Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026080 | XP_003623546.1 | 97.642 | 212 | 5 | 0 | 1 | 212 | 1 | 212 | 1.97e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026080 | sp|Q9LZX1|LOR15_ARATH | 56.938 | 209 | 88 | 2 | 2 | 209 | 8 | 215 | 1.35e-92 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026080 | G7KW28 | 97.642 | 212 | 5 | 0 | 1 | 212 | 1 | 212 | 9.41e-155 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1026080 | -0.806377 | 8.474555e-50 | -8.615850e-47 |
| Msa0026420 | Msa1026080 | 0.829844 | 4.101634e-55 | -8.615850e-47 |
| Msa0027020 | Msa1026080 | -0.819176 | 1.332256e-52 | -8.615850e-47 |
| Msa0030800 | Msa1026080 | 0.801070 | 1.070848e-48 | -8.615850e-47 |
| Msa0039890 | Msa1026080 | 0.841108 | 5.802906e-58 | -8.615850e-47 |
| Msa0042520 | Msa1026080 | -0.836578 | 8.618594e-57 | -8.615850e-47 |
| Msa0051480 | Msa1026080 | 0.851752 | 7.231886e-61 | -8.615850e-47 |
| Msa0051620 | Msa1026080 | 0.811465 | 6.908637e-51 | -8.615850e-47 |
| Msa0051730 | Msa1026080 | 0.807175 | 5.746072e-50 | -8.615850e-47 |
| Msa0052780 | Msa1026080 | 0.819618 | 1.056576e-52 | -8.615850e-47 |
| Msa0074690 | Msa1026080 | 0.801591 | 8.375257e-49 | -8.615850e-47 |
| Msa0074860 | Msa1026080 | -0.803760 | 2.988668e-49 | -8.615850e-47 |
| Msa0076640 | Msa1026080 | 0.801571 | 8.457570e-49 | -8.615850e-47 |
| Msa0083890 | Msa1026080 | 0.810323 | 1.220421e-50 | -8.615850e-47 |
| Msa0087550 | Msa1026080 | 0.867646 | 1.173509e-65 | -8.615850e-47 |
| Msa0097570 | Msa1026080 | 0.818751 | 1.664130e-52 | -8.615850e-47 |
| Msa0099300 | Msa1026080 | -0.821914 | 3.133020e-53 | -8.615850e-47 |
| Msa0614290 | Msa1026080 | 0.807145 | 5.832787e-50 | -8.615850e-47 |
| Msa0631130 | Msa1026080 | 0.800254 | 1.570948e-48 | -8.615850e-47 |
| Msa0644610 | Msa1026080 | -0.801074 | 1.068753e-48 | -8.615850e-47 |
| Msa0645480 | Msa1026080 | 0.841498 | 4.581304e-58 | -8.615850e-47 |
| Msa0660650 | Msa1026080 | 0.824511 | 7.760117e-54 | -8.615850e-47 |
| Msa0662370 | Msa1026080 | -0.810102 | 1.362106e-50 | -8.615850e-47 |
| Msa0667670 | Msa1026080 | -0.816845 | 4.482709e-52 | -8.615850e-47 |
| Msa0690100 | Msa1026080 | -0.800103 | 1.686021e-48 | -8.615850e-47 |
| Msa0693750 | Msa1026080 | 0.808008 | 3.824867e-50 | -8.615850e-47 |
| Msa0695250 | Msa1026080 | -0.802693 | 4.971505e-49 | -8.615850e-47 |
| Msa0697510 | Msa1026080 | 0.803807 | 2.923278e-49 | -8.615850e-47 |
| Msa0704790 | Msa1026080 | -0.802795 | 4.734247e-49 | -8.615850e-47 |
| Msa0740630 | Msa1026080 | 0.837964 | 3.808811e-57 | -8.615850e-47 |
| Msa0744550 | Msa1026080 | 0.815856 | 7.461356e-52 | -8.615850e-47 |
| Msa0744560 | Msa1026080 | 0.819379 | 1.198152e-52 | -8.615850e-47 |
| Msa0746340 | Msa1026080 | 0.817018 | 4.099824e-52 | -8.615850e-47 |
| Msa0793270 | Msa1026080 | 0.807353 | 5.269954e-50 | -8.615850e-47 |
| Msa0795320 | Msa1026080 | 0.827164 | 1.819810e-54 | -8.615850e-47 |
| Msa0816630 | Msa1026080 | 0.823460 | 1.368530e-53 | -8.615850e-47 |
