Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182020 | XP_003592075.1 | 94.602 | 352 | 15 | 3 | 1 | 348 | 1 | 352 | 2.39e-150 | 438 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182020 | sp|Q9FH54|EF114_ARATH | 51.333 | 150 | 55 | 3 | 98 | 242 | 51 | 187 | 1.86e-35 | 132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182020 | G7IBX2 | 94.602 | 352 | 15 | 3 | 1 | 348 | 1 | 352 | 1.14e-150 | 438 |
Gene ID | Type | Classification |
---|---|---|
Msa0182020 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0033970 | Msa0182020 | 0.873944 | 9.923687e-68 | -8.615850e-47 |
Msa0039890 | Msa0182020 | 0.813785 | 2.146995e-51 | -8.615850e-47 |
Msa0069150 | Msa0182020 | -0.818850 | 1.580826e-52 | -8.615850e-47 |
Msa0077370 | Msa0182020 | 0.820901 | 5.368546e-53 | -8.615850e-47 |
Msa0081920 | Msa0182020 | 0.831024 | 2.110618e-55 | -8.615850e-47 |
Msa0083240 | Msa0182020 | 0.802308 | 5.965974e-49 | -8.615850e-47 |
Msa0086190 | Msa0182020 | 0.923189 | 3.684062e-89 | -8.615850e-47 |
Msa0087550 | Msa0182020 | 0.838094 | 3.527330e-57 | -8.615850e-47 |
Msa0100750 | Msa0182020 | 0.841725 | 3.992241e-58 | -8.615850e-47 |
Msa0125320 | Msa0182020 | 0.800255 | 1.570413e-48 | -8.615850e-47 |
Msa0127870 | Msa0182020 | 0.801768 | 7.705779e-49 | -8.615850e-47 |
Msa0128030 | Msa0182020 | 0.865725 | 4.795989e-65 | -8.615850e-47 |
Msa0129640 | Msa0182020 | 0.848889 | 4.595739e-60 | -8.615850e-47 |
Msa0132430 | Msa0182020 | 0.905875 | 2.703362e-80 | -8.615850e-47 |
Msa0134270 | Msa0182020 | 0.834574 | 2.769821e-56 | -8.615850e-47 |
Msa0147790 | Msa0182020 | 0.806536 | 7.841656e-50 | -8.615850e-47 |
Msa0174010 | Msa0182020 | 0.807379 | 5.202789e-50 | -8.615850e-47 |
Msa0174100 | Msa0182020 | 0.903607 | 2.911466e-79 | -8.615850e-47 |
Msa0180820 | Msa0182020 | 0.816540 | 5.246352e-52 | -8.615850e-47 |
Msa0182020 | Msa0195810 | -0.812222 | 4.725222e-51 | -8.615850e-47 |
Msa0182020 | Msa0231830 | 0.811267 | 7.625406e-51 | -8.615850e-47 |
Msa0182020 | Msa0254640 | 0.805807 | 1.116873e-49 | -8.615850e-47 |
Msa0182020 | Msa0265480 | 0.805034 | 1.621835e-49 | -8.615850e-47 |
Msa0182020 | Msa0268070 | 0.814843 | 1.252980e-51 | -8.615850e-47 |
Msa0182020 | Msa0315720 | -0.807091 | 5.987290e-50 | -8.615850e-47 |
Msa0182020 | Msa0340370 | 0.823932 | 1.061066e-53 | -8.615850e-47 |
Msa0182020 | Msa0367540 | -0.801088 | 1.061655e-48 | -8.615850e-47 |
Msa0182020 | Msa0372700 | 0.824286 | 8.764546e-54 | -8.615850e-47 |
Msa0182020 | Msa0390550 | 0.804026 | 2.632129e-49 | -8.615850e-47 |
Msa0182020 | Msa0414720 | 0.805104 | 1.568352e-49 | -8.615850e-47 |
Msa0182020 | Msa0459630 | 0.813654 | 2.294436e-51 | -8.615850e-47 |
Msa0182020 | Msa0473810 | 0.808001 | 3.837190e-50 | -8.615850e-47 |
Msa0182020 | Msa0476070 | 0.824854 | 6.440748e-54 | -8.615850e-47 |
Msa0182020 | Msa0480770 | 0.890455 | 9.701835e-74 | -8.615850e-47 |
Msa0182020 | Msa0481100 | 0.813995 | 1.930010e-51 | -8.615850e-47 |
Msa0182020 | Msa0506360 | 0.837347 | 5.484785e-57 | -8.615850e-47 |
Msa0182020 | Msa0506370 | 0.834750 | 2.501452e-56 | -8.615850e-47 |
Msa0182020 | Msa0517990 | 0.800815 | 1.207219e-48 | -8.615850e-47 |
Msa0182020 | Msa0519910 | 0.803276 | 3.765465e-49 | -8.615850e-47 |
Msa0182020 | Msa0528990 | 0.803235 | 3.839496e-49 | -8.615850e-47 |
Msa0182020 | Msa0560280 | 0.835548 | 1.573569e-56 | -8.615850e-47 |
Msa0182020 | Msa0577370 | 0.806328 | 8.676582e-50 | -8.615850e-47 |
Msa0182020 | Msa0601790 | 0.801902 | 7.230700e-49 | -8.615850e-47 |
Msa0182020 | Msa0609420 | 0.821949 | 3.075540e-53 | -8.615850e-47 |
Msa0182020 | Msa0614290 | 0.806311 | 8.748580e-50 | -8.615850e-47 |
Msa0182020 | Msa0638820 | 0.822743 | 2.011618e-53 | -8.615850e-47 |
Msa0182020 | Msa0650060 | 0.819546 | 1.097120e-52 | -8.615850e-47 |
Msa0182020 | Msa0652700 | 0.899076 | 2.834336e-77 | -8.615850e-47 |
Msa0182020 | Msa0697510 | 0.818709 | 1.701395e-52 | -8.615850e-47 |
Msa0182020 | Msa0697520 | 0.822994 | 1.758844e-53 | -8.615850e-47 |
Msa0182020 | Msa0708600 | 0.931652 | 2.749883e-94 | -8.615850e-47 |
Msa0182020 | Msa0713060 | 0.834571 | 2.776043e-56 | -8.615850e-47 |
Msa0182020 | Msa0719730 | 0.838824 | 2.285705e-57 | -8.615850e-47 |
Msa0182020 | Msa0725070 | 0.815162 | 1.064674e-51 | -8.615850e-47 |
Msa0182020 | Msa0751670 | 0.800322 | 1.521463e-48 | -8.615850e-47 |
Msa0182020 | Msa0802740 | 0.842652 | 2.269094e-58 | -8.615850e-47 |
Msa0182020 | Msa0816630 | 0.829224 | 5.803001e-55 | -8.615850e-47 |
Msa0182020 | Msa0832620 | 0.842835 | 2.028338e-58 | -8.615850e-47 |
Msa0182020 | Msa0841030 | 0.823714 | 1.193774e-53 | -8.615850e-47 |
Msa0182020 | Msa0858170 | 0.837136 | 6.209464e-57 | -8.615850e-47 |
Msa0182020 | Msa0863940 | 0.828577 | 8.319976e-55 | -8.615850e-47 |
Msa0182020 | Msa0870120 | 0.841149 | 5.661624e-58 | -8.615850e-47 |
Msa0182020 | Msa0876790 | 0.843839 | 1.094886e-58 | -8.615850e-47 |
Msa0182020 | Msa0935830 | 0.827134 | 1.850260e-54 | -8.615850e-47 |
Msa0182020 | Msa0945230 | 0.891658 | 3.248401e-74 | -8.615850e-47 |
Msa0182020 | Msa0965780 | 0.816468 | 5.444568e-52 | -8.615850e-47 |
Msa0182020 | Msa0973000 | 0.826571 | 2.522377e-54 | -8.615850e-47 |
Msa0182020 | Msa0984290 | 0.805850 | 1.093911e-49 | -8.615850e-47 |
Msa0182020 | Msa1000800 | 0.819509 | 1.118886e-52 | -8.615850e-47 |
Msa0182020 | Msa1016960 | 0.802465 | 5.537511e-49 | -8.615850e-47 |
Msa0182020 | Msa1038940 | 0.837071 | 6.450844e-57 | -8.615850e-47 |
Msa0182020 | Msa1062080 | 0.816931 | 4.287126e-52 | -8.615850e-47 |
Msa0182020 | Msa1068380 | 0.823760 | 1.164389e-53 | -8.615850e-47 |
Msa0182020 | Msa1074210 | 0.802913 | 4.476110e-49 | -8.615850e-47 |
Msa0182020 | Msa1121300 | 0.835390 | 1.725612e-56 | -8.615850e-47 |
Msa0182020 | Msa1126870 | 0.804863 | 1.761212e-49 | -8.615850e-47 |
Msa0182020 | Msa1156490 | 0.861015 | 1.379865e-63 | -8.615850e-47 |
Msa0182020 | Msa1199870 | 0.839525 | 1.504599e-57 | -8.615850e-47 |
Msa0182020 | Msa1204240 | 0.828782 | 7.424783e-55 | -8.615850e-47 |
Msa0182020 | Msa1213860 | 0.810448 | 1.146821e-50 | -8.615850e-47 |
Msa0182020 | Msa1217260 | 0.849579 | 2.952863e-60 | -8.615850e-47 |
Msa0182020 | Msa1217950 | 0.809286 | 2.039502e-50 | -8.615850e-47 |
Msa0182020 | Msa1219790 | 0.819214 | 1.306398e-52 | -8.615850e-47 |
Msa0182020 | Msa1252810 | 0.832962 | 7.007720e-56 | -8.615850e-47 |
Msa0182020 | Msa1267080 | 0.816551 | 5.216796e-52 | -8.615850e-47 |
Msa0182020 | Msa1302340 | 0.829476 | 5.040203e-55 | -8.615850e-47 |
Msa0182020 | Msa1322410 | 0.831901 | 1.283520e-55 | -8.615850e-47 |
Msa0182020 | Msa1358090 | 0.844355 | 7.957843e-59 | -8.615850e-47 |
Msa0182020 | Msa1370080 | 0.806915 | 6.522728e-50 | -8.615850e-47 |
Msa0182020 | Msa1375730 | 0.826168 | 3.144893e-54 | -8.615850e-47 |
Msa0182020 | Msa1379020 | 0.813675 | 2.269977e-51 | -8.615850e-47 |
Msa0182020 | Msa1401550 | 0.813876 | 2.050253e-51 | -8.615850e-47 |
Msa0182020 | Msa1405420 | 0.803257 | 3.799784e-49 | -8.615850e-47 |
Msa0182020 | Msa1412410 | 0.851825 | 6.894460e-61 | -8.615850e-47 |
Msa0182020 | Msa1427860 | 0.845430 | 4.082515e-59 | -8.615850e-47 |
Msa0182020 | Msa1462640 | 0.809667 | 1.689200e-50 | -8.615850e-47 |
Msa0182020 | Msa1464020 | 0.829069 | 6.326621e-55 | -8.615850e-47 |
Msa0182020 | Msa1465860 | 0.832664 | 8.306820e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182020 | MtrunA17_Chr1g0201671 | 94.602 | 352 | 15 | 3 | 1 | 348 | 1 | 352 | 2.20e-154 | 438 |
Msa0182020 | MtrunA17_Chr6g0464581 | 56.017 | 241 | 82 | 4 | 128 | 352 | 171 | 403 | 1.21e-47 | 166 |
Msa0182020 | MtrunA17_Chr7g0221471 | 43.827 | 162 | 63 | 4 | 108 | 258 | 11 | 155 | 9.35e-35 | 125 |
Msa0182020 | MtrunA17_Chr8g0383591 | 52.713 | 129 | 52 | 3 | 124 | 248 | 132 | 255 | 4.69e-34 | 127 |
Msa0182020 | MtrunA17_Chr3g0129421 | 48.087 | 183 | 65 | 4 | 83 | 238 | 106 | 285 | 1.59e-32 | 124 |
Msa0182020 | MtrunA17_Chr7g0221501 | 62.500 | 88 | 32 | 1 | 109 | 196 | 24 | 110 | 3.94e-32 | 119 |
