Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081940 | XP_039685750.1 | 93.438 | 701 | 20 | 2 | 1 | 677 | 1 | 699 | 0.0 | 1340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081940 | sp|F4HXL0|PLIP2_ARATH | 55.769 | 728 | 256 | 13 | 1 | 677 | 1 | 713 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081940 | A0A396JY70 | 93.438 | 701 | 20 | 2 | 1 | 677 | 1 | 699 | 0.0 | 1340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0081940 | 0.804228 | 2.388657e-49 | -8.615850e-47 |
| Msa0004480 | Msa0081940 | 0.804621 | 1.978494e-49 | -8.615850e-47 |
| Msa0010770 | Msa0081940 | 0.802460 | 5.551575e-49 | -8.615850e-47 |
| Msa0017320 | Msa0081940 | 0.836189 | 1.082662e-56 | -8.615850e-47 |
| Msa0030480 | Msa0081940 | 0.971923 | 6.208357e-134 | -8.615850e-47 |
| Msa0030530 | Msa0081940 | 0.955200 | 5.238273e-113 | -8.615850e-47 |
| Msa0033880 | Msa0081940 | 0.802275 | 6.061071e-49 | -8.615850e-47 |
| Msa0041690 | Msa0081940 | 0.806605 | 7.584942e-50 | -8.615850e-47 |
| Msa0043650 | Msa0081940 | 0.801959 | 7.039918e-49 | -8.615850e-47 |
| Msa0045550 | Msa0081940 | 0.813997 | 1.928180e-51 | -8.615850e-47 |
| Msa0047640 | Msa0081940 | 0.840884 | 6.646005e-58 | -8.615850e-47 |
| Msa0051630 | Msa0081940 | 0.806965 | 6.365607e-50 | -8.615850e-47 |
| Msa0051740 | Msa0081940 | 0.818059 | 2.388062e-52 | -8.615850e-47 |
| Msa0051750 | Msa0081940 | 0.801798 | 7.595384e-49 | -8.615850e-47 |
| Msa0071480 | Msa0081940 | 0.823048 | 1.707810e-53 | -8.615850e-47 |
| Msa0074750 | Msa0081940 | 0.820473 | 6.733868e-53 | -8.615850e-47 |
| Msa0077900 | Msa0081940 | 0.811223 | 7.795967e-51 | -8.615850e-47 |
| Msa0081650 | Msa0081940 | 0.816221 | 6.184174e-52 | -8.615850e-47 |
| Msa0081940 | Msa0082050 | 0.980792 | 4.812150e-151 | -8.615850e-47 |
| Msa0081940 | Msa0090510 | 0.811214 | 7.830370e-51 | -8.615850e-47 |
| Msa0081940 | Msa0111080 | 0.822257 | 2.610166e-53 | -8.615850e-47 |
| Msa0081940 | Msa0112270 | 0.801035 | 1.088805e-48 | -8.615850e-47 |
| Msa0081940 | Msa0119440 | 0.835863 | 1.309487e-56 | -8.615850e-47 |
| Msa0081940 | Msa0125790 | 0.803374 | 3.594348e-49 | -8.615850e-47 |
| Msa0081940 | Msa0126880 | 0.809625 | 1.724923e-50 | -8.615850e-47 |
| Msa0081940 | Msa0128430 | 0.979583 | 2.746199e-148 | -8.615850e-47 |
| Msa0081940 | Msa0136630 | 0.825858 | 3.726298e-54 | -8.615850e-47 |
| Msa0081940 | Msa0137510 | 0.839776 | 1.294517e-57 | -8.615850e-47 |
| Msa0081940 | Msa0139670 | 0.821092 | 4.852189e-53 | -8.615850e-47 |
| Msa0081940 | Msa0144420 | 0.806109 | 9.649200e-50 | -8.615850e-47 |
| Msa0081940 | Msa0144430 | 0.830896 | 2.268116e-55 | -8.615850e-47 |
| Msa0081940 | Msa0146080 | 0.827915 | 1.201686e-54 | -8.615850e-47 |
| Msa0081940 | Msa0154920 | 0.811310 | 7.462397e-51 | -8.615850e-47 |
| Msa0081940 | Msa0171980 | 0.845974 | 2.904765e-59 | -8.615850e-47 |
| Msa0081940 | Msa0174000 | 0.813026 | 3.151714e-51 | -8.615850e-47 |
| Msa0081940 | Msa0174260 | 0.804880 | 1.746404e-49 | -8.615850e-47 |
| Msa0081940 | Msa0183420 | 0.800048 | 1.729967e-48 | -8.615850e-47 |
| Msa0081940 | Msa0183910 | 0.818122 | 2.311033e-52 | -8.615850e-47 |
| Msa0081940 | Msa0187490 | 0.820001 | 8.636614e-53 | -8.615850e-47 |
| Msa0081940 | Msa0194010 | 0.817512 | 3.173620e-52 | -8.615850e-47 |
| Msa0081940 | Msa0210260 | 0.815679 | 8.171232e-52 | -8.615850e-47 |
| Msa0081940 | Msa0213430 | 0.827828 | 1.260929e-54 | -8.615850e-47 |
| Msa0081940 | Msa0225670 | 0.803094 | 4.106731e-49 | -8.615850e-47 |
| Msa0081940 | Msa0233370 | 0.818143 | 2.285406e-52 | -8.615850e-47 |
| Msa0081940 | Msa0235880 | 0.827826 | 1.262689e-54 | -8.615850e-47 |
| Msa0081940 | Msa0240270 | 0.823913 | 1.071989e-53 | -8.615850e-47 |
| Msa0081940 | Msa0244970 | 0.820566 | 6.410191e-53 | -8.615850e-47 |
| Msa0081940 | Msa0259440 | 0.840299 | 9.451520e-58 | -8.615850e-47 |
| Msa0081940 | Msa0259580 | 0.840699 | 7.427433e-58 | -8.615850e-47 |
| Msa0081940 | Msa0265600 | 0.812259 | 4.638079e-51 | -8.615850e-47 |
| Msa0081940 | Msa0273650 | 0.800557 | 1.362902e-48 | -8.615850e-47 |
| Msa0081940 | Msa0283420 | 0.806971 | 6.346112e-50 | -8.615850e-47 |
| Msa0081940 | Msa0284240 | 0.808663 | 2.772644e-50 | -8.615850e-47 |
| Msa0081940 | Msa0303460 | 0.802288 | 6.023195e-49 | -8.615850e-47 |
| Msa0081940 | Msa0303520 | 0.804953 | 1.686318e-49 | -8.615850e-47 |
| Msa0081940 | Msa0305620 | 0.840663 | 7.594776e-58 | -8.615850e-47 |
| Msa0081940 | Msa0311720 | 0.811564 | 6.572949e-51 | -8.615850e-47 |
| Msa0081940 | Msa0321690 | 0.808878 | 2.493949e-50 | -8.615850e-47 |
| Msa0081940 | Msa0347990 | 0.813145 | 2.967843e-51 | -8.615850e-47 |
| Msa0081940 | Msa0358110 | 0.847508 | 1.106209e-59 | -8.615850e-47 |
| Msa0081940 | Msa0358120 | 0.806511 | 7.938088e-50 | -8.615850e-47 |
| Msa0081940 | Msa0363060 | 0.800262 | 1.564917e-48 | -8.615850e-47 |
| Msa0081940 | Msa0376600 | 0.813916 | 2.008726e-51 | -8.615850e-47 |
| Msa0081940 | Msa0378010 | 0.804781 | 1.831735e-49 | -8.615850e-47 |
| Msa0081940 | Msa0378970 | 0.810355 | 1.201191e-50 | -8.615850e-47 |
| Msa0081940 | Msa0380600 | 0.832750 | 7.909921e-56 | -8.615850e-47 |
| Msa0081940 | Msa0382310 | 0.852748 | 3.766633e-61 | -8.615850e-47 |
| Msa0081940 | Msa0382370 | 0.837308 | 5.611905e-57 | -8.615850e-47 |
| Msa0081940 | Msa0388650 | 0.805466 | 1.316927e-49 | -8.615850e-47 |
| Msa0081940 | Msa0394690 | 0.809577 | 1.766798e-50 | -8.615850e-47 |
| Msa0081940 | Msa0395980 | 0.810678 | 1.022899e-50 | -8.615850e-47 |
| Msa0081940 | Msa0403490 | 0.842040 | 3.295173e-58 | -8.615850e-47 |
| Msa0081940 | Msa0418400 | 0.839053 | 1.993981e-57 | -8.615850e-47 |
| Msa0081940 | Msa0427580 | 0.815254 | 1.015627e-51 | -8.615850e-47 |
| Msa0081940 | Msa0430060 | 0.810004 | 1.430081e-50 | -8.615850e-47 |
| Msa0081940 | Msa0430150 | 0.805533 | 1.275309e-49 | -8.615850e-47 |
| Msa0081940 | Msa0430240 | 0.836483 | 9.113214e-57 | -8.615850e-47 |
| Msa0081940 | Msa0431210 | 0.840458 | 8.591486e-58 | -8.615850e-47 |
| Msa0081940 | Msa0432160 | 0.820674 | 6.055322e-53 | -8.615850e-47 |
| Msa0081940 | Msa0472710 | 0.852002 | 6.142064e-61 | -8.615850e-47 |
| Msa0081940 | Msa0472720 | 0.804378 | 2.223610e-49 | -8.615850e-47 |
| Msa0081940 | Msa0472770 | 0.862414 | 5.155701e-64 | -8.615850e-47 |
| Msa0081940 | Msa0476680 | 0.818382 | 2.018081e-52 | -8.615850e-47 |
| Msa0081940 | Msa0480780 | 0.803182 | 3.937831e-49 | -8.615850e-47 |
| Msa0081940 | Msa0481970 | 0.803322 | 3.684634e-49 | -8.615850e-47 |
| Msa0081940 | Msa0482940 | 0.818253 | 2.158591e-52 | -8.615850e-47 |
| Msa0081940 | Msa0491000 | 0.805509 | 1.289741e-49 | -8.615850e-47 |