| Msa0820880 | Msa1026080 | 0.837526 | 4.935628e-57 | -8.615850e-47 |
| Msa0826360 | Msa1026080 | 0.804962 | 1.678844e-49 | -8.615850e-47 |
| Msa0826820 | Msa1026080 | -0.813395 | 2.615658e-51 | -8.615850e-47 |
| Msa0829210 | Msa1026080 | -0.804593 | 2.005017e-49 | -8.615850e-47 |
| Msa0127220 | Msa1026080 | -0.807551 | 4.782379e-50 | -8.615850e-47 |
| Msa0134270 | Msa1026080 | 0.862147 | 6.225625e-64 | -8.615850e-47 |
| Msa0143640 | Msa1026080 | 0.839372 | 1.648111e-57 | -8.615850e-47 |
| Msa0146200 | Msa1026080 | 0.855309 | 6.876546e-62 | -8.615850e-47 |
| Msa0147790 | Msa1026080 | 0.803692 | 3.087673e-49 | -8.615850e-47 |
| Msa0147960 | Msa1026080 | -0.800439 | 1.440848e-48 | -8.615850e-47 |
| Msa0167160 | Msa1026080 | -0.818838 | 1.590589e-52 | -8.615850e-47 |
| Msa0172310 | Msa1026080 | -0.820085 | 8.263911e-53 | -8.615850e-47 |
| Msa0180820 | Msa1026080 | 0.859886 | 3.033287e-63 | -8.615850e-47 |
| Msa0186240 | Msa1026080 | 0.807736 | 4.368504e-50 | -8.615850e-47 |
| Msa0224210 | Msa1026080 | 0.822600 | 2.172591e-53 | -8.615850e-47 |
| Msa0225080 | Msa1026080 | -0.800814 | 1.208196e-48 | -8.615850e-47 |
| Msa0232160 | Msa1026080 | -0.834129 | 3.583728e-56 | -8.615850e-47 |
| Msa0238710 | Msa1026080 | 0.807331 | 5.325788e-50 | -8.615850e-47 |
| Msa0368620 | Msa1026080 | 0.801605 | 8.320577e-49 | -8.615850e-47 |
| Msa0383900 | Msa1026080 | 0.801442 | 8.988809e-49 | -8.615850e-47 |
| Msa0389710 | Msa1026080 | 0.801969 | 7.005532e-49 | -8.615850e-47 |
| Msa0390790 | Msa1026080 | 0.819922 | 9.006590e-53 | -8.615850e-47 |
| Msa0402800 | Msa1026080 | 0.840238 | 9.806289e-58 | -8.615850e-47 |
| Msa0427310 | Msa1026080 | 0.806015 | 1.009721e-49 | -8.615850e-47 |
| Msa0427560 | Msa1026080 | 0.821145 | 4.716796e-53 | -8.615850e-47 |
| Msa0429840 | Msa1026080 | 0.812938 | 3.295891e-51 | -8.615850e-47 |
| Msa0432490 | Msa1026080 | -0.803069 | 4.157247e-49 | -8.615850e-47 |
| Msa0434300 | Msa1026080 | 0.805863 | 1.086920e-49 | -8.615850e-47 |
| Msa0434400 | Msa1026080 | 0.801673 | 8.056983e-49 | -8.615850e-47 |
| Msa0436430 | Msa1026080 | -0.813072 | 3.080124e-51 | -8.615850e-47 |
| Msa0438070 | Msa1026080 | 0.850676 | 1.455633e-60 | -8.615850e-47 |
| Msa0449620 | Msa1026080 | 0.813181 | 2.915287e-51 | -8.615850e-47 |
| Msa0473810 | Msa1026080 | 0.823682 | 1.214270e-53 | -8.615850e-47 |
| Msa0476890 | Msa1026080 | -0.801589 | 8.385196e-49 | -8.615850e-47 |
| Msa0480540 | Msa1026080 | 0.819792 | 9.641086e-53 | -8.615850e-47 |
| Msa0480550 | Msa1026080 | 0.822139 | 2.779511e-53 | -8.615850e-47 |
| Msa0481770 | Msa1026080 | 0.854512 | 1.172067e-61 | -8.615850e-47 |
| Msa0984290 | Msa1026080 | 0.819193 | 1.320383e-52 | -8.615850e-47 |
| Msa1001120 | Msa1026080 | 0.803576 | 3.263344e-49 | -8.615850e-47 |
| Msa1016960 | Msa1026080 | 0.812190 | 4.801278e-51 | -8.615850e-47 |
| Msa1026080 | Msa1030210 | 0.819498 | 1.125555e-52 | -8.615850e-47 |
