AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0646400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0646400 MtrunA17_Chr4g0034491 89.724 652 31 3 1 625 1 643 0.0 1189
Msa0646400 MtrunA17_Chr4g0019701 59.197 299 78 7 6 269 6 295 3.09e-95 310
Msa0646400 MtrunA17_Chr4g0019701 37.021 235 114 9 395 625 466 670 6.31e-27 116
Msa0646400 MtrunA17_Chr4g0067151 30.350 257 155 13 13 253 73 321 2.24e-20 92.8
Msa0646400 MtrunA17_Chr8g0392701 28.866 291 168 14 10 281 7 277 7.91e-16 79.0
Msa0646400 MtrunA17_Chr1g0185501 29.457 258 156 13 13 253 64 312 7.97e-15 75.9
Msa0646400 MtrunA17_Chr2g0281451 28.889 180 118 7 84 253 32 211 4.49e-14 75.9
Msa0646400 MtrunA17_Chr6g0448921 28.177 181 120 7 83 253 32 212 5.71e-14 75.5
Msa0646400 MtrunA17_Chr1g0172501 33.854 192 107 8 34 214 371 553 9.53e-14 74.3
Msa0646400 MtrunA17_Chr3g0093681 33.854 192 107 8 34 214 371 553 1.69e-13 73.6
Msa0646400 MtrunA17_Chr3g0093681 27.273 253 165 11 14 255 310 554 2.92e-12 69.7
Msa0646400 MtrunA17_Chr8g0390861 28.033 239 156 8 30 260 880 1110 3.60e-13 73.2
Msa0646400 MtrunA17_Chr8g0390861 27.481 262 155 9 81 334 882 1116 8.70e-13 72.0
Msa0646400 MtrunA17_Chr4g0059031 27.099 262 163 10 14 253 398 653 4.28e-13 72.8
Msa0646400 MtrunA17_Chr2g0295791 24.254 268 178 10 4 254 198 457 5.50e-13 71.6
Msa0646400 MtrunA17_Chr2g0295791 27.027 259 167 11 5 253 160 406 4.32e-11 65.9
Msa0646400 MtrunA17_Chr1g0148791 25.424 236 149 8 34 254 679 902 1.28e-12 71.2
Msa0646400 MtrunA17_Chr5g0405851 32.812 192 109 8 34 214 268 450 1.55e-12 70.1
Msa0646400 MtrunA17_Chr5g0405851 27.731 238 153 11 31 257 224 453 3.15e-11 66.2
Msa0646400 MtrunA17_Chr2g0331981 29.688 192 116 9 34 213 72 256 4.31e-12 69.7
Msa0646400 MtrunA17_Chr4g0053651 27.799 259 153 11 29 265 299 545 5.42e-12 68.9
Msa0646400 MtrunA17_Chr8g0381281 31.953 169 92 6 109 259 211 374 8.56e-12 67.8
Msa0646400 MtrunA17_Chr3g0138311 25.974 231 150 8 34 254 678 897 9.32e-12 68.6
Msa0646400 MtrunA17_Chr2g0285951 26.442 208 124 8 17 204 29 227 5.04e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0646400 AT3G18860.1 61.433 656 211 6 1 625 3 647 0.0 846
Msa0646400 AT3G18860.2 61.433 656 211 6 1 625 3 647 0.0 845
Msa0646400 AT3G49660.1 30.196 255 156 12 13 253 66 312 7.14e-24 103
Msa0646400 AT3G49660.1 27.206 272 181 9 5 262 11 279 6.53e-13 70.5
Msa0646400 AT4G02730.1 28.409 264 166 12 7 254 74 330 6.43e-18 85.9
Msa0646400 AT1G49040.1 25.818 275 180 11 4 267 925 1186 6.39e-15 79.3
Msa0646400 AT1G49040.1 28.870 239 154 8 30 260 866 1096 1.41e-14 78.2
Msa0646400 AT4G32551.2 27.948 229 152 6 34 254 746 969 7.16e-15 79.0
Msa0646400 AT4G32551.1 27.948 229 152 6 34 254 708 931 9.24e-15 78.6
Msa0646400 AT1G48630.1 27.431 288 172 13 10 279 7 275 4.18e-14 74.3
Msa0646400 AT2G41500.1 29.004 231 145 11 34 253 313 535 7.11e-14 75.1
Msa0646400 AT2G41500.2 29.004 231 145 11 34 253 313 535 7.11e-14 75.1
Msa0646400 AT3G18130.1 27.431 288 172 13 10 279 7 275 2.02e-13 72.4
Msa0646400 AT5G23430.3 28.729 181 119 7 83 253 32 212 3.47e-13 73.6
Msa0646400 AT5G23430.2 28.729 181 119 7 83 253 32 212 3.47e-13 73.6
Msa0646400 AT5G23430.1 28.729 181 119 7 83 253 32 212 3.59e-13 73.6
Msa0646400 AT1G52360.4 29.167 192 117 9 34 213 72 256 2.71e-12 70.5
Msa0646400 AT1G52360.1 29.167 192 117 9 34 213 72 256 2.71e-12 70.5
Msa0646400 AT1G18080.1 27.931 290 169 15 10 279 7 276 2.83e-12 68.9
Msa0646400 AT1G52360.2 29.167 192 117 9 34 213 116 300 2.95e-12 70.5
Msa0646400 AT1G52360.3 29.167 192 117 9 34 213 72 256 3.12e-12 70.5
Msa0646400 AT3G15980.1 28.646 192 118 9 34 213 72 256 4.16e-12 70.1
Msa0646400 AT3G15980.7 28.646 192 118 9 34 213 72 256 4.62e-12 69.7
Msa0646400 AT3G15980.5 28.646 192 118 9 34 213 72 256 4.82e-12 69.7
Msa0646400 AT3G15980.3 28.646 192 118 9 34 213 72 256 4.92e-12 69.7
Msa0646400 AT3G15980.6 28.646 192 118 9 34 213 72 256 4.92e-12 69.7
Msa0646400 AT3G15980.2 28.646 192 118 9 34 213 72 256 4.92e-12 69.7
Msa0646400 AT3G15980.4 28.646 192 118 9 34 213 72 256 4.92e-12 69.7
Msa0646400 AT5G52820.1 28.216 241 128 8 59 254 190 430 8.46e-12 68.2
Msa0646400 AT1G24530.1 32.143 168 91 6 109 258 194 356 1.01e-11 67.8
Msa0646400 AT1G61210.3 27.222 180 121 7 84 253 32 211 1.19e-11 68.6
Msa0646400 AT5G51980.1 27.881 269 163 10 6 264 139 386 1.35e-11 67.4
Msa0646400 AT5G51980.2 27.881 269 163 10 6 264 139 386 1.35e-11 67.4
Msa0646400 AT2G32700.2 23.913 230 157 9 34 254 567 787 1.44e-11 68.2
Msa0646400 AT2G32700.5 23.913 230 157 9 34 254 567 787 1.44e-11 68.2
Msa0646400 AT2G32700.1 23.913 230 157 9 34 254 567 787 1.44e-11 68.2
Msa0646400 AT2G32700.4 23.913 230 157 9 34 254 567 787 1.44e-11 68.2
Msa0646400 AT2G32700.3 23.913 230 157 9 34 254 567 787 1.44e-11 68.2
Msa0646400 AT2G32700.7 23.913 230 157 9 34 254 586 806 1.47e-11 68.2
Msa0646400 AT2G32700.6 23.913 230 157 9 34 254 565 785 1.55e-11 68.2
Msa0646400 AT1G61210.2 27.222 180 121 7 84 253 32 211 1.60e-11 68.2
Msa0646400 AT1G61210.1 27.222 180 121 7 84 253 32 211 1.67e-11 68.2
Msa0646400 AT5G67320.1 28.195 266 155 11 29 271 334 586 1.72e-11 67.8
Msa0646400 AT1G49040.3 28.324 173 101 5 103 253 836 1007 2.36e-11 67.8
Msa0646400 AT1G79990.2 31.361 169 99 8 57 213 93 256 3.28e-11 67.0
Msa0646400 AT1G79990.1 31.361 169 99 8 57 213 93 256 3.40e-11 67.0
Msa0646400 AT1G11160.2 26.519 181 123 7 83 253 31 211 5.72e-11 66.2
Msa0646400 AT1G11160.4 26.519 181 123 7 83 253 31 211 5.73e-11 66.2
Msa0646400 AT1G11160.1 26.519 181 123 7 83 253 31 211 6.51e-11 66.2
Msa0646400 AT4G15900.1 24.609 256 165 10 10 258 210 444 9.05e-11 65.1

Find 161 sgRNAs with CRISPR-Local

Find 644 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGGAATCGTTGGGTTTA+TGG 0.150998 4_3:-52161731 None:intergenic
ACTACAGTTCTCTGAGATTA+TGG 0.176090 4_3:+52155013 Msa0646400:intron
CCACACGGTGGTGTTGTTTC+TGG 0.196876 4_3:+52153097 Msa0646400:CDS
TTCAGATTCTGCAAATTTAC+TGG 0.225599 4_3:-52160758 None:intergenic
GAGGGTTGGAGGATTGAAAT+TGG 0.276314 4_3:+52156999 Msa0646400:CDS
CATATGATGCTGCTGATAAA+TGG 0.284265 4_3:+52158543 Msa0646400:CDS
GAGAAGGTGCAGAGTCTTAA+AGG 0.307254 4_3:+52153163 Msa0646400:CDS
GGATACTCTTGTGTTGGTTT+GGG 0.310737 4_3:+52153126 Msa0646400:CDS
CGTGAAGTTCACAGCGTAAT+TGG 0.317010 4_3:-52152886 None:intergenic
GCAGCATCATATGCATTATC+TGG 0.317885 4_3:-52158533 None:intergenic
GATGGTGTTCAGTATGATTA+TGG 0.317950 4_3:+52157446 Msa0646400:CDS
TGGATACTCTTGTGTTGGTT+TGG 0.324878 4_3:+52153125 Msa0646400:CDS
GGTCATCAATTGCAGGTTAC+TGG 0.336331 4_3:+52153184 Msa0646400:CDS
TTTGATACTGCTCAATTTGA+TGG 0.343640 4_3:+52159816 Msa0646400:CDS
AGAGGGCGATTTGATTCTTC+AGG 0.345151 4_3:-52157419 None:intergenic
TTGGAGATGGTATGCCTATC+AGG 0.348798 4_3:+52157572 Msa0646400:CDS
ACACCACCGTGTGGCAAATC+AGG 0.349373 4_3:-52153088 None:intergenic
AGTAAGTGGTGAAGTGTTAA+TGG 0.353713 4_3:+52155038 Msa0646400:CDS
CCGATGGAATTGTACGCATT+TGG 0.355425 4_3:+52156593 Msa0646400:CDS
CCCACAGGAGAGCTTGTTAC+AGG 0.356136 4_3:+52154292 Msa0646400:CDS
GCCAACCTGGTCGGACAATA+AGG 0.358836 4_3:-52159871 None:intergenic
ACGCATTTGGACTGTAAATC+AGG 0.364122 4_3:+52156606 Msa0646400:CDS
TCAGTGTTTGATGTGGATAT+TGG 0.367485 4_3:+52157553 Msa0646400:intron
CTGAATAAACAATTGCAGTA+TGG 0.377369 4_3:-52155071 None:intergenic
TGAAGTGCAATAGCCCCGTC+TGG 0.377385 4_3:-52161031 None:intergenic
TTTGTACCTGATCGGTTGTA+TGG 0.382114 4_3:-52157601 None:intergenic
AGAATTCATGCTTCTACAAC+TGG 0.385701 4_3:+52161794 Msa0646400:CDS
CTACAGTTCTCTGAGATTAT+GGG 0.388543 4_3:+52155014 Msa0646400:intron
CCAACCACAATGATATTTCC+TGG 0.389390 4_3:+52160814 Msa0646400:CDS
TACTGAATATGCTATCTTCA+TGG 0.394037 4_3:+52160791 Msa0646400:CDS
GGAACATGGCAGAACAGAAA+TGG 0.394356 4_3:+52157254 Msa0646400:CDS
TTGTTTCATCTTCTATTGAT+TGG 0.400975 4_3:+52153230 Msa0646400:CDS
TTGAAGAAGCAAAGGACTTT+GGG 0.402515 4_3:+52152787 Msa0646400:five_prime_UTR
CAGTTCATACTTCAAAATAC+TGG 0.403359 4_3:+52158611 Msa0646400:CDS
ATTTCTTGTGTAGTACTTTG+AGG 0.407655 4_3:+52154197 Msa0646400:intron
GTCTTGAACAAGGTTCTTGT+AGG 0.407719 4_3:+52153022 Msa0646400:CDS
GCATGAATTCTTAAAGAGAT+TGG 0.411971 4_3:-52161782 None:intergenic
GTTGAAGAAGCAAAGGACTT+TGG 0.412470 4_3:+52152786 Msa0646400:five_prime_UTR
ATACTAGTCAACAGATTTGC+AGG 0.427032 4_3:-52161748 None:intergenic
TCAGTTGATTCACATGCATC+AGG 0.432496 4_3:+52155090 Msa0646400:CDS
TGTGTAGTACTTTGAGGAGG+TGG 0.434586 4_3:+52154203 Msa0646400:intron
TTGAAATTGGAGGAGTTACC+AGG 0.436590 4_3:+52157012 Msa0646400:CDS
TTGGCTGTGATGTCTGATCT+TGG 0.438344 4_3:+52154867 Msa0646400:CDS
TTTCTCAATACAAGTCTAGT+AGG 0.439387 4_3:+52156674 Msa0646400:CDS
CTTTGAGGAGGTGGAGGAAT+GGG 0.444827 4_3:+52154212 Msa0646400:CDS
TTTAACAGTGGCATCCAGTC+TGG 0.451429 4_3:-52160707 None:intergenic
TTATAAACTTTAAATAATCC+AGG 0.452223 4_3:-52161881 None:intergenic
AAGATTGGTGAAGTTGTTGA+TGG 0.453927 4_3:+52157395 Msa0646400:intron
TTGTATGGCAACTTCCTGAT+AGG 0.456527 4_3:-52157586 None:intergenic
TTCCGCGAACGTCGTCTTCG+TGG 0.457119 4_3:-52152910 None:intergenic
GTGACAAAACGGTTAGGTTA+TGG 0.457307 4_3:+52152978 Msa0646400:CDS
TCAGCCAATGCTTACGTACC+AGG 0.458333 4_3:+52158791 Msa0646400:intron
