% | |
| TGAGAATGAACATGGGAGTC+AGG | - | chr4_1:27526941-27526960 | Msa0542470:intron | 45.0% | |
| GAGAATGAACATGGGAGTCA+GGG | - | chr4_1:27526942-27526961 | Msa0542470:CDS | 45.0% | |
| ATCAGGGTCGTATAAAGGTG+TGG | + | chr4_1:27527041-27527060 | None:intergenic | 45.0% | |
| ACACCTTTATACGACCCTGA+TGG | - | chr4_1:27527040-27527059 | Msa0542470:CDS | 45.0% | |
| CATGTGAGTGATTAAAGCCG+CGG | + | chr4_1:27527113-27527132 | None:intergenic | 45.0% | |
| CTATTGGGTAGTTTGGGTGG+TGG | - | chr4_1:27525751-27525770 | Msa0542470:CDS | 50.0% | |
| AAGGCCGGAAAACGCGTAAT+TGG | + | chr4_1:27526037-27526056 | None:intergenic | 50.0% | |
| ! | TTACGCGTTTTCCGGCCTTT+CGG | - | chr4_1:27526038-27526057 | Msa0542470:CDS | 50.0% |
| TTATTCCTGAGTCGCCGAGA+TGG | - | chr4_1:27526133-27526152 | Msa0542470:CDS | 50.0% | |
| GCAGAAATACAACAGGCTGC+TGG | - | chr4_1:27526240-27526259 | Msa0542470:CDS | 50.0% | |
| !!! | GCTGCTGGTTTTGCCAATTC+TGG | - | chr4_1:27526255-27526274 | Msa0542470:CDS | 50.0% |
| AATACGAGGACAAACCCGTG+TGG | - | chr4_1:27526280-27526299 | Msa0542470:CDS | 50.0% | |
| AGAGAGCAATTCACGCCACA+CGG | + | chr4_1:27526298-27526317 | None:intergenic | 50.0% | |
| ! | CGGATGCTGATTACTGGTCT+TGG | - | chr4_1:27526336-27526355 | Msa0542470:CDS | 50.0% |
| ACTCGGAGCTGTAGCGAATA+GGG | - | chr4_1:27526752-27526771 | Msa0542470:intron | 50.0% | |
| GTAGCGAATAGGGTTTGCAG+CGG | - | chr4_1:27526762-27526781 | Msa0542470:intron | 50.0% | |
| CCAACGCAATTTCTTTCGGC+GGG | - | chr4_1:27526814-27526833 | Msa0542470:intron | 50.0% | |
| TGGGAGTCAGGGAAAAGAGA+TGG | - | chr4_1:27526953-27526972 | Msa0542470:CDS | 50.0% | |
| CAGGGAAAAGAGATGGAGCT+AGG | - | chr4_1:27526960-27526979 | Msa0542470:CDS | 50.0% | |
| ! | CGCGGCTTTAATCACTCACA+TGG | - | chr4_1:27527111-27527130 | Msa0542470:CDS | 50.0% |
| GAGATGATCCTGTCTCCACA+TGG | - | chr4_1:27527308-27527327 | Msa0542470:five_prime_UTR | 50.0% | |
| TCAAAGGACCATGTGGAGAC+AGG | + | chr4_1:27527319-27527338 | None:intergenic | 50.0% | |
| GCAGATGTGGGTGTGATGAG+TGG | - | chr4_1:27525646-27525665 | Msa0542470:CDS | 55.0% | |
| GAGAGCAATTCACGCCACAC+GGG | + | chr4_1:27526297-27526316 | None:intergenic | 55.0% | |
| TGAATTGCTCTCTCCGCCAC+CGG | - | chr4_1:27526305-27526324 | Msa0542470:CDS | 55.0% | |
| ! | CTTCGCCGGATGCTGATTAC+TGG | - | chr4_1:27526330-27526349 | Msa0542470:CDS | 55.0% |
| CTAGCTGCTACTGTTGCCGT+AGG | - | chr4_1:27526456-27526475 | Msa0542470:CDS | 55.0% | |
| CCTGAGCACGCACTCGTAAA+GGG | + | chr4_1:27526725-27526744 | None:intergenic | 55.0% | |
| CACTCGGAGCTGTAGCGAAT+AGG | - | chr4_1:27526751-27526770 | Msa0542470:intron | 55.0% | |
| CCCGCCGAAAGAAATTGCGT+TGG | + | chr4_1:27526817-27526836 | None:intergenic | 55.0% | |
| TCCTGAGTCGCCGAGATGGT+TGG | - | chr4_1:27526137-27526156 | Msa0542470:CDS | 60.0% | |
| ACCAACCATCTCGGCGACTC+AGG | + | chr4_1:27526141-27526160 | None:intergenic | 60.0% | |
| TTGGACTCGGCCCTGTTTGC+TGG | - | chr4_1:27526679-27526698 | Msa0542470:CDS | 60.0% | |
| TGGACTCGGCCCTGTTTGCT+GGG | - | chr4_1:27526680-27526699 | Msa0542470:CDS | 60.0% | |
| CCCTTTACGAGTGCGTGCTC+AGG | - | chr4_1:27526722-27526741 | Msa0542470:intron | 60.0% | |
| GCCTGAGCACGCACTCGTAA+AGG | + | chr4_1:27526726-27526745 | None:intergenic | 60.0% | |
| CGTGCTCAGGCATCTGCACT+CGG | - | chr4_1:27526735-27526754 | Msa0542470:intron | 60.0% | |
| ATCAGCATCCGGCGAAGCGC+CGG | + | chr4_1:27526327-27526346 | None:intergenic | 65.0% | |
| !! | ATCCGGCGAAGCGCCGGTGG+CGG | + | chr4_1:27526321-27526340 | None:intergenic | 75.0% |
| !! | AGCATCCGGCGAAGCGCCGG+TGG | + | chr4_1:27526324-27526343 | None:intergenic | 75.0% |
| ! | CTCCGCCACCGGCGCTTCGC+CGG | - | chr4_1:27526316-27526335 | Msa0542470:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 27524908 | 27527451 | 27524908 | ID=Msa0542470;Name=Msa0542470 |
| chr4_1 | mRNA | 27524908 | 27527451 | 27524908 | ID=Msa0542470-mRNA-1;Parent=Msa0542470;Name=Msa0542470-mRNA-1;_AED=0.00;_eAED=0.00;_QI=296|1|1|1|1|1|2|423|530 |
| chr4_1 | exon | 27524908 | 27526709 | 27524908 | ID=Msa0542470-mRNA-1:exon:7434;Parent=Msa0542470-mRNA-1 |
| chr4_1 | exon | 27526942 | 27527451 | 27526942 | ID=Msa0542470-mRNA-1:exon:7433;Parent=Msa0542470-mRNA-1 |
| chr4_1 | five_prime_UTR | 27527156 | 27527451 | 27527156 | ID=Msa0542470-mRNA-1:five_prime_utr;Parent=Msa0542470-mRNA-1 |
| chr4_1 | CDS | 27526942 | 27527155 | 27526942 | ID=Msa0542470-mRNA-1:cds;Parent=Msa0542470-mRNA-1 |
| chr4_1 | CDS | 27525331 | 27526709 | 27525331 | ID=Msa0542470-mRNA-1:cds;Parent=Msa0542470-mRNA-1 |
| chr4_1 | three_prime_UTR | 27524908 | 27525330 | 27524908 | ID=Msa0542470-mRNA-1:three_prime_utr;Parent=Msa0542470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