| Msa1026080 | Msa1064240 | 0.822664 | 2.098325e-53 | -8.615850e-47 |
| Msa1026080 | Msa1069250 | 0.806048 | 9.939414e-50 | -8.615850e-47 |
| Msa1026080 | Msa1080820 | 0.801102 | 1.055116e-48 | -8.615850e-47 |
| Msa1026080 | Msa1082600 | 0.826859 | 2.152338e-54 | -8.615850e-47 |
| Msa1026080 | Msa1117770 | -0.803487 | 3.405882e-49 | -8.615850e-47 |
| Msa1026080 | Msa1118960 | 0.800630 | 1.316817e-48 | -8.615850e-47 |
| Msa1026080 | Msa1122930 | -0.806166 | 9.384414e-50 | -8.615850e-47 |
| Msa1026080 | Msa1127360 | 0.831632 | 1.495420e-55 | -8.615850e-47 |
| Msa1026080 | Msa1137750 | 0.806735 | 7.119489e-50 | -8.615850e-47 |
| Msa1026080 | Msa1154240 | 0.809991 | 1.438700e-50 | -8.615850e-47 |
| Msa1026080 | Msa1157110 | 0.806224 | 9.127007e-50 | -8.615850e-47 |
| Msa1026080 | Msa1157200 | 0.815641 | 8.331293e-52 | -8.615850e-47 |
| Msa1026080 | Msa1161550 | -0.800165 | 1.637952e-48 | -8.615850e-47 |
| Msa1026080 | Msa1165430 | 0.805220 | 1.482877e-49 | -8.615850e-47 |
| Msa1026080 | Msa1173150 | 0.819152 | 1.349446e-52 | -8.615850e-47 |
| Msa1026080 | Msa1174280 | 0.814781 | 1.293719e-51 | -8.615850e-47 |
| Msa1026080 | Msa1202110 | 0.804912 | 1.720270e-49 | -8.615850e-47 |
| Msa1026080 | Msa1211610 | 0.832239 | 1.058649e-55 | -8.615850e-47 |
| Msa1026080 | Msa1217260 | 0.852544 | 4.307228e-61 | -8.615850e-47 |
| Msa1026080 | Msa1220850 | 0.801412 | 9.116583e-49 | -8.615850e-47 |
| Msa1026080 | Msa1221220 | 0.808504 | 2.997858e-50 | -8.615850e-47 |
| Msa1026080 | Msa1223560 | 0.804459 | 2.138822e-49 | -8.615850e-47 |
| Msa1026080 | Msa1224510 | 0.814261 | 1.685706e-51 | -8.615850e-47 |
| Msa1026080 | Msa1228260 | -0.808829 | 2.555765e-50 | -8.615850e-47 |
| Msa1026080 | Msa1235960 | -0.806701 | 7.240127e-50 | -8.615850e-47 |
| Msa1026080 | Msa1235990 | -0.806095 | 9.715156e-50 | -8.615850e-47 |
| Msa1026080 | Msa1254870 | 0.806988 | 6.296340e-50 | -8.615850e-47 |
| Msa1026080 | Msa1262540 | 0.858157 | 9.991673e-63 | -8.615850e-47 |
| Msa1026080 | Msa1271220 | -0.810764 | 9.802287e-51 | -8.615850e-47 |
| Msa1026080 | Msa1299480 | 0.836871 | 7.259470e-57 | -8.615850e-47 |
| Msa1026080 | Msa1302340 | 0.805740 | 1.153757e-49 | -8.615850e-47 |
| Msa1026080 | Msa1308430 | -0.809082 | 2.255479e-50 | -8.615850e-47 |
| Msa1026080 | Msa1315880 | -0.803659 | 3.137193e-49 | -8.615850e-47 |
| Msa1026080 | Msa1316090 | -0.803231 | 3.846831e-49 | -8.615850e-47 |
| Msa1026080 | Msa1322180 | 0.815167 | 1.062014e-51 | -8.615850e-47 |
| Msa1026080 | Msa1328430 | 0.808121 | 3.617617e-50 | -8.615850e-47 |
| Msa1026080 | Msa1341850 | -0.807914 | 4.005277e-50 | -8.615850e-47 |
| Msa1026080 | Msa1349830 | 0.854152 | 1.488711e-61 | -8.615850e-47 |
| Msa1026080 | Msa1350590 | -0.813096 | 3.042120e-51 | -8.615850e-47 |
| Msa1026080 | Msa1358650 | 0.806174 | 9.350945e-50 | -8.615850e-47 |
| Msa1026080 | Msa1365420 | -0.804420 | 2.178701e-49 | -8.615850e-47 |
| Msa1026080 | Msa1371540 | -0.802135 | 6.475644e-49 | -8.615850e-47 |