ATTGGAGGAGTTACCAGGCT+TGG 0.459142 4_3:+52157017 Msa0646400:CDS
AACAGATTTGCAGGAATCGT+TGG 0.461890 4_3:-52161739 None:intergenic
TACAGATACTGTTCGTGGCT+TGG 0.462670 4_3:+52154848 Msa0646400:intron
ACAGATTTGCAGGAATCGTT+GGG 0.462737 4_3:-52161738 None:intergenic
GGTCAACCTTCTCGCACATC+TGG 0.462896 4_3:+52158812 Msa0646400:CDS
TATGCTAGAAAGAGGGTTGG+AGG 0.463864 4_3:+52156988 Msa0646400:intron
GAAGTTGTCTTTGACCGAGT+TGG 0.465297 4_3:+52160678 Msa0646400:CDS
GCCGTTGTCGCCGCCGCAGA+TGG 0.466421 4_3:-52152936 None:intergenic
CAATTACGCTGTGAACTTCA+CGG 0.469838 4_3:+52152887 Msa0646400:CDS
AGCTTTATAACTGCTTGAAT+CGG 0.476468 4_3:-52154268 None:intergenic
TCTTAAAGGTCATCAATTGC+AGG 0.479911 4_3:+52153177 Msa0646400:CDS
ACTGGTATTGTGGTTGATGA+TGG 0.480401 4_3:+52153202 Msa0646400:CDS
TTCGGTGGAATCCATGATAT+AGG 0.482787 4_3:-52153064 None:intergenic
TGGTAGTTCTTCACCCAGAC+GGG 0.485076 4_3:+52161017 Msa0646400:CDS
AACTTCATCGCGTGACAAAA+CGG 0.488695 4_3:+52152967 Msa0646400:CDS
TGGCATGGATACTCTTGTGT+TGG 0.488991 4_3:+52153120 Msa0646400:CDS
GTTGTCAGAGAGGGAGATAA+CGG 0.489482 4_3:+52157217 Msa0646400:CDS
TTAGGAATATGCTTGAAAGT+AGG 0.492360 4_3:-52158959 None:intergenic
TTGATACTGCTCAATTTGAT+GGG 0.492366 4_3:+52159817 Msa0646400:CDS
CCGTGTGGCAAATCAGGGTT+CGG 0.498948 4_3:-52153082 None:intergenic
GAACATGGCAGAACAGAAAT+GGG 0.499199 4_3:+52157255 Msa0646400:CDS
CTCTCTCGCTCTCTCTAGAA+TGG 0.502896 4_3:+52152844 Msa0646400:exon
TCCTATCTGCATCTCATGAT+GGG 0.503124 4_3:+52154892 Msa0646400:CDS
TACTTTCAAGCATATTCCTA+AGG 0.508389 4_3:+52158961 Msa0646400:CDS
ATCCTATCTGCATCTCATGA+TGG 0.509522 4_3:+52154891 Msa0646400:CDS
ATCTTCAGTGTATCCAAGCC+TGG 0.510656 4_3:-52157030 None:intergenic
TTGGTTTGGGACTTGAATAG+TGG 0.519590 4_3:+52153139 Msa0646400:CDS
ATTTATGCTAGAAAGAGGGT+TGG 0.520811 4_3:+52156985 Msa0646400:intron
ACCCATCATGAGATGCAGAT+AGG 0.520890 4_3:-52154893 None:intergenic
TGTATAAATCAAGCTCTAGC+TGG 0.521315 4_3:-52156642 None:intergenic
AGAGACATGGGAGGCTCACA+AGG 0.527540 4_3:+52154243 Msa0646400:CDS
ACCATCTGCGGCGGCGACAA+CGG 0.529117 4_3:+52152935 Msa0646400:CDS
GTAGTACTTTGAGGAGGTGG+AGG 0.537286 4_3:+52154206 Msa0646400:intron
TGTTCAGTATGATTATGGTC+AGG 0.542089 4_3:+52157451 Msa0646400:CDS
CATCGCGTGACAAAACGGTT+AGG 0.543736 4_3:+52152972 Msa0646400:CDS
ACTTTGAGGAGGTGGAGGAA+TGG 0.546137 4_3:+52154211 Msa0646400:CDS
AAGTTGCCATACAACCGATC+AGG 0.546615 4_3:+52157595 Msa0646400:CDS
TGGTGTTGTTTCTGGTGGCA+TGG 0.553218 4_3:+52153105 Msa0646400:CDS
GTTAATTTATGCTAGAAAGA+GGG 0.556604 4_3:+52156981 Msa0646400:intron
GGTTGGAGGATTGAAATTGG+AGG 0.557821 4_3:+52157002 Msa0646400:CDS
TGGTGAAGTGTTAATGGAGA+TGG 0.558610 4_3:+52155044 Msa0646400:CDS
TCAAATCGCCCTCTCTTCGA+TGG 0.558656 4_3:+52157428 Msa0646400:CDS
ACCTGTAACAAGCTCTCCTG+TGG 0.558940 4_3:-52154293 None:intergenic
TTGTACTTACAGCCGGTGTA+CGG 0.561463 4_3:-52158671 None:intergenic
TCGCAAATTCGTCTTGAACA+AGG 0.562186 4_3:+52153012 Msa0646400:CDS
TTGGATACACTGAAGATCCC+AGG 0.564786 4_3:+52157036 Msa0646400:CDS
ATTGCAGGTTACTGGTATTG+TGG 0.567738 4_3:+52153192 Msa0646400:CDS
GAAGGAGGTTGAAGAAGCAA+AGG 0.570201 4_3:+52152779 Msa0646400:five_prime_UTR
CAATAAGGCATTATTGAACT+CGG 0.570749 4_3:-52159856 None:intergenic
AAGAGAATATATAGGGAAGG+AGG 0.570937 4_3:+52152764 None:intergenic
CCAGGAAATATCATTGTGGT+TGG 0.571275 4_3:-52160814 None:intergenic
CTGAGATTATGGGCAGTAAG+TGG 0.572984 4_3:+52155024 Msa0646400:CDS
ATAACGGAGTTGCGTATGCA+TGG 0.573334 4_3:+52157233 Msa0646400:CDS
GGCCACGAAGACGACGTTCG+CGG 0.576951 4_3:+52152908 Msa0646400:CDS
GAAGCAAAGGACTTTGGGTA+AGG 0.577694 4_3:+52152792 Msa0646400:five_prime_UTR
CACGGTGGTGTTGTTTCTGG+TGG 0.577915 4_3:+52153100 Msa0646400:CDS
ACTTGCTCACGAAAAGAAAG+AGG 0.579161 4_3:-52158584 None:intergenic
TAATGCCTTATTGTCCGACC+AGG 0.582133 4_3:+52159866 Msa0646400:CDS
TGGCTATTCAGTGTTTGATG+TGG 0.585313 4_3:+52157546 Msa0646400:intron
CACCACCGTGTGGCAAATCA+GGG 0.586231 4_3:-52153087 None:intergenic
ATGCAGTAATTGATATTACA+AGG 0.586946 4_3:+52160993 Msa0646400:intron
CCGAACCCTGATTTGCCACA+CGG 0.587140 4_3:+52153082 Msa0646400:CDS
AGTAATTGATATTACAAGGA+TGG 0.590314 4_3:+52160997 Msa0646400:intron
TTGACCTGGTACGTAAGCAT+TGG 0.590773 4_3:-52158795 None:intergenic
ATGGGCAATGCATAGAGACA+TGG 0.594108 4_3:+52154230 Msa0646400:CDS
CGAGTTGGATGTTACCAGAC+TGG 0.596114 4_3:+52160693 Msa0646400:CDS
GAATGTACAGATACTGTTCG+TGG 0.597426 4_3:+52154843 Msa0646400:intron
GAAGTGCAATAGCCCCGTCT+GGG 0.600322 4_3:-52161030 None:intergenic
TGCTGATAAATGGCTACTCA+AGG 0.601467 4_3:+52158553 Msa0646400:CDS
TAATTACCAGATGTGCGAGA+AGG 0.603021 4_3:-52158818 None:intergenic
TCATTTCGTGATCCGTACAC+CGG 0.603848 4_3:+52158659 Msa0646400:CDS
CAGTCTGGTAACATCCAACT+CGG 0.605191 4_3:-52160692 None:intergenic
ATCTGCGGCGGCGACAACGG+CGG 0.605668 4_3:+52152938 Msa0646400:CDS
TTGTGAACAGGAACTTCTGA+TGG 0.608359 4_3:+52157184 Msa0646400:intron
CCAAACAAAAGTTGTCAGAG+AGG 0.608732 4_3:+52157207 Msa0646400:CDS
ACTGAACACCATCGAAGAGA+GGG 0.608786 4_3:-52157436 None:intergenic
ATGGTAGTTCTTCACCCAGA+CGG 0.609330 4_3:+52161016 Msa0646400:CDS
GTGACACTACTTTAAAGACC+TGG 0.611314 4_3:+52154456 Msa0646400:CDS
TGATAAATGGCTACTCAAGG+AGG 0.613548 4_3:+52158556 Msa0646400:CDS
CCAAATGCGTACAATTCCAT+CGG 0.619764 4_3:-52156593 None:intergenic
AGATAGCATATTCAGTAGCA+AGG 0.619959 4_3:-52160785 None:intergenic
TCTTGTGTAGTACTTTGAGG+AGG 0.621080 4_3:+52154200 Msa0646400:intron
CAAACAAAAGTTGTCAGAGA+GGG 0.623484 4_3:+52157208 Msa0646400:CDS
TTTGATGTGGATATTGGAGA+TGG 0.624587 4_3:+52157559 Msa0646400:CDS
CCTGTAACAAGCTCTCCTGT+GGG 0.625764 4_3:-52154292 None:intergenic
TGGGCAATGCATAGAGACAT+GGG 0.626538 4_3:+52154231 Msa0646400:CDS
TACTGAACACCATCGAAGAG+AGG 0.628823 4_3:-52157437 None:intergenic
TGTGGCAAATCAGGGTTCGG+TGG 0.629930 4_3:-52153079 None:intergenic
ATTGTGACAGCATGTTCCGA+TGG 0.630884 4_3:+52156577 Msa0646400:intron
GGACTTGAATAGTGGTGAGA+AGG 0.631251 4_3:+52153147 Msa0646400:CDS
ACTACTTTAAAGACCTGGAA+GGG 0.635641 4_3:+52154461 Msa0646400:CDS
GATAAATGGCTACTCAAGGA+GGG 0.639126 4_3:+52158557 Msa0646400:CDS
GCAGTTATAAAGCTACCCAC+AGG 0.640686 4_3:+52154277 Msa0646400:CDS
CACTACTTTAAAGACCTGGA+AGG 0.647189 4_3:+52154460 Msa0646400:CDS
GCATCAGGACTTATTGTCAG+TGG 0.647307 4_3:+52155105 Msa0646400:CDS
CGCGGAATAACCATCTGCGG+CGG 0.647933 4_3:+52152926 Msa0646400:CDS
AGTTGCGTATGCATGGAACA+TGG 0.650590 4_3:+52157240 Msa0646400:CDS
GAGACATGGGAGGCTCACAA+GGG 0.670228 4_3:+52154244 Msa0646400:CDS
GGTAGTTCTTCACCCAGACG+GGG 0.683360 4_3:+52161018 Msa0646400:CDS
GATGTGCGAGAAGGTTGACC+TGG 0.684233 4_3:-52158809 None:intergenic
AATCATGTAGCCAACCTGGT+CGG 0.685199 4_3:-52159880 None:intergenic
AGACATGGGAGGCTCACAAG+GGG 0.691916 4_3:+52154245 Msa0646400:CDS
AACCCTGATTTGCCACACGG+TGG 0.695182 4_3:+52153085 Msa0646400:CDS
CTAACCAGGAAATATCATTG+TGG 0.698335 4_3:-52160818 None:intergenic
GTTCGCGGAATAACCATCTG+CGG 0.717853 4_3:+52152923 Msa0646400:CDS
CCAGAAACAACACCACCGTG+TGG 0.726363 4_3:-52153097 None:intergenic
GAAGTGTTAATGGAGATGGT+TGG 0.733230 4_3:+52155048 Msa0646400:CDS
GTTGCAGAAGCATCGCAGTG+AGG 0.742648 4_3:+52161816 Msa0646400:CDS
GCAATGCATAGAGACATGGG+AGG 0.774744 4_3:+52154234 Msa0646400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATAAGAAAAAGAAAA+TGG + chr4_3:52155538-52155557 Msa0646400:intron 10.0%
!!! TTTATTTTTATCAAATGTAA+GGG + chr4_3:52156117-52156136 Msa0646400:intron 10.0%
!! TATTTATATTCTCACATATT+AGG + chr4_3:52154428-52154447 Msa0646400:intron 15.0%
!!! ACTTTGTTTTCTTTATATTT+TGG + chr4_3:52154645-52154664 Msa0646400:intron 15.0%
!! TCAATATTTATTAAATCTAG+AGG - chr4_3:52154940-52154959 None:intergenic 15.0%
!!! CTTTATTTTTATCAAATGTA+AGG + chr4_3:52156116-52156135 Msa0646400:intron 15.0%
!!! ACTTTATTTATGTTTTTGTT+GGG + chr4_3:52156140-52156159 Msa0646400:intron 15.0%
!!! ATTTTTATAAATGTTATCCA+TGG + chr4_3:52156289-52156308 Msa0646400:intron 15.0%
!! ATACAAAATTTATGGAAAAT+GGG + chr4_3:52156551-52156570 Msa0646400:intron 15.0%
!! TTTAAAAACAAAACAAAAAC+AGG - chr4_3:52156889-52156908 None:intergenic 15.0%
!!! ACTGTAAAATCTTTTATATT+TGG - chr4_3:52157343-52157362 None:intergenic 15.0%
!!! AATATAAAAGATTTTACAGT+CGG + chr4_3:52157343-52157362 Msa0646400:intron 15.0%
!!! AATTATTTTTTCCTAAAGAT+TGG + chr4_3:52157380-52157399 Msa0646400:intron 15.0%
!!! ATTCTAATAAAGTTTACTTT+TGG + chr4_3:52157526-52157545 Msa0646400:intron 15.0%
!! GTTGAAAAAATGAATTTATA+TGG + chr4_3:52157726-52157745 Msa0646400:intron 15.0%
!! ACAAAAATTTATAATCTGAT+TGG + chr4_3:52159241-52159260 Msa0646400:intron 15.0%
!!! CAGTAATTATTTTTATAAGA+TGG + chr4_3:52159523-52159542 Msa0646400:intron 15.0%
!! TGTAATATGTAATGTTAAAA+CGG + chr4_3:52159940-52159959 Msa0646400:intron 15.0%
!!! TATTTCTAAAAAAATCTGTT+TGG + chr4_3:52160069-52160088 Msa0646400:intron 15.0%
!!! GGTTTATATTTTATATCAAA+GGG - chr4_3:52160468-52160487 None:intergenic 15.0%
!! ATAAAATAAATTTGATCCAA+TGG - chr4_3:52160894-52160913 None:intergenic 15.0%
!!! AAACCATAAAAAAAGTTTTA+AGG + chr4_3:52161508-52161527 Msa0646400:intron 15.0%
!!! TACAGGTATTTATACATTTT+CGG + chr4_3:52154309-52154328 Msa0646400:intron 20.0%