Msa0182020 | MtrunA17_Chr8g0375031 | 69.697 | 66 | 20 | 0 | 127 | 192 | 115 | 180 | 2.86e-30 | 115 |
Msa0182020 | MtrunA17_Chr2g0334031 | 42.484 | 153 | 74 | 3 | 98 | 239 | 78 | 227 | 4.16e-30 | 118 |
Msa0182020 | MtrunA17_Chr3g0131601 | 62.281 | 114 | 39 | 1 | 83 | 196 | 26 | 135 | 1.40e-29 | 114 |
Msa0182020 | MtrunA17_Chr2g0295421 | 42.484 | 153 | 77 | 2 | 60 | 201 | 8 | 160 | 6.39e-29 | 112 |
Msa0182020 | MtrunA17_Chr4g0044871 | 46.512 | 129 | 63 | 2 | 137 | 260 | 96 | 223 | 7.60e-29 | 111 |
Msa0182020 | MtrunA17_Chr8g0344961 | 51.961 | 102 | 39 | 1 | 97 | 198 | 94 | 185 | 1.30e-28 | 114 |
Msa0182020 | MtrunA17_Chr4g0044881 | 78.689 | 61 | 13 | 0 | 133 | 193 | 110 | 170 | 1.73e-28 | 110 |
Msa0182020 | MtrunA17_Chr4g0044901 | 84.211 | 57 | 9 | 0 | 137 | 193 | 96 | 152 | 3.33e-28 | 110 |
Msa0182020 | MtrunA17_Chr4g0044911 | 84.211 | 57 | 9 | 0 | 137 | 193 | 96 | 152 | 4.48e-28 | 109 |
Msa0182020 | MtrunA17_Chr1g0195151 | 44.915 | 118 | 54 | 1 | 132 | 249 | 72 | 178 | 1.61e-27 | 110 |
Msa0182020 | MtrunA17_Chr2g0316931 | 54.639 | 97 | 37 | 1 | 136 | 232 | 30 | 119 | 1.93e-25 | 102 |
Msa0182020 | MtrunA17_Chr2g0282651 | 50.485 | 103 | 48 | 1 | 102 | 201 | 35 | 137 | 3.08e-25 | 102 |
Msa0182020 | MtrunA17_Chr8g0335321 | 56.818 | 88 | 36 | 2 | 135 | 221 | 94 | 180 | 3.64e-25 | 101 |
Msa0182020 | MtrunA17_Chr5g0438831 | 54.444 | 90 | 40 | 1 | 105 | 193 | 13 | 102 | 1.54e-24 | 101 |
Msa0182020 | MtrunA17_Chr4g0055761 | 72.059 | 68 | 18 | 1 | 135 | 201 | 143 | 210 | 6.33e-24 | 99.4 |
Msa0182020 | MtrunA17_Chr3g0099871 | 72.581 | 62 | 17 | 0 | 136 | 197 | 26 | 87 | 2.10e-23 | 97.1 |
Msa0182020 | MtrunA17_Chr8g0335331 | 66.176 | 68 | 22 | 1 | 130 | 196 | 118 | 185 | 2.25e-23 | 96.3 |
Msa0182020 | MtrunA17_Chr8g0335311 | 69.355 | 62 | 18 | 1 | 136 | 196 | 95 | 156 | 2.33e-23 | 95.9 |
Msa0182020 | MtrunA17_Chr4g0046161 | 58.904 | 73 | 29 | 1 | 127 | 198 | 47 | 119 | 2.80e-23 | 93.6 |
Msa0182020 | MtrunA17_Chr4g0055781 | 68.657 | 67 | 20 | 1 | 134 | 199 | 99 | 165 | 3.10e-23 | 97.1 |
Msa0182020 | MtrunA17_Chr1g0186731 | 44.167 | 120 | 63 | 3 | 127 | 242 | 11 | 130 | 3.23e-23 | 94.0 |
Msa0182020 | MtrunA17_Chr2g0283181 | 49.550 | 111 | 46 | 3 | 90 | 193 | 99 | 206 | 3.54e-23 | 97.8 |
Msa0182020 | MtrunA17_Chr6g0461941 | 51.389 | 144 | 59 | 4 | 117 | 257 | 2 | 137 | 4.13e-23 | 95.9 |
Msa0182020 | MtrunA17_Chr1g0158971 | 66.667 | 66 | 18 | 1 | 135 | 196 | 113 | 178 | 5.18e-23 | 98.2 |
Msa0182020 | MtrunA17_Chr4g0055801 | 69.231 | 65 | 19 | 1 | 133 | 196 | 150 | 214 | 5.83e-23 | 97.4 |
Msa0182020 | MtrunA17_Chr5g0396911 | 68.966 | 58 | 18 | 0 | 135 | 192 | 110 | 167 | 1.71e-22 | 96.3 |
Msa0182020 | MtrunA17_Chr5g0438801 | 70.690 | 58 | 17 | 0 | 136 | 193 | 50 | 107 | 1.72e-22 | 95.9 |
Msa0182020 | MtrunA17_Chr4g0026881 | 43.651 | 126 | 69 | 2 | 72 | 196 | 33 | 157 | 1.91e-22 | 94.7 |
Msa0182020 | MtrunA17_Chr1g0170531 | 63.235 | 68 | 24 | 1 | 130 | 196 | 82 | 149 | 2.31e-22 | 94.4 |
Msa0182020 | MtrunA17_Chr2g0297331 | 67.692 | 65 | 20 | 1 | 131 | 194 | 8 | 72 | 2.34e-22 | 91.3 |
Msa0182020 | MtrunA17_Chr2g0283171 | 65.672 | 67 | 21 | 2 | 134 | 198 | 60 | 126 | 2.70e-22 | 92.0 |
Msa0182020 | MtrunA17_Chr7g0250731 | 66.667 | 63 | 20 | 1 | 135 | 196 | 59 | 121 | 3.06e-22 | 93.2 |
Msa0182020 | MtrunA17_Chr7g0250721 | 66.667 | 63 | 20 | 1 | 135 | 196 | 59 | 121 | 5.03e-22 | 92.8 |
Msa0182020 | MtrunA17_Chr7g0250711 | 66.667 | 63 | 20 | 1 | 135 | 196 | 58 | 120 | 5.06e-22 | 92.8 |
Msa0182020 | MtrunA17_Chr2g0323171 | 64.179 | 67 | 23 | 1 | 134 | 200 | 62 | 127 | 5.23e-22 | 92.0 |
Msa0182020 | MtrunA17_Chr1g0184081 | 59.740 | 77 | 30 | 1 | 118 | 193 | 2 | 78 | 5.63e-22 | 90.9 |
Msa0182020 | MtrunA17_Chr8g0367911 | 70.175 | 57 | 17 | 0 | 136 | 192 | 43 | 99 | 8.62e-22 | 94.0 |
Msa0182020 | MtrunA17_Chr3g0126321 | 59.420 | 69 | 23 | 1 | 135 | 198 | 111 | 179 | 9.72e-22 | 94.7 |
Msa0182020 | MtrunA17_Chr3g0137174 | 68.333 | 60 | 19 | 0 | 136 | 195 | 7 | 66 | 1.43e-21 | 90.9 |
Msa0182020 | MtrunA17_Chr4g0002631 | 64.516 | 62 | 22 | 0 | 134 | 195 | 5 | 66 | 2.84e-21 | 90.1 |
Msa0182020 | MtrunA17_Chr1g0196781 | 50.526 | 95 | 46 | 1 | 121 | 215 | 136 | 229 | 3.07e-21 | 92.8 |
Msa0182020 | MtrunA17_Chr2g0333011 | 64.516 | 62 | 22 | 0 | 135 | 196 | 5 | 66 | 3.40e-21 | 89.4 |
Msa0182020 | MtrunA17_Chr5g0425561 | 67.797 | 59 | 19 | 0 | 135 | 193 | 171 | 229 | 5.47e-21 | 92.8 |
Msa0182020 | MtrunA17_Chr8g0387801 | 53.659 | 82 | 36 | 1 | 135 | 216 | 105 | 184 | 6.53e-21 | 92.0 |
Msa0182020 | MtrunA17_Chr6g0486701 | 65.517 | 58 | 20 | 0 | 137 | 194 | 44 | 101 | 6.62e-21 | 89.7 |
Msa0182020 | MtrunA17_Chr3g0115631 | 66.102 | 59 | 20 | 0 | 135 | 193 | 148 | 206 | 9.07e-21 | 92.0 |
Msa0182020 | MtrunA17_Chr8g0390091 | 67.241 | 58 | 19 | 0 | 137 | 194 | 37 | 94 | 1.34e-20 | 89.4 |
Msa0182020 | MtrunA17_Chr4g0063751 | 51.220 | 82 | 38 | 1 | 135 | 216 | 5 | 84 | 1.46e-20 | 89.0 |
Msa0182020 | MtrunA17_Chr4g0003421 | 66.102 | 59 | 20 | 0 | 135 | 193 | 38 | 96 | 2.01e-20 | 89.4 |
Msa0182020 | MtrunA17_Chr7g0261181 | 49.000 | 100 | 50 | 1 | 136 | 234 | 12 | 111 | 2.58e-20 | 85.9 |
Msa0182020 | MtrunA17_Chr4g0026931 | 65.625 | 64 | 21 | 1 | 134 | 196 | 128 | 191 | 2.60e-20 | 89.4 |
Msa0182020 | MtrunA17_Chr2g0282621 | 67.213 | 61 | 20 | 0 | 133 | 193 | 11 | 71 | 2.88e-20 | 87.0 |
Msa0182020 | MtrunA17_Chr2g0331231 | 41.667 | 108 | 53 | 1 | 87 | 194 | 1 | 98 | 3.64e-20 | 87.4 |
Msa0182020 | MtrunA17_Chr3g0140161 | 65.517 | 58 | 20 | 0 | 137 | 194 | 43 | 100 | 3.96e-20 | 87.0 |
Msa0182020 | MtrunA17_Chr8g0382491 | 64.407 | 59 | 21 | 0 | 135 | 193 | 111 | 169 | 4.37e-20 | 89.0 |
Msa0182020 | MtrunA17_Chr7g0261101 | 67.742 | 62 | 19 | 1 | 133 | 193 | 16 | 77 | 4.44e-20 | 85.5 |
Msa0182020 | MtrunA17_Chr5g0437371 | 68.421 | 57 | 18 | 0 | 136 | 192 | 65 | 121 | 5.96e-20 | 89.4 |
Msa0182020 | MtrunA17_Chr1g0196871 | 56.579 | 76 | 32 | 1 | 127 | 201 | 6 | 81 | 6.76e-20 | 83.6 |
Msa0182020 | MtrunA17_Chr7g0232261 | 55.405 | 74 | 30 | 1 | 137 | 207 | 61 | 134 | 7.23e-20 | 87.4 |
Msa0182020 | MtrunA17_Chr7g0275841 | 46.753 | 77 | 41 | 0 | 120 | 196 | 11 | 87 | 7.63e-20 | 85.9 |
Msa0182020 | MtrunA17_Chr3g0134161 | 62.069 | 58 | 22 | 0 | 137 | 194 | 45 | 102 | 8.30e-20 | 85.5 |
Msa0182020 | MtrunA17_Chr8g0334801 | 55.263 | 76 | 32 | 1 | 137 | 212 | 52 | 125 | 8.64e-20 | 86.7 |
Msa0182020 | MtrunA17_Chr2g0324131 | 63.333 | 60 | 22 | 0 | 135 | 194 | 216 | 275 | 8.74e-20 | 90.1 |
Msa0182020 | MtrunA17_Chr1g0186671 | 67.797 | 59 | 18 | 1 | 136 | 193 | 18 | 76 | 9.93e-20 | 84.3 |
Msa0182020 | MtrunA17_Chr5g0401871 | 61.667 | 60 | 23 | 0 | 135 | 194 | 23 | 82 | 1.02e-19 | 85.5 |
Msa0182020 | MtrunA17_Chr7g0261151 | 70.000 | 60 | 17 | 1 | 136 | 194 | 19 | 78 | 1.04e-19 | 84.3 |
Msa0182020 | MtrunA17_Chr8g0378811 | 49.412 | 85 | 36 | 2 | 125 | 202 | 38 | 122 | 1.39e-19 | 87.4 |
Msa0182020 | MtrunA17_Chr4g0023411 | 63.333 | 60 | 22 | 0 | 134 | 193 | 62 | 121 | 2.00e-19 | 85.1 |
Msa0182020 | MtrunA17_Chr4g0055951 | 63.793 | 58 | 21 | 0 | 137 | 194 | 74 | 131 | 2.45e-19 | 86.3 |
Msa0182020 | MtrunA17_Chr7g0257911 | 68.421 | 57 | 18 | 0 | 137 | 193 | 31 | 87 | 3.35e-19 | 86.7 |
Msa0182020 | MtrunA17_Chr1g0183981 | 52.941 | 85 | 35 | 2 | 109 | 192 | 51 | 131 | 3.55e-19 | 85.1 |
Msa0182020 | MtrunA17_Chr4g0066931 | 55.072 | 69 | 27 | 1 | 128 | 192 | 40 | 108 | 3.69e-19 | 87.4 |
Msa0182020 | MtrunA17_Chr1g0153151 | 62.069 | 58 | 22 | 0 | 137 | 194 | 44 | 101 | 4.43e-19 | 84.0 |
Msa0182020 | MtrunA17_Chr5g0399441 | 53.333 | 75 | 34 | 1 | 120 | 194 | 12 | 85 | 4.91e-19 | 83.6 |
Msa0182020 | MtrunA17_Chr7g0217991 | 62.712 | 59 | 22 | 0 | 134 | 192 | 39 | 97 | 4.95e-19 | 88.2 |
Msa0182020 | MtrunA17_Chr6g0453661 | 62.712 | 59 | 22 | 0 | 134 | 192 | 35 | 93 | 5.08e-19 | 87.8 |
Msa0182020 | MtrunA17_Chr1g0184011 | 53.947 | 76 | 34 | 1 | 118 | 192 | 65 | 140 | 6.70e-19 | 84.3 |
Msa0182020 | MtrunA17_Chr8g0340311 | 63.158 | 57 | 21 | 0 | 137 | 193 | 47 | 103 | 7.62e-19 | 84.0 |