| Msa1026080 | Msa1372460 | -0.831056 | 2.071696e-55 | -8.615850e-47 |
| Msa1026080 | Msa1372470 | -0.820214 | 7.720628e-53 | -8.615850e-47 |
| Msa1026080 | Msa1375980 | -0.807618 | 4.628126e-50 | -8.615850e-47 |
| Msa1026080 | Msa1377050 | 0.857321 | 1.767048e-62 | -8.615850e-47 |
| Msa1026080 | Msa1379930 | -0.817601 | 3.030817e-52 | -8.615850e-47 |
| Msa1026080 | Msa1386910 | -0.802265 | 6.089264e-49 | -8.615850e-47 |
| Msa1026080 | Msa1387610 | 0.807832 | 4.168589e-50 | -8.615850e-47 |
| Msa1026080 | Msa1398120 | 0.822439 | 2.367500e-53 | -8.615850e-47 |
| Msa1026080 | Msa1403820 | -0.806892 | 6.597693e-50 | -8.615850e-47 |
| Msa1026080 | Msa1408230 | -0.808016 | 3.809343e-50 | -8.615850e-47 |
| Msa1026080 | Msa1410480 | -0.801581 | 8.415231e-49 | -8.615850e-47 |
| Msa1026080 | Msa1410500 | -0.807723 | 4.397252e-50 | -8.615850e-47 |
| Msa1026080 | Msa1415510 | -0.801327 | 9.486641e-49 | -8.615850e-47 |
| Msa1026080 | Msa1434850 | -0.811686 | 6.182518e-51 | -8.615850e-47 |
| Msa1026080 | Msa1434860 | -0.835758 | 1.392643e-56 | -8.615850e-47 |
| Msa1026080 | Msa1449470 | 0.808663 | 2.772909e-50 | -8.615850e-47 |
| Msa1026080 | Msa1452800 | -0.806460 | 8.137736e-50 | -8.615850e-47 |
| Msa1026080 | Msa1453600 | 0.862413 | 5.158034e-64 | -8.615850e-47 |
| Msa1026080 | Msa1459920 | 0.821107 | 4.813934e-53 | -8.615850e-47 |
| Msa1026080 | Msa1459930 | 0.810723 | 1.000090e-50 | -8.615850e-47 |
| Msa1026080 | Msa1464020 | 0.802749 | 4.839427e-49 | -8.615850e-47 |
| Msa1026080 | Msa1465860 | 0.800937 | 1.139858e-48 | -8.615850e-47 |
| Msa0246140 | Msa1026080 | 0.829560 | 4.807785e-55 | -8.615850e-47 |
| Msa0254640 | Msa1026080 | 0.824955 | 6.095488e-54 | -8.615850e-47 |
| Msa0259770 | Msa1026080 | -0.802829 | 4.658516e-49 | -8.615850e-47 |
| Msa0265480 | Msa1026080 | 0.822402 | 2.414396e-53 | -8.615850e-47 |
| Msa0266150 | Msa1026080 | -0.802772 | 4.787356e-49 | -8.615850e-47 |
| Msa0267900 | Msa1026080 | 0.802369 | 5.798022e-49 | -8.615850e-47 |
| Msa0269710 | Msa1026080 | 0.800647 | 1.306832e-48 | -8.615850e-47 |
| Msa0284730 | Msa1026080 | 0.811915 | 5.513489e-51 | -8.615850e-47 |
| Msa0306310 | Msa1026080 | 0.801956 | 7.049080e-49 | -8.615850e-47 |
| Msa0310260 | Msa1026080 | -0.810881 | 9.243182e-51 | -8.615850e-47 |
| Msa0310270 | Msa1026080 | -0.835735 | 1.411715e-56 | -8.615850e-47 |
| Msa0316470 | Msa1026080 | 0.809403 | 1.925376e-50 | -8.615850e-47 |
| Msa0319680 | Msa1026080 | 0.847344 | 1.227547e-59 | -8.615850e-47 |
| Msa0340370 | Msa1026080 | 0.837222 | 5.904667e-57 | -8.615850e-47 |
| Msa0488580 | Msa1026080 | 0.800147 | 1.652066e-48 | -8.615850e-47 |
| Msa0497860 | Msa1026080 | 0.834581 | 2.760001e-56 | -8.615850e-47 |
| Msa0500580 | Msa1026080 | -0.802213 | 6.242042e-49 | -8.615850e-47 |
| Msa0500910 | Msa1026080 | 0.817588 | 3.050050e-52 | -8.615850e-47 |
| Msa0517990 | Msa1026080 | 0.806688 | 7.285895e-50 | -8.615850e-47 |
| Msa0518190 | Msa1026080 | 0.815776 | 7.774911e-52 | -8.615850e-47 |