!!! ATTTTGTCATCGATTTATAA+TGG + chr4_3:52154558-52154577 Msa0646400:intron 20.0%
!!! ATAGCTTATAGTTTTTTGTT+TGG + chr4_3:52154581-52154600 Msa0646400:intron 20.0%
!!! CTTATTTCTATTTTATATCG+AGG + chr4_3:52155481-52155500 Msa0646400:intron 20.0%
!! ATATCCATGGATAAAATAAA+CGG + chr4_3:52155823-52155842 Msa0646400:intron 20.0%
!! GGTTATTTATGTAATTTACT+CGG - chr4_3:52155933-52155952 None:intergenic 20.0%
!!! GACTTTATTTATGTTTTTGT+TGG + chr4_3:52156139-52156158 Msa0646400:intron 20.0%
!! TAGGTAAAATTTAGAAACAA+AGG - chr4_3:52156241-52156260 None:intergenic 20.0%
!! GATACAAAATTTATGGAAAA+TGG + chr4_3:52156550-52156569 Msa0646400:intron 20.0%
!! TACAAAATTTATGGAAAATG+GGG + chr4_3:52156552-52156571 Msa0646400:intron 20.0%
!! AAAATGAAATCAGTTATTCA+CGG - chr4_3:52156824-52156843 None:intergenic 20.0%
!!! AATAACTGATTTCATTTTCT+TGG + chr4_3:52156826-52156845 Msa0646400:intron 20.0%
!!! ATAACTGATTTCATTTTCTT+GGG + chr4_3:52156827-52156846 Msa0646400:intron 20.0%
!! AATTATCAACACAATACAAA+AGG - chr4_3:52157137-52157156 None:intergenic 20.0%
!! AAATGAATTTATATGGTCTT+TGG + chr4_3:52157733-52157752 Msa0646400:intron 20.0%
!! AATGAATTTATATGGTCTTT+GGG + chr4_3:52157734-52157753 Msa0646400:intron 20.0%
!!! ATATTCTGAAAATGAACTTT+TGG + chr4_3:52157882-52157901 Msa0646400:intron 20.0%
!!! TATTCTGAAAATGAACTTTT+GGG + chr4_3:52157883-52157902 Msa0646400:intron 20.0%
!! TAAAAAAGAGAGTAGTTATT+TGG + chr4_3:52158000-52158019 Msa0646400:intron 20.0%
!!! ATCATTCTTTTTCTACTTTA+TGG + chr4_3:52158748-52158767 Msa0646400:intron 20.0%
!! GTATTAAAACATTAATGTGA+TGG - chr4_3:52158874-52158893 None:intergenic 20.0%
!! ATGTTCAATGTTAAAAAGAT+AGG + chr4_3:52159265-52159284 Msa0646400:intron 20.0%
!! TTTAACATTCTTAGGAAATT+TGG + chr4_3:52160099-52160118 Msa0646400:intron 20.0%
!!! AAAAGTATTTAAAATTCCAC+AGG + chr4_3:52160139-52160158 Msa0646400:intron 20.0%
!! ATTGAGAAACAATTAATCTT+GGG - chr4_3:52160241-52160260 None:intergenic 20.0%
!! GTATATCAAACATTAAATGT+AGG - chr4_3:52160425-52160444 None:intergenic 20.0%
!! ACATTTAATGTTTGATATAC+AGG + chr4_3:52160425-52160444 Msa0646400:intron 20.0%
!!! GGGTTTATATTTTATATCAA+AGG - chr4_3:52160469-52160488 None:intergenic 20.0%
!!! AATAAAATTTTCTGAGTATC+TGG + chr4_3:52160627-52160646 Msa0646400:intron 20.0%
!!! TGACCTTAAAACTTTTTTTA+TGG - chr4_3:52161514-52161533 None:intergenic 20.0%
!!! AAAAAAAGTTTTAAGGTCAA+TGG + chr4_3:52161515-52161534 Msa0646400:intron 20.0%
!!! CTATTATTATTATTTTCACC+TGG + chr4_3:52161863-52161882 Msa0646400:CDS 20.0%
! TTGTTTCATCTTCTATTGAT+TGG + chr4_3:52153230-52153249 Msa0646400:CDS 25.0%
! TAGTCGATCTAAATCAAAAA+AGG - chr4_3:52153544-52153563 None:intergenic 25.0%
! AGTATCTATAGTAGATAAGA+TGG + chr4_3:52153805-52153824 Msa0646400:intron 25.0%
! AGATCTAGAGATTAATGAAT+TGG + chr4_3:52153959-52153978 Msa0646400:intron 25.0%
!! AACTTTTCATTATCACTTGT+TGG + chr4_3:52154336-52154355 Msa0646400:intron 25.0%
!! ACTTTTCATTATCACTTGTT+GGG + chr4_3:52154337-52154356 Msa0646400:intron 25.0%
!! ACATGTTTACATACTTTTCA+AGG + chr4_3:52154488-52154507 Msa0646400:CDS 25.0%
! TAAAATGTCTGTCTAAAGAT+GGG - chr4_3:52154531-52154550 None:intergenic 25.0%
! TTAAAATGTCTGTCTAAAGA+TGG - chr4_3:52154532-52154551 None:intergenic 25.0%
!!! CTTTCCATATTTTTGCAAAA+CGG - chr4_3:52155140-52155159 None:intergenic 25.0%
! TCTGTCTTCATTAAGTTTAT+GGG + chr4_3:52155284-52155303 Msa0646400:intron 25.0%
!! AACAAACAAACTAGCTTATA+TGG - chr4_3:52155512-52155531 None:intergenic 25.0%
! GCGAAAAAAACTAAAACTAT+CGG - chr4_3:52155698-52155717 None:intergenic 25.0%
!!! AAATCCGTTTATTTTATCCA+TGG - chr4_3:52155830-52155849 None:intergenic 25.0%
! TAATTTACTCGGTTTAATAG+CGG - chr4_3:52155922-52155941 None:intergenic 25.0%
!!! TTTTTTCTTAGGAAGTTGAA+TGG - chr4_3:52155962-52155981 None:intergenic 25.0%
!!! TTTGTTGTTTGTGTAATGTA+TGG + chr4_3:52156172-52156191 Msa0646400:intron 25.0%
! AAAATTCAAAATTCCGAGTA+GGG - chr4_3:52156467-52156486 None:intergenic 25.0%
! AAAAATTCAAAATTCCGAGT+AGG - chr4_3:52156468-52156487 None:intergenic 25.0%
!!! TTTTGTCTACATTTTTCAGA+TGG + chr4_3:52156487-52156506 Msa0646400:intron 25.0%
!! TGTTTGGGATACAAAATTTA+TGG + chr4_3:52156543-52156562 Msa0646400:intron 25.0%
!!! ATTTTTCAGACTGAAAACTA+GGG - chr4_3:52156785-52156804 None:intergenic 25.0%
! AACAAAAACAGGAATACATA+TGG - chr4_3:52156878-52156897 None:intergenic 25.0%
! TGTTAATTTATGCTAGAAAG+AGG + chr4_3:52156980-52156999 Msa0646400:intron 25.0%
! GTTAATTTATGCTAGAAAGA+GGG + chr4_3:52156981-52157000 Msa0646400:intron 25.0%
! CAAATGTCAAGAGAAAAATA+AGG - chr4_3:52157479-52157498 None:intergenic 25.0%
! TATTAGAATGAGTGTAAAGA+AGG - chr4_3:52157515-52157534 None:intergenic 25.0%
!!! TCTTTTTTATTACATTGAGC+AGG - chr4_3:52157989-52158008 None:intergenic 25.0%
!! ATTGTAGAGAGAAATTTGTT+AGG + chr4_3:52158123-52158142 Msa0646400:intron 25.0%
! AATGCAAAGCAAAATTCATA+GGG - chr4_3:52158432-52158451 None:intergenic 25.0%
! AAACAATAGACAAGGTTAAT+TGG - chr4_3:52158916-52158935 None:intergenic 25.0%
! TGTTGTTAAAACAATAGACA+AGG - chr4_3:52158924-52158943 None:intergenic 25.0%
! AAGTGTATAACTACAGTAAA+AGG - chr4_3:52159090-52159109 None:intergenic 25.0%
!! AGATTGTAGATTTTGTACTT+TGG + chr4_3:52159288-52159307 Msa0646400:intron 25.0%
! TTTGTACTTTGGTATAATTG+TGG + chr4_3:52159299-52159318 Msa0646400:intron 25.0%
! TTATTCTGATAGATCTTACT+TGG + chr4_3:52159409-52159428 Msa0646400:intron 25.0%
! TAAAGATGATATATTGACCT+AGG - chr4_3:52159552-52159571 None:intergenic 25.0%
! ACATAGTTATTCATTCTTCA+TGG + chr4_3:52159728-52159747 Msa0646400:intron 25.0%
!!! AGATTTTTTTAGAAATACCC+AGG - chr4_3:52160066-52160085 None:intergenic 25.0%
! TGAAATTATTCCCATGTTAA+GGG - chr4_3:52160178-52160197 None:intergenic 25.0%
! ATGAAATTATTCCCATGTTA+AGG - chr4_3:52160179-52160198 None:intergenic 25.0%
! TTAACATGGGAATAATTTCA+TGG + chr4_3:52160178-52160197 Msa0646400:intron 25.0%
! TAACATGGGAATAATTTCAT+GGG + chr4_3:52160179-52160198 Msa0646400:intron 25.0%
! ACAATTAATCTTGGGTATAA+CGG - chr4_3:52160233-52160252 None:intergenic 25.0%
! GATTGAGAAACAATTAATCT+TGG - chr4_3:52160242-52160261 None:intergenic 25.0%
! TATTTATCGTATGTGAAGTT+AGG - chr4_3:52160378-52160397 None:intergenic 25.0%
! ATGCAGTAATTGATATTACA+AGG + chr4_3:52160993-52161012 Msa0646400:intron 25.0%
! AGTAATTGATATTACAAGGA+TGG + chr4_3:52160997-52161016 Msa0646400:intron 25.0%
!! AAGCATTTTGAATCTGAAAA+AGG + chr4_3:52161055-52161074 Msa0646400:CDS 25.0%
! ATTGCATTACAACAAAATGA+TGG - chr4_3:52161092-52161111 None:intergenic 25.0%
! AATGATATTAAACAATGCAC+AGG - chr4_3:52161189-52161208 None:intergenic 25.0%
! TGTGCATTGTTTAATATCAT+TGG + chr4_3:52161188-52161207 Msa0646400:intron 25.0%
!!! TACTTTCGTGTTGATTTTTA+TGG - chr4_3:52161265-52161284 None:intergenic 25.0%
! TAGTATTGTTGTAGAAAAGA+TGG + chr4_3:52161357-52161376 Msa0646400:intron 25.0%
! TTCATCTTCTATTGATTGGT+AGG + chr4_3:52153234-52153253 Msa0646400:intron 30.0%
! TCATCTTCTATTGATTGGTA+GGG + chr4_3:52153235-52153254 Msa0646400:intron 30.0%
ATCAAACATCGACAATTGTT+TGG + chr4_3:52153327-52153346 Msa0646400:intron 30.0%
!! ATTGTTTGGTCTTAGTAGTA+AGG + chr4_3:52153341-52153360 Msa0646400:intron 30.0%
!! TTGTTTGGTCTTAGTAGTAA+GGG + chr4_3:52153342-52153361 Msa0646400:intron 30.0%
AACTTGGTTCAATTTCGTTT+CGG + chr4_3:52153422-52153441 Msa0646400:intron 30.0%
CAATTTCCACTTTCGTATAA+TGG - chr4_3:52153500-52153519 None:intergenic 30.0%
TATACGAAAGTGGAAATTGT+TGG + chr4_3:52153501-52153520 Msa0646400:intron 30.0%
ATACGAAAGTGGAAATTGTT+GGG + chr4_3:52153502-52153521 Msa0646400:intron 30.0%
CGATCTAAATCAAAAAAGGT+TGG - chr4_3:52153540-52153559 None:intergenic 30.0%
GTAAAGAATAATAAGCCTAG+TGG + chr4_3:52153630-52153649 Msa0646400:intron 30.0%
ATCTATAGTAGATAAGATGG+TGG + chr4_3:52153808-52153827 Msa0646400:intron 30.0%
!! AGATAAGATGGTGGAAAATT+TGG + chr4_3:52153817-52153836 Msa0646400:intron 30.0%
! AAAATTTGGCTTAAGTGGTT+TGG + chr4_3:52153831-52153850 Msa0646400:intron 30.0%
! AAATTTGGCTTAAGTGGTTT+GGG + chr4_3:52153832-52153851 Msa0646400:intron 30.0%
TAAAAATTCTACACAACCTC+CGG - chr4_3:52153865-52153884 None:intergenic 30.0%
!!! GTTGTGTAGAATTTTTAGCA+AGG + chr4_3:52153868-52153887 Msa0646400:intron 30.0%
ATGATACACTTCTGAATGTT+AGG + chr4_3:52154116-52154135 Msa0646400:intron 30.0%
AAGTACTACACAAGAAATTC+AGG - chr4_3:52154195-52154214 None:intergenic 30.0%
ATTTCTTGTGTAGTACTTTG+AGG + chr4_3:52154197-52154216 Msa0646400:intron 30.0%
! AGCTTTATAACTGCTTGAAT+CGG - chr4_3:52154271-52154290 None:intergenic 30.0%
! CACACCATTTGAAATGTTAT+TGG + chr4_3:52154384-52154403 Msa0646400:intron 30.0%
CAGTCCAATAACATTTCAAA+TGG - chr4_3:52154391-52154410 None:intergenic 30.0%
! TTCTCTCATATTTCTATGAG+TGG + chr4_3:52154609-52154628 Msa0646400:intron 30.0%
! TTTCCTTGTGAACATGATTT+TGG + chr4_3:52154711-52154730 Msa0646400:intron 30.0%
! TTATATTCTTTTATGCTGCC+AGG + chr4_3:52154742-52154761 Msa0646400:intron 30.0%
! TATATTCTTTTATGCTGCCA+GGG + chr4_3:52154743-52154762 Msa0646400:intron 30.0%
CTGAATAAACAATTGCAGTA+TGG - chr4_3:52155074-52155093 None:intergenic 30.0%
! AAGACCGTTTTGCAAAAATA+TGG + chr4_3:52155133-52155152 Msa0646400:CDS 30.0%
! CGTTTTGCAAAAATATGGAA+AGG + chr4_3:52155138-52155157 Msa0646400:CDS 30.0%