| Msa0081940 | Msa0500400 | 0.808290 | 3.330659e-50 | -8.615850e-47 |
| Msa0081940 | Msa0514610 | 0.800837 | 1.194797e-48 | -8.615850e-47 |
| Msa0081940 | Msa0518170 | 0.816301 | 5.934704e-52 | -8.615850e-47 |
| Msa0081940 | Msa0520270 | 0.846865 | 1.660593e-59 | -8.615850e-47 |
| Msa0081940 | Msa0521010 | 0.817125 | 3.878943e-52 | -8.615850e-47 |
| Msa0081940 | Msa0534980 | 0.804516 | 2.081239e-49 | -8.615850e-47 |
| Msa0081940 | Msa0538160 | 0.806121 | 9.593036e-50 | -8.615850e-47 |
| Msa0081940 | Msa0544170 | 0.800534 | 1.377481e-48 | -8.615850e-47 |
| Msa0081940 | Msa0544730 | 0.824206 | 9.152178e-54 | -8.615850e-47 |
| Msa0081940 | Msa0560500 | 0.824581 | 7.471321e-54 | -8.615850e-47 |
| Msa0081940 | Msa0569780 | 0.822910 | 1.839714e-53 | -8.615850e-47 |
| Msa0081940 | Msa0572750 | 0.809410 | 1.918136e-50 | -8.615850e-47 |
| Msa0081940 | Msa0581970 | 0.804715 | 1.890905e-49 | -8.615850e-47 |
| Msa0081940 | Msa0583670 | 0.990607 | 1.916374e-183 | -8.615850e-47 |
| Msa0081940 | Msa0585070 | 0.817393 | 3.375688e-52 | -8.615850e-47 |
| Msa0081940 | Msa0597770 | 0.814216 | 1.724840e-51 | -8.615850e-47 |
| Msa0081940 | Msa0606080 | 0.801053 | 1.079550e-48 | -8.615850e-47 |
| Msa0081940 | Msa0608270 | 0.810254 | 1.262840e-50 | -8.615850e-47 |
| Msa0081940 | Msa0616450 | 0.801429 | 9.040192e-49 | -8.615850e-47 |
| Msa0081940 | Msa0640940 | 0.808077 | 3.698008e-50 | -8.615850e-47 |
| Msa0081940 | Msa0641340 | 0.816022 | 6.849061e-52 | -8.615850e-47 |
| Msa0081940 | Msa0647030 | 0.805340 | 1.399399e-49 | -8.615850e-47 |
| Msa0081940 | Msa0648830 | 0.814633 | 1.394643e-51 | -8.615850e-47 |
| Msa0081940 | Msa0652690 | 0.800932 | 1.142547e-48 | -8.615850e-47 |
| Msa0081940 | Msa0655920 | 0.810749 | 9.871638e-51 | -8.615850e-47 |
| Msa0081940 | Msa0657120 | 0.807314 | 5.369828e-50 | -8.615850e-47 |
| Msa0081940 | Msa0658680 | 0.823740 | 1.177083e-53 | -8.615850e-47 |
| Msa0081940 | Msa0659790 | 0.816335 | 5.832073e-52 | -8.615850e-47 |
| Msa0081940 | Msa0665520 | 0.800461 | 1.425670e-48 | -8.615850e-47 |
| Msa0081940 | Msa0679360 | 0.805104 | 1.567938e-49 | -8.615850e-47 |
| Msa0081940 | Msa0697720 | 0.825802 | 3.842344e-54 | -8.615850e-47 |
| Msa0081940 | Msa0698440 | 0.803245 | 3.822556e-49 | -8.615850e-47 |
| Msa0081940 | Msa0699780 | 0.804830 | 1.788968e-49 | -8.615850e-47 |
| Msa0081940 | Msa0701100 | 0.811015 | 8.648844e-51 | -8.615850e-47 |
| Msa0081940 | Msa0705390 | 0.835518 | 1.601911e-56 | -8.615850e-47 |
| Msa0081940 | Msa0709120 | 0.819954 | 8.854181e-53 | -8.615850e-47 |
| Msa0081940 | Msa0724370 | 0.830368 | 3.055396e-55 | -8.615850e-47 |
| Msa0081940 | Msa0743530 | 0.818305 | 2.100573e-52 | -8.615850e-47 |
| Msa0081940 | Msa0743870 | 0.804651 | 1.949808e-49 | -8.615850e-47 |
| Msa0081940 | Msa0748660 | 0.835828 | 1.336488e-56 | -8.615850e-47 |
| Msa0081940 | Msa0750810 | 0.801900 | 7.239844e-49 | -8.615850e-47 |
| Msa0081940 | Msa0758250 | 0.861378 | 1.070449e-63 | -8.615850e-47 |
| Msa0081940 | Msa0764920 | 0.816683 | 4.874716e-52 | -8.615850e-47 |
| Msa0081940 | Msa0775560 | 0.809428 | 1.901074e-50 | -8.615850e-47 |
| Msa0081940 | Msa0775920 | 0.800906 | 1.156849e-48 | -8.615850e-47 |
| Msa0081940 | Msa0779260 | 0.810418 | 1.163981e-50 | -8.615850e-47 |
| Msa0081940 | Msa0789560 | 0.836586 | 8.580884e-57 | -8.615850e-47 |
| Msa0081940 | Msa0799620 | 0.820516 | 6.583194e-53 | -8.615850e-47 |
| Msa0081940 | Msa0813260 | 0.824686 | 7.055574e-54 | -8.615850e-47 |
| Msa0081940 | Msa0844610 | 0.836741 | 7.834387e-57 | -8.615850e-47 |
| Msa0081940 | Msa0853810 | 0.804264 | 2.347973e-49 | -8.615850e-47 |
| Msa0081940 | Msa0865970 | 0.834214 | 3.410976e-56 | -8.615850e-47 |
| Msa0081940 | Msa0866070 | 0.833453 | 5.285859e-56 | -8.615850e-47 |
| Msa0081940 | Msa0903780 | 0.815474 | 9.077007e-52 | -8.615850e-47 |
| Msa0081940 | Msa0907850 | 0.846866 | 1.658819e-59 | -8.615850e-47 |
| Msa0081940 | Msa0945240 | 0.805239 | 1.469597e-49 | -8.615850e-47 |
| Msa0081940 | Msa0968050 | 0.802368 | 5.800004e-49 | -8.615850e-47 |
| Msa0081940 | Msa0969330 | 0.815770 | 7.797171e-52 | -8.615850e-47 |
| Msa0081940 | Msa0985220 | 0.814762 | 1.305781e-51 | -8.615850e-47 |
| Msa0081940 | Msa1030030 | 0.808465 | 3.055971e-50 | -8.615850e-47 |
| Msa0081940 | Msa1034700 | 0.839236 | 1.787580e-57 | -8.615850e-47 |
| Msa0081940 | Msa1036740 | 0.815119 | 1.088455e-51 | -8.615850e-47 |
| Msa0081940 | Msa1042660 | 0.826838 | 2.178160e-54 | -8.615850e-47 |
| Msa0081940 | Msa1054510 | 0.807413 | 5.116475e-50 | -8.615850e-47 |
| Msa0081940 | Msa1063370 | 0.806404 | 8.363910e-50 | -8.615850e-47 |
| Msa0081940 | Msa1074110 | 0.840508 | 8.334685e-58 | -8.615850e-47 |
| Msa0081940 | Msa1074350 | 0.805616 | 1.224735e-49 | -8.615850e-47 |
| Msa0081940 | Msa1074540 | 0.833426 | 5.370647e-56 | -8.615850e-47 |
| Msa0081940 | Msa1108720 | 0.819729 | 9.969330e-53 | -8.615850e-47 |
| Msa0081940 | Msa1109780 | -0.807494 | 4.919362e-50 | -8.615850e-47 |
| Msa0081940 | Msa1123350 | 0.820538 | 6.506945e-53 | -8.615850e-47 |
| Msa0081940 | Msa1127430 | 0.857918 | 1.176491e-62 | -8.615850e-47 |
| Msa0081940 | Msa1131090 | 0.809606 | 1.741120e-50 | -8.615850e-47 |
| Msa0081940 | Msa1152410 | 0.807740 | 4.361900e-50 | -8.615850e-47 |
| Msa0081940 | Msa1156820 | 0.819849 | 9.355176e-53 | -8.615850e-47 |
| Msa0081940 | Msa1163870 | 0.817283 | 3.572932e-52 | -8.615850e-47 |
| Msa0081940 | Msa1163880 | 0.808211 | 3.462640e-50 | -8.615850e-47 |
| Msa0081940 | Msa1165490 | 0.819296 | 1.251562e-52 | -8.615850e-47 |
| Msa0081940 | Msa1183140 | 0.800444 | 1.437287e-48 | -8.615850e-47 |
| Msa0081940 | Msa1184780 | 0.837096 | 6.358947e-57 | -8.615850e-47 |
| Msa0081940 | Msa1197070 | 0.804326 | 2.279765e-49 | -8.615850e-47 |
| Msa0081940 | Msa1201640 | 0.820684 | 6.021122e-53 | -8.615850e-47 |
| Msa0081940 | Msa1205590 | 0.812229 | 4.709066e-51 | -8.615850e-47 |
| Msa0081940 | Msa1206650 | 0.851208 | 1.030741e-60 | -8.615850e-47 |
| Msa0081940 | Msa1208790 | 0.801478 | 8.833912e-49 | -8.615850e-47 |
| Msa0081940 | Msa1209190 | 0.849456 | 3.196209e-60 | -8.615850e-47 |
| Msa0081940 | Msa1209860 | 0.820751 | 5.814078e-53 | -8.615850e-47 |
| Msa0081940 | Msa1214320 | 0.811183 | 7.951964e-51 | -8.615850e-47 |
| Msa0081940 | Msa1234620 | 0.824282 | 8.782533e-54 | -8.615850e-47 |
| Msa0081940 | Msa1254620 | 0.842464 | 2.545703e-58 | -8.615850e-47 |
| Msa0081940 | Msa1257070 | 0.826874 | 2.134894e-54 | -8.615850e-47 |
| Msa0081940 | Msa1260680 | 0.821169 | 4.656826e-53 | -8.615850e-47 |
| Msa0081940 | Msa1261850 | 0.806608 | 7.572986e-50 | -8.615850e-47 |
| Msa0081940 | Msa1266330 | 0.820036 | 8.477617e-53 | -8.615850e-47 |