Msa0182020 | MtrunA17_Chr6g0473741 | 46.392 | 97 | 44 | 2 | 122 | 212 | 45 | 139 | 7.82e-19 | 84.3 |
Msa0182020 | MtrunA17_Chr7g0253424 | 56.061 | 66 | 29 | 0 | 136 | 201 | 38 | 103 | 1.20e-18 | 84.7 |
Msa0182020 | MtrunA17_Chr5g0432821 | 60.656 | 61 | 24 | 0 | 133 | 193 | 120 | 180 | 1.22e-18 | 85.1 |
Msa0182020 | MtrunA17_Chr8g0350701 | 50.633 | 79 | 37 | 1 | 116 | 192 | 4 | 82 | 1.29e-18 | 85.1 |
Msa0182020 | MtrunA17_Chr5g0412641 | 66.667 | 57 | 19 | 0 | 136 | 192 | 45 | 101 | 1.52e-18 | 85.9 |
Msa0182020 | MtrunA17_Chr4g0017851 | 58.333 | 60 | 25 | 0 | 137 | 196 | 118 | 177 | 1.71e-18 | 85.1 |
Msa0182020 | MtrunA17_Chr1g0184031 | 53.947 | 76 | 34 | 1 | 118 | 192 | 65 | 140 | 1.79e-18 | 83.2 |
Msa0182020 | MtrunA17_Chr1g0150661 | 31.034 | 174 | 108 | 4 | 101 | 267 | 2 | 170 | 1.79e-18 | 83.2 |
Msa0182020 | MtrunA17_Chr7g0265851 | 52.564 | 78 | 36 | 1 | 116 | 193 | 4 | 80 | 1.94e-18 | 82.8 |
Msa0182020 | MtrunA17_Chr1g0150671 | 45.652 | 92 | 49 | 1 | 108 | 199 | 17 | 107 | 2.08e-18 | 84.3 |
Msa0182020 | MtrunA17_Chr7g0252381 | 66.667 | 57 | 19 | 0 | 136 | 192 | 41 | 97 | 2.55e-18 | 84.0 |
Msa0182020 | MtrunA17_Chr6g0461271 | 54.286 | 70 | 32 | 0 | 132 | 201 | 28 | 97 | 3.16e-18 | 84.3 |
Msa0182020 | MtrunA17_Chr8g0346741 | 53.030 | 66 | 31 | 0 | 131 | 196 | 33 | 98 | 3.64e-18 | 81.3 |
Msa0182020 | MtrunA17_Chr5g0437671 | 62.712 | 59 | 22 | 0 | 136 | 194 | 84 | 142 | 4.29e-18 | 84.7 |
Msa0182020 | MtrunA17_Chr1g0150631 | 42.857 | 98 | 50 | 2 | 102 | 199 | 8 | 99 | 5.02e-18 | 82.0 |
Msa0182020 | MtrunA17_Chr2g0286161 | 36.000 | 150 | 72 | 5 | 126 | 261 | 31 | 170 | 6.28e-18 | 83.2 |
Msa0182020 | MtrunA17_Chr1g0186681 | 63.333 | 60 | 20 | 1 | 136 | 193 | 18 | 77 | 6.68e-18 | 79.3 |
Msa0182020 | MtrunA17_Chr1g0150691 | 47.436 | 78 | 40 | 1 | 122 | 199 | 7 | 83 | 6.92e-18 | 81.6 |
Msa0182020 | MtrunA17_Chr1g0183961 | 68.750 | 64 | 19 | 1 | 136 | 198 | 26 | 89 | 8.74e-18 | 79.3 |
Msa0182020 | MtrunA17_Chr1g0184061 | 61.667 | 60 | 22 | 1 | 134 | 192 | 74 | 133 | 1.42e-17 | 80.5 |
Msa0182020 | MtrunA17_Chr1g0189941 | 44.048 | 84 | 40 | 1 | 137 | 220 | 24 | 100 | 1.44e-17 | 79.3 |
Msa0182020 | MtrunA17_Chr6g0473881 | 40.517 | 116 | 59 | 3 | 103 | 212 | 72 | 183 | 1.62e-17 | 82.0 |
Msa0182020 | MtrunA17_Chr2g0301191 | 38.182 | 110 | 58 | 3 | 137 | 240 | 19 | 124 | 2.46e-17 | 79.7 |
Msa0182020 | MtrunA17_Chr1g0184071 | 55.263 | 76 | 32 | 2 | 118 | 192 | 51 | 125 | 3.80e-17 | 78.2 |
Msa0182020 | MtrunA17_Chr1g0203861 | 55.882 | 68 | 25 | 1 | 137 | 199 | 44 | 111 | 5.18e-17 | 78.6 |
Msa0182020 | MtrunA17_Chr2g0301171 | 38.596 | 114 | 57 | 3 | 125 | 232 | 4 | 110 | 5.78e-17 | 78.6 |
Msa0182020 | MtrunA17_Chr1g0170471 | 49.541 | 109 | 49 | 3 | 90 | 193 | 33 | 140 | 5.99e-17 | 77.8 |
Msa0182020 | MtrunA17_Chr6g0473941 | 58.333 | 60 | 25 | 0 | 137 | 196 | 33 | 92 | 7.24e-17 | 78.6 |
Msa0182020 | MtrunA17_Chr6g0486711 | 48.182 | 110 | 39 | 3 | 122 | 215 | 18 | 125 | 7.81e-17 | 79.0 |
Msa0182020 | MtrunA17_Chr6g0473961 | 49.367 | 79 | 38 | 1 | 137 | 215 | 54 | 130 | 9.58e-17 | 78.2 |
Msa0182020 | MtrunA17_Chr6g0473781 | 40.367 | 109 | 57 | 2 | 113 | 215 | 27 | 133 | 9.88e-17 | 78.6 |
Msa0182020 | MtrunA17_Chr4g0062551 | 57.627 | 59 | 25 | 0 | 135 | 193 | 51 | 109 | 1.01e-16 | 76.3 |
Msa0182020 | MtrunA17_Chr4g0062161 | 56.667 | 60 | 26 | 0 | 134 | 193 | 50 | 109 | 1.30e-16 | 77.4 |
Msa0182020 | MtrunA17_Chr4g0042761 | 45.161 | 93 | 32 | 3 | 134 | 225 | 45 | 119 | 1.38e-16 | 79.7 |
Msa0182020 | MtrunA17_Chr6g0473981 | 48.101 | 79 | 39 | 1 | 137 | 215 | 54 | 130 | 1.77e-16 | 78.2 |
Msa0182020 | MtrunA17_Chr6g0473931 | 58.621 | 58 | 24 | 0 | 137 | 194 | 33 | 90 | 1.87e-16 | 77.0 |
Msa0182020 | MtrunA17_Chr5g0396191 | 54.321 | 81 | 35 | 2 | 137 | 217 | 11 | 89 | 2.18e-16 | 76.6 |
Msa0182020 | MtrunA17_Chr6g0473861 | 53.521 | 71 | 28 | 1 | 137 | 202 | 63 | 133 | 2.52e-16 | 78.2 |
Msa0182020 | MtrunA17_Chr7g0261201 | 50.000 | 94 | 45 | 2 | 105 | 196 | 65 | 158 | 4.33e-16 | 77.0 |
Msa0182020 | MtrunA17_Chr3g0136551 | 37.755 | 98 | 50 | 2 | 135 | 232 | 63 | 149 | 6.04e-16 | 77.0 |
Msa0182020 | MtrunA17_Chr1g0200931 | 53.125 | 64 | 29 | 1 | 130 | 192 | 16 | 79 | 6.67e-16 | 73.9 |
Msa0182020 | MtrunA17_Chr6g0473971 | 55.000 | 60 | 27 | 0 | 137 | 196 | 54 | 113 | 9.16e-16 | 75.9 |
Msa0182020 | MtrunA17_Chr1g0183931 | 68.750 | 64 | 19 | 1 | 134 | 196 | 98 | 161 | 9.22e-16 | 76.3 |
Msa0182020 | MtrunA17_Chr8g0345531 | 62.500 | 48 | 18 | 0 | 136 | 183 | 115 | 162 | 1.25e-15 | 77.4 |
Msa0182020 | MtrunA17_Chr6g0473771 | 48.684 | 76 | 37 | 1 | 137 | 212 | 43 | 116 | 1.35e-15 | 72.4 |
Msa0182020 | MtrunA17_Chr1g0155751 | 65.517 | 58 | 20 | 0 | 137 | 194 | 39 | 96 | 1.62e-15 | 75.9 |
Msa0182020 | MtrunA17_Chr2g0301181 | 50.820 | 61 | 30 | 0 | 137 | 197 | 19 | 79 | 1.67e-15 | 75.1 |
Msa0182020 | MtrunA17_Chr7g0261171 | 64.706 | 68 | 23 | 1 | 130 | 196 | 78 | 145 | 1.68e-15 | 75.1 |
Msa0182020 | MtrunA17_Chr6g0474001 | 46.835 | 79 | 40 | 1 | 137 | 215 | 54 | 130 | 2.82e-15 | 75.1 |
Msa0182020 | MtrunA17_Chr3g0142081 | 67.241 | 58 | 19 | 0 | 137 | 194 | 39 | 96 | 3.22e-15 | 74.3 |
Msa0182020 | MtrunA17_Chr7g0225131 | 43.333 | 90 | 47 | 2 | 110 | 199 | 2 | 87 | 3.55e-15 | 70.5 |
Msa0182020 | MtrunA17_Chr1g0149331 | 47.748 | 111 | 51 | 4 | 133 | 239 | 3 | 110 | 3.75e-15 | 73.2 |
Msa0182020 | MtrunA17_Chr3g0083501 | 58.824 | 51 | 21 | 0 | 144 | 194 | 2 | 52 | 3.87e-15 | 69.7 |
Msa0182020 | MtrunA17_Chr8g0345551 | 62.963 | 54 | 16 | 1 | 134 | 183 | 110 | 163 | 4.58e-15 | 75.5 |
Msa0182020 | MtrunA17_Chr1g0209891 | 52.459 | 61 | 25 | 1 | 136 | 192 | 53 | 113 | 7.85e-15 | 74.3 |
Msa0182020 | MtrunA17_Chr7g0243431 | 58.730 | 63 | 19 | 1 | 137 | 192 | 78 | 140 | 8.17e-15 | 75.5 |
Msa0182020 | MtrunA17_Chr1g0205961 | 43.750 | 80 | 41 | 1 | 136 | 211 | 114 | 193 | 1.01e-14 | 74.7 |
Msa0182020 | MtrunA17_Chr5g0396171 | 50.000 | 58 | 29 | 0 | 139 | 196 | 26 | 83 | 1.44e-14 | 68.9 |
Msa0182020 | MtrunA17_Chr1g0146191 | 66.667 | 57 | 19 | 0 | 137 | 193 | 47 | 103 | 1.47e-14 | 72.8 |
Msa0182020 | MtrunA17_Chr4g0057241 | 46.914 | 81 | 40 | 2 | 132 | 212 | 10 | 87 | 1.74e-14 | 70.9 |
Msa0182020 | MtrunA17_Chr5g0438841 | 56.897 | 58 | 25 | 0 | 136 | 193 | 15 | 72 | 1.75e-14 | 70.9 |
Msa0182020 | MtrunA17_Chr1g0167781 | 47.573 | 103 | 48 | 3 | 95 | 192 | 37 | 138 | 2.33e-14 | 71.6 |
Msa0182020 | MtrunA17_Chr3g0136541 | 38.298 | 94 | 47 | 2 | 139 | 232 | 42 | 124 | 4.15e-14 | 71.2 |
Msa0182020 | MtrunA17_Chr3g0137831 | 66.102 | 59 | 20 | 0 | 135 | 193 | 6 | 64 | 1.07e-13 | 69.3 |
Msa0182020 | MtrunA17_Chr1g0186741 | 61.538 | 65 | 24 | 1 | 133 | 196 | 69 | 133 | 4.90e-13 | 67.8 |
Msa0182020 | MtrunA17_Chr5g0396301 | 50.000 | 62 | 29 | 1 | 135 | 194 | 16 | 77 | 5.65e-13 | 66.2 |
Msa0182020 | MtrunA17_Chr6g0473791 | 40.506 | 79 | 41 | 1 | 113 | 185 | 27 | 105 | 7.03e-13 | 65.5 |
Msa0182020 | MtrunA17_Chr2g0321071 | 43.617 | 94 | 38 | 4 | 133 | 211 | 43 | 136 | 7.08e-13 | 67.4 |
Msa0182020 | MtrunA17_Chr5g0423811 | 68.293 | 41 | 13 | 0 | 136 | 176 | 87 | 127 | 1.31e-12 | 67.8 |
Msa0182020 | MtrunA17_Chr5g0396741 | 55.000 | 80 | 36 | 0 | 133 | 212 | 113 | 192 | 1.94e-12 | 67.4 |
Msa0182020 | MtrunA17_Chr5g0398091 | 33.613 | 119 | 64 | 3 | 137 | 242 | 54 | 170 | 3.87e-12 | 65.5 |
Msa0182020 | MtrunA17_Chr5g0398061 | 33.613 | 119 | 64 | 3 | 137 | 242 | 49 | 165 | 5.34e-12 | 64.7 |
Msa0182020 | MtrunA17_Chr5g0396181 | 43.210 | 81 | 44 | 1 | 137 | 217 | 21 | 99 | 6.58e-12 | 63.9 |
Msa0182020 | MtrunA17_Chr5g0398081 | 42.353 | 85 | 41 | 2 | 137 | 215 | 49 | 131 | 8.42e-12 | 64.3 |
Msa0182020 | MtrunA17_Chr1g0198661 | 55.357 | 56 | 23 | 1 | 136 | 191 | 63 | 116 | 1.36e-11 | 65.1 |
Msa0182020 | MtrunA17_Chr4g0002771 | 47.059 | 102 | 48 | 3 | 101 | 202 | 45 | 140 | 1.95e-11 | 62.8 |
Msa0182020 | MtrunA17_Chr5g0422501 | 35.000 | 120 | 70 | 2 | 80 | 193 | 44 | 161 | 3.61e-11 | 63.9 |
Msa0182020 | MtrunA17_Chr5g0424051 | 52.308 | 65 | 30 | 1 | 130 | 193 | 89 | 153 | 3.74e-11 | 63.2 |