!!! TGTTCTTTTTTAGTGTCCTT+AGG + chr4_3:52155240-52155259 Msa0646400:intron 30.0%
!!! GTTCTTTTTTAGTGTCCTTA+GGG + chr4_3:52155241-52155260 Msa0646400:intron 30.0%
GTCTGTCTTCATTAAGTTTA+TGG + chr4_3:52155283-52155302 Msa0646400:intron 30.0%
CTGTCTTCATTAAGTTTATG+GGG + chr4_3:52155285-52155304 Msa0646400:intron 30.0%
TGTCTTCATTAAGTTTATGG+GGG + chr4_3:52155286-52155305 Msa0646400:intron 30.0%
GCTTGATATTCTATTCTCTT+TGG + chr4_3:52155376-52155395 Msa0646400:intron 30.0%
AAATGTTAATCCTGAAGCTA+CGG - chr4_3:52155429-52155448 None:intergenic 30.0%
! TAGCTTCAGGATTAACATTT+TGG + chr4_3:52155429-52155448 Msa0646400:intron 30.0%
GTTGCAATAACAGTAGATAT+TGG - chr4_3:52155462-52155481 None:intergenic 30.0%
ATCGGCAATGCTAAATAAAA+CGG - chr4_3:52155680-52155699 None:intergenic 30.0%
! ATTTTATCCGTAGATATCCA+CGG - chr4_3:52155773-52155792 None:intergenic 30.0%
TTATCCATGGATATCCATTA+AGG - chr4_3:52155817-52155836 None:intergenic 30.0%
AATTTACTCGGTTTAATAGC+GGG - chr4_3:52155921-52155940 None:intergenic 30.0%
TAGGAAGTTGAATGGTATAA+AGG - chr4_3:52155954-52155973 None:intergenic 30.0%
!!! AATACCTAGGGTTTTTTCTT+AGG - chr4_3:52155973-52155992 None:intergenic 30.0%
AATAACACTCACAATACCTA+GGG - chr4_3:52155985-52156004 None:intergenic 30.0%
TAATAACACTCACAATACCT+AGG - chr4_3:52155986-52156005 None:intergenic 30.0%
! CCACTTTCACTTTCTTTTAA+AGG - chr4_3:52156020-52156039 None:intergenic 30.0%
! CCTTTAAAAGAAAGTGAAAG+TGG + chr4_3:52156017-52156036 Msa0646400:intron 30.0%
TAAAAGAAAGTGAAAGTGGT+TGG + chr4_3:52156021-52156040 Msa0646400:intron 30.0%
AAAAGAAAGTGAAAGTGGTT+GGG + chr4_3:52156022-52156041 Msa0646400:intron 30.0%
CGGATTTCATATTTATCCAA+CGG + chr4_3:52156392-52156411 Msa0646400:intron 30.0%
TTTCTCAATACAAGTCTAGT+AGG + chr4_3:52156674-52156693 Msa0646400:CDS 30.0%
!!! TAGTAGGTATGCTTTTTTGT+GGG + chr4_3:52156690-52156709 Msa0646400:intron 30.0%
TAAGAAATTCACAGTATGGA+CGG - chr4_3:52156761-52156780 None:intergenic 30.0%
!! CATTTTTCAGACTGAAAACT+AGG - chr4_3:52156786-52156805 None:intergenic 30.0%
! AGTTTTCAGTCTGAAAAATG+TGG + chr4_3:52156786-52156805 Msa0646400:intron 30.0%
AAAGAGTTCAAATCAAACCT+GGG - chr4_3:52157056-52157075 None:intergenic 30.0%
AAAAGAGTTCAAATCAAACC+TGG - chr4_3:52157057-52157076 None:intergenic 30.0%
TATCTGATGATCTGATGATT+TGG + chr4_3:52157095-52157114 Msa0646400:intron 30.0%
AACAGAATTACAGAGGTTAA+GGG - chr4_3:52157292-52157311 None:intergenic 30.0%
AATTAAAGTTGCAACATCGT+GGG - chr4_3:52157632-52157651 None:intergenic 30.0%
AATGTTGAGATTGACTATCT+TGG + chr4_3:52157660-52157679 Msa0646400:intron 30.0%
ATGTTGAGATTGACTATCTT+GGG + chr4_3:52157661-52157680 Msa0646400:intron 30.0%
! ATTCTAAGAACTTAGAACAG+TGG + chr4_3:52157823-52157842 Msa0646400:intron 30.0%
! TGACGAGTGTTTTCAATTTT+AGG + chr4_3:52158236-52158255 Msa0646400:intron 30.0%
! GACGAGTGTTTTCAATTTTA+GGG + chr4_3:52158237-52158256 Msa0646400:intron 30.0%
!!! TGTTTTCAATTTTAGGGCTT+AGG + chr4_3:52158243-52158262 Msa0646400:intron 30.0%
AGTAACTGATCAGACTAAAT+AGG - chr4_3:52158312-52158331 None:intergenic 30.0%
GAATGCAAAGCAAAATTCAT+AGG - chr4_3:52158433-52158452 None:intergenic 30.0%
! AGTAACATAGACAAACCTTT+TGG - chr4_3:52158473-52158492 None:intergenic 30.0%
CAGTTCATACTTCAAAATAC+TGG + chr4_3:52158611-52158630 Msa0646400:CDS 30.0%
TATAACATTGTACTTACAGC+CGG - chr4_3:52158681-52158700 None:intergenic 30.0%
AATTCATGCAGGACAAAATA+AGG - chr4_3:52158851-52158870 None:intergenic 30.0%
TTAGGAATATGCTTGAAAGT+AGG - chr4_3:52158962-52158981 None:intergenic 30.0%
TACTTTCAAGCATATTCCTA+AGG + chr4_3:52158961-52158980 Msa0646400:CDS 30.0%
! TGCTTTCATTCACATTGTTT+TGG + chr4_3:52158986-52159005 Msa0646400:intron 30.0%
!!! TCAGATCATCCACATTTTTT+AGG - chr4_3:52159063-52159082 None:intergenic 30.0%
AATATAGCATGTTAGGACTA+AGG - chr4_3:52159207-52159226 None:intergenic 30.0%
GTGACAAAATATAGCATGTT+AGG - chr4_3:52159214-52159233 None:intergenic 30.0%
GTCTATGTATTCTTGTGTAT+TGG + chr4_3:52159321-52159340 Msa0646400:intron 30.0%
TATGTATTCTTGTGTATTGG+AGG + chr4_3:52159324-52159343 Msa0646400:intron 30.0%
AGAAAACAAATTTGCAGCAA+AGG - chr4_3:52159440-52159459 None:intergenic 30.0%
!! TGCAAATTTGTTTTCTCTTC+AGG + chr4_3:52159444-52159463 Msa0646400:intron 30.0%
! TTTTTATAAGATGGTCACCT+AGG + chr4_3:52159532-52159551 Msa0646400:intron 30.0%
GACAATGGAAGTAAAAAACT+GGG - chr4_3:52159779-52159798 None:intergenic 30.0%
TGACAATGGAAGTAAAAAAC+TGG - chr4_3:52159780-52159799 None:intergenic 30.0%
! TTTTACTTCCATTGTCAGAA+AGG + chr4_3:52159783-52159802 Msa0646400:intron 30.0%
TTTACTTCCATTGTCAGAAA+GGG + chr4_3:52159784-52159803 Msa0646400:intron 30.0%
TTTGATACTGCTCAATTTGA+TGG + chr4_3:52159816-52159835 Msa0646400:CDS 30.0%
TTGATACTGCTCAATTTGAT+GGG + chr4_3:52159817-52159836 Msa0646400:CDS 30.0%
!!! TGAACTCGGCAATTTTTTTA+AGG - chr4_3:52159845-52159864 None:intergenic 30.0%
! CAATAAGGCATTATTGAACT+CGG - chr4_3:52159859-52159878 None:intergenic 30.0%
!! CTTTTGGTAGTAGAAACTTA+GGG + chr4_3:52159966-52159985 Msa0646400:intron 30.0%
!! TTTTGGTAGTAGAAACTTAG+GGG + chr4_3:52159967-52159986 Msa0646400:intron 30.0%
TGGACTCAAAAATTATTCCT+AGG + chr4_3:52160002-52160021 Msa0646400:intron 30.0%
GGAATAATTTCATGGGAATT+TGG + chr4_3:52160186-52160205 Msa0646400:intron 30.0%
TCTCAATCTTGTAACAAACA+TGG + chr4_3:52160254-52160273 Msa0646400:intron 30.0%
CTCAATCTTGTAACAAACAT+GGG + chr4_3:52160255-52160274 Msa0646400:intron 30.0%
GTAATTCACCTACAATGTTA+AGG + chr4_3:52160312-52160331 Msa0646400:intron 30.0%
AAACACAATTCACTTGACTA+GGG - chr4_3:52160489-52160508 None:intergenic 30.0%
TGTTTGATATTATTAGTGCC+AGG + chr4_3:52160504-52160523 Msa0646400:intron 30.0%
!!! ATCTTTCAGTGTTTTAACAG+TGG - chr4_3:52160722-52160741 None:intergenic 30.0%
TTCAGATTCTGCAAATTTAC+TGG - chr4_3:52160761-52160780 None:intergenic 30.0%
TACTGAATATGCTATCTTCA+TGG + chr4_3:52160791-52160810 Msa0646400:CDS 30.0%
TGTTATCTCTGTAAAACCAT+TGG + chr4_3:52160875-52160894 Msa0646400:intron 30.0%
ACGAAAGTAAATCAATGTAG+TGG + chr4_3:52161276-52161295 Msa0646400:intron 30.0%
! TAAATCAATGTAGTGGAGAT+CGG + chr4_3:52161283-52161302 Msa0646400:intron 30.0%
AAGGAGAGAAAATTAGATGA+AGG + chr4_3:52161437-52161456 Msa0646400:intron 30.0%
AGAAAATTAGATGAAGGTCA+GGG + chr4_3:52161443-52161462 Msa0646400:intron 30.0%
!!! AAGTTTTAAGGTCAATGGTT+TGG + chr4_3:52161520-52161539 Msa0646400:intron 30.0%
ATTAAAATGTCTGCGTGTAA+CGG - chr4_3:52161691-52161710 None:intergenic 30.0%
GCATGAATTCTTAAAGAGAT+TGG - chr4_3:52161785-52161804 None:intergenic 30.0%
TTGAAGAAGCAAAGGACTTT+GGG + chr4_3:52152787-52152806 Msa0646400:five_prime_UTR 35.0%
TCTTAAAGGTCATCAATTGC+AGG + chr4_3:52153177-52153196 Msa0646400:CDS 35.0%
TAGTCACCATTATACGAAAG+TGG + chr4_3:52153491-52153510 Msa0646400:intron 35.0%
! ACTACTTTAAAGACCTGGAA+GGG + chr4_3:52154461-52154480 Msa0646400:CDS 35.0%
CCTTTATGTCCTAAAATCGA+AGG - chr4_3:52154677-52154696 None:intergenic 35.0%
!!! CCTTCGATTTTAGGACATAA+AGG + chr4_3:52154674-52154693 Msa0646400:intron 35.0%
ACTACAAATGCTAACCTTTG+AGG + chr4_3:52154821-52154840 Msa0646400:intron 35.0%
AGTATCTGTACATTCCTCAA+AGG - chr4_3:52154838-52154857 None:intergenic 35.0%
!! ACTACAGTTCTCTGAGATTA+TGG + chr4_3:52155013-52155032 Msa0646400:intron 35.0%
!! CTACAGTTCTCTGAGATTAT+GGG + chr4_3:52155014-52155033 Msa0646400:intron 35.0%
! AGTAAGTGGTGAAGTGTTAA+TGG + chr4_3:52155038-52155057 Msa0646400:CDS 35.0%
CTCAATACTGTTGAGTTTCA+TGG + chr4_3:52155213-52155232 Msa0646400:intron 35.0%
ATTAATTCTTACGCTCCCTA+AGG - chr4_3:52155259-52155278 None:intergenic 35.0%
!!! TATGGGGGAATTTTTTGTTG+TGG + chr4_3:52155301-52155320 Msa0646400:intron 35.0%
!!! ATGGGGGAATTTTTTGTTGT+GGG + chr4_3:52155302-52155321 Msa0646400:intron 35.0%
!!! AATTTTTTGTTGTGGGGGTA+GGG + chr4_3:52155309-52155328 Msa0646400:intron 35.0%
AAGCAGATTCTTACAACTGT+TGG - chr4_3:52155360-52155379 None:intergenic 35.0%
GGCAATTTGATCAGTGATAA+TGG - chr4_3:52155608-52155627 None:intergenic 35.0%
! TTTTATCCGTAGATATCCAC+GGG - chr4_3:52155772-52155791 None:intergenic 35.0%
! GATACCTTAATGGATATCCA+TGG + chr4_3:52155810-52155829 Msa0646400:intron 35.0%
ACTTCCTAAGAAAAAACCCT+AGG + chr4_3:52155966-52155985 Msa0646400:intron 35.0%
TTCATATTTATCCAACGGAG+CGG + chr4_3:52156397-52156416 Msa0646400:intron 35.0%
! TGTATAAATCAAGCTCTAGC+TGG - chr4_3:52156645-52156664 None:intergenic 35.0%
!!! CTAGTAGGTATGCTTTTTTG+TGG + chr4_3:52156689-52156708 Msa0646400:intron 35.0%
ATAAGAGAAGCTGATGAAAC+GGG - chr4_3:52156738-52156757 None:intergenic 35.0%
GATAAGAGAAGCTGATGAAA+CGG - chr4_3:52156739-52156758 None:intergenic 35.0%
GGGTTAAGAAATTCACAGTA+TGG - chr4_3:52156765-52156784 None:intergenic 35.0%
ATTTATGCTAGAAAGAGGGT+TGG + chr4_3:52156985-52157004 Msa0646400:intron 35.0%
CAAACAAAAGTTGTCAGAGA+GGG + chr4_3:52157208-52157227 Msa0646400:CDS 35.0%
GAACAGAATTACAGAGGTTA+AGG - chr4_3:52157293-52157312 None:intergenic 35.0%
CAACAACTTCACCAATCTTT+AGG - chr4_3:52157394-52157413 None:intergenic 35.0%
AAGATTGGTGAAGTTGTTGA+TGG + chr4_3:52157395-52157414 Msa0646400:intron 35.0%
GATGGTGTTCAGTATGATTA+TGG + chr4_3:52157446-52157465 Msa0646400:CDS 35.0%