| Msa0521260 | Msa1026080 | -0.808255 | 3.388281e-50 | -8.615850e-47 |
| Msa0522170 | Msa1026080 | 0.805157 | 1.528943e-49 | -8.615850e-47 |
| Msa0534610 | Msa1026080 | 0.808026 | 3.790388e-50 | -8.615850e-47 |
| Msa0547060 | Msa1026080 | 0.802477 | 5.507358e-49 | -8.615850e-47 |
| Msa0554700 | Msa1026080 | -0.807247 | 5.549879e-50 | -8.615850e-47 |
| Msa0560280 | Msa1026080 | 0.819213 | 1.306754e-52 | -8.615850e-47 |
| Msa0565180 | Msa1026080 | 0.807045 | 6.124096e-50 | -8.615850e-47 |
| Msa0572370 | Msa1026080 | -0.826704 | 2.343904e-54 | -8.615850e-47 |
| Msa0580840 | Msa1026080 | 0.835472 | 1.644873e-56 | -8.615850e-47 |
| Msa0580890 | Msa1026080 | -0.801280 | 9.700385e-49 | -8.615850e-47 |
| Msa0590810 | Msa1026080 | 0.804943 | 1.694527e-49 | -8.615850e-47 |
| Msa0859040 | Msa1026080 | 0.834315 | 3.217882e-56 | -8.615850e-47 |
| Msa0863940 | Msa1026080 | 0.824632 | 7.265459e-54 | -8.615850e-47 |
| Msa0865500 | Msa1026080 | -0.807663 | 4.529344e-50 | -8.615850e-47 |
| Msa0865810 | Msa1026080 | 0.803030 | 4.233535e-49 | -8.615850e-47 |
| Msa0865820 | Msa1026080 | 0.807560 | 4.762489e-50 | -8.615850e-47 |
| Msa0865830 | Msa1026080 | 0.825200 | 5.337110e-54 | -8.615850e-47 |
| Msa0867470 | Msa1026080 | 0.803777 | 2.964370e-49 | -8.615850e-47 |
| Msa0870120 | Msa1026080 | 0.833349 | 5.613262e-56 | -8.615850e-47 |
| Msa0876790 | Msa1026080 | 0.828102 | 1.083645e-54 | -8.615850e-47 |
| Msa0888520 | Msa1026080 | -0.802309 | 5.963227e-49 | -8.615850e-47 |
| Msa0929440 | Msa1026080 | -0.804249 | 2.365289e-49 | -8.615850e-47 |
| Msa0935830 | Msa1026080 | 0.829138 | 6.087535e-55 | -8.615850e-47 |
| Msa0958960 | Msa1026080 | -0.803128 | 4.041099e-49 | -8.615850e-47 |
| Msa0973000 | Msa1026080 | 0.824174 | 9.311253e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026080 | MtrunA17_Chr7g0244371 | 97.642 | 212 | 5 | 0 | 1 | 212 | 1 | 212 | 1.81e-158 | 436 |
| Msa1026080 | MtrunA17_Chr7g0244321 | 83.962 | 212 | 32 | 2 | 1 | 210 | 1 | 212 | 4.79e-132 | 369 |
| Msa1026080 | MtrunA17_Chr7g0244341 | 82.710 | 214 | 35 | 2 | 1 | 212 | 1 | 214 | 2.93e-131 | 368 |
| Msa1026080 | MtrunA17_Chr7g0244331 | 81.604 | 212 | 37 | 2 | 1 | 210 | 1 | 212 | 3.63e-127 | 357 |
| Msa1026080 | MtrunA17_Chr7g0244361 | 78.475 | 223 | 33 | 3 | 1 | 212 | 25 | 243 | 5.41e-122 | 345 |
| Msa1026080 | MtrunA17_Chr4g0013291 | 60.000 | 190 | 71 | 2 | 19 | 207 | 12 | 197 | 2.20e-81 | 241 |
| Msa1026080 | MtrunA17_Chr7g0244111 | 80.833 | 120 | 23 | 0 | 88 | 207 | 2 | 121 | 4.65e-73 | 217 |
| Msa1026080 | MtrunA17_Chr1g0150081 | 55.026 | 189 | 75 | 5 | 18 | 201 | 1 | 184 | 9.77e-64 | 196 |
| Msa1026080 | MtrunA17_Chr2g0333101 | 32.738 | 168 | 105 | 5 | 45 | 208 | 42 | 205 | 1.58e-25 | 99.0 |
| Msa1026080 | MtrunA17_Chr5g0432221 | 33.889 | 180 | 104 | 6 | 32 | 201 | 37 | 211 | 3.37e-24 | 95.5 |
| Msa1026080 | MtrunA17_Chr4g0003271 | 27.895 | 190 | 130 | 6 | 22 | 207 | 7 | 193 | 5.92e-23 | 92.0 |