Msa0182020 | MtrunA17_Chr3g0114761 | 44.444 | 81 | 43 | 1 | 134 | 212 | 22 | 102 | 3.87e-11 | 62.4 |
Msa0182020 | MtrunA17_Chr4g0057231 | 46.835 | 79 | 37 | 3 | 137 | 212 | 44 | 120 | 8.76e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182020 | AT5G61890.1 | 51.333 | 150 | 55 | 3 | 98 | 242 | 51 | 187 | 1.89e-36 | 132 |
Msa0182020 | AT2G33710.1 | 70.130 | 77 | 23 | 0 | 120 | 196 | 53 | 129 | 4.00e-33 | 123 |
Msa0182020 | AT2G33710.2 | 70.130 | 77 | 23 | 0 | 120 | 196 | 53 | 129 | 5.81e-33 | 123 |
Msa0182020 | AT5G13330.1 | 71.951 | 82 | 18 | 1 | 133 | 214 | 35 | 111 | 1.08e-32 | 121 |
Msa0182020 | AT5G50080.2 | 52.703 | 148 | 49 | 3 | 128 | 275 | 77 | 203 | 2.03e-30 | 116 |
Msa0182020 | AT5G50080.1 | 51.282 | 156 | 55 | 3 | 120 | 275 | 60 | 194 | 2.11e-30 | 115 |
Msa0182020 | AT2G47520.1 | 47.244 | 127 | 58 | 3 | 124 | 241 | 35 | 161 | 9.23e-30 | 112 |
Msa0182020 | AT1G43160.1 | 62.037 | 108 | 35 | 1 | 132 | 233 | 56 | 163 | 9.11e-29 | 110 |
Msa0182020 | AT3G16770.1 | 60.465 | 86 | 31 | 1 | 112 | 194 | 51 | 136 | 1.87e-28 | 111 |
Msa0182020 | AT5G64750.1 | 86.207 | 58 | 8 | 0 | 144 | 201 | 192 | 249 | 2.47e-28 | 114 |
Msa0182020 | AT5G07310.1 | 62.857 | 105 | 27 | 3 | 133 | 231 | 88 | 186 | 1.59e-27 | 109 |
Msa0182020 | AT3G15210.1 | 50.000 | 118 | 45 | 3 | 123 | 226 | 11 | 128 | 8.01e-27 | 106 |
Msa0182020 | AT5G47220.1 | 68.919 | 74 | 22 | 1 | 129 | 201 | 109 | 182 | 4.26e-25 | 102 |
Msa0182020 | AT1G72360.1 | 66.667 | 66 | 22 | 0 | 136 | 201 | 24 | 89 | 5.84e-25 | 101 |
Msa0182020 | AT4G17500.1 | 56.989 | 93 | 39 | 1 | 110 | 201 | 121 | 213 | 8.63e-25 | 102 |
Msa0182020 | AT1G72360.2 | 66.667 | 66 | 22 | 0 | 136 | 201 | 75 | 140 | 9.30e-25 | 102 |
Msa0182020 | AT1G72360.3 | 66.667 | 66 | 22 | 0 | 136 | 201 | 73 | 138 | 1.04e-24 | 101 |
Msa0182020 | AT5G47230.1 | 61.628 | 86 | 28 | 2 | 121 | 201 | 136 | 221 | 1.04e-24 | 102 |
Msa0182020 | AT1G03800.1 | 58.750 | 80 | 29 | 1 | 114 | 193 | 34 | 109 | 2.67e-24 | 100 |
Msa0182020 | AT4G11140.1 | 60.759 | 79 | 30 | 1 | 135 | 213 | 85 | 162 | 3.71e-24 | 100 |
Msa0182020 | AT1G28370.2 | 64.384 | 73 | 22 | 1 | 121 | 193 | 46 | 114 | 3.87e-24 | 98.6 |
Msa0182020 | AT1G28370.1 | 64.384 | 73 | 22 | 1 | 121 | 193 | 8 | 76 | 5.80e-24 | 97.1 |
Msa0182020 | AT2G22200.1 | 55.000 | 80 | 36 | 0 | 130 | 209 | 64 | 143 | 3.01e-23 | 97.8 |
Msa0182020 | AT4G27950.1 | 35.593 | 177 | 92 | 5 | 33 | 192 | 2 | 173 | 4.09e-23 | 99.0 |
Msa0182020 | AT5G44210.1 | 73.684 | 57 | 15 | 0 | 137 | 193 | 33 | 89 | 4.21e-23 | 95.9 |
Msa0182020 | AT1G71450.1 | 55.556 | 81 | 34 | 2 | 137 | 217 | 24 | 102 | 1.02e-22 | 94.4 |
Msa0182020 | AT4G17490.1 | 67.164 | 67 | 21 | 1 | 131 | 196 | 131 | 197 | 1.28e-22 | 96.3 |
Msa0182020 | AT5G51190.1 | 68.852 | 61 | 18 | 1 | 134 | 193 | 69 | 129 | 1.54e-22 | 94.7 |
Msa0182020 | AT5G53290.1 | 52.632 | 95 | 43 | 1 | 100 | 192 | 86 | 180 | 2.15e-22 | 97.1 |
Msa0182020 | AT3G20310.1 | 48.571 | 105 | 40 | 2 | 136 | 236 | 26 | 120 | 2.55e-22 | 94.7 |
Msa0182020 | AT5G61600.1 | 62.319 | 69 | 25 | 1 | 135 | 202 | 86 | 154 | 2.88e-22 | 94.7 |
Msa0182020 | AT2G44840.1 | 69.355 | 62 | 18 | 1 | 136 | 196 | 91 | 152 | 4.90e-22 | 93.6 |
Msa0182020 | AT5G07580.1 | 48.598 | 107 | 49 | 3 | 112 | 217 | 88 | 189 | 5.43e-22 | 92.8 |
Msa0182020 | AT3G57600.1 | 63.235 | 68 | 25 | 0 | 136 | 203 | 27 | 94 | 8.01e-22 | 94.0 |
Msa0182020 | AT4G06746.1 | 61.290 | 62 | 24 | 0 | 135 | 196 | 34 | 95 | 8.90e-22 | 90.9 |
Msa0182020 | AT4G28140.1 | 41.964 | 112 | 64 | 1 | 135 | 246 | 141 | 251 | 1.04e-21 | 94.0 |
Msa0182020 | AT3G23230.1 | 72.881 | 59 | 15 | 1 | 136 | 193 | 19 | 77 | 1.27e-21 | 90.1 |
Msa0182020 | AT5G65130.1 | 64.516 | 62 | 22 | 0 | 135 | 196 | 109 | 170 | 1.28e-21 | 93.6 |
Msa0182020 | AT3G61630.1 | 46.667 | 105 | 51 | 2 | 88 | 192 | 61 | 160 | 1.32e-21 | 94.4 |
Msa0182020 | AT5G65130.2 | 64.516 | 62 | 22 | 0 | 135 | 196 | 111 | 172 | 1.32e-21 | 93.6 |
Msa0182020 | AT1G50640.1 | 72.414 | 58 | 16 | 0 | 136 | 193 | 27 | 84 | 1.54e-21 | 92.0 |
Msa0182020 | AT1G15360.1 | 65.574 | 61 | 21 | 0 | 135 | 195 | 5 | 65 | 1.71e-21 | 91.3 |
Msa0182020 | AT1G15360.2 | 65.574 | 61 | 21 | 0 | 135 | 195 | 5 | 65 | 1.71e-21 | 91.3 |
Msa0182020 | AT4G16750.1 | 45.833 | 96 | 52 | 0 | 99 | 194 | 2 | 97 | 1.74e-21 | 90.9 |
Msa0182020 | AT1G22190.1 | 65.000 | 60 | 21 | 0 | 135 | 194 | 81 | 140 | 2.28e-21 | 92.4 |
Msa0182020 | AT4G36900.1 | 48.387 | 93 | 40 | 1 | 102 | 194 | 3 | 87 | 2.84e-21 | 90.5 |
Msa0182020 | AT5G25190.1 | 53.659 | 82 | 37 | 1 | 136 | 217 | 7 | 87 | 4.08e-21 | 89.7 |
Msa0182020 | AT1G36060.1 | 66.102 | 59 | 20 | 0 | 135 | 193 | 141 | 199 | 6.61e-21 | 92.4 |
Msa0182020 | AT3G50260.1 | 57.353 | 68 | 29 | 0 | 132 | 199 | 16 | 83 | 6.72e-21 | 88.6 |
Msa0182020 | AT1G28360.1 | 65.625 | 64 | 22 | 0 | 130 | 193 | 5 | 68 | 6.87e-21 | 89.4 |
Msa0182020 | AT4G23750.2 | 55.952 | 84 | 31 | 2 | 109 | 192 | 100 | 177 | 7.16e-21 | 92.8 |
Msa0182020 | AT4G23750.1 | 55.952 | 84 | 31 | 2 | 109 | 192 | 100 | 177 | 7.16e-21 | 92.8 |
Msa0182020 | AT4G39780.1 | 63.934 | 61 | 22 | 0 | 134 | 194 | 90 | 150 | 8.60e-21 | 91.3 |
Msa0182020 | AT5G43410.1 | 71.186 | 59 | 16 | 1 | 136 | 193 | 14 | 72 | 1.35e-20 | 87.0 |
Msa0182020 | AT1G78080.1 | 66.102 | 59 | 20 | 0 | 135 | 193 | 150 | 208 | 1.36e-20 | 91.7 |
Msa0182020 | AT4G32800.1 | 53.333 | 75 | 33 | 1 | 122 | 194 | 2 | 76 | 1.57e-20 | 89.4 |
Msa0182020 | AT5G67190.1 | 56.338 | 71 | 31 | 0 | 130 | 200 | 14 | 84 | 1.70e-20 | 88.2 |
Msa0182020 | AT2G35700.1 | 65.517 | 58 | 20 | 0 | 137 | 194 | 45 | 102 | 1.91e-20 | 88.2 |
Msa0182020 | AT4G13620.1 | 68.333 | 60 | 19 | 0 | 135 | 194 | 230 | 289 | 2.15e-20 | 91.7 |
Msa0182020 | AT2G20880.1 | 65.000 | 60 | 21 | 0 | 135 | 194 | 185 | 244 | 2.84e-20 | 90.9 |
Msa0182020 | AT3G60490.1 | 50.000 | 84 | 30 | 1 | 123 | 194 | 45 | 128 | 2.92e-20 | 89.4 |
Msa0182020 | AT4G34410.1 | 84.211 | 57 | 9 | 0 | 137 | 193 | 136 | 192 | 3.01e-20 | 89.7 |
Msa0182020 | AT5G25810.1 | 47.826 | 92 | 47 | 1 | 103 | 194 | 3 | 93 | 3.65e-20 | 88.2 |
Msa0182020 | AT2G31230.1 | 53.012 | 83 | 37 | 2 | 116 | 196 | 64 | 146 | 5.60e-20 | 88.2 |
Msa0182020 | AT2G25820.1 | 65.517 | 58 | 20 | 0 | 137 | 194 | 26 | 83 | 6.03e-20 | 87.8 |
Msa0182020 | AT3G16280.1 | 65.517 | 58 | 20 | 0 | 137 | 194 | 61 | 118 | 7.03e-20 | 87.8 |
Msa0182020 | AT5G11590.1 | 50.000 | 92 | 43 | 2 | 103 | 194 | 20 | 108 | 8.16e-20 | 87.8 |
Msa0182020 | AT3G16280.2 | 65.517 | 58 | 20 | 0 | 137 | 194 | 79 | 136 | 8.76e-20 | 87.8 |
Msa0182020 | AT2G46310.1 | 66.667 | 57 | 19 | 0 | 136 | 192 | 98 | 154 | 9.30e-20 | 88.6 |
Msa0182020 | AT1G19210.1 | 54.688 | 64 | 29 | 0 | 136 | 199 | 11 | 74 | 9.55e-20 | 86.3 |
Msa0182020 | AT5G25390.2 | 62.712 | 59 | 22 | 0 | 135 | 193 | 5 | 63 | 1.10e-19 | 86.3 |
Msa0182020 | AT2G23340.1 | 62.069 | 58 | 22 | 0 | 137 | 194 | 28 | 85 | 1.76e-19 | 85.1 |
Msa0182020 | AT1G01250.1 | 43.750 | 96 | 48 | 1 | 101 | 196 | 15 | 104 | 1.76e-19 | 85.5 |
Msa0182020 | AT5G19790.1 | 52.564 | 78 | 33 | 1 | 124 | 197 | 5 | 82 | 1.76e-19 | 87.0 |
Msa0182020 | AT4G25470.1 | 51.899 | 79 | 36 | 1 | 137 | 215 | 51 | 127 | 1.86e-19 | 86.3 |
Msa0182020 | AT2G44940.1 | 59.375 | 64 | 26 | 0 | 131 | 194 | 94 | 157 | 2.03e-19 | 87.8 |
Msa0182020 | AT1G12980.1 | 57.692 | 78 | 31 | 1 | 136 | 211 | 56 | 133 | 2.42e-19 | 88.2 |
Msa0182020 | AT1G75490.1 | 49.412 | 85 | 35 | 2 | 137 | 221 | 42 | 118 | 2.82e-19 | 85.5 |
Msa0182020 | AT3G11020.1 | 65.000 | 60 | 21 | 0 | 137 | 196 | 78 | 137 | 3.86e-19 | 87.4 |
Msa0182020 | AT4G25490.1 | 53.947 | 76 | 33 | 1 | 137 | 212 | 48 | 121 | 3.94e-19 | 85.1 |
Msa0182020 | AT3G14230.2 | 41.892 | 148 | 80 | 2 | 72 | 213 | 58 | 205 | 4.12e-19 | 87.8 |
Msa0182020 | AT5G13910.1 | 52.778 | 72 | 34 | 0 | 121 | 192 | 4 | 75 | 5.69e-19 | 84.7 |
Msa0182020 | AT1G46768.1 | 59.016 | 61 | 25 | 0 | 134 | 194 | 28 | 88 | 6.02e-19 | 83.2 |