TGTTCAGTATGATTATGGTC+AGG + chr4_3:52157451-52157470 Msa0646400:CDS 35.0%
TCAGTGTTTGATGTGGATAT+TGG + chr4_3:52157553-52157572 Msa0646400:intron 35.0%
TTTGATGTGGATATTGGAGA+TGG + chr4_3:52157559-52157578 Msa0646400:CDS 35.0%
! GGGTAAATTTTGTACCTGAT+CGG - chr4_3:52157612-52157631 None:intergenic 35.0%
CAATTAAAGTTGCAACATCG+TGG - chr4_3:52157633-52157652 None:intergenic 35.0%
!!! AGGCTGTTTTTATTTCCAAG+AGG + chr4_3:52157932-52157951 Msa0646400:intron 35.0%
TACATATGCAATTTGCCTCT+TGG - chr4_3:52157950-52157969 None:intergenic 35.0%
GCTCTATCTGTGAATAAAAC+TGG + chr4_3:52158022-52158041 Msa0646400:intron 35.0%
ATCTGTGAATAAAACTGGTG+CGG + chr4_3:52158027-52158046 Msa0646400:intron 35.0%
TTGAAAACACTCGTCAGAAA+AGG - chr4_3:52158232-52158251 None:intergenic 35.0%
ACTGATCAGACTAAATAGGT+TGG - chr4_3:52158308-52158327 None:intergenic 35.0%
! TCTTGCTCAATTTCTGCTTT+TGG + chr4_3:52158333-52158352 Msa0646400:intron 35.0%
! TGTAGTTTGTATGCTCCAAA+AGG + chr4_3:52158455-52158474 Msa0646400:intron 35.0%
CATATGATGCTGCTGATAAA+TGG + chr4_3:52158543-52158562 Msa0646400:CDS 35.0%
! TAATGTGATGGAATTCATGC+AGG - chr4_3:52158862-52158881 None:intergenic 35.0%
!!! GAGGGATAATTTTTAGCTCT+AGG + chr4_3:52159028-52159047 Msa0646400:intron 35.0%
!!! TTTTTAGCTCTAGGAGTTCA+AGG + chr4_3:52159037-52159056 Msa0646400:intron 35.0%
AGTTCAAGGCCTAAAAAATG+TGG + chr4_3:52159051-52159070 Msa0646400:intron 35.0%
! ACATGCTATATTTTGTCACG+AGG + chr4_3:52159215-52159234 Msa0646400:intron 35.0%
! CATGCTATATTTTGTCACGA+GGG + chr4_3:52159216-52159235 Msa0646400:intron 35.0%
ATTCTTGTGTATTGGAGGTA+AGG + chr4_3:52159329-52159348 Msa0646400:intron 35.0%
CAGTAATCAATTCCACAAGT+TGG - chr4_3:52159606-52159625 None:intergenic 35.0%
! AACTATGTAGCTCTGCAATA+AGG - chr4_3:52159681-52159700 None:intergenic 35.0%
! AATGTTAAAACGGCTCCTTT+TGG + chr4_3:52159950-52159969 Msa0646400:intron 35.0%
CCTAAGTTTCTACTACCAAA+AGG - chr4_3:52159968-52159987 None:intergenic 35.0%
!! CCTTTTGGTAGTAGAAACTT+AGG + chr4_3:52159965-52159984 Msa0646400:intron 35.0%
! TTTGGTAGTAGAAACTTAGG+GGG + chr4_3:52159968-52159987 Msa0646400:intron 35.0%
CATACCGTGGAATATAAAGT+CGG + chr4_3:52160030-52160049 Msa0646400:intron 35.0%
ATACCGTGGAATATAAAGTC+GGG + chr4_3:52160031-52160050 Msa0646400:intron 35.0%
GCACACTCTTTAACATTCTT+AGG + chr4_3:52160091-52160110 Msa0646400:intron 35.0%
AATTATTCCCATGTTAAGGG+TGG - chr4_3:52160175-52160194 None:intergenic 35.0%
! TTGGAAGTTATTTCATTCCC+AGG + chr4_3:52160205-52160224 Msa0646400:intron 35.0%
TTACATTCCTGGGAATACAT+GGG - chr4_3:52160296-52160315 None:intergenic 35.0%
ATTACATTCCTGGGAATACA+TGG - chr4_3:52160297-52160316 None:intergenic 35.0%
TGTAGGTGAATTACATTCCT+GGG - chr4_3:52160306-52160325 None:intergenic 35.0%
TTGTAGGTGAATTACATTCC+TGG - chr4_3:52160307-52160326 None:intergenic 35.0%
AGGATGATCAATAGGTACAT+TGG - chr4_3:52160358-52160377 None:intergenic 35.0%
GTGAAGTTAGGATGATCAAT+AGG - chr4_3:52160366-52160385 None:intergenic 35.0%
CAAACACAATTCACTTGACT+AGG - chr4_3:52160490-52160509 None:intergenic 35.0%
! GTGCTATTGTCAATCTCATA+GGG + chr4_3:52160649-52160668 Msa0646400:intron 35.0%
AGATAGCATATTCAGTAGCA+AGG - chr4_3:52160788-52160807 None:intergenic 35.0%
CTAACCAGGAAATATCATTG+TGG - chr4_3:52160821-52160840 None:intergenic 35.0%
TTCAGAAACTTCAACTAACC+AGG - chr4_3:52160835-52160854 None:intergenic 35.0%
!! AAGTGTACTGATTAAGAAGC+AGG - chr4_3:52160923-52160942 None:intergenic 35.0%
! AACCATTTTCCTTAAGACCA+GGG - chr4_3:52160946-52160965 None:intergenic 35.0%
! AAACCATTTTCCTTAAGACC+AGG - chr4_3:52160947-52160966 None:intergenic 35.0%
TGTTGTATGAGATGAAGTGT+TGG + chr4_3:52161214-52161233 Msa0646400:intron 35.0%
AACGCTTCATCTCATACAAA+TGG - chr4_3:52161240-52161259 None:intergenic 35.0%
ATTTGTATGAGATGAAGCGT+TGG + chr4_3:52161239-52161258 Msa0646400:intron 35.0%
TGCTAATACTAGACGAGTTA+CGG + chr4_3:52161324-52161343 Msa0646400:intron 35.0%
AGACTTGTAGATTCTGAGTA+AGG + chr4_3:52161418-52161437 Msa0646400:intron 35.0%
GAGAAAATTAGATGAAGGTC+AGG + chr4_3:52161442-52161461 Msa0646400:intron 35.0%
TTTCTTGTACTTTGCTGATG+AGG + chr4_3:52161643-52161662 Msa0646400:intron 35.0%
TTAAAATGTCTGCGTGTAAC+GGG - chr4_3:52161690-52161709 None:intergenic 35.0%
! GTTACACGCAGACATTTTAA+TGG + chr4_3:52161690-52161709 Msa0646400:intron 35.0%
ATACTAGTCAACAGATTTGC+AGG - chr4_3:52161751-52161770 None:intergenic 35.0%
AGAATTCATGCTTCTACAAC+TGG + chr4_3:52161794-52161813 Msa0646400:CDS 35.0%
GTTGAAGAAGCAAAGGACTT+TGG + chr4_3:52152786-52152805 Msa0646400:five_prime_UTR 40.0%
CAATTACGCTGTGAACTTCA+CGG + chr4_3:52152887-52152906 Msa0646400:CDS 40.0%
AACTTCATCGCGTGACAAAA+CGG + chr4_3:52152967-52152986 Msa0646400:CDS 40.0%
GTGACAAAACGGTTAGGTTA+TGG + chr4_3:52152978-52152997 Msa0646400:CDS 40.0%
TCGCAAATTCGTCTTGAACA+AGG + chr4_3:52153012-52153031 Msa0646400:CDS 40.0%
GTCTTGAACAAGGTTCTTGT+AGG + chr4_3:52153022-52153041 Msa0646400:CDS 40.0%
! TGTAGGTCACACAAGTTTTG+TGG + chr4_3:52153039-52153058 Msa0646400:CDS 40.0%
!! GTAGGTCACACAAGTTTTGT+GGG + chr4_3:52153040-52153059 Msa0646400:CDS 40.0%
! GTTTTGTGGGACCTATATCA+TGG + chr4_3:52153053-52153072 Msa0646400:CDS 40.0%
TTCGGTGGAATCCATGATAT+AGG - chr4_3:52153067-52153086 None:intergenic 40.0%
!! TGGATACTCTTGTGTTGGTT+TGG + chr4_3:52153125-52153144 Msa0646400:CDS 40.0%
!! GGATACTCTTGTGTTGGTTT+GGG + chr4_3:52153126-52153145 Msa0646400:CDS 40.0%
!! TTGGTTTGGGACTTGAATAG+TGG + chr4_3:52153139-52153158 Msa0646400:CDS 40.0%
ATTGCAGGTTACTGGTATTG+TGG + chr4_3:52153192-52153211 Msa0646400:CDS 40.0%
!! ACTGGTATTGTGGTTGATGA+TGG + chr4_3:52153202-52153221 Msa0646400:CDS 40.0%
GTCTTAGTAGTAAGGGATTC+AGG + chr4_3:52153349-52153368 Msa0646400:intron 40.0%
GATTCAGGTGCTTAAGTAAG+TGG + chr4_3:52153364-52153383 Msa0646400:intron 40.0%
TTCGATCATGTTTCTTGCGT+AGG + chr4_3:52153394-52153413 Msa0646400:intron 40.0%
TCGATCATGTTTCTTGCGTA+GGG + chr4_3:52153395-52153414 Msa0646400:intron 40.0%
TGGAAATTGTTGGGTCATGA+GGG + chr4_3:52153511-52153530 Msa0646400:intron 40.0%
! TAAGATCAGCGCTTTTGTGT+GGG + chr4_3:52153591-52153610 Msa0646400:intron 40.0%
TAATAAGCCTAGTGGAGATG+TGG + chr4_3:52153638-52153657 Msa0646400:intron 40.0%
ATAACATCCACATCTCCACT+AGG - chr4_3:52153648-52153667 None:intergenic 40.0%
GTGCTAAGACTAGACATGAT+AGG + chr4_3:52153677-52153696 Msa0646400:intron 40.0%
! GGTGGAAAATTTGGCTTAAG+TGG + chr4_3:52153826-52153845 Msa0646400:intron 40.0%
TTTGTCCCACTAAGTAGTGT+CGG - chr4_3:52154034-52154053 None:intergenic 40.0%
! TCTTGTGTAGTACTTTGAGG+AGG + chr4_3:52154200-52154219 Msa0646400:intron 40.0%
! GTGACACTACTTTAAAGACC+TGG + chr4_3:52154456-52154475 Msa0646400:CDS 40.0%
! CACTACTTTAAAGACCTGGA+AGG + chr4_3:52154460-52154479 Msa0646400:CDS 40.0%
! TAAACATGTTTTGCCCTTCC+AGG - chr4_3:52154477-52154496 None:intergenic 40.0%
!! CATACTTTTCAAGGACATGC+AGG + chr4_3:52154497-52154516 Msa0646400:CDS 40.0%
! TCATATTTCTATGAGTGGCG+AGG + chr4_3:52154614-52154633 Msa0646400:intron 40.0%
ATGTCCTAAAATCGAAGGCA+CGG - chr4_3:52154672-52154691 None:intergenic 40.0%
CTGCCAAAATCATGTTCACA+AGG - chr4_3:52154717-52154736 None:intergenic 40.0%
GAATGTACAGATACTGTTCG+TGG + chr4_3:52154843-52154862 Msa0646400:intron 40.0%
ATCCTATCTGCATCTCATGA+TGG + chr4_3:52154891-52154910 Msa0646400:CDS 40.0%
TCCTATCTGCATCTCATGAT+GGG + chr4_3:52154892-52154911 Msa0646400:CDS 40.0%
ATATTTCCTGATGCAGAGCA+AGG - chr4_3:52154966-52154985 None:intergenic 40.0%
GTAACAGAAACAAGTCAAGC+AGG - chr4_3:52154995-52155014 None:intergenic 40.0%
! TGGTGAAGTGTTAATGGAGA+TGG + chr4_3:52155044-52155063 Msa0646400:CDS 40.0%
! GAAGTGTTAATGGAGATGGT+TGG + chr4_3:52155048-52155067 Msa0646400:CDS 40.0%
! TCAGTTGATTCACATGCATC+AGG + chr4_3:52155090-52155109 Msa0646400:CDS 40.0%
! GGGAGCGTAAGAATTAATCT+TGG + chr4_3:52155261-52155280 Msa0646400:intron 40.0%
!!! TGGGGGAATTTTTTGTTGTG+GGG + chr4_3:52155303-52155322 Msa0646400:intron 40.0%
!!! GAATTTTTTGTTGTGGGGGT+AGG + chr4_3:52155308-52155327 Msa0646400:intron 40.0%
!!! ATTTTTTGTTGTGGGGGTAG+GGG + chr4_3:52155310-52155329 Msa0646400:intron 40.0%
TGTCATCCCATTCCTTATTC+CGG + chr4_3:52155334-52155353 Msa0646400:intron 40.0%
AGATTCTTACAACTGTTGGC+CGG - chr4_3:52155356-52155375 None:intergenic 40.0%
!! TCAGTGATAATGGAAGAGAC+AGG - chr4_3:52155598-52155617 None:intergenic 40.0%
!!! AGTTTTTTTCGCCACATCTC+AGG + chr4_3:52155706-52155725 Msa0646400:intron 40.0%
!!! GTTTTTTTCGCCACATCTCA+GGG + chr4_3:52155707-52155726 Msa0646400:intron 40.0%
TTGTTGCTCGGAATTAGTGA+TGG + chr4_3:52155732-52155751 Msa0646400:intron 40.0%
TCTACGGATAAAATCCACCA+CGG + chr4_3:52155779-52155798 Msa0646400:intron 40.0%
TTTACCTACCCGCTAGTTAA+TGG + chr4_3:52155850-52155869 Msa0646400:intron 40.0%
CGGGTTTATACAGATATCCA+TGG - chr4_3:52156309-52156328 None:intergenic 40.0%
TGGATATCTGTATAAACCCG+CGG + chr4_3:52156309-52156328 Msa0646400:intron 40.0%
TACATGGATATCCATGGATG+CGG - chr4_3:52156441-52156460 None:intergenic 40.0%
TATCCATGTACATCCCTACT+CGG + chr4_3:52156451-52156470 Msa0646400:intron 40.0%
TTTGTATCCCAAACACAACC+AGG - chr4_3:52156538-52156557 None:intergenic 40.0%
CCAAATGCGTACAATTCCAT+CGG - chr4_3:52156596-52156615 None:intergenic 40.0%