| Msa0081940 | Msa1270660 | 0.817352 | 3.448442e-52 | -8.615850e-47 |
| Msa0081940 | Msa1274510 | 0.803553 | 3.300370e-49 | -8.615850e-47 |
| Msa0081940 | Msa1280170 | 0.825957 | 3.531269e-54 | -8.615850e-47 |
| Msa0081940 | Msa1285200 | 0.807207 | 5.656828e-50 | -8.615850e-47 |
| Msa0081940 | Msa1297530 | 0.802675 | 5.013445e-49 | -8.615850e-47 |
| Msa0081940 | Msa1298100 | 0.876528 | 1.299719e-68 | -8.615850e-47 |
| Msa0081940 | Msa1304810 | 0.827510 | 1.503388e-54 | -8.615850e-47 |
| Msa0081940 | Msa1307180 | 0.807745 | 4.350673e-50 | -8.615850e-47 |
| Msa0081940 | Msa1330550 | 0.812414 | 4.291894e-51 | -8.615850e-47 |
| Msa0081940 | Msa1332050 | 0.812160 | 4.875965e-51 | -8.615850e-47 |
| Msa0081940 | Msa1334400 | 0.806652 | 7.415058e-50 | -8.615850e-47 |
| Msa0081940 | Msa1336040 | 0.844993 | 5.359009e-59 | -8.615850e-47 |
| Msa0081940 | Msa1366550 | 0.842934 | 1.909152e-58 | -8.615850e-47 |
| Msa0081940 | Msa1369690 | 0.802590 | 5.218469e-49 | -8.615850e-47 |
| Msa0081940 | Msa1370590 | 0.819288 | 1.256703e-52 | -8.615850e-47 |
| Msa0081940 | Msa1382020 | 0.823258 | 1.525615e-53 | -8.615850e-47 |
| Msa0081940 | Msa1384100 | 0.819644 | 1.042198e-52 | -8.615850e-47 |
| Msa0081940 | Msa1391720 | 0.801990 | 6.937873e-49 | -8.615850e-47 |
| Msa0081940 | Msa1411980 | 0.823590 | 1.276218e-53 | -8.615850e-47 |
| Msa0081940 | Msa1412110 | 0.805676 | 1.189830e-49 | -8.615850e-47 |
| Msa0081940 | Msa1416260 | 0.810547 | 1.091796e-50 | -8.615850e-47 |
| Msa0081940 | Msa1421900 | 0.872567 | 2.880048e-67 | -8.615850e-47 |
| Msa0081940 | Msa1426910 | 0.815961 | 7.066990e-52 | -8.615850e-47 |
| Msa0081940 | Msa1428780 | 0.806984 | 6.306519e-50 | -8.615850e-47 |
| Msa0081940 | Msa1434040 | 0.817630 | 2.985465e-52 | -8.615850e-47 |
| Msa0081940 | Msa1444120 | 0.824246 | 8.954788e-54 | -8.615850e-47 |
| Msa0081940 | Msa1450720 | 0.828050 | 1.115215e-54 | -8.615850e-47 |
| Msa0081940 | Msa1454960 | 0.801498 | 8.751584e-49 | -8.615850e-47 |
| Msa0081940 | Msa1462470 | 0.817920 | 2.567534e-52 | -8.615850e-47 |
| Msa0081940 | Msa1463030 | 0.841530 | 4.492884e-58 | -8.615850e-47 |
| Msa0081940 | Msa1463600 | 0.804889 | 1.738981e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081940 | MtrunA17_Chr1g0194901 | 93.438 | 701 | 20 | 2 | 1 | 677 | 1 | 699 | 0.0 | 1340 |
| Msa0081940 | MtrunA17_Chr7g0269851 | 60.296 | 675 | 193 | 12 | 30 | 662 | 39 | 680 | 0.0 | 735 |
| Msa0081940 | MtrunA17_Chr7g0275571 | 47.977 | 519 | 234 | 9 | 108 | 603 | 162 | 667 | 5.44e-147 | 443 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081940 | AT1G02660.1 | 55.769 | 728 | 256 | 13 | 1 | 677 | 1 | 713 | 0.0 | 726 |
| Msa0081940 | AT3G62590.1 | 50.141 | 708 | 248 | 15 | 1 | 674 | 1 | 637 | 0.0 | 584 |
| Msa0081940 | AT3G61680.2 | 51.277 | 470 | 203 | 3 | 134 | 599 | 178 | 625 | 5.80e-146 | 439 |
| Msa0081940 | AT3G61680.1 | 51.277 | 470 | 203 | 3 | 134 | 599 | 178 | 625 | 5.80e-146 | 439 |
| Msa0081940 | AT3G61680.3 | 51.277 | 470 | 203 | 3 | 134 | 599 | 178 | 625 | 5.80e-146 | 439 |
Find 153 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATTACCTTGATATT+TGG | 0.154361 | 1_2:-60694537 | None:intergenic |
| AGAAACCCTCCTTAGCATTT+TGG | 0.155210 | 1_2:-60694454 | None:intergenic |
| ATCCTATATCCACCATTATT+TGG | 0.160237 | 1_2:-60695441 | None:intergenic |
| GCAATTACCTCAAATTTAAT+TGG | 0.213954 | 1_2:-60695928 | None:intergenic |
| CCCTGCTAGGATGTTAATAT+TGG | 0.229996 | 1_2:+60697158 | Msa0081940:CDS |
| TACGGATCTGGTTAAGTTCT+TGG | 0.252856 | 1_2:-60696918 | None:intergenic |
| GTCTCTCGACGACGCCGTTT+TGG | 0.268578 | 1_2:+60694180 | Msa0081940:CDS |
| AATGCTAAGGAGGGTTTCTT+TGG | 0.270200 | 1_2:+60694458 | Msa0081940:CDS |
| GATGTCACACTTGGGGAGTT+TGG | 0.270494 | 1_2:+60694503 | Msa0081940:CDS |
| CCTGCTAGGATGTTAATATT+GGG | 0.281713 | 1_2:+60697159 | Msa0081940:CDS |
| CTACTTCCTGTGATAACATT+TGG | 0.282356 | 1_2:+60696270 | Msa0081940:CDS |
| TGCCTTGCGGCAGAAGATTA+TGG | 0.283373 | 1_2:-60696696 | None:intergenic |
| CAGGAAGAGAGTCCTTAAAA+AGG | 0.312198 | 1_2:+60697082 | Msa0081940:CDS |
| TCCACCATTATTTGGCTCCT+TGG | 0.317715 | 1_2:-60695433 | None:intergenic |
| TTTAGGTGAGCATGAACTTC+TGG | 0.322356 | 1_2:-60696135 | None:intergenic |
| TTAAGTGACCGATCTGCTTA+TGG | 0.329267 | 1_2:+60696826 | Msa0081940:CDS |
| CATTTCATATCATTCATCTA+AGG | 0.331288 | 1_2:-60697200 | None:intergenic |
| CTTGGTGAAAATTTCTCATC+TGG | 0.344080 | 1_2:-60696673 | None:intergenic |
| CTTGATATTTGGTATAGAAT+AGG | 0.352328 | 1_2:-60694526 | None:intergenic |
| GATACCCATTGGAATCTCTA+TGG | 0.358600 | 1_2:+60694125 | Msa0081940:CDS |
| CATGTCATGATCTCTTTGTA+TGG | 0.368198 | 1_2:-60696860 | None:intergenic |
| AGCTTCTTGTCCGTGTCATT+AGG | 0.369839 | 1_2:-60696754 | None:intergenic |
| CTCGCATCGATTTACGGATC+TGG | 0.403958 | 1_2:-60696930 | None:intergenic |
| CGCAGAAGTGGCATCTTTGA+TGG | 0.405975 | 1_2:+60695599 | Msa0081940:CDS |
| CGTGCAACTTTCCGTTTCAC+TGG | 0.411226 | 1_2:+60696171 | Msa0081940:CDS |
| CGTTTCACTGGACATTCCCT+TGG | 0.413018 | 1_2:+60696183 | Msa0081940:CDS |
| CAACGCCAGTCACCGTTCTC+TGG | 0.414357 | 1_2:+60697048 | Msa0081940:CDS |
| GACCGATCTGCTTATGGATC+TGG | 0.419315 | 1_2:+60696832 | Msa0081940:CDS |
| CCCAATATTAACATCCTAGC+AGG | 0.442858 | 1_2:-60697159 | None:intergenic |
| TTGATACCAGCATTGTTGTT+GGG | 0.446372 | 1_2:+60696998 | Msa0081940:CDS |
| TTCACGACCCACCGCACTTA+CGG | 0.447728 | 1_2:-60694062 | None:intergenic |
| ACATTCCCTTGGTGGAAGCT+TGG | 0.448070 | 1_2:+60696194 | Msa0081940:CDS |
| GACAGCAGTGGTTGCGGCAA+AGG | 0.448188 | 1_2:+60695638 | Msa0081940:CDS |
| ATTGTTCCTTCGATCTCCAT+TGG | 0.450078 | 1_2:+60693998 | Msa0081940:CDS |
| TTCACTGGACATTCCCTTGG+TGG | 0.452430 | 1_2:+60696186 | Msa0081940:CDS |
| GAAACCAAGGAGCCAAATAA+TGG | 0.453919 | 1_2:+60695429 | Msa0081940:CDS |
| GGGAAACTCTTAAAACATTA+CGG | 0.455788 | 1_2:+60695312 | Msa0081940:CDS |
| GTTCGGAGTCATTAGCATCT+TGG | 0.455806 | 1_2:+60695884 | Msa0081940:CDS |
| GTTCAAGAACGTCAACTTTG+CGG | 0.456069 | 1_2:-60696782 | None:intergenic |
| CCTGCACGTGGCTTCGCGGC+AGG | 0.457427 | 1_2:-60696341 | None:intergenic |
| CACATGGTTAGCTGAATGTT+AGG | 0.465272 | 1_2:+60697270 | Msa0081940:three_prime_UTR |
| TTCTCTGTTATCTTCCAAAA+CGG | 0.471419 | 1_2:-60694194 | None:intergenic |
| AAGAATATTCCTCTACAAGC+AGG | 0.475927 | 1_2:-60697342 | None:intergenic |
| GTTCCTTCGATCTCCATTGG+TGG | 0.483103 | 1_2:+60694001 | Msa0081940:CDS |
| ACACAAATAAATGCATGTGT+TGG | 0.484143 | 1_2:-60697125 | None:intergenic |
| CGCATCTACCGTAAGTGCGG+TGG | 0.485121 | 1_2:+60694054 | Msa0081940:CDS |
| TGTTGGGAGGTCCATGGTAT+CGG | 0.485167 | 1_2:+60697014 | Msa0081940:CDS |