Msa0182020 | AT1G46768.2 | 59.016 | 61 | 25 | 0 | 134 | 194 | 28 | 88 | 6.02e-19 | 83.2 |
Msa0182020 | AT4G25480.1 | 52.632 | 76 | 34 | 1 | 137 | 212 | 51 | 124 | 6.17e-19 | 84.7 |
Msa0182020 | AT1G46768.3 | 59.016 | 61 | 25 | 0 | 134 | 194 | 28 | 88 | 7.23e-19 | 82.4 |
Msa0182020 | AT1G74930.1 | 53.125 | 64 | 30 | 0 | 136 | 199 | 20 | 83 | 1.03e-18 | 83.6 |
Msa0182020 | AT2G40340.2 | 53.247 | 77 | 36 | 0 | 137 | 213 | 14 | 90 | 1.54e-18 | 85.1 |
Msa0182020 | AT2G40340.5 | 53.247 | 77 | 36 | 0 | 137 | 213 | 14 | 90 | 1.54e-18 | 85.1 |
Msa0182020 | AT2G40340.4 | 53.247 | 77 | 36 | 0 | 137 | 213 | 14 | 90 | 1.54e-18 | 85.1 |
Msa0182020 | AT4G18450.1 | 64.516 | 62 | 20 | 2 | 133 | 192 | 106 | 167 | 1.59e-18 | 85.5 |
Msa0182020 | AT3G23240.1 | 68.421 | 57 | 17 | 1 | 137 | 192 | 82 | 138 | 2.16e-18 | 83.2 |
Msa0182020 | AT1G21910.1 | 59.649 | 57 | 23 | 0 | 137 | 193 | 50 | 106 | 2.74e-18 | 83.2 |
Msa0182020 | AT5G51990.1 | 44.144 | 111 | 50 | 3 | 115 | 215 | 22 | 130 | 3.43e-18 | 82.8 |
Msa0182020 | AT3G14230.3 | 48.673 | 113 | 53 | 1 | 106 | 213 | 92 | 204 | 3.45e-18 | 85.1 |
Msa0182020 | AT3G14230.1 | 52.941 | 102 | 43 | 1 | 117 | 213 | 108 | 209 | 3.80e-18 | 85.1 |
Msa0182020 | AT2G36450.1 | 52.381 | 84 | 35 | 2 | 128 | 210 | 6 | 85 | 3.97e-18 | 81.6 |
Msa0182020 | AT1G24590.1 | 66.667 | 57 | 19 | 0 | 136 | 192 | 57 | 113 | 4.00e-18 | 84.3 |
Msa0182020 | AT5G18450.1 | 62.500 | 56 | 21 | 0 | 137 | 192 | 34 | 89 | 4.01e-18 | 84.3 |
Msa0182020 | AT1G53910.1 | 55.882 | 102 | 40 | 3 | 128 | 224 | 114 | 215 | 4.13e-18 | 84.7 |
Msa0182020 | AT1G53910.2 | 55.882 | 102 | 40 | 3 | 128 | 224 | 114 | 215 | 4.13e-18 | 84.7 |
Msa0182020 | AT1G53910.3 | 55.882 | 102 | 40 | 3 | 128 | 224 | 112 | 213 | 4.26e-18 | 84.7 |
Msa0182020 | AT5G21960.1 | 42.553 | 94 | 51 | 1 | 136 | 226 | 6 | 99 | 4.55e-18 | 82.4 |
Msa0182020 | AT5G05410.2 | 63.333 | 60 | 22 | 0 | 134 | 193 | 76 | 135 | 4.71e-18 | 84.0 |
Msa0182020 | AT2G40340.6 | 53.247 | 77 | 36 | 0 | 137 | 213 | 79 | 155 | 5.17e-18 | 84.3 |
Msa0182020 | AT2G40340.3 | 53.247 | 77 | 36 | 0 | 137 | 213 | 72 | 148 | 5.38e-18 | 83.6 |
Msa0182020 | AT2G40340.1 | 53.247 | 77 | 36 | 0 | 137 | 213 | 72 | 148 | 6.19e-18 | 84.3 |
Msa0182020 | AT5G05410.1 | 63.333 | 60 | 22 | 0 | 134 | 193 | 76 | 135 | 6.30e-18 | 84.0 |
Msa0182020 | AT5G18560.1 | 50.575 | 87 | 34 | 1 | 115 | 192 | 24 | 110 | 7.22e-18 | 84.0 |
Msa0182020 | AT1G53170.1 | 50.980 | 102 | 46 | 1 | 125 | 226 | 19 | 116 | 7.85e-18 | 80.9 |
Msa0182020 | AT5G25390.1 | 61.017 | 59 | 20 | 1 | 135 | 193 | 5 | 60 | 1.27e-17 | 80.5 |
Msa0182020 | AT4G31060.1 | 36.923 | 130 | 64 | 5 | 135 | 246 | 25 | 154 | 9.36e-17 | 77.8 |
Msa0182020 | AT1G68550.1 | 47.312 | 93 | 40 | 2 | 134 | 226 | 110 | 193 | 9.38e-17 | 80.5 |
Msa0182020 | AT1G68550.2 | 47.312 | 93 | 40 | 2 | 134 | 226 | 110 | 193 | 9.38e-17 | 80.5 |
Msa0182020 | AT1G22985.1 | 54.054 | 74 | 31 | 1 | 122 | 192 | 60 | 133 | 3.02e-16 | 75.9 |
Msa0182020 | AT1G28160.1 | 61.404 | 57 | 22 | 0 | 136 | 192 | 38 | 94 | 3.03e-16 | 77.8 |
Msa0182020 | AT1G12890.1 | 51.316 | 76 | 35 | 1 | 127 | 200 | 11 | 86 | 5.25e-16 | 76.6 |
Msa0182020 | AT5G61590.1 | 58.442 | 77 | 29 | 2 | 120 | 193 | 88 | 164 | 9.84e-16 | 75.5 |
Msa0182020 | AT2G40350.2 | 57.895 | 57 | 24 | 0 | 137 | 193 | 74 | 130 | 1.32e-15 | 74.3 |
Msa0182020 | AT2G40350.1 | 57.895 | 57 | 24 | 0 | 137 | 193 | 67 | 123 | 1.51e-15 | 73.9 |
Msa0182020 | AT5G67000.1 | 53.333 | 60 | 28 | 0 | 132 | 191 | 116 | 175 | 1.57e-15 | 74.3 |
Msa0182020 | AT1G71130.1 | 53.623 | 69 | 27 | 1 | 129 | 192 | 71 | 139 | 2.53e-15 | 73.2 |
Msa0182020 | AT3G23220.1 | 72.881 | 59 | 15 | 1 | 136 | 193 | 13 | 71 | 4.07e-15 | 72.0 |
Msa0182020 | AT1G77200.1 | 65.517 | 58 | 20 | 0 | 137 | 194 | 43 | 100 | 4.10e-15 | 74.7 |
Msa0182020 | AT5G11190.1 | 69.492 | 59 | 18 | 0 | 135 | 193 | 5 | 63 | 7.24e-15 | 72.8 |
Msa0182020 | AT1G22810.1 | 43.333 | 90 | 46 | 2 | 128 | 215 | 5 | 91 | 7.36e-15 | 71.6 |
Msa0182020 | AT1G06160.1 | 68.852 | 61 | 18 | 1 | 137 | 196 | 82 | 142 | 1.36e-14 | 73.2 |
Msa0182020 | AT1G63030.2 | 48.684 | 76 | 37 | 1 | 137 | 212 | 30 | 103 | 1.41e-14 | 71.6 |
Msa0182020 | AT1G63030.1 | 48.684 | 76 | 37 | 1 | 137 | 212 | 30 | 103 | 1.41e-14 | 71.6 |
Msa0182020 | AT1G33760.1 | 57.333 | 75 | 28 | 1 | 137 | 211 | 20 | 90 | 2.10e-14 | 71.2 |
Msa0182020 | AT1G04370.1 | 71.186 | 59 | 16 | 1 | 136 | 193 | 19 | 77 | 2.93e-14 | 69.3 |
Msa0182020 | AT2G40220.1 | 67.797 | 59 | 19 | 0 | 134 | 192 | 52 | 110 | 4.65e-14 | 72.8 |
Msa0182020 | AT2G38340.1 | 56.164 | 73 | 24 | 2 | 136 | 200 | 69 | 141 | 1.19e-13 | 70.5 |
Msa0182020 | AT1G12610.1 | 51.724 | 58 | 28 | 0 | 137 | 194 | 30 | 87 | 2.69e-13 | 68.6 |
Msa0182020 | AT1G77640.1 | 46.429 | 84 | 44 | 1 | 133 | 216 | 39 | 121 | 9.28e-13 | 67.8 |
Msa0182020 | AT1G64380.1 | 64.516 | 62 | 22 | 0 | 132 | 193 | 131 | 192 | 9.40e-13 | 68.9 |
Msa0182020 | AT1G49120.1 | 32.787 | 122 | 77 | 3 | 115 | 232 | 63 | 183 | 2.12e-12 | 67.8 |
Msa0182020 | AT3G25890.1 | 35.714 | 112 | 49 | 2 | 90 | 183 | 71 | 177 | 4.43e-12 | 67.0 |
Msa0182020 | AT3G25890.2 | 35.714 | 112 | 49 | 2 | 90 | 183 | 71 | 177 | 4.43e-12 | 67.0 |
Msa0182020 | AT1G71520.1 | 53.846 | 52 | 23 | 1 | 129 | 179 | 5 | 56 | 6.92e-12 | 63.2 |
Msa0182020 | AT1G68840.2 | 54.386 | 57 | 24 | 1 | 136 | 192 | 64 | 118 | 1.46e-11 | 65.5 |
Msa0182020 | AT1G68840.1 | 54.386 | 57 | 24 | 1 | 136 | 192 | 64 | 118 | 1.46e-11 | 65.5 |
Msa0182020 | AT3G25730.1 | 35.789 | 95 | 59 | 1 | 136 | 230 | 61 | 153 | 2.29e-11 | 64.7 |
Msa0182020 | AT1G44830.1 | 57.143 | 63 | 26 | 1 | 133 | 194 | 31 | 93 | 2.65e-11 | 62.8 |
Msa0182020 | AT1G12630.1 | 54.412 | 68 | 28 | 2 | 131 | 196 | 11 | 77 | 9.74e-11 | 60.8 |
Find 112 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGACTTGGACCCACTCATTT+TGG | 0.138004 | 1_4:+70438084 | None:intergenic |
TTCTTCTAGTGCTGCTCTTT+TGG | 0.154366 | 1_4:-70437985 | Msa0182020:CDS |
TGATATGTTGGTGGCAAAAT+TGG | 0.225605 | 1_4:+70438596 | None:intergenic |
GTTTCACTTCCCCTGTTTCC+TGG | 0.257031 | 1_4:-70436356 | Msa0182020:CDS |
CACCTTCTTCTAGTTGATAA+TGG | 0.262245 | 1_4:-70436214 | Msa0182020:exon |
ACCATGTTGAAGGTGGAAAA+TGG | 0.277816 | 1_4:+70436267 | None:intergenic |
GACAGAGACCATGGGGAAAA+TGG | 0.284163 | 1_4:-70436850 | Msa0182020:CDS |
TGGAGAAAGAAAGAGATAAA+AGG | 0.305124 | 1_4:+70438679 | None:intergenic |
ACAAATAGATATATGTAAAA+AGG | 0.305556 | 1_4:+70438505 | None:intergenic |
GGAAAAGTTGGTCTTGTTGC+TGG | 0.317802 | 1_4:+70436683 | None:intergenic |
GAGAAAGAGGAAGAAGCTTC+AGG | 0.338432 | 1_4:-70438197 | Msa0182020:five_prime_UTR |
CCATTTGCTGACCAGGAAAC+AGG | 0.347326 | 1_4:+70436345 | None:intergenic |
GATTTGGAGTTCATTGAATT+CGG | 0.352817 | 1_4:-70436052 | Msa0182020:three_prime_UTR |
CACACAAAGCAGCAAGAGTA+TGG | 0.363163 | 1_4:-70436808 | Msa0182020:CDS |
GATGAGTTTCCCTGTGAAAA+AGG | 0.372591 | 1_4:+70437849 | None:intergenic |
GAAAATAACCACTTCCTTGT+TGG | 0.377793 | 1_4:+70438063 | None:intergenic |
CCTGTTTCCTGGTCAGCAAA+TGG | 0.381899 | 1_4:-70436345 | Msa0182020:CDS |
AGCGCCGACTCAGCATGGAT+TGG | 0.393202 | 1_4:-70438114 | Msa0182020:CDS |
AACCACTTCCTTGTTGGACT+TGG | 0.393801 | 1_4:+70438069 | None:intergenic |
GGTTTCTTGTTCTAAAATAG+TGG | 0.397627 | 1_4:+70438659 | None:intergenic |
GGCTGCATTTGTGGTGGTGC+AGG | 0.397775 | 1_4:+70436614 | None:intergenic |
GAAGAAGGTGGAGGAGGAGG+AGG | 0.399412 | 1_4:+70436227 | None:intergenic |
TCTCAGCTTCTGAAAGGTTC+CGG | 0.413668 | 1_4:-70436527 | Msa0182020:CDS |
GGGACAAAACCTGACATCAT+AGG | 0.430327 | 1_4:+70438041 | None:intergenic |
GCGCCGACTCAGCATGGATT+GGG | 0.436462 | 1_4:-70438113 | Msa0182020:CDS |
TCACAGGGAAACTCATCATC+AGG | 0.441888 | 1_4:-70437843 | Msa0182020:intron |
CCTTCAACATGGTCAGATAC+TGG | 0.444384 | 1_4:-70436257 | Msa0182020:CDS |
GTATCTTCTTCTTCTCTCTC+CGG | 0.445049 | 1_4:+70436883 | None:intergenic |
GCATATCAAAAGCATAGTTA+AGG | 0.451571 | 1_4:-70438320 | Msa0182020:five_prime_UTR |
CTAGAAGAAGGTGGAGGAGG+AGG | 0.459277 | 1_4:+70436224 | None:intergenic |