| Msa1026080 | MtrunA17_Chr2g0333111 | 28.079 | 203 | 137 | 6 | 10 | 207 | 7 | 205 | 3.45e-20 | 85.1 |
| Msa1026080 | MtrunA17_Chr1g0150091 | 42.857 | 126 | 51 | 4 | 92 | 201 | 10 | 130 | 5.48e-20 | 82.0 |
| Msa1026080 | MtrunA17_Chr1g0150101 | 54.430 | 79 | 32 | 2 | 123 | 201 | 4 | 78 | 1.74e-19 | 79.3 |
| Msa1026080 | MtrunA17_Chr8g0387561 | 27.670 | 206 | 124 | 10 | 19 | 204 | 31 | 231 | 3.79e-15 | 71.6 |
| Msa1026080 | MtrunA17_Chr8g0345091 | 26.667 | 165 | 116 | 4 | 38 | 199 | 28 | 190 | 9.88e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026080 | AT5G01750.2 | 56.938 | 209 | 88 | 2 | 2 | 209 | 8 | 215 | 1.37e-93 | 273 |
| Msa1026080 | AT3G11740.1 | 61.290 | 186 | 70 | 2 | 22 | 205 | 3 | 188 | 3.15e-84 | 248 |
| Msa1026080 | AT2G14560.1 | 51.596 | 188 | 90 | 1 | 19 | 205 | 4 | 191 | 9.60e-72 | 217 |
| Msa1026080 | AT1G33840.1 | 50.490 | 204 | 99 | 2 | 3 | 205 | 9 | 211 | 3.72e-71 | 216 |
| Msa1026080 | AT2G14560.3 | 51.596 | 188 | 90 | 1 | 19 | 205 | 64 | 251 | 1.49e-70 | 216 |
| Msa1026080 | AT5G01750.1 | 55.422 | 166 | 72 | 2 | 2 | 166 | 8 | 172 | 6.54e-70 | 211 |
| Msa1026080 | AT2G14560.2 | 49.333 | 150 | 75 | 1 | 19 | 167 | 4 | 153 | 1.71e-55 | 175 |
| Msa1026080 | AT2G14560.4 | 49.333 | 150 | 75 | 1 | 19 | 167 | 64 | 213 | 2.80e-54 | 174 |
| Msa1026080 | AT1G33840.2 | 47.590 | 166 | 85 | 2 | 3 | 167 | 9 | 173 | 6.64e-53 | 168 |
| Msa1026080 | AT3G16900.1 | 40.909 | 198 | 93 | 5 | 9 | 205 | 6 | 180 | 4.66e-49 | 158 |
| Msa1026080 | AT3G56180.2 | 35.052 | 194 | 116 | 4 | 21 | 210 | 17 | 204 | 7.05e-37 | 128 |
| Msa1026080 | AT3G56180.1 | 34.536 | 194 | 115 | 5 | 21 | 210 | 17 | 202 | 1.19e-34 | 122 |
| Msa1026080 | AT3G10986.1 | 33.503 | 197 | 120 | 5 | 21 | 210 | 3 | 195 | 1.84e-32 | 116 |
| Msa1026080 | AT3G15810.1 | 30.303 | 165 | 109 | 3 | 45 | 207 | 44 | 204 | 9.16e-25 | 97.4 |
| Msa1026080 | AT1G80120.1 | 33.333 | 168 | 103 | 4 | 45 | 207 | 30 | 193 | 2.38e-19 | 82.8 |
| Msa1026080 | AT2G38640.1 | 30.052 | 193 | 125 | 6 | 16 | 204 | 6 | 192 | 2.77e-18 | 79.7 |
| Msa1026080 | AT2G30270.1 | 29.444 | 180 | 112 | 7 | 25 | 201 | 12 | 179 | 4.81e-16 | 73.6 |
| Msa1026080 | AT2G05910.1 | 23.350 | 197 | 131 | 8 | 21 | 208 | 3 | 188 | 1.72e-11 | 61.2 |
| Msa1026080 | AT5G20640.1 | 25.824 | 182 | 118 | 6 | 42 | 208 | 33 | 212 | 2.18e-11 | 61.2 |
| Msa1026080 | AT3G14260.1 | 24.664 | 223 | 138 | 7 | 3 | 205 | 15 | 227 | 3.45e-11 | 60.8 |
Find 54 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGTCTTAAATTGCATT+AGG | 0.261327 | 7_1:-57633908 | None:intergenic |
| GGAACTCGCGGTGGTGAAAA+AGG | 0.328185 | 7_1:+57632023 | Msa1026080:CDS |
| CCACTCCCCACCACCATAAT+AGG | 0.328414 | 7_1:+57631973 | Msa1026080:CDS |
| ACAATATTGAGGACCTATTA+TGG | 0.329253 | 7_1:-57631986 | None:intergenic |
| TTTGGTCTTAAATTGCATTA+GGG | 0.330409 | 7_1:-57633907 | None:intergenic |
| AAACATCGTCTTCAAAGTTA+AGG | 0.341780 | 7_1:+57632089 | Msa1026080:CDS |
| AGCAAGAAACACATCTAATT+TGG | 0.342809 | 7_1:-57633925 | None:intergenic |