| ACTTCTTCAAATGCAGCGGC+TGG | 0.497103 | 1_2:+60695543 | Msa0081940:CDS |
| AGCCAAATAATGGTGGATAT+AGG | 0.497389 | 1_2:+60695439 | Msa0081940:CDS |
| CTTAATATCTCAAGTGGATG+AGG | 0.501462 | 1_2:-60696808 | None:intergenic |
| GTTGATACCAGCATTGTTGT+TGG | 0.504284 | 1_2:+60696997 | Msa0081940:CDS |
| ATTGCCTGCACGTGGCTTCG+CGG | 0.504752 | 1_2:-60696345 | None:intergenic |
| CCTGCCGCGAAGCCACGTGC+AGG | 0.508181 | 1_2:+60696341 | Msa0081940:CDS |
| GTATATATGAGGCTGCTAAA+GGG | 0.510063 | 1_2:+60696094 | Msa0081940:CDS |
| CACAAATAAATGCATGTGTT+GGG | 0.510490 | 1_2:-60697124 | None:intergenic |
| TTCAGTGACAGCAGTGGTTG+CGG | 0.512338 | 1_2:+60695632 | Msa0081940:CDS |
| CTCGTTCGTCACCTTGCGAA+TGG | 0.517823 | 1_2:+60695700 | Msa0081940:CDS |
| GGTATATATGAGGCTGCTAA+AGG | 0.517913 | 1_2:+60696093 | Msa0081940:CDS |
| CATTGTTGTTGGGAGGTCCA+TGG | 0.518484 | 1_2:+60697008 | Msa0081940:CDS |
| CAAGGGAATGTCCAGTGAAA+CGG | 0.522758 | 1_2:-60696182 | None:intergenic |
| CTATTCTATACCAAATATCA+AGG | 0.525327 | 1_2:+60694527 | Msa0081940:CDS |
| AATGTTTGGAAAGGGGAACA+AGG | 0.528089 | 1_2:+60694294 | Msa0081940:intron |
| AAAATCTGAGAAAATTCCTC+AGG | 0.530787 | 1_2:+60695380 | Msa0081940:CDS |
| AATCTTCTGCCGCAAGGCAG+TGG | 0.532114 | 1_2:+60696700 | Msa0081940:CDS |
| AAGCTACTATACACACCAAT+GGG | 0.534284 | 1_2:+60696631 | Msa0081940:CDS |
| CTCCTCACCGTCATCTCTAA+CGG | 0.535095 | 1_2:-60694230 | None:intergenic |
| CATATATACCTCTGTGCACA+AGG | 0.536219 | 1_2:-60696080 | None:intergenic |
| TTATGCCAGAGAACGGTGAC+TGG | 0.536435 | 1_2:-60697053 | None:intergenic |
| TCAAATGCAGCGGCTGGTGA+AGG | 0.538184 | 1_2:+60695549 | Msa0081940:CDS |
| CTTCTGCGTTCATCATGTCA+AGG | 0.540763 | 1_2:-60695584 | None:intergenic |
| TTCTCTGGCATAATGAAGAC+AGG | 0.544083 | 1_2:+60697063 | Msa0081940:CDS |
| AGAACGTCAACTTTGCGGCT+CGG | 0.546820 | 1_2:-60696777 | None:intergenic |
| AGAATCAGCAATTCACCCAT+TGG | 0.548209 | 1_2:-60696646 | None:intergenic |
| CTGCTAGGATGTTAATATTG+GGG | 0.549191 | 1_2:+60697160 | Msa0081940:CDS |
| GGTTCCCCTTCCATCATGTG+TGG | 0.551578 | 1_2:+60696291 | Msa0081940:CDS |
| CGCCTCCACACATGATGGAA+GGG | 0.552230 | 1_2:-60696296 | None:intergenic |
| TGCGGCAGAAGATTATGGCT+TGG | 0.555573 | 1_2:-60696691 | None:intergenic |
| CGGTCACTTAATATCTCAAG+TGG | 0.555750 | 1_2:-60696814 | None:intergenic |
| CTCACCGTCATCTCTAACGG+TGG | 0.557455 | 1_2:-60694227 | None:intergenic |
| AGCAGTGGTTGCGGCAAAGG+AGG | 0.558429 | 1_2:+60695641 | Msa0081940:CDS |
| GGCAAAGGAGGAAGTAAAGC+AGG | 0.560431 | 1_2:+60695653 | Msa0081940:CDS |
| GGACCTCCCAACAACAATGC+TGG | 0.562296 | 1_2:-60697004 | None:intergenic |
| GCTGCATTTGAAGAAGTGAA+TGG | 0.563038 | 1_2:-60695537 | None:intergenic |
| ATACCAGCATTGTTGTTGGG+AGG | 0.566961 | 1_2:+60697001 | Msa0081940:CDS |
| GTATGCTCAGATGTCACACT+TGG | 0.567630 | 1_2:+60694494 | Msa0081940:CDS |
| CAGAGAACGGTGACTGGCGT+TGG | 0.568268 | 1_2:-60697047 | None:intergenic |
| TGACATGATGAACGCAGAAG+TGG | 0.568983 | 1_2:+60695587 | Msa0081940:CDS |
| CTCAAGAACCCTGCTTGTAG+AGG | 0.569073 | 1_2:+60697333 | Msa0081940:three_prime_UTR |
| CGATCTGCTTATGGATCTGG+AGG | 0.572142 | 1_2:+60696835 | Msa0081940:CDS |
| TTTACTTGGTTATTGAGACA+TGG | 0.572898 | 1_2:-60696468 | None:intergenic |
| TTACTTGGTTATTGAGACAT+GGG | 0.574179 | 1_2:-60696467 | None:intergenic |
| TCTTTACTTTCGACTTCCTG+AGG | 0.574252 | 1_2:-60695396 | None:intergenic |
| CAAGGGAATCATGAAAGAGA+AGG | 0.574584 | 1_2:+60694312 | Msa0081940:CDS |
| CGACGGAACAGAACGTTCAG+TGG | 0.580188 | 1_2:+60694154 | Msa0081940:CDS |
| AGAGAAGCAAGAAGAAACCA+AGG | 0.581266 | 1_2:+60695416 | Msa0081940:CDS |
| TCGCCTCCACACATGATGGA+AGG | 0.582366 | 1_2:-60696297 | None:intergenic |
| TCCATGGTATCGGTCAGTAT+CGG | 0.583827 | 1_2:+60697024 | Msa0081940:CDS |
| GGGGAACCAAATGTTATCAC+AGG | 0.584190 | 1_2:-60696276 | None:intergenic |
| GCCGATACTGACCGATACCA+TGG | 0.588719 | 1_2:-60697025 | None:intergenic |
| GAGAGAAAAGACGCAAGGTA+TGG | 0.588772 | 1_2:+60696950 | Msa0081940:CDS |
| GTGTATAAAACAAGGGCACA+TGG | 0.588841 | 1_2:+60697254 | Msa0081940:three_prime_UTR |
| GCATTATAATTGCCTGCACG+TGG | 0.590797 | 1_2:-60696353 | None:intergenic |
| GAAGCTACTATACACACCAA+TGG | 0.592530 | 1_2:+60696630 | Msa0081940:intron |
| TAGTGCCAAGCTTCCACCAA+GGG | 0.594028 | 1_2:-60696199 | None:intergenic |
| TGTGCACAGAGGTATATATG+AGG | 0.594337 | 1_2:+60696083 | Msa0081940:CDS |
| GACACTCTACTTGAAAAGCT+TGG | 0.594758 | 1_2:+60696318 | Msa0081940:CDS |
| CTCCAGATCCATAAGCAGAT+CGG | 0.594796 | 1_2:-60696834 | None:intergenic |
| AGCCATAATCTTCTGCCGCA+AGG | 0.595034 | 1_2:+60696694 | Msa0081940:CDS |
| AACGTTCTGTTCCGTCGTTG+TGG | 0.595293 | 1_2:-60694148 | None:intergenic |
| ATGTTTGGAAAGGGGAACAA+GGG | 0.596462 | 1_2:+60694295 | Msa0081940:intron |
| TATGCTCAGATGTCACACTT+GGG | 0.597591 | 1_2:+60694495 | Msa0081940:CDS |
| ACAGGAAGTAGAGAGGTGAT+TGG | 0.597627 | 1_2:-60696258 | None:intergenic |
| AGTGTCGCCTCCACACATGA+TGG | 0.598823 | 1_2:-60696301 | None:intergenic |
| AGAAAAGACGCAAGGTATGG+TGG | 0.599163 | 1_2:+60696953 | Msa0081940:CDS |
| GCCTCCACACATGATGGAAG+GGG | 0.599219 | 1_2:-60696295 | None:intergenic |
| GTGGCCATAGAGATTCCAAT+GGG | 0.600305 | 1_2:-60694129 | None:intergenic |
| TCCCCTTCCATCATGTGTGG+AGG | 0.601542 | 1_2:+60696294 | Msa0081940:CDS |
| GTCTTCATTATGCCAGAGAA+CGG | 0.604223 | 1_2:-60697060 | None:intergenic |
| CGCACTTACGGTAGATGCGG+TGG | 0.605825 | 1_2:-60694050 | None:intergenic |
| TGCTAGGATGTTAATATTGG+GGG | 0.605936 | 1_2:+60697161 | Msa0081940:CDS |
| ACCAAGGAGCCAAATAATGG+TGG | 0.606415 | 1_2:+60695432 | Msa0081940:CDS |
| ATTCACTTCTTCAAATGCAG+CGG | 0.610395 | 1_2:+60695539 | Msa0081940:CDS |
| GCATCTACCGTAAGTGCGGT+GGG | 0.614606 | 1_2:+60694055 | Msa0081940:CDS |
| GTGCAGATAAGATGCAGCAG+AGG | 0.621656 | 1_2:-60695493 | None:intergenic |
| AAAACCACCGTTAGAGATGA+CGG | 0.627979 | 1_2:+60694223 | Msa0081940:CDS |
| GATCCACCAATGGAGATCGA+AGG | 0.628096 | 1_2:-60694004 | None:intergenic |
| ACTCGTCGCGGTAGTACAAG+AGG | 0.630459 | 1_2:-60696976 | None:intergenic |
| AATCTCTATGGCCACAACGA+CGG | 0.633455 | 1_2:+60694137 | Msa0081940:CDS |
| TGTGGCCATAGAGATTCCAA+TGG | 0.646166 | 1_2:-60694130 | None:intergenic |
| AGGGAAAAGTGTATAAAACA+AGG | 0.646888 | 1_2:+60697246 | Msa0081940:three_prime_UTR |
| TCGCAGATGAACCATTCGCA+AGG | 0.648265 | 1_2:-60695711 | None:intergenic |
| CACCGCATCTACCGTAAGTG+CGG | 0.649836 | 1_2:+60694051 | Msa0081940:CDS |
| TGTATCTAAAGATCCACCAA+TGG | 0.652056 | 1_2:-60694014 | None:intergenic |
| ATGCTCAGATGTCACACTTG+GGG | 0.652908 | 1_2:+60694496 | Msa0081940:CDS |
| AGAATATTCCTCTACAAGCA+GGG | 0.654837 | 1_2:-60697341 | None:intergenic |
| TGGATATAGGATAAGTGCAA+CGG | 0.659737 | 1_2:+60695452 | Msa0081940:CDS |