GTGGCGCAGCAAAGGGATAC+AGG | 0.459775 | 1_4:-70438260 | Msa0182020:five_prime_UTR |
ACAGAGACCATGGGGAAAAT+GGG | 0.460862 | 1_4:-70436849 | Msa0182020:CDS |
GGTGGCAATGTCTTGTCCTA+TGG | 0.461540 | 1_4:-70438141 | Msa0182020:exon |
TGTTGTTGTGGCTGCATTTG+TGG | 0.461629 | 1_4:+70436605 | None:intergenic |
CCACCGCGAGAGTGATCTTC+CGG | 0.461779 | 1_4:+70436308 | None:intergenic |
GCAGGTGAATAATGTGTTGC+TGG | 0.469601 | 1_4:+70436632 | None:intergenic |
GACTCAGCATGGATTGGGCC+AGG | 0.471357 | 1_4:-70438108 | Msa0182020:CDS |
TTGGGGTCTAGTTCATGGGT+TGG | 0.474786 | 1_4:-70437966 | Msa0182020:CDS |
GGATTGAACCAACAGCAGTA+TGG | 0.476328 | 1_4:-70438167 | Msa0182020:five_prime_UTR |
CAACTAGAAGAAGGTGGAGG+AGG | 0.477472 | 1_4:+70436221 | None:intergenic |
ACATGGTGGTGATGAGAAAG+AGG | 0.478118 | 1_4:-70438210 | Msa0182020:five_prime_UTR |
CCACCTCTCCATACTGCTGT+TGG | 0.480222 | 1_4:+70438159 | None:intergenic |
GAAGTATTCGCCGGAAAAGT+TGG | 0.481650 | 1_4:+70436671 | None:intergenic |
CACAAAAGAGTGCGTGAAGA+TGG | 0.482942 | 1_4:-70437942 | Msa0182020:CDS |
TTCAAGTCCTTGAAAATCAC+CGG | 0.484498 | 1_4:+70436508 | None:intergenic |
GAGCTTTGAAACTGAACAAA+CGG | 0.494758 | 1_4:+70436581 | None:intergenic |
GTGCAAATCTTTACTGATGT+CGG | 0.497022 | 1_4:+70438638 | None:intergenic |
AGGAAAGTTCGCGAGGTTGA+AGG | 0.499699 | 1_4:-70438240 | Msa0182020:five_prime_UTR |
CAGAATTCAAAAGAAATTCG+AGG | 0.502572 | 1_4:-70438358 | Msa0182020:five_prime_UTR |
CGCGGTGGAGGATACAGTGG+TGG | 0.508961 | 1_4:-70436293 | Msa0182020:CDS |
CATAATGATGATGCTGTTGG+TGG | 0.514955 | 1_4:-70437915 | Msa0182020:CDS |
CCAGTATCTGACCATGTTGA+AGG | 0.518722 | 1_4:+70436257 | None:intergenic |
GAATTAGAACTAGAAGAGAC+AGG | 0.519069 | 1_4:+70438020 | None:intergenic |
ACAACAAATGAAGAAGAAAC+CGG | 0.524400 | 1_4:-70436902 | Msa0182020:CDS |
GAAGATCACTCTCGCGGTGG+AGG | 0.525037 | 1_4:-70436305 | Msa0182020:CDS |
CATACTCTTGCTGCTTTGTG+TGG | 0.530957 | 1_4:+70436809 | None:intergenic |
AGAAAGAGGAAGAAGCTTCA+GGG | 0.531837 | 1_4:-70438196 | Msa0182020:five_prime_UTR |
TTCCATTATCAACTAGAAGA+AGG | 0.532961 | 1_4:+70436212 | None:intergenic |
CCATGTTGAAGGTGGAAAAT+GGG | 0.537545 | 1_4:+70436268 | None:intergenic |
ATGGTTCTACGAATCACAAA+TGG | 0.539406 | 1_4:-70436483 | Msa0182020:CDS |
TGAAACAGAGGATAATTGAC+TGG | 0.543402 | 1_4:+70436373 | None:intergenic |
ACATCAGTAAAGATTTGCAC+AGG | 0.545704 | 1_4:-70438635 | Msa0182020:five_prime_UTR |
TGAACAAACGGTTGTTGTTG+TGG | 0.546090 | 1_4:+70436593 | None:intergenic |
CATTTGCTGACCAGGAAACA+GGG | 0.547205 | 1_4:+70436346 | None:intergenic |
CAAACTGAAAATTGATATGT+TGG | 0.547278 | 1_4:+70438584 | None:intergenic |
GAGAGTGATCTTCCGGTGGC+CGG | 0.551531 | 1_4:+70436315 | None:intergenic |
TGGCCCAATCCATGCTGAGT+CGG | 0.555533 | 1_4:+70438110 | None:intergenic |
ACAGAGGATAATTGACTGGA+AGG | 0.556441 | 1_4:+70436377 | None:intergenic |
GTTCGCGAGGTTGAAGGAGG+AGG | 0.559370 | 1_4:-70438234 | Msa0182020:five_prime_UTR |
GAGGAGTGAGACAGAGACCA+TGG | 0.562124 | 1_4:-70436859 | Msa0182020:CDS |
CAATATTCTCAGCTTCTGAA+AGG | 0.563770 | 1_4:-70436533 | Msa0182020:CDS |
AGGAGTGAGACAGAGACCAT+GGG | 0.567176 | 1_4:-70436858 | Msa0182020:CDS |
GAAGAAGCTTCAGGGTCACA+TGG | 0.567739 | 1_4:-70438188 | Msa0182020:five_prime_UTR |
GAGAGAAGAAGAAGATACAG+AGG | 0.569683 | 1_4:-70436878 | Msa0182020:CDS |
GTCCAAGTCCAACAAGGAAG+TGG | 0.570055 | 1_4:-70438071 | Msa0182020:CDS |
CTTCATAATGATGATGCTGT+TGG | 0.570479 | 1_4:-70437918 | Msa0182020:CDS |
GCGGTGGAGGATACAGTGGT+GGG | 0.574526 | 1_4:-70436292 | Msa0182020:CDS |
ACTGAAAATTGATATGTTGG+TGG | 0.584144 | 1_4:+70438587 | None:intergenic |
AAAGCAGCAAGAGTATGGCT+TGG | 0.593615 | 1_4:-70436803 | Msa0182020:CDS |
GAAGATGTTGAAGTATTCGC+CGG | 0.597867 | 1_4:+70436662 | None:intergenic |
GTTTCAGCGCCGACTCAGCA+TGG | 0.598763 | 1_4:-70438119 | Msa0182020:CDS |
GACAAAGAAAGTGACGGAGA+AGG | 0.601613 | 1_4:+70436428 | None:intergenic |
TGGGCCAGGCCCAAAATGAG+TGG | 0.604705 | 1_4:-70438094 | Msa0182020:CDS |
TGAGTCGGCGCTGAAACCAT+AGG | 0.611832 | 1_4:+70438125 | None:intergenic |
TGTTGTGGCTGCATTTGTGG+TGG | 0.615280 | 1_4:+70436608 | None:intergenic |
GAAGATGACAAAGAAAGTGA+CGG | 0.618685 | 1_4:+70436422 | None:intergenic |
GAAGCTGCATTAAGATTCAG+AGG | 0.624554 | 1_4:-70436740 | Msa0182020:CDS |
CCAACAGCAGTATGGAGAGG+TGG | 0.632607 | 1_4:-70438159 | Msa0182020:five_prime_UTR |
AAAATTTGTAACATAGAGGG+TGG | 0.633363 | 1_4:-70438406 | Msa0182020:five_prime_UTR |
AAAGTTCGCGAGGTTGAAGG+AGG | 0.635043 | 1_4:-70438237 | Msa0182020:five_prime_UTR |
GTATCTGACCATGTTGAAGG+TGG | 0.635049 | 1_4:+70436260 | None:intergenic |
CATTATCAACTAGAAGAAGG+TGG | 0.636159 | 1_4:+70436215 | None:intergenic |
GGGCCAGGCCCAAAATGAGT+GGG | 0.638742 | 1_4:-70438093 | Msa0182020:CDS |
TATCAACTAGAAGAAGGTGG+AGG | 0.643850 | 1_4:+70436218 | None:intergenic |
CCGGAAGATCACTCTCGCGG+TGG | 0.644261 | 1_4:-70436308 | Msa0182020:CDS |
GAGTGGGTCCAAGTCCAACA+AGG | 0.647051 | 1_4:-70438077 | Msa0182020:CDS |
TTGAAGGAGGAGGAACATGG+TGG | 0.654636 | 1_4:-70438224 | Msa0182020:five_prime_UTR |
ATTTGCTGACCAGGAAACAG+GGG | 0.667657 | 1_4:+70436347 | None:intergenic |
CCGCGAGAGTGATCTTCCGG+TGG | 0.670643 | 1_4:+70436311 | None:intergenic |
TCTCGCGGTGGAGGATACAG+TGG | 0.671150 | 1_4:-70436296 | Msa0182020:CDS |
AATTAGAACTAGAAGAGACA+GGG | 0.674858 | 1_4:+70438021 | None:intergenic |
GGAGTGAGACAGAGACCATG+GGG | 0.677063 | 1_4:-70436857 | Msa0182020:CDS |
CCACCGGAAGATCACTCTCG+CGG | 0.679535 | 1_4:-70436311 | Msa0182020:CDS |
GGGATACAGGAAAGTTCGCG+AGG | 0.683932 | 1_4:-70438247 | Msa0182020:five_prime_UTR |
AGGTTGAAGGAGGAGGAACA+TGG | 0.684358 | 1_4:-70438227 | Msa0182020:five_prime_UTR |
GAACCAACAGCAGTATGGAG+AGG | 0.687774 | 1_4:-70438162 | Msa0182020:five_prime_UTR |
CATCAGTAAAGATTTGCACA+GGG | 0.691818 | 1_4:-70438634 | Msa0182020:five_prime_UTR |
GTTCTACGAATCACAAATGG+CGG | 0.709789 | 1_4:-70436480 | Msa0182020:CDS |
CAGTAAAGATTTGCACAGGG+TGG | 0.713306 | 1_4:-70438631 | Msa0182020:five_prime_UTR |
AAACAGGGGAAGTGAAACAG+AGG | 0.718203 | 1_4:+70436361 | None:intergenic |
TCAACATGGTCAGATACTGG+TGG | 0.724055 | 1_4:-70436254 | Msa0182020:CDS |
GCACTAGAAGAATACATACG+AGG | 0.768609 | 1_4:+70437996 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCTATTTTATTTGAAAAAA+CGG | - | chr1_4:70437768-70437787 | Msa0182020:intron | 10.0% |
!! | ACAAATAGATATATGTAAAA+AGG | + | chr1_4:70436253-70436272 | None:intergenic | 15.0% |
!!! | TTTTTTTCAACTTTTGTTTT+GGG | + | chr1_4:70436332-70436351 | None:intergenic | 15.0% |
!!! | TTTTTTTTCAACTTTTGTTT+TGG | + | chr1_4:70436333-70436352 | None:intergenic | 15.0% |
!! | AAAAAAAATTTGTAACATAG+AGG | - | chr1_4:70436345-70436364 | Msa0182020:CDS | 15.0% |
!! | AAAAAAATTTGTAACATAGA+GGG | - | chr1_4:70436346-70436365 | Msa0182020:CDS | 15.0% |
!! | TAAATAGAAAGAAAAAAAAG+TGG | - | chr1_4:70436476-70436495 | Msa0182020:CDS | 15.0% |
!! | AAAAGTTTAACAAAAAATGA+AGG | + | chr1_4:70437023-70437042 | None:intergenic | 15.0% |
!!! | ATTCAACTTGTTTTTTAATA+TGG | - | chr1_4:70437072-70437091 | Msa0182020:intron | 15.0% |
!!! | TTGTTTTTTAATATGGTAAA+TGG | - | chr1_4:70437079-70437098 | Msa0182020:intron | 15.0% |
!!! | AAAAAGTTTTTTTTTAGTGA+AGG | - | chr1_4:70437234-70437253 | Msa0182020:intron | 15.0% |
!!! | CATTTTAAGAAATTCAATAA+GGG | - | chr1_4:70437290-70437309 | Msa0182020:intron | 15.0% |
!!! | TTAATTGTTGGTTTATTAAA+AGG | + | chr1_4:70437327-70437346 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAGTCAAC+TGG | + | chr1_4:70437439-70437458 | None:intergenic | 15.0% |
!! | AAATAAAATAGAAGATCATA+AGG | + | chr1_4:70437761-70437780 | None:intergenic | 15.0% |
!!! | TTTTATTTTCTTCTTGATTT+TGG | - | chr1_4:70438678-70438697 | Msa0182020:five_prime_UTR | 15.0% |
!!! | GTCTCTTTTTGATAATTTTT+TGG | + | chr1_4:70436225-70436244 | None:intergenic | 20.0% |
!! | TGATTCTACAAAAATTACTA+AGG | + | chr1_4:70436288-70436307 | None:intergenic | 20.0% |
!!! | AAAACAAGTTGAATGAATTT+TGG | + | chr1_4:70437066-70437085 | None:intergenic | 20.0% |