ACGCATTTGGACTGTAAATC+AGG + chr4_3:52156606-52156625 Msa0646400:CDS 40.0%
TTGAAATTGGAGGAGTTACC+AGG + chr4_3:52157012-52157031 Msa0646400:CDS 40.0%
ACATAATTCGACAACCCATC+TGG + chr4_3:52157161-52157180 Msa0646400:intron 40.0%
TTGTGAACAGGAACTTCTGA+TGG + chr4_3:52157184-52157203 Msa0646400:intron 40.0%
! CCTCTCTGACAACTTTTGTT+TGG - chr4_3:52157210-52157229 None:intergenic 40.0%
CCAAACAAAAGTTGTCAGAG+AGG + chr4_3:52157207-52157226 Msa0646400:CDS 40.0%
GAACATGGCAGAACAGAAAT+GGG + chr4_3:52157255-52157274 Msa0646400:CDS 40.0%
TCAAGGGAACAGAATTACAG+AGG - chr4_3:52157299-52157318 None:intergenic 40.0%
CAGAACTTGGGATTGATCAA+GGG - chr4_3:52157315-52157334 None:intergenic 40.0%
TATTTGGCACTGCAGAACTT+GGG - chr4_3:52157327-52157346 None:intergenic 40.0%
ATATTTGGCACTGCAGAACT+TGG - chr4_3:52157328-52157347 None:intergenic 40.0%
TGGCTATTCAGTGTTTGATG+TGG + chr4_3:52157546-52157565 Msa0646400:intron 40.0%
TTGTATGGCAACTTCCTGAT+AGG - chr4_3:52157589-52157608 None:intergenic 40.0%
TTTGTACCTGATCGGTTGTA+TGG - chr4_3:52157604-52157623 None:intergenic 40.0%
GACAGTAACATCAATTGTCG+TGG - chr4_3:52157687-52157706 None:intergenic 40.0%
CAACCAACAACTGGTATGTT+AGG + chr4_3:52157912-52157931 Msa0646400:intron 40.0%
TACTGTGACTTAAGACGTCA+AGG - chr4_3:52158097-52158116 None:intergenic 40.0%
TAGGACTTTAGATTGCAGAG+AGG + chr4_3:52158142-52158161 Msa0646400:intron 40.0%
GCAGCATCATATGCATTATC+TGG - chr4_3:52158536-52158555 None:intergenic 40.0%
TGCTGATAAATGGCTACTCA+AGG + chr4_3:52158553-52158572 Msa0646400:CDS 40.0%
TGATAAATGGCTACTCAAGG+AGG + chr4_3:52158556-52158575 Msa0646400:CDS 40.0%
GATAAATGGCTACTCAAGGA+GGG + chr4_3:52158557-52158576 Msa0646400:CDS 40.0%
ACTTGCTCACGAAAAGAAAG+AGG - chr4_3:52158587-52158606 None:intergenic 40.0%
TAATTACCAGATGTGCGAGA+AGG - chr4_3:52158821-52158840 None:intergenic 40.0%
! TGTGAATGAAAGCACACCTT+AGG - chr4_3:52158980-52158999 None:intergenic 40.0%
TGGAAGTTGCTGATATAGTC+TGG + chr4_3:52159006-52159025 Msa0646400:intron 40.0%
AAGTTGCTGATATAGTCTGG+AGG + chr4_3:52159009-52159028 Msa0646400:intron 40.0%
AGTTGCTGATATAGTCTGGA+GGG + chr4_3:52159010-52159029 Msa0646400:intron 40.0%
CTGGGTTTGACTAACGTATT+GGG - chr4_3:52159161-52159180 None:intergenic 40.0%
GGATACCTTGATTCTGTTCA+AGG + chr4_3:52159350-52159369 Msa0646400:intron 40.0%
!! ATTGGCCTTGAACAGAATCA+AGG - chr4_3:52159358-52159377 None:intergenic 40.0%
GATTCTGTTCAAGGCCAATA+TGG + chr4_3:52159359-52159378 Msa0646400:intron 40.0%
CAAGTGTTTGATCCAACTTG+TGG + chr4_3:52159591-52159610 Msa0646400:intron 40.0%
CAATAAGGAGGTTTGAGCAT+TGG - chr4_3:52159666-52159685 None:intergenic 40.0%
! TATGTAGCTCTGCAATAAGG+AGG - chr4_3:52159678-52159697 None:intergenic 40.0%
TTCCTAGGAATAACATACCG+TGG + chr4_3:52160017-52160036 Msa0646400:intron 40.0%
TTCCACGGTATGTTATTCCT+AGG - chr4_3:52160022-52160041 None:intergenic 40.0%
ACTCCCGACTTTATATTCCA+CGG - chr4_3:52160037-52160056 None:intergenic 40.0%
TCACCTACAATGTTAAGGAC+TGG + chr4_3:52160317-52160336 Msa0646400:intron 40.0%
CACCTACAATGTTAAGGACT+GGG + chr4_3:52160318-52160337 Msa0646400:intron 40.0%
ACCTACAATGTTAAGGACTG+GGG + chr4_3:52160319-52160338 Msa0646400:intron 40.0%
!!! ATGCCTTTTGCTGTTAGACA+CGG + chr4_3:52160397-52160416 Msa0646400:intron 40.0%
!! GGTGCTATTGTCAATCTCAT+AGG + chr4_3:52160648-52160667 Msa0646400:intron 40.0%
CCAGGAAATATCATTGTGGT+TGG - chr4_3:52160817-52160836 None:intergenic 40.0%
CCAACCACAATGATATTTCC+TGG + chr4_3:52160814-52160833 Msa0646400:CDS 40.0%
TCTTAATCAGTACACTTCCC+TGG + chr4_3:52160926-52160945 Msa0646400:intron 40.0%
!! TTCCCTGGTCTTAAGGAAAA+TGG + chr4_3:52160941-52160960 Msa0646400:intron 40.0%
ATACTAGACGAGTTACGGTT+AGG + chr4_3:52161329-52161348 Msa0646400:intron 40.0%
AGATGGTTGCATCTCAACTT+TGG + chr4_3:52161374-52161393 Msa0646400:intron 40.0%
! GTTTCTCCTACAGCTTTTCT+TGG - chr4_3:52161492-52161511 None:intergenic 40.0%
! CAACTAAGTCTTATCCCACT+AGG - chr4_3:52161606-52161625 None:intergenic 40.0%
ACAGATTTGCAGGAATCGTT+GGG - chr4_3:52161741-52161760 None:intergenic 40.0%
AACAGATTTGCAGGAATCGT+TGG - chr4_3:52161742-52161761 None:intergenic 40.0%
GAAGGAGGTTGAAGAAGCAA+AGG + chr4_3:52152779-52152798 Msa0646400:five_prime_UTR 45.0%
GAAGCAAAGGACTTTGGGTA+AGG + chr4_3:52152792-52152811 Msa0646400:five_prime_UTR 45.0%
CGTGAAGTTCACAGCGTAAT+TGG - chr4_3:52152889-52152908 None:intergenic 45.0%
TGGCATGGATACTCTTGTGT+TGG + chr4_3:52153120-52153139 Msa0646400:CDS 45.0%
GGACTTGAATAGTGGTGAGA+AGG + chr4_3:52153147-52153166 Msa0646400:CDS 45.0%
! GAGAAGGTGCAGAGTCTTAA+AGG + chr4_3:52153163-52153182 Msa0646400:CDS 45.0%
GGTCATCAATTGCAGGTTAC+TGG + chr4_3:52153184-52153203 Msa0646400:CDS 45.0%
TCAGGTGCTTAAGTAAGTGG+TGG + chr4_3:52153367-52153386 Msa0646400:intron 45.0%
CAGGTGCTTAAGTAAGTGGT+GGG + chr4_3:52153368-52153387 Msa0646400:intron 45.0%
TCTTGCGTAGGGTGAAAACT+TGG + chr4_3:52153406-52153425 Msa0646400:intron 45.0%
ATTCACTTTCTGTGCTCCAC+AGG + chr4_3:52153453-52153472 Msa0646400:intron 45.0%
AATCTCCGTCATTGAACCTG+TGG - chr4_3:52153472-52153491 None:intergenic 45.0%
GTGGAAATTGTTGGGTCATG+AGG + chr4_3:52153510-52153529 Msa0646400:intron 45.0%
GGAAATTGTTGGGTCATGAG+GGG + chr4_3:52153512-52153531 Msa0646400:intron 45.0%
! GTAAGATCAGCGCTTTTGTG+TGG + chr4_3:52153590-52153609 Msa0646400:intron 45.0%
TGGAGATGTGGATGTTATGC+TGG + chr4_3:52153650-52153669 Msa0646400:intron 45.0%
AGAGAGAGAGAGAGAGAGAT+GGG + chr4_3:52153781-52153800 Msa0646400:intron 45.0%
!! ACTAAGTAGTGTCGGCTACA+TGG - chr4_3:52154026-52154045 None:intergenic 45.0%
ATGTAGCCGACACTACTTAG+TGG + chr4_3:52154025-52154044 Msa0646400:intron 45.0%
TGTAGCCGACACTACTTAGT+GGG + chr4_3:52154026-52154045 Msa0646400:intron 45.0%
! TGTGTAGTACTTTGAGGAGG+TGG + chr4_3:52154203-52154222 Msa0646400:intron 45.0%
ATGGGCAATGCATAGAGACA+TGG + chr4_3:52154230-52154249 Msa0646400:CDS 45.0%
TGGGCAATGCATAGAGACAT+GGG + chr4_3:52154231-52154250 Msa0646400:CDS 45.0%
GCAGTTATAAAGCTACCCAC+AGG + chr4_3:52154277-52154296 Msa0646400:CDS 45.0%
TTTCTATGAGTGGCGAGGAA+TGG + chr4_3:52154619-52154638 Msa0646400:intron 45.0%
TACAGATACTGTTCGTGGCT+TGG + chr4_3:52154848-52154867 Msa0646400:intron 45.0%
TTGGCTGTGATGTCTGATCT+TGG + chr4_3:52154867-52154886 Msa0646400:CDS 45.0%
ACCCATCATGAGATGCAGAT+AGG - chr4_3:52154896-52154915 None:intergenic 45.0%
! TATCTGCATCTCATGATGGG+TGG + chr4_3:52154895-52154914 Msa0646400:intron 45.0%
!! ATCTGCATCTCATGATGGGT+GGG + chr4_3:52154896-52154915 Msa0646400:intron 45.0%
CTGAGATTATGGGCAGTAAG+TGG + chr4_3:52155024-52155043 Msa0646400:CDS 45.0%
GCATCAGGACTTATTGTCAG+TGG + chr4_3:52155105-52155124 Msa0646400:CDS 45.0%
!!! GGGGGAATTTTTTGTTGTGG+GGG + chr4_3:52155304-52155323 Msa0646400:intron 45.0%
!!! TTTTTTGTTGTGGGGGTAGG+GGG + chr4_3:52155311-52155330 Msa0646400:intron 45.0%
TGTTGGCCGGAATAAGGAAT+GGG - chr4_3:52155343-52155362 None:intergenic 45.0%
TACAACTGTTGGCCGGAATA+AGG - chr4_3:52155349-52155368 None:intergenic 45.0%
CTTTCACAATCCGTAGCTTC+AGG + chr4_3:52155416-52155435 Msa0646400:intron 45.0%
ATCAAATTGCCGTGCATGTG+AGG + chr4_3:52155617-52155636 Msa0646400:intron 45.0%
ATAAAACGGATGCGTTCGAG+TGG - chr4_3:52155666-52155685 None:intergenic 45.0%
! TACCCGCTAGTTAATGGACA+CGG + chr4_3:52155856-52155875 Msa0646400:intron 45.0%
ATCCGTGTCCATTAACTAGC+GGG - chr4_3:52155861-52155880 None:intergenic 45.0%
CATCCGTGTCCATTAACTAG+CGG - chr4_3:52155862-52155881 None:intergenic 45.0%
! CTAGTTAATGGACACGGATG+CGG + chr4_3:52155862-52155881 Msa0646400:intron 45.0%
TTTAATGGTATCCACACCCG+CGG + chr4_3:52155886-52155905 Msa0646400:intron 45.0%
!! ACTCGGTTTAATAGCGGGTA+TGG - chr4_3:52155916-52155935 None:intergenic 45.0%
AACAGATATCCGCACGGATA+TGG + chr4_3:52156361-52156380 Msa0646400:intron 45.0%
ATATCCGCACGGATATGGAT+AGG + chr4_3:52156366-52156385 Msa0646400:intron 45.0%
TATCCGCACGGATATGGATA+GGG + chr4_3:52156367-52156386 Msa0646400:intron 45.0%
TATCACACTATCCGCATCCA+TGG + chr4_3:52156427-52156446 Msa0646400:intron 45.0%
GGGATGTACATGGATATCCA+TGG - chr4_3:52156447-52156466 None:intergenic 45.0%
ATTCCGAGTAGGGATGTACA+TGG - chr4_3:52156457-52156476 None:intergenic 45.0%
! TAGAGCATCCTGGTTGTGTT+TGG + chr4_3:52156527-52156546 Msa0646400:intron 45.0%
! AGAGCATCCTGGTTGTGTTT+GGG + chr4_3:52156528-52156547 Msa0646400:intron 45.0%
ATTGTGACAGCATGTTCCGA+TGG + chr4_3:52156577-52156596 Msa0646400:intron 45.0%
CCGATGGAATTGTACGCATT+TGG + chr4_3:52156593-52156612 Msa0646400:CDS 45.0%
TATGCTAGAAAGAGGGTTGG+AGG + chr4_3:52156988-52157007 Msa0646400:intron 45.0%
GAGGGTTGGAGGATTGAAAT+TGG + chr4_3:52156999-52157018 Msa0646400:CDS 45.0%
GGTTGGAGGATTGAAATTGG+AGG + chr4_3:52157002-52157021 Msa0646400:CDS 45.0%
ATCTTCAGTGTATCCAAGCC+TGG - chr4_3:52157033-52157052 None:intergenic 45.0%
TTGGATACACTGAAGATCCC+AGG + chr4_3:52157036-52157055 Msa0646400:CDS 45.0%
GTTCCTGTTCACAACCAGAT+GGG - chr4_3:52157178-52157197 None:intergenic 45.0%
AGTTCCTGTTCACAACCAGA+TGG - chr4_3:52157179-52157198 None:intergenic 45.0%
GTTGTCAGAGAGGGAGATAA+CGG + chr4_3:52157217-52157236 Msa0646400:CDS 45.0%
! ATAACGGAGTTGCGTATGCA+TGG + chr4_3:52157233-52157252 Msa0646400:CDS 45.0%
AGTTGCGTATGCATGGAACA+TGG + chr4_3:52157240-52157259 Msa0646400:CDS 45.0%