| CACCGCACTTACGGTAGATG+CGG | 0.662356 | 1_2:-60694053 | None:intergenic |
| TTGGATGTCCTTGTGCACAG+AGG | 0.663273 | 1_2:+60696072 | Msa0081940:CDS |
| AGATATAGACCACTGCCTTG+CGG | 0.663361 | 1_2:-60696709 | None:intergenic |
| CCAATATTAACATCCTAGCA+GGG | 0.667471 | 1_2:-60697158 | None:intergenic |
| GTGTCATTAGGTTCTGACAA+AGG | 0.671563 | 1_2:-60696742 | None:intergenic |
| CATGCTCACCTAAAATCTCG+AGG | 0.672833 | 1_2:+60696144 | Msa0081940:CDS |
| TACTGATTCAGTGACAGCAG+TGG | 0.675088 | 1_2:+60695626 | Msa0081940:CDS |
| GATGCGAGAGAAAAGACGCA+AGG | 0.678863 | 1_2:+60696945 | Msa0081940:CDS |
| TGTTATCACAGGAAGTAGAG+AGG | 0.682469 | 1_2:-60696265 | None:intergenic |
| TTTGTCAGAACCTAATGACA+CGG | 0.688799 | 1_2:+60696744 | Msa0081940:CDS |
| GGGAAAAGTGTATAAAACAA+GGG | 0.692115 | 1_2:+60697247 | Msa0081940:three_prime_UTR |
| GTAGTGCCAAGCTTCCACCA+AGG | 0.715098 | 1_2:-60696200 | None:intergenic |
| TCAAGTTTGTGATACTTGCG+CGG | 0.721242 | 1_2:+60694374 | Msa0081940:CDS |
| ATCTGCGATGATAACCAGAG+TGG | 0.733794 | 1_2:+60695726 | Msa0081940:CDS |
| TAATTGCAAGAAAATGCTCG+CGG | 0.749108 | 1_2:-60696390 | None:intergenic |
| ATGCTGGTATCAACTCGTCG+CGG | 0.755961 | 1_2:-60696988 | None:intergenic |
| GCTGAGAATGATGAAAACAA+CGG | 0.787436 | 1_2:+60694342 | Msa0081940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAATTTTGGATCATT+CGG | + | chr1_2:60694604-60694623 | Msa0081940:intron | 15.0% |
| !! | TAAAATTAAAAGACAAACTT+TGG | - | chr1_2:60694819-60694838 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATAAACTTTT+TGG | - | chr1_2:60696513-60696532 | None:intergenic | 15.0% |
| !!! | TATGTTTTTTCTTTATTGAT+AGG | + | chr1_2:60696520-60696539 | Msa0081940:intron | 15.0% |
| !!! | ATTCATATTTTTTATTACGA+GGG | + | chr1_2:60697223-60697242 | Msa0081940:three_prime_UTR | 15.0% |
| !! | AAACTATGTGTTTAAAAACT+GGG | + | chr1_2:60693975-60693994 | Msa0081940:CDS | 20.0% |
| !! | AAACAAATTACCTTGATATT+TGG | - | chr1_2:60694540-60694559 | None:intergenic | 20.0% |
| !!! | GCTTTATGGTTTTTAAATTT+TGG | + | chr1_2:60694595-60694614 | Msa0081940:intron | 20.0% |
| !!! | TATTTTGTTTTTATGTGATC+TGG | + | chr1_2:60694710-60694729 | Msa0081940:intron | 20.0% |
| !!! | TTTGTCTTTTAATTTTAGCA+TGG | + | chr1_2:60694822-60694841 | Msa0081940:intron | 20.0% |
| !!! | TACAAGATTTTTTGTTATTC+AGG | + | chr1_2:60695749-60695768 | Msa0081940:CDS | 20.0% |
| !!! | GATTCATATTTTTTATTACG+AGG | + | chr1_2:60697222-60697241 | Msa0081940:three_prime_UTR | 20.0% |
| ! | GAAACTATGTGTTTAAAAAC+TGG | + | chr1_2:60693974-60693993 | Msa0081940:CDS | 25.0% |
| !! | GAAAACAATGATTTTTGTGA+AGG | - | chr1_2:60694091-60694110 | None:intergenic | 25.0% |
| !! | ATTTTCATTTAGATACCCAT+TGG | + | chr1_2:60694114-60694133 | Msa0081940:CDS | 25.0% |
| ! | CTTGATATTTGGTATAGAAT+AGG | - | chr1_2:60694529-60694548 | None:intergenic | 25.0% |
| ! | CTATTCTATACCAAATATCA+AGG | + | chr1_2:60694527-60694546 | Msa0081940:CDS | 25.0% |
| !!! | TTGTTTTTACTTGTGCTTTA+TGG | + | chr1_2:60694581-60694600 | Msa0081940:intron | 25.0% |
| !!! | TTTTAGTTGATTCTTAGAGA+TGG | + | chr1_2:60694643-60694662 | Msa0081940:intron | 25.0% |
| ! | GTTTGTAAATTGTTCATTCA+TGG | + | chr1_2:60694669-60694688 | Msa0081940:intron | 25.0% |
| ! | ATCTTCAACTAATCAATGTT+TGG | - | chr1_2:60694746-60694765 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAACAAATCA+AGG | - | chr1_2:60694770-60694789 | None:intergenic | 25.0% |
| !!! | TGATTTGTTTCTTTCTTTCT+TGG | + | chr1_2:60694770-60694789 | Msa0081940:intron | 25.0% |
| !!! | TATGGATTGGTGTATTTATA+AGG | + | chr1_2:60694933-60694952 | Msa0081940:intron | 25.0% |
| !! | CTATAATCTGAATCTTTTGT+TGG | + | chr1_2:60695010-60695029 | Msa0081940:intron | 25.0% |
| !!! | AGTGTGATTTTTTACAACTA+TGG | + | chr1_2:60695114-60695133 | Msa0081940:intron | 25.0% |
| ! | TGGAAATCAGAACATATAAT+AGG | - | chr1_2:60695242-60695261 | None:intergenic | 25.0% |
| !! | TTAGTTTCATATGCATTTTG+TGG | - | chr1_2:60695262-60695281 | None:intergenic | 25.0% |
| ! | TGAAATTTGATTATTTAGCC+AGG | + | chr1_2:60695291-60695310 | Msa0081940:intron | 25.0% |
| ! | GAAATTTGATTATTTAGCCA+GGG | + | chr1_2:60695292-60695311 | Msa0081940:intron | 25.0% |
| !!! | AGATTTTTTGTTATTCAGGT+AGG | + | chr1_2:60695753-60695772 | Msa0081940:intron | 25.0% |
| !!! | GATTTTTTGTTATTCAGGTA+GGG | + | chr1_2:60695754-60695773 | Msa0081940:intron | 25.0% |
| !!! | ATTTTTTGTTATTCAGGTAG+GGG | + | chr1_2:60695755-60695774 | Msa0081940:intron | 25.0% |
| !! | TTGATAAAGCGTTATTATGT+AGG | + | chr1_2:60695861-60695880 | Msa0081940:intron | 25.0% |
| !! | TGATAAAGCGTTATTATGTA+GGG | + | chr1_2:60695862-60695881 | Msa0081940:intron | 25.0% |
| !! | ATTTAATTGGCTCAAAAAGT+AGG | - | chr1_2:60695918-60695937 | None:intergenic | 25.0% |
| !! | TTTTGAGCCAATTAAATTTG+AGG | + | chr1_2:60695921-60695940 | Msa0081940:CDS | 25.0% |
| ! | GCAATTACCTCAAATTTAAT+TGG | - | chr1_2:60695931-60695950 | None:intergenic | 25.0% |
| ! | CATTTCATATCATTCATCTA+AGG | - | chr1_2:60697203-60697222 | None:intergenic | 25.0% |
| !!! | ATATTTTTTATTACGAGGGA+GGG | + | chr1_2:60697227-60697246 | Msa0081940:three_prime_UTR | 25.0% |
| TTCTCTGTTATCTTCCAAAA+CGG | - | chr1_2:60694197-60694216 | None:intergenic | 30.0% | |
| ! | TTTTGCATGTGAAGAATGTT+TGG | + | chr1_2:60694280-60694299 | Msa0081940:intron | 30.0% |
| ATGTGAAGAATGTTTGGAAA+GGG | + | chr1_2:60694286-60694305 | Msa0081940:intron | 30.0% | |
| ! | ACTCATTTTCCAAAATGCTA+AGG | + | chr1_2:60694445-60694464 | Msa0081940:CDS | 30.0% |
| ! | ATTTTCCAAAATGCTAAGGA+GGG | + | chr1_2:60694449-60694468 | Msa0081940:CDS | 30.0% |
| ! | TTGTTCATTCATGGTTTTTG+AGG | + | chr1_2:60694678-60694697 | Msa0081940:intron | 30.0% |
| ATTTACCATGTGTTGGATTA+TGG | + | chr1_2:60694915-60694934 | Msa0081940:intron | 30.0% | |
| !!! | AAGGTTTTAATTCATAACCC+TGG | + | chr1_2:60694952-60694971 | Msa0081940:intron | 30.0% |
| !!! | AGGTTTTAATTCATAACCCT+GGG | + | chr1_2:60694953-60694972 | Msa0081940:intron | 30.0% |
| TATGTTAGGTGATTGATCTT+TGG | + | chr1_2:60695150-60695169 | Msa0081940:intron | 30.0% | |
| ! | GCATTTTTGCGATTGAAATT+TGG | + | chr1_2:60695187-60695206 | Msa0081940:intron | 30.0% |
| !!! | TAATGTTTTAAGAGTTTCCC+TGG | - | chr1_2:60695312-60695331 | None:intergenic | 30.0% |
| GGGAAACTCTTAAAACATTA+CGG | + | chr1_2:60695312-60695331 | Msa0081940:CDS | 30.0% | |
| ATCGCTAGAGAAAAAAGAAT+TGG | + | chr1_2:60695353-60695372 | Msa0081940:CDS | 30.0% | |
| AAAATCTGAGAAAATTCCTC+AGG | + | chr1_2:60695380-60695399 | Msa0081940:CDS | 30.0% | |
| ATCCTATATCCACCATTATT+TGG | - | chr1_2:60695444-60695463 | None:intergenic | 30.0% | |
| !!! | TGTACACATTTTTTTTACCC+AGG | + | chr1_2:60696047-60696066 | Msa0081940:intron | 30.0% |