| GTGGCATTAATCGTGATTCT+TGG | 0.373611 | 7_1:+57634261 | Msa1026080:CDS |
| CCTATTATGGTGGTGGGGAG+TGG | 0.386608 | 7_1:-57631973 | None:intergenic |
| GATAAACTGTGACCATAAAA+TGG | 0.388429 | 7_1:-57634215 | None:intergenic |
| TAGGGTGACGATGGGGTTAC+CGG | 0.394628 | 7_1:-57632157 | None:intergenic |
| AACATCGTCTTCAAAGTTAA+GGG | 0.424422 | 7_1:+57632090 | Msa1026080:CDS |
| TCAATATTGTACTCCGTATC+CGG | 0.435276 | 7_1:+57631999 | Msa1026080:CDS |
| GCAGAAGGTTGTGGTTGATA+AGG | 0.450340 | 7_1:-57631934 | None:intergenic |
| TATAAAAGCGTAATCAATGT+TGG | 0.462661 | 7_1:-57634238 | None:intergenic |
| TTCACCACCGCGAGTTCCAC+CGG | 0.471983 | 7_1:-57632018 | None:intergenic |
| ATTATGGTGGTGGGGAGTGG+TGG | 0.478500 | 7_1:-57631970 | None:intergenic |
| ATAAAAGCGTAATCAATGTT+GGG | 0.479628 | 7_1:-57634237 | None:intergenic |
| GTGGTGGGGAGTGGTGGCAT+CGG | 0.489299 | 7_1:-57631964 | None:intergenic |
| ATCTAATAACATTGTTGCAC+AGG | 0.491705 | 7_1:+57634028 | Msa1026080:CDS |
| ACCGCGAGTTCCACCGGATA+CGG | 0.506167 | 7_1:-57632012 | None:intergenic |
| CATACGTGACCACCGTGTCT+TGG | 0.511624 | 7_1:+57632125 | Msa1026080:CDS |
| TTGAGGACCTATTATGGTGG+TGG | 0.512301 | 7_1:-57631980 | None:intergenic |
| CGATCTTGCACTGTTTATGC+TGG | 0.521359 | 7_1:+57634002 | Msa1026080:CDS |
| ACTTTAAAGTCAGAGGCAGT+TGG | 0.523990 | 7_1:+57633973 | Msa1026080:CDS |
| CGTGTCTTGGTTGATGCCGC+CGG | 0.540357 | 7_1:+57632138 | Msa1026080:CDS |
| CATCGTCACCCTACGTCGTA+AGG | 0.545177 | 7_1:+57632167 | Msa1026080:CDS |
| CAAGACACGGTGGTCACGTA+TGG | 0.560214 | 7_1:-57632124 | None:intergenic |
| TGAGGACCTATTATGGTGGT+GGG | 0.561040 | 7_1:-57631979 | None:intergenic |
| ATTGACTATGCATGATCGGT+GGG | 0.561743 | 7_1:+57633824 | Msa1026080:CDS |
| GATCGGTGGGAAGCGTATAG+AGG | 0.562084 | 7_1:+57633837 | Msa1026080:CDS |
| AGGTCAAAGCACAAATGCTA+AGG | 0.563005 | 7_1:+57633857 | Msa1026080:CDS |
| GGTGCAGATGCAGAAGGTTG+TGG | 0.563335 | 7_1:-57631943 | None:intergenic |
| AACGGTTAAGTTGTCTGCAA+TGG | 0.565832 | 7_1:-57632052 | None:intergenic |
| TGAACATACCTTACGACGTA+GGG | 0.570757 | 7_1:-57632175 | None:intergenic |
| GTTTGTGACTTTAAAGTCAG+AGG | 0.577508 | 7_1:+57633966 | Msa1026080:CDS |
| AGATATTGACTATGCATGAT+CGG | 0.578461 | 7_1:+57633820 | Msa1026080:intron |
| TATTGACTATGCATGATCGG+TGG | 0.603063 | 7_1:+57633823 | Msa1026080:CDS |
| GTTTCCGTTGACATCAGTAA+CGG | 0.626878 | 7_1:-57632070 | None:intergenic |
| TTAACCGTTACTGATGTCAA+CGG | 0.627879 | 7_1:+57632066 | Msa1026080:CDS |
| GGATACGGAGTACAATATTG+AGG | 0.634570 | 7_1:-57631997 | None:intergenic |
| ATGCAAAGAATAGTAACTAG+AGG | 0.634925 | 7_1:+57634298 | Msa1026080:CDS |
| CTTACGACGTAGGGTGACGA+TGG | 0.640714 | 7_1:-57632166 | None:intergenic |
| TTACGACGTAGGGTGACGAT+GGG | 0.646623 | 7_1:-57632165 | None:intergenic |
| ATATTGTACTCCGTATCCGG+TGG | 0.669257 | 7_1:+57632002 | Msa1026080:CDS |
| GGTGACGATGGGGTTACCGG+CGG | 0.670759 | 7_1:-57632154 | None:intergenic |
| CGGCGGCATCAACCAAGACA+CGG | 0.676606 | 7_1:-57632137 | None:intergenic |