GGAACATGGCAGAACAGAAA+TGG + chr4_3:52157254-52157273 Msa0646400:CDS 45.0%
GCAGAACTTGGGATTGATCA+AGG - chr4_3:52157316-52157335 None:intergenic 45.0%
AGAGGGCGATTTGATTCTTC+AGG - chr4_3:52157422-52157441 None:intergenic 45.0%
ACTGAACACCATCGAAGAGA+GGG - chr4_3:52157439-52157458 None:intergenic 45.0%
TACTGAACACCATCGAAGAG+AGG - chr4_3:52157440-52157459 None:intergenic 45.0%
TTGGAGATGGTATGCCTATC+AGG + chr4_3:52157572-52157591 Msa0646400:CDS 45.0%
AAGTTGCCATACAACCGATC+AGG + chr4_3:52157595-52157614 Msa0646400:CDS 45.0%
CAGCCTAACATACCAGTTGT+TGG - chr4_3:52157918-52157937 None:intergenic 45.0%
GGGCTTAGGAATGATGTGTT+AGG + chr4_3:52158257-52158276 Msa0646400:intron 45.0%
TTCATAGGGTTGCGTAACGA+GGG - chr4_3:52158418-52158437 None:intergenic 45.0%
ATTCATAGGGTTGCGTAACG+AGG - chr4_3:52158419-52158438 None:intergenic 45.0%
TCATTTCGTGATCCGTACAC+CGG + chr4_3:52158659-52158678 Msa0646400:CDS 45.0%
TTGTACTTACAGCCGGTGTA+CGG - chr4_3:52158674-52158693 None:intergenic 45.0%
TTGACCTGGTACGTAAGCAT+TGG - chr4_3:52158798-52158817 None:intergenic 45.0%
CCTGGGTTTGACTAACGTAT+TGG - chr4_3:52159162-52159181 None:intergenic 45.0%
CCAATACGTTAGTCAAACCC+AGG + chr4_3:52159159-52159178 Msa0646400:intron 45.0%
AAACCCAGGTTATGTCGCAA+AGG + chr4_3:52159173-52159192 Msa0646400:intron 45.0%
TTCAAGGCCAATATGGCTCT+AGG + chr4_3:52159366-52159385 Msa0646400:intron 45.0%
CAAGCATCCCTTTCTGACAA+TGG - chr4_3:52159794-52159813 None:intergenic 45.0%
! TAATGCCTTATTGTCCGACC+AGG + chr4_3:52159866-52159885 Msa0646400:CDS 45.0%
AATCATGTAGCCAACCTGGT+CGG - chr4_3:52159883-52159902 None:intergenic 45.0%
AACCAATCATGTAGCCAACC+TGG - chr4_3:52159887-52159906 None:intergenic 45.0%
!! CTTAGGGGGTGTTTGTTTCA+TGG + chr4_3:52159982-52160001 Msa0646400:intron 45.0%
AAAGTCGGGAGTTTGATTCC+TGG + chr4_3:52160045-52160064 Msa0646400:intron 45.0%
AAGTCGGGAGTTTGATTCCT+GGG + chr4_3:52160046-52160065 Msa0646400:intron 45.0%
TCCACTTTCCACCCTTAACA+TGG + chr4_3:52160164-52160183 Msa0646400:intron 45.0%
CCACTTTCCACCCTTAACAT+GGG + chr4_3:52160165-52160184 Msa0646400:intron 45.0%
TCTTGGGTATAACGGTTCCT+GGG - chr4_3:52160225-52160244 None:intergenic 45.0%
ATCTTGGGTATAACGGTTCC+TGG - chr4_3:52160226-52160245 None:intergenic 45.0%
ATTCCTGGGAATACATGGGT+GGG - chr4_3:52160292-52160311 None:intergenic 45.0%
TCCCCAGTCCTTAACATTGT+AGG - chr4_3:52160323-52160342 None:intergenic 45.0%
!!! TGCCTTTTGCTGTTAGACAC+GGG + chr4_3:52160398-52160417 Msa0646400:intron 45.0%
! GCCAGGATTTTCTGTGTCTA+CGG + chr4_3:52160521-52160540 Msa0646400:intron 45.0%
TCCGTAGACACAGAAAATCC+TGG - chr4_3:52160525-52160544 None:intergenic 45.0%
GAAGTTGTCTTTGACCGAGT+TGG + chr4_3:52160678-52160697 Msa0646400:CDS 45.0%
CAGTCTGGTAACATCCAACT+CGG - chr4_3:52160695-52160714 None:intergenic 45.0%
TTTAACAGTGGCATCCAGTC+TGG - chr4_3:52160710-52160729 None:intergenic 45.0%
!! AGTACACTTCCCTGGTCTTA+AGG + chr4_3:52160934-52160953 Msa0646400:intron 45.0%
ATGGTAGTTCTTCACCCAGA+CGG + chr4_3:52161016-52161035 Msa0646400:CDS 45.0%
AGATCGGAATGTTGTGCTAG+AGG + chr4_3:52161299-52161318 Msa0646400:intron 45.0%
TGGTTGCATCTCAACTTTGG+TGG + chr4_3:52161377-52161396 Msa0646400:intron 45.0%
! GCATCTCAACTTTGGTGGTT+TGG + chr4_3:52161382-52161401 Msa0646400:intron 45.0%
! TTTGGTGGTTTGGACATGTC+TGG + chr4_3:52161392-52161411 Msa0646400:intron 45.0%
! GGTTGGCTACAAGGATCAAA+TGG - chr4_3:52161580-52161599 None:intergenic 45.0%
! AAGTCTTATCCCACTAGGTG+AGG - chr4_3:52161601-52161620 None:intergenic 45.0%
TGCAGGAATCGTTGGGTTTA+TGG - chr4_3:52161734-52161753 None:intergenic 45.0%
!!! AAATTTGTTTAATTTTTTTT+AGG - chr4_3:52156260-52156279 None:intergenic 5.0%
!! ATATAATAATAATAAATTGA+CGG + chr4_3:52158698-52158717 Msa0646400:intron 5.0%
!!! TTTTGAATAAAATAAAATAA+AGG + chr4_3:52159113-52159132 Msa0646400:intron 5.0%
!! ATTACATATTAATAATTAAT+GGG - chr4_3:52159926-52159945 None:intergenic 5.0%
!! TATTACATATTAATAATTAA+TGG - chr4_3:52159927-52159946 None:intergenic 5.0%
! CTCTCTCGCTCTCTCTAGAA+TGG + chr4_3:52152844-52152863 Msa0646400:exon 50.0%
GTTCGCGGAATAACCATCTG+CGG + chr4_3:52152923-52152942 Msa0646400:CDS 50.0%
CATCGCGTGACAAAACGGTT+AGG + chr4_3:52152972-52152991 Msa0646400:CDS 50.0%
!! TGGTGTTGTTTCTGGTGGCA+TGG + chr4_3:52153105-52153124 Msa0646400:CDS 50.0%
! GTGCTTAAGTAAGTGGTGGG+AGG + chr4_3:52153371-52153390 Msa0646400:intron 50.0%
GTGCTCCACAGGTTCAATGA+CGG + chr4_3:52153464-52153483 Msa0646400:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr4_3:52153726-52153745 Msa0646400:intron 50.0%
! AAGTGGTTTGGGCATGTAGC+CGG + chr4_3:52153843-52153862 Msa0646400:intron 50.0%
! GTAGTACTTTGAGGAGGTGG+AGG + chr4_3:52154206-52154225 Msa0646400:intron 50.0%
! ACTTTGAGGAGGTGGAGGAA+TGG + chr4_3:52154211-52154230 Msa0646400:CDS 50.0%
! CTTTGAGGAGGTGGAGGAAT+GGG + chr4_3:52154212-52154231 Msa0646400:CDS 50.0%
GCAATGCATAGAGACATGGG+AGG + chr4_3:52154234-52154253 Msa0646400:CDS 50.0%
CCTGTAACAAGCTCTCCTGT+GGG - chr4_3:52154295-52154314 None:intergenic 50.0%
ACCTGTAACAAGCTCTCCTG+TGG - chr4_3:52154296-52154315 None:intergenic 50.0%
! TGGTCCGTGCCTTCGATTTT+AGG + chr4_3:52154665-52154684 Msa0646400:intron 50.0%
! TTTTATGCTGCCAGGGAGTG+CGG + chr4_3:52154750-52154769 Msa0646400:intron 50.0%
CAAAAATATGCCGCACTCCC+TGG - chr4_3:52154763-52154782 None:intergenic 50.0%
TGAATGCCTTGCTCTGCATC+AGG + chr4_3:52154957-52154976 Msa0646400:intron 50.0%
CTGTTGGCCGGAATAAGGAA+TGG - chr4_3:52155344-52155363 None:intergenic 50.0%
TGAAAGTTGCAGCTGAGCTG+TGG - chr4_3:52155402-52155421 None:intergenic 50.0%
AGCAACAAGTCCCTGAGATG+TGG - chr4_3:52155720-52155739 None:intergenic 50.0%
!! CATCTCAGGGACTTGTTGCT+CGG + chr4_3:52155720-52155739 Msa0646400:intron 50.0%
AAAATCCACCACGGACACAG+CGG + chr4_3:52155788-52155807 Msa0646400:intron 50.0%
GGACACAGCGGATACCTTAA+TGG + chr4_3:52155800-52155819 Msa0646400:intron 50.0%
! GTGTCCATTAACTAGCGGGT+AGG - chr4_3:52155857-52155876 None:intergenic 50.0%
GGACACGGATGCGGATTTAA+TGG + chr4_3:52155871-52155890 Msa0646400:intron 50.0%
!! ATAGCGGGTATGGATATCCG+CGG - chr4_3:52155906-52155925 None:intergenic 50.0%
! TCTGTTTAGCGGGTAATCCG+CGG - chr4_3:52156347-52156366 None:intergenic 50.0%
CGTGCGGATATCTGTTTAGC+GGG - chr4_3:52156357-52156376 None:intergenic 50.0%
CCGTGCGGATATCTGTTTAG+CGG - chr4_3:52156358-52156377 None:intergenic 50.0%
CCGCTAAACAGATATCCGCA+CGG + chr4_3:52156355-52156374 Msa0646400:intron 50.0%
GTACCCTATCCATATCCGTG+CGG - chr4_3:52156373-52156392 None:intergenic 50.0%
GCACGGATATGGATAGGGTA+CGG + chr4_3:52156372-52156391 Msa0646400:intron 50.0%
TTTATCCAACGGAGCGGACA+CGG + chr4_3:52156403-52156422 Msa0646400:intron 50.0%
! GTTCAGAGCATAGAGCATCC+TGG + chr4_3:52156517-52156536 Msa0646400:intron 50.0%
ATTGGAGGAGTTACCAGGCT+TGG + chr4_3:52157017-52157036 Msa0646400:CDS 50.0%
CAACCCATCTGGTTGTGAAC+AGG + chr4_3:52157172-52157191 Msa0646400:intron 50.0%
TCAAATCGCCCTCTCTTCGA+TGG + chr4_3:52157428-52157447 Msa0646400:CDS 50.0%
GGGTCAAGTCAACCAACAAC+TGG + chr4_3:52157903-52157922 Msa0646400:intron 50.0%
TCAGCCAATGCTTACGTACC+AGG + chr4_3:52158791-52158810 Msa0646400:intron 50.0%
!! AAGGCCAATATGGCTCTAGG+TGG + chr4_3:52159369-52159388 Msa0646400:intron 50.0%
AGCTCCACCTAGAGCCATAT+TGG - chr4_3:52159376-52159395 None:intergenic 50.0%
! GACCAGGTTGGCTACATGAT+TGG + chr4_3:52159882-52159901 Msa0646400:intron 50.0%
CCCATGTTAAGGGTGGAAAG+TGG - chr4_3:52160168-52160187 None:intergenic 50.0%
CATTCCTGGGAATACATGGG+TGG - chr4_3:52160293-52160312 None:intergenic 50.0%
GTCCCGTGTCTAACAGCAAA+AGG - chr4_3:52160403-52160422 None:intergenic 50.0%
! CGAGTTGGATGTTACCAGAC+TGG + chr4_3:52160693-52160712 Msa0646400:CDS 50.0%
TGGTAGTTCTTCACCCAGAC+GGG + chr4_3:52161017-52161036 Msa0646400:CDS 50.0%
GGAAGGCCAAGAAAAGCTGT+AGG + chr4_3:52161483-52161502 Msa0646400:intron 50.0%
! ACTAGGTGAGGTTGGCTACA+AGG - chr4_3:52161589-52161608 None:intergenic 50.0%
TTGTAGCCAACCTCACCTAG+TGG + chr4_3:52161588-52161607 Msa0646400:intron 50.0%
TGTAGCCAACCTCACCTAGT+GGG + chr4_3:52161589-52161608 Msa0646400:intron 50.0%
CTTATCCCACTAGGTGAGGT+TGG - chr4_3:52161597-52161616 None:intergenic 50.0%
TGTGGCAAATCAGGGTTCGG+TGG - chr4_3:52153082-52153101 None:intergenic 55.0%
CCGTGTGGCAAATCAGGGTT+CGG - chr4_3:52153085-52153104 None:intergenic 55.0%
! CCGAACCCTGATTTGCCACA+CGG + chr4_3:52153082-52153101 Msa0646400:CDS 55.0%
! AACCCTGATTTGCCACACGG+TGG + chr4_3:52153085-52153104 Msa0646400:CDS 55.0%
CACCACCGTGTGGCAAATCA+GGG - chr4_3:52153090-52153109 None:intergenic 55.0%
ACACCACCGTGTGGCAAATC+AGG - chr4_3:52153091-52153110 None:intergenic 55.0%
CCAGAAACAACACCACCGTG+TGG - chr4_3:52153100-52153119 None:intergenic 55.0%
!! CCACACGGTGGTGTTGTTTC+TGG + chr4_3:52153097-52153116 Msa0646400:CDS 55.0%
!! CACGGTGGTGTTGTTTCTGG+TGG + chr4_3:52153100-52153119 Msa0646400:CDS 55.0%
AGAGACATGGGAGGCTCACA+AGG + chr4_3:52154243-52154262 Msa0646400:CDS 55.0%
GAGACATGGGAGGCTCACAA+GGG + chr4_3:52154244-52154263 Msa0646400:CDS 55.0%
AGACATGGGAGGCTCACAAG+GGG + chr4_3:52154245-52154264 Msa0646400:CDS 55.0%
!! CCCACAGGAGAGCTTGTTAC+AGG + chr4_3:52154292-52154311 Msa0646400:CDS 55.0%