| !!! | GTACACATTTTTTTTACCCA+GGG | + | chr1_2:60696048-60696067 | Msa0081940:intron | 30.0% |
| !!! | CCTTTAAGATTTTTGCAACA+TGG | - | chr1_2:60696422-60696441 | None:intergenic | 30.0% |
| CCATGTTGCAAAAATCTTAA+AGG | + | chr1_2:60696419-60696438 | Msa0081940:CDS | 30.0% | |
| TTACTTGGTTATTGAGACAT+GGG | - | chr1_2:60696470-60696489 | None:intergenic | 30.0% | |
| TTTACTTGGTTATTGAGACA+TGG | - | chr1_2:60696471-60696490 | None:intergenic | 30.0% | |
| ! | CATAAACTTTTTGGATAAGC+AGG | - | chr1_2:60696504-60696523 | None:intergenic | 30.0% |
| CACAAATAAATGCATGTGTT+GGG | - | chr1_2:60697127-60697146 | None:intergenic | 30.0% | |
| ACACAAATAAATGCATGTGT+TGG | - | chr1_2:60697128-60697147 | None:intergenic | 30.0% | |
| !!! | CATATTTTTTATTACGAGGG+AGG | + | chr1_2:60697226-60697245 | Msa0081940:three_prime_UTR | 30.0% |
| ! | AGGGAAAAGTGTATAAAACA+AGG | + | chr1_2:60697246-60697265 | Msa0081940:three_prime_UTR | 30.0% |
| ! | GGGAAAAGTGTATAAAACAA+GGG | + | chr1_2:60697247-60697266 | Msa0081940:three_prime_UTR | 30.0% |
| TGTATCTAAAGATCCACCAA+TGG | - | chr1_2:60694017-60694036 | None:intergenic | 35.0% | |
| CATGTGAAGAATGTTTGGAA+AGG | + | chr1_2:60694285-60694304 | Msa0081940:intron | 35.0% | |
| TGTGAAGAATGTTTGGAAAG+GGG | + | chr1_2:60694287-60694306 | Msa0081940:intron | 35.0% | |
| GCTGAGAATGATGAAAACAA+CGG | + | chr1_2:60694342-60694361 | Msa0081940:CDS | 35.0% | |
| ! | CATTTTCCAAAATGCTAAGG+AGG | + | chr1_2:60694448-60694467 | Msa0081940:CDS | 35.0% |
| ! | TCTTTCTTTCTTGGCTTGAA+TGG | + | chr1_2:60694779-60694798 | Msa0081940:intron | 35.0% |
| ! | CTTTCTTTCTTGGCTTGAAT+GGG | + | chr1_2:60694780-60694799 | Msa0081940:intron | 35.0% |
| ! | TTTCTTTCTTGGCTTGAATG+GGG | + | chr1_2:60694781-60694800 | Msa0081940:intron | 35.0% |
| ! | GCATTTTGCCGTTATATCAA+AGG | + | chr1_2:60694878-60694897 | Msa0081940:intron | 35.0% |
| ACCGCAAACCTTTGATATAA+CGG | - | chr1_2:60694889-60694908 | None:intergenic | 35.0% | |
| TTTAATTCATAACCCTGGGT+AGG | + | chr1_2:60694957-60694976 | Msa0081940:intron | 35.0% | |
| TTAATTCATAACCCTGGGTA+GGG | + | chr1_2:60694958-60694977 | Msa0081940:intron | 35.0% | |
| CTTAAACTTGTCGAGACAAT+GGG | + | chr1_2:60694986-60695005 | Msa0081940:intron | 35.0% | |
| TTAAACTTGTCGAGACAATG+GGG | + | chr1_2:60694987-60695006 | Msa0081940:intron | 35.0% | |
| ! | GTTTTATCCAAAGCTAAACG+AGG | - | chr1_2:60695074-60695093 | None:intergenic | 35.0% |
| GAATGCTCATTGCTTATGTT+AGG | + | chr1_2:60695136-60695155 | Msa0081940:intron | 35.0% | |
| !! | AGCCAAATAATGGTGGATAT+AGG | + | chr1_2:60695439-60695458 | Msa0081940:CDS | 35.0% |
| TGGATATAGGATAAGTGCAA+CGG | + | chr1_2:60695452-60695471 | Msa0081940:CDS | 35.0% | |
| ATTCACTTCTTCAAATGCAG+CGG | + | chr1_2:60695539-60695558 | Msa0081940:CDS | 35.0% | |
| CAAAAAATCTTGTACCACTC+TGG | - | chr1_2:60695743-60695762 | None:intergenic | 35.0% | |
| AAGCGTTATTATGTAGGGTT+CGG | + | chr1_2:60695867-60695886 | Msa0081940:intron | 35.0% | |
| TTGCTGATATTGCAGACTAT+AGG | + | chr1_2:60695947-60695966 | Msa0081940:intron | 35.0% | |
| ! | TTTTTCGTCACTATTGTCGA+AGG | + | chr1_2:60695971-60695990 | Msa0081940:intron | 35.0% |
| ! | TTTTCGTCACTATTGTCGAA+GGG | + | chr1_2:60695972-60695991 | Msa0081940:intron | 35.0% |
| !!! | CATTTTTTTTACCCAGGGTT+TGG | + | chr1_2:60696053-60696072 | Msa0081940:intron | 35.0% |
| GTATATATGAGGCTGCTAAA+GGG | + | chr1_2:60696094-60696113 | Msa0081940:CDS | 35.0% | |
| CTACTTCCTGTGATAACATT+TGG | + | chr1_2:60696270-60696289 | Msa0081940:CDS | 35.0% | |
| TAATTGCAAGAAAATGCTCG+CGG | - | chr1_2:60696393-60696412 | None:intergenic | 35.0% | |
| ! | AGATTTTTGCAACATGGTCA+GGG | - | chr1_2:60696416-60696435 | None:intergenic | 35.0% |
| ! | AAGATTTTTGCAACATGGTC+AGG | - | chr1_2:60696417-60696436 | None:intergenic | 35.0% |
| AAGCTACTATACACACCAAT+GGG | + | chr1_2:60696631-60696650 | Msa0081940:CDS | 35.0% | |
| CTTGGTGAAAATTTCTCATC+TGG | - | chr1_2:60696676-60696695 | None:intergenic | 35.0% | |
| TTTGTCAGAACCTAATGACA+CGG | + | chr1_2:60696744-60696763 | Msa0081940:CDS | 35.0% | |
| CTTAATATCTCAAGTGGATG+AGG | - | chr1_2:60696811-60696830 | None:intergenic | 35.0% | |
| CATGTCATGATCTCTTTGTA+TGG | - | chr1_2:60696863-60696882 | None:intergenic | 35.0% | |
| !!! | TTTTCTCTCGCATCGATTTA+CGG | - | chr1_2:60696939-60696958 | None:intergenic | 35.0% |
| ! | TTGATACCAGCATTGTTGTT+GGG | + | chr1_2:60696998-60697017 | Msa0081940:CDS | 35.0% |
| AGTCCTTAAAAAGGTTTAGC+AGG | + | chr1_2:60697091-60697110 | Msa0081940:CDS | 35.0% | |
| ! | AAGCCTGCTAAACCTTTTTA+AGG | - | chr1_2:60697097-60697116 | None:intergenic | 35.0% |
| CCAATATTAACATCCTAGCA+GGG | - | chr1_2:60697161-60697180 | None:intergenic | 35.0% | |
| CCTGCTAGGATGTTAATATT+GGG | + | chr1_2:60697159-60697178 | Msa0081940:CDS | 35.0% | |
| CTGCTAGGATGTTAATATTG+GGG | + | chr1_2:60697160-60697179 | Msa0081940:CDS | 35.0% | |
| TGCTAGGATGTTAATATTGG+GGG | + | chr1_2:60697161-60697180 | Msa0081940:CDS | 35.0% | |
| AGAATATTCCTCTACAAGCA+GGG | - | chr1_2:60697344-60697363 | None:intergenic | 35.0% | |
| AAGAATATTCCTCTACAAGC+AGG | - | chr1_2:60697345-60697364 | None:intergenic | 35.0% | |
| ATTGTTCCTTCGATCTCCAT+TGG | + | chr1_2:60693998-60694017 | Msa0081940:CDS | 40.0% | |
| GATACCCATTGGAATCTCTA+TGG | + | chr1_2:60694125-60694144 | Msa0081940:CDS | 40.0% | |
| AAAACCACCGTTAGAGATGA+CGG | + | chr1_2:60694223-60694242 | Msa0081940:CDS | 40.0% | |
| AATGTTTGGAAAGGGGAACA+AGG | + | chr1_2:60694294-60694313 | Msa0081940:intron | 40.0% | |
| ATGTTTGGAAAGGGGAACAA+GGG | + | chr1_2:60694295-60694314 | Msa0081940:intron | 40.0% | |
| CAAGGGAATCATGAAAGAGA+AGG | + | chr1_2:60694312-60694331 | Msa0081940:CDS | 40.0% | |
| TCAAGTTTGTGATACTTGCG+CGG | + | chr1_2:60694374-60694393 | Msa0081940:CDS | 40.0% | |
| ! | AGAAACCCTCCTTAGCATTT+TGG | - | chr1_2:60694457-60694476 | None:intergenic | 40.0% |
| AATGCTAAGGAGGGTTTCTT+TGG | + | chr1_2:60694458-60694477 | Msa0081940:CDS | 40.0% | |
| TATGCTCAGATGTCACACTT+GGG | + | chr1_2:60694495-60694514 | Msa0081940:CDS | 40.0% | |
| GCCGTTATATCAAAGGTTTG+CGG | + | chr1_2:60694885-60694904 | Msa0081940:intron | 40.0% | |
| TTGCGCAATTTACCATGTGT+TGG | + | chr1_2:60694908-60694927 | Msa0081940:intron | 40.0% | |
| CCAATCCATAATCCAACACA+TGG | - | chr1_2:60694923-60694942 | None:intergenic | 40.0% | |
| CCATGTGTTGGATTATGGAT+TGG | + | chr1_2:60694920-60694939 | Msa0081940:intron | 40.0% | |
| GCTTAAACTTGTCGAGACAA+TGG | + | chr1_2:60694985-60695004 | Msa0081940:intron | 40.0% | |
| ! | TCTTAGTCCTCGTTTAGCTT+TGG | + | chr1_2:60695064-60695083 | Msa0081940:intron | 40.0% |
| TAGGTGATTGATCTTTGGCT+TGG | + | chr1_2:60695155-60695174 | Msa0081940:intron | 40.0% | |