!! | CCTTATTGAATTTCTTAAAA+TGG | + | chr1_4:70437292-70437311 | None:intergenic | 20.0% |
!!! | CCATTTTAAGAAATTCAATA+AGG | - | chr1_4:70437289-70437308 | Msa0182020:intron | 20.0% |
!! | TATAGACAAATGTTAATTGT+TGG | + | chr1_4:70437339-70437358 | None:intergenic | 20.0% |
!! | ATTAACATTTGTCTATAGAA+AGG | - | chr1_4:70437342-70437361 | Msa0182020:intron | 20.0% |
!! | TTAACATTTGTCTATAGAAA+GGG | - | chr1_4:70437343-70437362 | Msa0182020:intron | 20.0% |
!! | TAAAAGTGAAACTAAATAGT+CGG | - | chr1_4:70437541-70437560 | Msa0182020:intron | 20.0% |
!!! | AATAGTCTCTAAAACATTAT+TGG | - | chr1_4:70437686-70437705 | Msa0182020:intron | 20.0% |
! | CAAACTGAAAATTGATATGT+TGG | + | chr1_4:70436174-70436193 | None:intergenic | 25.0% |
!!! | TTTTAGATTACCTTTTTCAC+AGG | - | chr1_4:70436896-70436915 | Msa0182020:CDS | 25.0% |
!!! | TTTAGATTACCTTTTTCACA+GGG | - | chr1_4:70436897-70436916 | Msa0182020:CDS | 25.0% |
! | ATTGTGTATGTAGATGTAAA+AGG | + | chr1_4:70436960-70436979 | None:intergenic | 25.0% |
! | TTTGGTCATGTGAAATTTAA+GGG | + | chr1_4:70437135-70437154 | None:intergenic | 25.0% |
!! | TTTTGGTCATGTGAAATTTA+AGG | + | chr1_4:70437136-70437155 | None:intergenic | 25.0% |
!! | GTACTTAGAATAACATGTTT+TGG | + | chr1_4:70437153-70437172 | None:intergenic | 25.0% |
! | TTAGTGAAGGATCAATAAAA+AGG | - | chr1_4:70437247-70437266 | Msa0182020:intron | 25.0% |
! | AAAAGGTTTAGTAGTTAACA+AGG | - | chr1_4:70437264-70437283 | Msa0182020:intron | 25.0% |
!! | ACATTAGATTTGGTTGATAT+AGG | + | chr1_4:70437384-70437403 | None:intergenic | 25.0% |
!! | TGAAATAGTTTTTCCAAGAT+GGG | + | chr1_4:70437481-70437500 | None:intergenic | 25.0% |
!! | TTGAAATAGTTTTTCCAAGA+TGG | + | chr1_4:70437482-70437501 | None:intergenic | 25.0% |
! | CTATTTCAACTTATATTGCA+TGG | - | chr1_4:70437493-70437512 | Msa0182020:intron | 25.0% |
! | GAACAATTTGAACTAAACAA+TGG | + | chr1_4:70437722-70437741 | None:intergenic | 25.0% |
! | AAGGAAACAGTGATCATTTT+TGG | + | chr1_4:70436060-70436079 | None:intergenic | 30.0% |
TGGAGAAAGAAAGAGATAAA+AGG | + | chr1_4:70436079-70436098 | None:intergenic | 30.0% | |
!! | GGTTTCTTGTTCTAAAATAG+TGG | + | chr1_4:70436099-70436118 | None:intergenic | 30.0% |
ACTGAAAATTGATATGTTGG+TGG | + | chr1_4:70436171-70436190 | None:intergenic | 30.0% | |
! | TTTTCAGTTTGAACGTATCT+AGG | - | chr1_4:70436183-70436202 | Msa0182020:three_prime_UTR | 30.0% |
AAAATTTGTAACATAGAGGG+TGG | - | chr1_4:70436349-70436368 | Msa0182020:CDS | 30.0% | |
CAGAATTCAAAAGAAATTCG+AGG | - | chr1_4:70436397-70436416 | Msa0182020:CDS | 30.0% | |
! | GCATATCAAAAGCATAGTTA+AGG | - | chr1_4:70436435-70436454 | Msa0182020:CDS | 30.0% |
AATTAGAACTAGAAGAGACA+GGG | + | chr1_4:70436737-70436756 | None:intergenic | 30.0% | |
TTGGTCATGTGAAATTTAAG+GGG | + | chr1_4:70437134-70437153 | None:intergenic | 30.0% | |
ACATATTATATTGCTCCTTC+TGG | + | chr1_4:70437187-70437206 | None:intergenic | 30.0% | |
GTACTTTGCAACATTAGATT+TGG | + | chr1_4:70437394-70437413 | None:intergenic | 30.0% | |
ACAACAAATGAAGAAGAAAC+CGG | - | chr1_4:70437853-70437872 | Msa0182020:CDS | 30.0% | |
!! | ATTTTCAAGGACTTGAACAA+TGG | - | chr1_4:70438253-70438272 | Msa0182020:five_prime_UTR | 30.0% |
TTCCATTATCAACTAGAAGA+AGG | + | chr1_4:70438546-70438565 | None:intergenic | 30.0% | |
! | CTTCTTGATTTTGGATGATT+TGG | - | chr1_4:70438687-70438706 | Msa0182020:five_prime_UTR | 30.0% |
! | GATTTGGAGTTCATTGAATT+CGG | - | chr1_4:70438703-70438722 | Msa0182020:five_prime_UTR | 30.0% |
GTGCAAATCTTTACTGATGT+CGG | + | chr1_4:70436120-70436139 | None:intergenic | 35.0% | |
ACATCAGTAAAGATTTGCAC+AGG | - | chr1_4:70436120-70436139 | Msa0182020:three_prime_UTR | 35.0% | |
CATCAGTAAAGATTTGCACA+GGG | - | chr1_4:70436121-70436140 | Msa0182020:three_prime_UTR | 35.0% | |
!! | TGATATGTTGGTGGCAAAAT+TGG | + | chr1_4:70436162-70436181 | None:intergenic | 35.0% |
GAAAATAACCACTTCCTTGT+TGG | + | chr1_4:70436695-70436714 | None:intergenic | 35.0% | |
!! | GGTTATTTTCCTATGATGTC+AGG | - | chr1_4:70436705-70436724 | Msa0182020:CDS | 35.0% |
GAATTAGAACTAGAAGAGAC+AGG | + | chr1_4:70436738-70436757 | None:intergenic | 35.0% | |
! | CTTCATAATGATGATGCTGT+TGG | - | chr1_4:70436837-70436856 | Msa0182020:CDS | 35.0% |
TTCAAATCTTGATCCCATCT+TGG | - | chr1_4:70437465-70437484 | Msa0182020:intron | 35.0% | |
TTGCTAATGCCGATATTGAT+AGG | - | chr1_4:70437578-70437597 | Msa0182020:intron | 35.0% | |
AGTGCTTAGCCTATCAATAT+CGG | + | chr1_4:70437590-70437609 | None:intergenic | 35.0% | |
ATAGGCTAAGCACTTTCATT+CGG | - | chr1_4:70437596-70437615 | Msa0182020:intron | 35.0% | |
! | TTGTTGCTGGAACATTTTCA+GGG | + | chr1_4:70438062-70438081 | None:intergenic | 35.0% |
!! | GAGCTTTGAAACTGAACAAA+CGG | + | chr1_4:70438177-70438196 | None:intergenic | 35.0% |
CAATATTCTCAGCTTCTGAA+AGG | - | chr1_4:70438222-70438241 | Msa0182020:five_prime_UTR | 35.0% | |
TTCAAGTCCTTGAAAATCAC+CGG | + | chr1_4:70438250-70438269 | None:intergenic | 35.0% | |
! | ATGGTTCTACGAATCACAAA+TGG | - | chr1_4:70438272-70438291 | Msa0182020:five_prime_UTR | 35.0% |
GAAGATGACAAAGAAAGTGA+CGG | + | chr1_4:70438336-70438355 | None:intergenic | 35.0% | |
TGAAACAGAGGATAATTGAC+TGG | + | chr1_4:70438385-70438404 | None:intergenic | 35.0% | |
CATTATCAACTAGAAGAAGG+TGG | + | chr1_4:70438543-70438562 | None:intergenic | 35.0% | |
!! | CACCTTCTTCTAGTTGATAA+TGG | - | chr1_4:70438541-70438560 | Msa0182020:five_prime_UTR | 35.0% |
AAAAAAAAGTGGCGCAGCAA+AGG | - | chr1_4:70436487-70436506 | Msa0182020:CDS | 40.0% | |
AAAAAAAGTGGCGCAGCAAA+GGG | - | chr1_4:70436488-70436507 | Msa0182020:CDS | 40.0% | |
AGAAAGAGGAAGAAGCTTCA+GGG | - | chr1_4:70436559-70436578 | Msa0182020:CDS | 40.0% | |
GCACTAGAAGAATACATACG+AGG | + | chr1_4:70436762-70436781 | None:intergenic | 40.0% | |
!! | TTCTTCTAGTGCTGCTCTTT+TGG | - | chr1_4:70436770-70436789 | Msa0182020:CDS | 40.0% |
!! | TCTTCTAGTGCTGCTCTTTT+GGG | - | chr1_4:70436771-70436790 | Msa0182020:CDS | 40.0% |
!!! | TCTTTTGGGGTCTAGTTCAT+GGG | - | chr1_4:70436785-70436804 | Msa0182020:CDS | 40.0% |
! | CATAATGATGATGCTGTTGG+TGG | - | chr1_4:70436840-70436859 | Msa0182020:CDS | 40.0% |
GATGAGTTTCCCTGTGAAAA+AGG | + | chr1_4:70436909-70436928 | None:intergenic | 40.0% | |
GTACAACACTAATGTCCAGA+AGG | - | chr1_4:70437169-70437188 | Msa0182020:intron | 40.0% | |
TATCGGCATTAGCAATCAAG+CGG | + | chr1_4:70437573-70437592 | None:intergenic | 40.0% | |
TAGGCTAAGCACTTTCATTC+GGG | - | chr1_4:70437597-70437616 | Msa0182020:intron | 40.0% | |
TCAAATCCAAAATCTCGCTG+TGG | - | chr1_4:70437621-70437640 | Msa0182020:intron | 40.0% | |
CAAATCCAAAATCTCGCTGT+GGG | - | chr1_4:70437622-70437641 | Msa0182020:intron | 40.0% | |
GTATCTTCTTCTTCTCTCTC+CGG | + | chr1_4:70437875-70437894 | None:intergenic | 40.0% | |
GAGAGAAGAAGAAGATACAG+AGG | - | chr1_4:70437877-70437896 | Msa0182020:CDS | 40.0% | |
GAAGCTGCATTAAGATTCAG+AGG | - | chr1_4:70438015-70438034 | Msa0182020:CDS | 40.0% | |
! | CTTGTTGCTGGAACATTTTC+AGG | + | chr1_4:70438063-70438082 | None:intergenic | 40.0% |
! | AGCAACAAGACCAACTTTTC+CGG | - | chr1_4:70438074-70438093 | Msa0182020:CDS | 40.0% |
! | GAAGATGTTGAAGTATTCGC+CGG | + | chr1_4:70438096-70438115 | None:intergenic | 40.0% |
! | TGAACAAACGGTTGTTGTTG+TGG | + | chr1_4:70438165-70438184 | None:intergenic | 40.0% |
! | AAAGGTTCCGGTGATTTTCA+AGG | - | chr1_4:70438240-70438259 | Msa0182020:five_prime_UTR | 40.0% |
GTTCTACGAATCACAAATGG+CGG | - | chr1_4:70438275-70438294 | Msa0182020:five_prime_UTR | 40.0% | |
ACAGAGGATAATTGACTGGA+AGG | + | chr1_4:70438381-70438400 | None:intergenic | 40.0% | |
! | AAAAACTCCATTTGCTGACC+AGG | + | chr1_4:70438420-70438439 | None:intergenic | 40.0% |
! | GTCAGCAAATGGAGTTTTTC+CGG | - | chr1_4:70438421-70438440 | Msa0182020:five_prime_UTR | 40.0% |
CCATGTTGAAGGTGGAAAAT+GGG | + | chr1_4:70438490-70438509 | None:intergenic | 40.0% | |
ACCATGTTGAAGGTGGAAAA+TGG | + | chr1_4:70438491-70438510 | None:intergenic | 40.0% | |
TATCAACTAGAAGAAGGTGG+AGG | + | chr1_4:70438540-70438559 | None:intergenic | 40.0% | |