CCCTAGATGCCTCACATGCA+CGG - chr4_3:52155629-52155648 None:intergenic 55.0%
! CCGTGCATGTGAGGCATCTA+GGG + chr4_3:52155626-52155645 Msa0646400:intron 55.0%
GGCAAAAAAATCCGCACCCG+TGG + chr4_3:52155753-52155772 Msa0646400:intron 55.0%
TCCGCACCCGTGGATATCTA+CGG + chr4_3:52155763-52155782 Msa0646400:intron 55.0%
TCCGTAGATATCCACGGGTG+CGG - chr4_3:52155767-52155786 None:intergenic 55.0%
! TAAGGTATCCGCTGTGTCCG+TGG - chr4_3:52155799-52155818 None:intergenic 55.0%
! TAGCGGGTATGGATATCCGC+GGG - chr4_3:52155905-52155924 None:intergenic 55.0%
!!! GCGGATTTTGAGGTATCCGC+GGG - chr4_3:52156328-52156347 None:intergenic 55.0%
!!! CGCGGATTTTGAGGTATCCG+CGG - chr4_3:52156329-52156348 None:intergenic 55.0%
CGCGGATACCTCAAAATCCG+CGG + chr4_3:52156327-52156346 Msa0646400:intron 55.0%
! CGGGTAATCCGCGGATTTTG+AGG - chr4_3:52156338-52156357 None:intergenic 55.0%
GGTTGCGTAACGAGGGCAAA+AGG - chr4_3:52158411-52158430 None:intergenic 55.0%
GATGTGCGAGAAGGTTGACC+TGG - chr4_3:52158812-52158831 None:intergenic 55.0%
GGTCAACCTTCTCGCACATC+TGG + chr4_3:52158812-52158831 Msa0646400:CDS 55.0%
GCGCCTTTGCGACATAACCT+GGG - chr4_3:52159179-52159198 None:intergenic 55.0%
TGCGCCTTTGCGACATAACC+TGG - chr4_3:52159180-52159199 None:intergenic 55.0%
! GCCTTATTGTCCGACCAGGT+TGG + chr4_3:52159870-52159889 Msa0646400:intron 55.0%
GCCAACCTGGTCGGACAATA+AGG - chr4_3:52159874-52159893 None:intergenic 55.0%
GGGTGGAAAGTGGAATCCTG+TGG - chr4_3:52160158-52160177 None:intergenic 55.0%
TTGCCCACCCATGTATTCCC+AGG + chr4_3:52160286-52160305 Msa0646400:intron 55.0%
GGTAGTTCTTCACCCAGACG+GGG + chr4_3:52161018-52161037 Msa0646400:CDS 55.0%
GAAGTGCAATAGCCCCGTCT+GGG - chr4_3:52161033-52161052 None:intergenic 55.0%
TGAAGTGCAATAGCCCCGTC+TGG - chr4_3:52161034-52161053 None:intergenic 55.0%
CAATCGCTCGAGGTAGAGGA+AGG + chr4_3:52161466-52161485 Msa0646400:intron 55.0%
!! GTTGCAGAAGCATCGCAGTG+AGG + chr4_3:52161816-52161835 Msa0646400:CDS 55.0%
TTCCGCGAACGTCGTCTTCG+TGG - chr4_3:52152913-52152932 None:intergenic 60.0%
CGCGGAATAACCATCTGCGG+CGG + chr4_3:52152926-52152945 Msa0646400:CDS 60.0%
! TGGTTTGGGCATGTAGCCGG+AGG + chr4_3:52153846-52153865 Msa0646400:intron 60.0%
! GCCGTGCATGTGAGGCATCT+AGG + chr4_3:52155625-52155644 Msa0646400:intron 60.0%
GGTATGGATATCCGCGGGTG+TGG - chr4_3:52155900-52155919 None:intergenic 60.0%
GATATCCGTGTCCGCTCCGT+TGG - chr4_3:52156411-52156430 None:intergenic 60.0%
AAGGTCAGGGCAATCGCTCG+AGG + chr4_3:52161456-52161475 Msa0646400:intron 60.0%
AGGGCAATCGCTCGAGGTAG+AGG + chr4_3:52161462-52161481 Msa0646400:intron 60.0%
GGCCACGAAGACGACGTTCG+CGG + chr4_3:52152908-52152927 Msa0646400:CDS 65.0%
ACCATCTGCGGCGGCGACAA+CGG + chr4_3:52152935-52152954 Msa0646400:CDS 65.0%
GGTATCCGCTGTGTCCGTGG+TGG - chr4_3:52155796-52155815 None:intergenic 65.0%
ATCTGCGGCGGCGACAACGG+CGG + chr4_3:52152938-52152957 Msa0646400:CDS 70.0%
GCCGTTGTCGCCGCCGCAGA+TGG - chr4_3:52152939-52152958 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 52152776 52161894 52152776 ID=Msa0646400;Name=Msa0646400
chr4_3 mRNA 52152776 52161894 52152776 ID=Msa0646400-mRNA-1;Parent=Msa0646400;Name=Msa0646400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=87|0.81|0.76|1|1|0.94|17|0|642
chr4_3 exon 52152776 52153251 52152776 ID=Msa0646400-mRNA-1:exon:12706;Parent=Msa0646400-mRNA-1
chr4_3 exon 52154210 52154313 52154210 ID=Msa0646400-mRNA-1:exon:12707;Parent=Msa0646400-mRNA-1
chr4_3 exon 52154450 52154518 52154450 ID=Msa0646400-mRNA-1:exon:12708;Parent=Msa0646400-mRNA-1
chr4_3 exon 52154853 52154913 52154853 ID=Msa0646400-mRNA-1:exon:12709;Parent=Msa0646400-mRNA-1
chr4_3 exon 52155020 52155159 52155020 ID=Msa0646400-mRNA-1:exon:12710;Parent=Msa0646400-mRNA-1
chr4_3 exon 52156587 52156695 52156587 ID=Msa0646400-mRNA-1:exon:12711;Parent=Msa0646400-mRNA-1
chr4_3 exon 52156996 52157057 52156996 ID=Msa0646400-mRNA-1:exon:12712;Parent=Msa0646400-mRNA-1
chr4_3 exon 52157194 52157282 52157194 ID=Msa0646400-mRNA-1:exon:12713;Parent=Msa0646400-mRNA-1
chr4_3 exon 52157398 52157472 52157398 ID=Msa0646400-mRNA-1:exon:12714;Parent=Msa0646400-mRNA-1
chr4_3 exon 52157557 52157616 52157557 ID=Msa0646400-mRNA-1:exon:12715;Parent=Msa0646400-mRNA-1
chr4_3 exon 52158515 52158683 52158515 ID=Msa0646400-mRNA-1:exon:12716;Parent=Msa0646400-mRNA-1
chr4_3 exon 52158795 52158833 52158795 ID=Msa0646400-mRNA-1:exon:12717;Parent=Msa0646400-mRNA-1
chr4_3 exon 52158945 52158982 52158945 ID=Msa0646400-mRNA-1:exon:12718;Parent=Msa0646400-mRNA-1
chr4_3 exon 52159801 52159887 52159801 ID=Msa0646400-mRNA-1:exon:12719;Parent=Msa0646400-mRNA-1
chr4_3 exon 52160670 52160835 52160670 ID=Msa0646400-mRNA-1:exon:12720;Parent=Msa0646400-mRNA-1
chr4_3 exon 52160999 52161076 52160999 ID=Msa0646400-mRNA-1:exon:12721;Parent=Msa0646400-mRNA-1
chr4_3 exon 52161701 52161894 52161701 ID=Msa0646400-mRNA-1:exon:12722;Parent=Msa0646400-mRNA-1
chr4_3 five_prime_UTR 52152776 52152862 52152776 ID=Msa0646400-mRNA-1:five_prime_utr;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52152863 52153251 52152863 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52154210 52154313 52154210 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52154450 52154518 52154450 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52154853 52154913 52154853 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52155020 52155159 52155020 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52156587 52156695 52156587 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52156996 52157057 52156996 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52157194 52157282 52157194 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52157398 52157472 52157398 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52157557 52157616 52157557 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52158515 52158683 52158515 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52158795 52158833 52158795 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52158945 52158982 52158945 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52159801 52159887 52159801 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52160670 52160835 52160670 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52160999 52161076 52160999 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
chr4_3 CDS 52161701 52161894 52161701 ID=Msa0646400-mRNA-1:cds;Parent=Msa0646400-mRNA-1
Gene Sequence

>Msa0646400

ATGGACATTGATTTCAAAGAATACCAATTACGCTGTGAACTTCACGGCCACGAAGACGACGTTCGCGGAATAACCATCTGCGGCGGCGACAACGGCGGAATAGCAACTTCATCGCGTGACAAAACGGTTAGGTTATGGACTCAAGATAATCGCAAATTCGTCTTGAACAAGGTTCTTGTAGGTCACACAAGTTTTGTGGGACCTATATCATGGATTCCACCGAACCCTGATTTGCCACACGGTGGTGTTGTTTCTGGTGGCATGGATACTCTTGTGTTGGTTTGGGACTTGAATAGTGGTGAGAAGGTGCAGAGTCTTAAAGGTCATCAATTGCAGGTTACTGGTATTGTGGTTGATGATGGTGATCTTGTTTCATCTTCTATTGATTGTACTTTGAGGAGGTGGAGGAATGGGCAATGCATAGAGACATGGGAGGCTCACAAGGGGCCGATTCAAGCAGTTATAAAGCTACCCACAGGAGAGCTTGTTACAGGTTCAAGTGACACTACTTTAAAGACCTGGAAGGGCAAAACATGTTTACATACTTTTCAAGGACATGCAGATACTGTTCGTGGCTTGGCTGTGATGTCTGATCTTGGAATCCTATCTGCATCTCATGATGGTTCTCTGAGATTATGGGCAGTAAGTGGTGAAGTGTTAATGGAGATGGTTGGCCATACTGCAATTGTTTATTCAGTTGATTCACATGCATCAGGACTTATTGTCAGTGGTAGCGAAGACCGTTTTGCAAAAATATGGAAAGCATGTTCCGATGGAATTGTACGCATTTGGACTGTAAATCAGGATTATTTTGCTGACCAGCTAGAGCTTGATTTATACACTTCGCAACTTTCTCAATACAAGTCTAGTAGAAAGAGGGTTGGAGGATTGAAATTGGAGGAGTTACCAGGCTTGGATACACTGAAGATCCCAGGAACTTCTGATGGCCAAACAAAAGTTGTCAGAGAGGGAGATAACGGAGTTGCGTATGCATGGAACATGGCAGAACAGAAATGGGATAAAATTGGTGAAGTTGTTGATGGACCTGAAGAATCAAATCGCCCTCTCTTCGATGGTGTTCAGTATGATTATGGTCAGTGTTTGATGTGGATATTGGAGATGGTATGCCTATCAGGAAGTTGCCATACAACCGATCAGAAAATTGAAAAAATGTCTCCAGATAATGCATATGATGCTGCTGATAAATGGCTACTCAAGGAGGGTCTTCCTCTTTCTTTTCGTGAGCAAGTCGTACAGTTCATACTTCAAAATACTGGACAAAAAGATATTACTTTTGATGCTTCATTTCGTGATCCGTACACCGGCTCCAATGCTTACGTACCAGGTCAACCTTCTCGCACATCTGATATCTCTGCAAAGCCTACTTTCAAGCATATTCCTAAGAAAGGGATGCTTGTTTTTGATACTGCTCAATTTGATGGGATCCTTAAAAAAATTGCCGAGTTCAATAATGCCTTATTGTCCGACCAGGGAAATCAGAAGTTGTCTTTGACCGAGTTGGATGTTACCAGACTGGATGCCACTGTTAAAACACTGAAAGATACATCATATTATCATTCCAGTAAATTTGCAGAATCTGAAATAGCCTTGCTACTGAATATGCTATCTTCATGGCCAACCACAATGATATTTCCTGTAATTGATATTACAAGGATGGTAGTTCTTCACCCAGACGGGGCTATTGCACTTCAGAAGCATTTTGAATCTGAAAAAGACATTTTAATGGAAGTGATTAAGAAAGTTACCATAAACCCAACGATTCCTGCAAATCTGTTGACTAGTATTCGTGCTGTCACCAATCTCTTTAAGAATTCATGCTTCTACAACTGGTTGCAGAAGCATCGCAGTGAGGTCAGTATCATCATCATCATCATTACTATTATTATTATTTTCACCTGGATTATTTAA
Protein sequence

>Msa0646400

MDIDFKEYQLRCELHGHEDDVRGITICGGDNGGIATSSRDKTVRLWTQDNRKFVLNKVLVGHTSFVGPISWIPPNPDLPHGGVVSGGMDTLVLVWDLNSGEKVQSLKGHQLQVTGIVVDDGDLVSSSIDCTLRRWRNGQCIETWEAHKGPIQAVIKLPTGELVTGSSDTTLKTWKGKTCLHTFQGHADTVRGLAVMSDLGILSASHDGSLRLWAVSGEVLMEMVGHTAIVYSVDSHASGLIVSGSEDRFAKIWKACSDGIVRIWTVNQDYFADQLELDLYTSQLSQYKSSRKRVGGLKLEELPGLDTLKIPGTSDGQTKVVREGDNGVAYAWNMAEQKWDKIGEVVDGPEESNRPLFDGVQYDYGQCLMWILEMVCLSGSCHTTDQKIEKMSPDNAYDAADKWLLKEGLPLSFREQVVQFILQNTGQKDITFDASFRDPYTGSNAYVPGQPSRTSDISAKPTFKHIPKKGMLVFDTAQFDGILKKIAEFNNALLSDQGNQKLSLTELDVTRLDATVKTLKDTSYYHSSKFAESEIALLLNMLSSWPTTMIFPVIDITRMVVLHPDGAIALQKHFESEKDILMEVIKKVTINPTIPANLLTSIRAVTNLFKNSCFYNWLQKHRSEVSIIIIIITIIIIFTWII*