| ! | AGGTGATTGATCTTTGGCTT+GGG | + | chr1_2:60695156-60695175 | Msa0081940:intron | 40.0% |
| !! | TTGATCTTTGGCTTGGGATT+CGG | + | chr1_2:60695162-60695181 | Msa0081940:intron | 40.0% |
| TCTTTACTTTCGACTTCCTG+AGG | - | chr1_2:60695399-60695418 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAAGAAACCA+AGG | + | chr1_2:60695416-60695435 | Msa0081940:CDS | 40.0% | |
| GAAACCAAGGAGCCAAATAA+TGG | + | chr1_2:60695429-60695448 | Msa0081940:CDS | 40.0% | |
| GCTGCATTTGAAGAAGTGAA+TGG | - | chr1_2:60695540-60695559 | None:intergenic | 40.0% | |
| TTTCGTCACTATTGTCGAAG+GGG | + | chr1_2:60695973-60695992 | Msa0081940:intron | 40.0% | |
| CATATATACCTCTGTGCACA+AGG | - | chr1_2:60696083-60696102 | None:intergenic | 40.0% | |
| ! | TGTGCACAGAGGTATATATG+AGG | + | chr1_2:60696083-60696102 | Msa0081940:CDS | 40.0% |
| GGTATATATGAGGCTGCTAA+AGG | + | chr1_2:60696093-60696112 | Msa0081940:CDS | 40.0% | |
| TTTAGGTGAGCATGAACTTC+TGG | - | chr1_2:60696138-60696157 | None:intergenic | 40.0% | |
| TGTTATCACAGGAAGTAGAG+AGG | - | chr1_2:60696268-60696287 | None:intergenic | 40.0% | |
| GACACTCTACTTGAAAAGCT+TGG | + | chr1_2:60696318-60696337 | Msa0081940:CDS | 40.0% | |
| ! | TTTTTGGATAAGCAGGAGTG+CGG | - | chr1_2:60696497-60696516 | None:intergenic | 40.0% |
| GAAGCTACTATACACACCAA+TGG | + | chr1_2:60696630-60696649 | Msa0081940:intron | 40.0% | |
| AGAATCAGCAATTCACCCAT+TGG | - | chr1_2:60696649-60696668 | None:intergenic | 40.0% | |
| ! | GTGTCATTAGGTTCTGACAA+AGG | - | chr1_2:60696745-60696764 | None:intergenic | 40.0% |
| GTTCAAGAACGTCAACTTTG+CGG | - | chr1_2:60696785-60696804 | None:intergenic | 40.0% | |
| CGGTCACTTAATATCTCAAG+TGG | - | chr1_2:60696817-60696836 | None:intergenic | 40.0% | |
| TTAAGTGACCGATCTGCTTA+TGG | + | chr1_2:60696826-60696845 | Msa0081940:CDS | 40.0% | |
| TACGGATCTGGTTAAGTTCT+TGG | - | chr1_2:60696921-60696940 | None:intergenic | 40.0% | |
| GTTGATACCAGCATTGTTGT+TGG | + | chr1_2:60696997-60697016 | Msa0081940:CDS | 40.0% | |
| GTCTTCATTATGCCAGAGAA+CGG | - | chr1_2:60697063-60697082 | None:intergenic | 40.0% | |
| TTCTCTGGCATAATGAAGAC+AGG | + | chr1_2:60697063-60697082 | Msa0081940:CDS | 40.0% | |
| CAGGAAGAGAGTCCTTAAAA+AGG | + | chr1_2:60697082-60697101 | Msa0081940:CDS | 40.0% | |
| !!! | TGTTGCTTTTTTTCCCTGCT+AGG | + | chr1_2:60697145-60697164 | Msa0081940:CDS | 40.0% |
| CCCTGCTAGGATGTTAATAT+TGG | + | chr1_2:60697158-60697177 | Msa0081940:CDS | 40.0% | |
| CCCAATATTAACATCCTAGC+AGG | - | chr1_2:60697162-60697181 | None:intergenic | 40.0% | |
| ! | GTGTATAAAACAAGGGCACA+TGG | + | chr1_2:60697254-60697273 | Msa0081940:three_prime_UTR | 40.0% |
| ! | CACATGGTTAGCTGAATGTT+AGG | + | chr1_2:60697270-60697289 | Msa0081940:three_prime_UTR | 40.0% |
| GTGGCCATAGAGATTCCAAT+GGG | - | chr1_2:60694132-60694151 | None:intergenic | 45.0% | |
| TGTGGCCATAGAGATTCCAA+TGG | - | chr1_2:60694133-60694152 | None:intergenic | 45.0% | |
| AATCTCTATGGCCACAACGA+CGG | + | chr1_2:60694137-60694156 | Msa0081940:CDS | 45.0% | |
| GTATGCTCAGATGTCACACT+TGG | + | chr1_2:60694494-60694513 | Msa0081940:CDS | 45.0% | |
| ATGCTCAGATGTCACACTTG+GGG | + | chr1_2:60694496-60694515 | Msa0081940:CDS | 45.0% | |
| TTTAAGCGAAACCCTACCCA+GGG | - | chr1_2:60694972-60694991 | None:intergenic | 45.0% | |
| ACCAAGGAGCCAAATAATGG+TGG | + | chr1_2:60695432-60695451 | Msa0081940:CDS | 45.0% | |
| ! | TCCACCATTATTTGGCTCCT+TGG | - | chr1_2:60695436-60695455 | None:intergenic | 45.0% |
| CTTCTGCGTTCATCATGTCA+AGG | - | chr1_2:60695587-60695606 | None:intergenic | 45.0% | |
| TGACATGATGAACGCAGAAG+TGG | + | chr1_2:60695587-60695606 | Msa0081940:CDS | 45.0% | |
| !! | TACTGATTCAGTGACAGCAG+TGG | + | chr1_2:60695626-60695645 | Msa0081940:CDS | 45.0% |
| ATCTGCGATGATAACCAGAG+TGG | + | chr1_2:60695726-60695745 | Msa0081940:CDS | 45.0% | |
| GTTCGGAGTCATTAGCATCT+TGG | + | chr1_2:60695884-60695903 | Msa0081940:CDS | 45.0% | |
| TTCGTCACTATTGTCGAAGG+GGG | + | chr1_2:60695974-60695993 | Msa0081940:intron | 45.0% | |
| CATGCTCACCTAAAATCTCG+AGG | + | chr1_2:60696144-60696163 | Msa0081940:CDS | 45.0% | |
| ! | CACGAGAACCTCGAGATTTT+AGG | - | chr1_2:60696155-60696174 | None:intergenic | 45.0% |
| CAAGGGAATGTCCAGTGAAA+CGG | - | chr1_2:60696185-60696204 | None:intergenic | 45.0% | |
| ACAGGAAGTAGAGAGGTGAT+TGG | - | chr1_2:60696261-60696280 | None:intergenic | 45.0% | |
| GGGGAACCAAATGTTATCAC+AGG | - | chr1_2:60696279-60696298 | None:intergenic | 45.0% | |
| GCATTATAATTGCCTGCACG+TGG | - | chr1_2:60696356-60696375 | None:intergenic | 45.0% | |
| !! | TTTTGGATAAGCAGGAGTGC+GGG | - | chr1_2:60696496-60696515 | None:intergenic | 45.0% |
| AGATATAGACCACTGCCTTG+CGG | - | chr1_2:60696712-60696731 | None:intergenic | 45.0% | |
| ! | AGCTTCTTGTCCGTGTCATT+AGG | - | chr1_2:60696757-60696776 | None:intergenic | 45.0% |
| CTCCAGATCCATAAGCAGAT+CGG | - | chr1_2:60696837-60696856 | None:intergenic | 45.0% | |
| GAGAGAAAAGACGCAAGGTA+TGG | + | chr1_2:60696950-60696969 | Msa0081940:CDS | 45.0% | |
| AGAAAAGACGCAAGGTATGG+TGG | + | chr1_2:60696953-60696972 | Msa0081940:CDS | 45.0% | |
| ! | ATACCAGCATTGTTGTTGGG+AGG | + | chr1_2:60697001-60697020 | Msa0081940:CDS | 45.0% |
| !! | TCCATGGTATCGGTCAGTAT+CGG | + | chr1_2:60697024-60697043 | Msa0081940:CDS | 45.0% |
| !! | GATATATAAATTATATTATT+TGG | + | chr1_2:60695798-60695817 | Msa0081940:intron | 5.0% |
| GTTCCTTCGATCTCCATTGG+TGG | + | chr1_2:60694001-60694020 | Msa0081940:CDS | 50.0% | |
| GATCCACCAATGGAGATCGA+AGG | - | chr1_2:60694007-60694026 | None:intergenic | 50.0% | |
| AACGTTCTGTTCCGTCGTTG+TGG | - | chr1_2:60694151-60694170 | None:intergenic | 50.0% | |
| CTCCTCACCGTCATCTCTAA+CGG | - | chr1_2:60694233-60694252 | None:intergenic | 50.0% | |
| ! | GTTAGAGATGACGGTGAGGA+GGG | + | chr1_2:60694232-60694251 | Msa0081940:intron | 50.0% |
| AGGAGGGCAGAGAGAGAATT+GGG | + | chr1_2:60694248-60694267 | Msa0081940:intron | 50.0% | |
| GATGTCACACTTGGGGAGTT+TGG | + | chr1_2:60694503-60694522 | Msa0081940:CDS | 50.0% | |
| ! | CTTTCTTGGCTTGAATGGGG+TGG | + | chr1_2:60694784-60694803 | Msa0081940:intron | 50.0% |
| GTTTAAGCGAAACCCTACCC+AGG | - | chr1_2:60694973-60694992 | None:intergenic | 50.0% | |
| GTGCAGATAAGATGCAGCAG+AGG | - | chr1_2:60695496-60695515 | None:intergenic | 50.0% | |
| ACTTCTTCAAATGCAGCGGC+TGG | + | chr1_2:60695543-60695562 | Msa0081940:CDS | 50.0% | |
| CGCAGAAGTGGCATCTTTGA+TGG | + | chr1_2:60695599-60695618 | Msa0081940:CDS | 50.0% | |
| TTCAGTGACAGCAGTGGTTG+CGG | + | chr1_2:60695632-60695651 | Msa0081940:CDS | 50.0% | |
| GGCAAAGGAGGAAGTAAAGC+AGG | + | chr1_2:60695653-60695672 | Msa0081940:CDS | 50.0% | |
| TCGCAGATGAACCATTCGCA+AGG | - | chr1_2:60695714-60695733 | None:intergenic | 50.0% | |