CAGTAAAGATTTGCACAGGG+TGG | - | chr1_4:70436124-70436143 | Msa0182020:three_prime_UTR | 45.0% | |
! | ACATGGTGGTGATGAGAAAG+AGG | - | chr1_4:70436545-70436564 | Msa0182020:CDS | 45.0% |
GAGAAAGAGGAAGAAGCTTC+AGG | - | chr1_4:70436558-70436577 | Msa0182020:CDS | 45.0% | |
GGATTGAACCAACAGCAGTA+TGG | - | chr1_4:70436588-70436607 | Msa0182020:CDS | 45.0% | |
! | GACTTGGACCCACTCATTTT+GGG | + | chr1_4:70436673-70436692 | None:intergenic | 45.0% |
AACCACTTCCTTGTTGGACT+TGG | + | chr1_4:70436689-70436708 | None:intergenic | 45.0% | |
GGGACAAAACCTGACATCAT+AGG | + | chr1_4:70436717-70436736 | None:intergenic | 45.0% | |
!! | CTTCTAGTGCTGCTCTTTTG+GGG | - | chr1_4:70436772-70436791 | Msa0182020:CDS | 45.0% |
!!! | CTCTTTTGGGGTCTAGTTCA+TGG | - | chr1_4:70436784-70436803 | Msa0182020:CDS | 45.0% |
! | CACAAAAGAGTGCGTGAAGA+TGG | - | chr1_4:70436813-70436832 | Msa0182020:CDS | 45.0% |
TCACAGGGAAACTCATCATC+AGG | - | chr1_4:70436912-70436931 | Msa0182020:CDS | 45.0% | |
ACAGAGACCATGGGGAAAAT+GGG | - | chr1_4:70437906-70437925 | Msa0182020:CDS | 45.0% | |
!! | CATACTCTTGCTGCTTTGTG+TGG | + | chr1_4:70437949-70437968 | None:intergenic | 45.0% |
CACACAAAGCAGCAAGAGTA+TGG | - | chr1_4:70437947-70437966 | Msa0182020:CDS | 45.0% | |
! | AAAGCAGCAAGAGTATGGCT+TGG | - | chr1_4:70437952-70437971 | Msa0182020:CDS | 45.0% |
!! | GGAAAAGTTGGTCTTGTTGC+TGG | + | chr1_4:70438075-70438094 | None:intergenic | 45.0% |
! | GAAGTATTCGCCGGAAAAGT+TGG | + | chr1_4:70438087-70438106 | None:intergenic | 45.0% |
GCAGGTGAATAATGTGTTGC+TGG | + | chr1_4:70438126-70438145 | None:intergenic | 45.0% | |
TGTTGTTGTGGCTGCATTTG+TGG | + | chr1_4:70438153-70438172 | None:intergenic | 45.0% | |
! | TCTCAGCTTCTGAAAGGTTC+CGG | - | chr1_4:70438228-70438247 | Msa0182020:five_prime_UTR | 45.0% |
! | GACAAAGAAAGTGACGGAGA+AGG | + | chr1_4:70438330-70438349 | None:intergenic | 45.0% |
AAACAGGGGAAGTGAAACAG+AGG | + | chr1_4:70438397-70438416 | None:intergenic | 45.0% | |
! | ATTTGCTGACCAGGAAACAG+GGG | + | chr1_4:70438411-70438430 | None:intergenic | 45.0% |
! | CATTTGCTGACCAGGAAACA+GGG | + | chr1_4:70438412-70438431 | None:intergenic | 45.0% |
! | CCCATTTTCCACCTTCAACA+TGG | - | chr1_4:70438487-70438506 | Msa0182020:five_prime_UTR | 45.0% |
GTATCTGACCATGTTGAAGG+TGG | + | chr1_4:70438498-70438517 | None:intergenic | 45.0% | |
CCAGTATCTGACCATGTTGA+AGG | + | chr1_4:70438501-70438520 | None:intergenic | 45.0% | |
CCTTCAACATGGTCAGATAC+TGG | - | chr1_4:70438498-70438517 | Msa0182020:five_prime_UTR | 45.0% | |
TCAACATGGTCAGATACTGG+TGG | - | chr1_4:70438501-70438520 | Msa0182020:five_prime_UTR | 45.0% | |
AGGAAAGTTCGCGAGGTTGA+AGG | - | chr1_4:70436515-70436534 | Msa0182020:CDS | 50.0% | |
AAAGTTCGCGAGGTTGAAGG+AGG | - | chr1_4:70436518-70436537 | Msa0182020:CDS | 50.0% | |
AGGTTGAAGGAGGAGGAACA+TGG | - | chr1_4:70436528-70436547 | Msa0182020:CDS | 50.0% | |
TTGAAGGAGGAGGAACATGG+TGG | - | chr1_4:70436531-70436550 | Msa0182020:CDS | 50.0% | |
GAAGAAGCTTCAGGGTCACA+TGG | - | chr1_4:70436567-70436586 | Msa0182020:CDS | 50.0% | |
GAACCAACAGCAGTATGGAG+AGG | - | chr1_4:70436593-70436612 | Msa0182020:CDS | 50.0% | |
GGTGGCAATGTCTTGTCCTA+TGG | - | chr1_4:70436614-70436633 | Msa0182020:CDS | 50.0% | |
! | GGACTTGGACCCACTCATTT+TGG | + | chr1_4:70436674-70436693 | None:intergenic | 50.0% |
GTCCAAGTCCAACAAGGAAG+TGG | - | chr1_4:70436684-70436703 | Msa0182020:CDS | 50.0% | |
! | TTGGGGTCTAGTTCATGGGT+TGG | - | chr1_4:70436789-70436808 | Msa0182020:CDS | 50.0% |
AGGAGTGAGACAGAGACCAT+GGG | - | chr1_4:70437897-70437916 | Msa0182020:CDS | 50.0% | |
GACAGAGACCATGGGGAAAA+TGG | - | chr1_4:70437905-70437924 | Msa0182020:CDS | 50.0% | |
TGTTGTGGCTGCATTTGTGG+TGG | + | chr1_4:70438150-70438169 | None:intergenic | 50.0% | |
GTTTCACTTCCCCTGTTTCC+TGG | - | chr1_4:70438399-70438418 | Msa0182020:five_prime_UTR | 50.0% | |
! | CCATTTGCTGACCAGGAAAC+AGG | + | chr1_4:70438413-70438432 | None:intergenic | 50.0% |
CCTGTTTCCTGGTCAGCAAA+TGG | - | chr1_4:70438410-70438429 | Msa0182020:five_prime_UTR | 50.0% | |
! | AATGGAGTTTTTCCGGCCAC+CGG | - | chr1_4:70438428-70438447 | Msa0182020:five_prime_UTR | 50.0% |
CAACTAGAAGAAGGTGGAGG+AGG | + | chr1_4:70438537-70438556 | None:intergenic | 50.0% | |
GGGATACAGGAAAGTTCGCG+AGG | - | chr1_4:70436508-70436527 | Msa0182020:CDS | 55.0% | |
CCACCTCTCCATACTGCTGT+TGG | + | chr1_4:70436599-70436618 | None:intergenic | 55.0% | |
CCAACAGCAGTATGGAGAGG+TGG | - | chr1_4:70436596-70436615 | Msa0182020:CDS | 55.0% | |
! | TGAGTCGGCGCTGAAACCAT+AGG | + | chr1_4:70436633-70436652 | None:intergenic | 55.0% |
TGGCCCAATCCATGCTGAGT+CGG | + | chr1_4:70436648-70436667 | None:intergenic | 55.0% | |
GAGTGGGTCCAAGTCCAACA+AGG | - | chr1_4:70436678-70436697 | Msa0182020:CDS | 55.0% | |
! | GCTCACCCACAGCGAGATTT+TGG | + | chr1_4:70437630-70437649 | None:intergenic | 55.0% |
GAGGAGTGAGACAGAGACCA+TGG | - | chr1_4:70437896-70437915 | Msa0182020:CDS | 55.0% | |
GGAGTGAGACAGAGACCATG+GGG | - | chr1_4:70437898-70437917 | Msa0182020:CDS | 55.0% | |
! | TCTGCTGCCCATTTTCCCCA+TGG | + | chr1_4:70437916-70437935 | None:intergenic | 55.0% |
CTAGAAGAAGGTGGAGGAGG+AGG | + | chr1_4:70438534-70438553 | None:intergenic | 55.0% | |
GTGGCGCAGCAAAGGGATAC+AGG | - | chr1_4:70436495-70436514 | Msa0182020:CDS | 60.0% | |
GTTCGCGAGGTTGAAGGAGG+AGG | - | chr1_4:70436521-70436540 | Msa0182020:CDS | 60.0% | |
!! | GTTTCAGCGCCGACTCAGCA+TGG | - | chr1_4:70436636-70436655 | Msa0182020:CDS | 60.0% |
!! | AGCGCCGACTCAGCATGGAT+TGG | - | chr1_4:70436641-70436660 | Msa0182020:CDS | 60.0% |
!! | GCGCCGACTCAGCATGGATT+GGG | - | chr1_4:70436642-70436661 | Msa0182020:CDS | 60.0% |
!! | GACTCAGCATGGATTGGGCC+AGG | - | chr1_4:70436647-70436666 | Msa0182020:CDS | 60.0% |
TGGGCCAGGCCCAAAATGAG+TGG | - | chr1_4:70436661-70436680 | Msa0182020:CDS | 60.0% | |
GGGCCAGGCCCAAAATGAGT+GGG | - | chr1_4:70436662-70436681 | Msa0182020:CDS | 60.0% | |
! | GGACCCACTCATTTTGGGCC+TGG | + | chr1_4:70436668-70436687 | None:intergenic | 60.0% |
! | GGCTGCATTTGTGGTGGTGC+AGG | + | chr1_4:70438144-70438163 | None:intergenic | 60.0% |
GAGAGTGATCTTCCGGTGGC+CGG | + | chr1_4:70438443-70438462 | None:intergenic | 60.0% | |
CCACCGGAAGATCACTCTCG+CGG | - | chr1_4:70438444-70438463 | Msa0182020:five_prime_UTR | 60.0% | |
CCACCGCGAGAGTGATCTTC+CGG | + | chr1_4:70438450-70438469 | None:intergenic | 60.0% | |
GAAGATCACTCTCGCGGTGG+AGG | - | chr1_4:70438450-70438469 | Msa0182020:five_prime_UTR | 60.0% | |
TCTCGCGGTGGAGGATACAG+TGG | - | chr1_4:70438459-70438478 | Msa0182020:five_prime_UTR | 60.0% | |
GCGGTGGAGGATACAGTGGT+GGG | - | chr1_4:70438463-70438482 | Msa0182020:five_prime_UTR | 60.0% | |
GAAGAAGGTGGAGGAGGAGG+AGG | + | chr1_4:70438531-70438550 | None:intergenic | 60.0% | |
CCGCGAGAGTGATCTTCCGG+TGG | + | chr1_4:70438447-70438466 | None:intergenic | 65.0% | |
CCGGAAGATCACTCTCGCGG+TGG | - | chr1_4:70438447-70438466 | Msa0182020:five_prime_UTR | 65.0% | |
CGCGGTGGAGGATACAGTGG+TGG | - | chr1_4:70438462-70438481 | Msa0182020:five_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 70436051 | 70438726 | 70436051 | ID=Msa0182020;Name=Msa0182020 |
chr1_4 | mRNA | 70436051 | 70438726 | 70436051 | ID=Msa0182020-mRNA-1;Parent=Msa0182020;Name=Msa0182020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=570|1|1|1|1|1|2|169|357 |
chr1_4 | exon | 70436051 | 70436980 | 70436051 | ID=Msa0182020-mRNA-1:exon:23500;Parent=Msa0182020-mRNA-1 |
chr1_4 | exon | 70437844 | 70438726 | 70437844 | ID=Msa0182020-mRNA-1:exon:23499;Parent=Msa0182020-mRNA-1 |
chr1_4 | five_prime_UTR | 70438157 | 70438726 | 70438157 | ID=Msa0182020-mRNA-1:five_prime_utr;Parent=Msa0182020-mRNA-1 |
chr1_4 | CDS | 70437844 | 70438156 | 70437844 | ID=Msa0182020-mRNA-1:cds;Parent=Msa0182020-mRNA-1 |
chr1_4 | CDS | 70436220 | 70436980 | 70436220 | ID=Msa0182020-mRNA-1:cds;Parent=Msa0182020-mRNA-1 |
chr1_4 | three_prime_UTR | 70436051 | 70436219 | 70436051 | ID=Msa0182020-mRNA-1:three_prime_utr;Parent=Msa0182020-mRNA-1 |
Gene Sequence |
Protein sequence |