| TCGTCACTATTGTCGAAGGG+GGG | + | chr1_2:60695975-60695994 | Msa0081940:intron | 50.0% | |
| CACAAGGACATCCAAACCCT+GGG | - | chr1_2:60696067-60696086 | None:intergenic | 50.0% | |
| TTGGATGTCCTTGTGCACAG+AGG | + | chr1_2:60696072-60696091 | Msa0081940:CDS | 50.0% | |
| CGTGCAACTTTCCGTTTCAC+TGG | + | chr1_2:60696171-60696190 | Msa0081940:CDS | 50.0% | |
| CGTTTCACTGGACATTCCCT+TGG | + | chr1_2:60696183-60696202 | Msa0081940:CDS | 50.0% | |
| TTCACTGGACATTCCCTTGG+TGG | + | chr1_2:60696186-60696205 | Msa0081940:CDS | 50.0% | |
| ACATTCCCTTGGTGGAAGCT+TGG | + | chr1_2:60696194-60696213 | Msa0081940:CDS | 50.0% | |
| TAGTGCCAAGCTTCCACCAA+GGG | - | chr1_2:60696202-60696221 | None:intergenic | 50.0% | |
| TGCGGCAGAAGATTATGGCT+TGG | - | chr1_2:60696694-60696713 | None:intergenic | 50.0% | |
| AGCCATAATCTTCTGCCGCA+AGG | + | chr1_2:60696694-60696713 | Msa0081940:CDS | 50.0% | |
| TGCCTTGCGGCAGAAGATTA+TGG | - | chr1_2:60696699-60696718 | None:intergenic | 50.0% | |
| AGAACGTCAACTTTGCGGCT+CGG | - | chr1_2:60696780-60696799 | None:intergenic | 50.0% | |
| GACCGATCTGCTTATGGATC+TGG | + | chr1_2:60696832-60696851 | Msa0081940:CDS | 50.0% | |
| CGATCTGCTTATGGATCTGG+AGG | + | chr1_2:60696835-60696854 | Msa0081940:CDS | 50.0% | |
| !! | CTCGCATCGATTTACGGATC+TGG | - | chr1_2:60696933-60696952 | None:intergenic | 50.0% |
| GATGCGAGAGAAAAGACGCA+AGG | + | chr1_2:60696945-60696964 | Msa0081940:CDS | 50.0% | |
| ATGCTGGTATCAACTCGTCG+CGG | - | chr1_2:60696991-60697010 | None:intergenic | 50.0% | |
| ! | CATTGTTGTTGGGAGGTCCA+TGG | + | chr1_2:60697008-60697027 | Msa0081940:CDS | 50.0% |
| TGTTGGGAGGTCCATGGTAT+CGG | + | chr1_2:60697014-60697033 | Msa0081940:CDS | 50.0% | |
| TTATGCCAGAGAACGGTGAC+TGG | - | chr1_2:60697056-60697075 | None:intergenic | 50.0% | |
| CTCAAGAACCCTGCTTGTAG+AGG | + | chr1_2:60697333-60697352 | Msa0081940:three_prime_UTR | 50.0% | |
| CACCGCATCTACCGTAAGTG+CGG | + | chr1_2:60694051-60694070 | Msa0081940:CDS | 55.0% | |
| CACCGCACTTACGGTAGATG+CGG | - | chr1_2:60694056-60694075 | None:intergenic | 55.0% | |
| GCATCTACCGTAAGTGCGGT+GGG | + | chr1_2:60694055-60694074 | Msa0081940:CDS | 55.0% | |
| TTCACGACCCACCGCACTTA+CGG | - | chr1_2:60694065-60694084 | None:intergenic | 55.0% | |
| CGACGGAACAGAACGTTCAG+TGG | + | chr1_2:60694154-60694173 | Msa0081940:CDS | 55.0% | |
| CTCACCGTCATCTCTAACGG+TGG | - | chr1_2:60694230-60694249 | None:intergenic | 55.0% | |
| ! | CACCGTTAGAGATGACGGTG+AGG | + | chr1_2:60694228-60694247 | Msa0081940:intron | 55.0% |
| ! | CGTTAGAGATGACGGTGAGG+AGG | + | chr1_2:60694231-60694250 | Msa0081940:intron | 55.0% |
| GAGGAGGGCAGAGAGAGAAT+TGG | + | chr1_2:60694247-60694266 | Msa0081940:intron | 55.0% | |
| TCAAATGCAGCGGCTGGTGA+AGG | + | chr1_2:60695549-60695568 | Msa0081940:CDS | 55.0% | |
| CTCGTTCGTCACCTTGCGAA+TGG | + | chr1_2:60695700-60695719 | Msa0081940:CDS | 55.0% | |
| GCACAAGGACATCCAAACCC+TGG | - | chr1_2:60696068-60696087 | None:intergenic | 55.0% | |
| GTAGTGCCAAGCTTCCACCA+AGG | - | chr1_2:60696203-60696222 | None:intergenic | 55.0% | |
| GGTTCCCCTTCCATCATGTG+TGG | + | chr1_2:60696291-60696310 | Msa0081940:CDS | 55.0% | |
| TCCCCTTCCATCATGTGTGG+AGG | + | chr1_2:60696294-60696313 | Msa0081940:CDS | 55.0% | |
| ! | GCCTCCACACATGATGGAAG+GGG | - | chr1_2:60696298-60696317 | None:intergenic | 55.0% |
| ! | CGCCTCCACACATGATGGAA+GGG | - | chr1_2:60696299-60696318 | None:intergenic | 55.0% |
| ! | TCGCCTCCACACATGATGGA+AGG | - | chr1_2:60696300-60696319 | None:intergenic | 55.0% |
| AGTGTCGCCTCCACACATGA+TGG | - | chr1_2:60696304-60696323 | None:intergenic | 55.0% | |
| ! | CAGGAGTGCGGGACTTTACT+TGG | - | chr1_2:60696485-60696504 | None:intergenic | 55.0% |
| AATCTTCTGCCGCAAGGCAG+TGG | + | chr1_2:60696700-60696719 | Msa0081940:CDS | 55.0% | |
| ACTCGTCGCGGTAGTACAAG+AGG | - | chr1_2:60696979-60696998 | None:intergenic | 55.0% | |
| GGACCTCCCAACAACAATGC+TGG | - | chr1_2:60697007-60697026 | None:intergenic | 55.0% | |
| GCCGATACTGACCGATACCA+TGG | - | chr1_2:60697028-60697047 | None:intergenic | 55.0% | |
| CGCACTTACGGTAGATGCGG+TGG | - | chr1_2:60694053-60694072 | None:intergenic | 60.0% | |
| CGCATCTACCGTAAGTGCGG+TGG | + | chr1_2:60694054-60694073 | Msa0081940:CDS | 60.0% | |
| ! | GTCTCTCGACGACGCCGTTT+TGG | + | chr1_2:60694180-60694199 | Msa0081940:CDS | 60.0% |
| GACAGCAGTGGTTGCGGCAA+AGG | + | chr1_2:60695638-60695657 | Msa0081940:CDS | 60.0% | |
| AGCAGTGGTTGCGGCAAAGG+AGG | + | chr1_2:60695641-60695660 | Msa0081940:CDS | 60.0% | |
| ATTGCCTGCACGTGGCTTCG+CGG | - | chr1_2:60696348-60696367 | None:intergenic | 60.0% | |
| CAGAGAACGGTGACTGGCGT+TGG | - | chr1_2:60697050-60697069 | None:intergenic | 60.0% | |
| CAACGCCAGTCACCGTTCTC+TGG | + | chr1_2:60697048-60697067 | Msa0081940:CDS | 60.0% | |
| CCTGCACGTGGCTTCGCGGC+AGG | - | chr1_2:60696344-60696363 | None:intergenic | 75.0% | |
| CCTGCCGCGAAGCCACGTGC+AGG | + | chr1_2:60696341-60696360 | Msa0081940:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 60693971 | 60697405 | 60693971 | ID=Msa0081940;Name=Msa0081940 |
| chr1_2 | mRNA | 60693971 | 60697405 | 60693971 | ID=Msa0081940-mRNA-1;Parent=Msa0081940;Name=Msa0081940-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.8|0.66|1|1|1|6|196|677 |
| chr1_2 | exon | 60693971 | 60694244 | 60693971 | ID=Msa0081940-mRNA-1:exon:19848;Parent=Msa0081940-mRNA-1 |
| chr1_2 | exon | 60694307 | 60694548 | 60694307 | ID=Msa0081940-mRNA-1:exon:19849;Parent=Msa0081940-mRNA-1 |
| chr1_2 | exon | 60695309 | 60695770 | 60695309 | ID=Msa0081940-mRNA-1:exon:19850;Parent=Msa0081940-mRNA-1 |
| chr1_2 | exon | 60695883 | 60695942 | 60695883 | ID=Msa0081940-mRNA-1:exon:19851;Parent=Msa0081940-mRNA-1 |
| chr1_2 | exon | 60696069 | 60696485 | 60696069 | ID=Msa0081940-mRNA-1:exon:19852;Parent=Msa0081940-mRNA-1 |
| chr1_2 | exon | 60696631 | 60697405 | 60696631 | ID=Msa0081940-mRNA-1:exon:19853;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60693971 | 60694244 | 60693971 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60694307 | 60694548 | 60694307 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60695309 | 60695770 | 60695309 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60695883 | 60695942 | 60695883 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60696069 | 60696485 | 60696069 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | CDS | 60696631 | 60697209 | 60696631 | ID=Msa0081940-mRNA-1:cds;Parent=Msa0081940-mRNA-1 |
| chr1_2 | three_prime_UTR | 60697210 | 60697405 | 60697210 | ID=Msa0081940-mRNA-1:three_prime_utr;Parent=Msa0081940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