| GAGGACCTATTATGGTGGTG+GGG | 0.685164 | 7_1:-57631978 | None:intergenic |
| GGCATCGGTGCAGATGCAGA+AGG | 0.689277 | 7_1:-57631949 | None:intergenic |
| TTGAACATACCTTACGACGT+AGG | 0.699904 | 7_1:-57632176 | None:intergenic |
| GTATCCGGTGGAACTCGCGG+TGG | 0.710572 | 7_1:+57632014 | Msa1026080:CDS |
| ATATTGAGGACCTATTATGG+TGG | 0.714411 | 7_1:-57631983 | None:intergenic |
| TACGACGTAGGGTGACGATG+GGG | 0.740671 | 7_1:-57632164 | None:intergenic |
| CGGCATCAACCAAGACACGG+TGG | 0.767771 | 7_1:-57632134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAATAGAAATGAAA+CGG | + | chr7_1:57632983-57633002 | Msa1026080:intron | 10.0% |
| !! | TACAAGAAATAAATAAAATT+GGG | - | chr7_1:57633467-57633486 | None:intergenic | 10.0% |
| !!! | TTAAACTACATTATTTTTAT+AGG | - | chr7_1:57633767-57633786 | None:intergenic | 10.0% |
| !! | ATTTAGTTACAGATAAAAAA+AGG | + | chr7_1:57632232-57632251 | Msa1026080:intron | 15.0% |
| !!! | AAATTATGGACTAATTATAA+TGG | - | chr7_1:57632496-57632515 | None:intergenic | 15.0% |
| !! | AACTATTAATTTAACTCAAT+TGG | + | chr7_1:57632810-57632829 | Msa1026080:intron | 15.0% |
| !! | ATTAAAAATAGAAATGAAAC+GGG | + | chr7_1:57632984-57633003 | Msa1026080:intron | 15.0% |
| !! | CTACAAGAAATAAATAAAAT+TGG | - | chr7_1:57633468-57633487 | None:intergenic | 15.0% |
| !!! | ATTTTATTTATTTCTTGTAG+TGG | + | chr7_1:57633468-57633487 | Msa1026080:intron | 15.0% |
| !!! | AGAAGATTTTTTTTTAATCT+CGG | - | chr7_1:57633670-57633689 | None:intergenic | 15.0% |
| !!! | TTTTAATTAAGTACTTTGAT+TGG | + | chr7_1:57634081-57634100 | Msa1026080:intron | 15.0% |
| !!! | AATCACAAATTAATTTTTTG+TGG | + | chr7_1:57634127-57634146 | Msa1026080:intron | 15.0% |
| !! | TCTTAAGATATAAGATTCAA+TGG | + | chr7_1:57632303-57632322 | Msa1026080:intron | 20.0% |
| !! | TTGACATATCTTATTCATAT+TGG | - | chr7_1:57632448-57632467 | None:intergenic | 20.0% |
| !! | ACTCATTACATACAAAATTA+TGG | - | chr7_1:57632510-57632529 | None:intergenic | 20.0% |
| !! | TCTAATTGATAAGATAAGAT+CGG | - | chr7_1:57632903-57632922 | None:intergenic | 20.0% |
| !! | TTAAGACATTTAATCTAAAC+CGG | - | chr7_1:57633251-57633270 | None:intergenic | 20.0% |
| !! | TTGTGATTAGTATATATAGT+CGG | - | chr7_1:57634115-57634134 | None:intergenic | 20.0% |
| ! | TAGCTCATATAAAAAGTTAG+TGG | + | chr7_1:57632582-57632601 | Msa1026080:intron | 25.0% |
| ! | ATCTTATCAATTAGATGTTG+TGG | + | chr7_1:57632908-57632927 | Msa1026080:intron | 25.0% |
| ! | TTAAATAAGTTAGCCCATAT+TGG | - | chr7_1:57633228-57633247 | None:intergenic | 25.0% |
| !! | TTATTTATTTCTTGTAGTGG+TGG | + | chr7_1:57633471-57633490 | Msa1026080:intron | 25.0% |
| ! | GTCTCAAATTTAAATACTTC+TGG | + | chr7_1:57633529-57633548 | Msa1026080:intron | 25.0% |
| !!! | TTTGGTCTTAAATTGCATTA+GGG | - | chr7_1:57633910-57633929 | None:intergenic | 25.0% |
| !!! | ATTTGGTCTTAAATTGCATT+AGG | - | chr7_1:57633911-57633930 | None:intergenic | 25.0% |
| ! | TGTGATTAGTATATATAGTC+GGG | - | chr7_1:57634114-57634133 | None:intergenic | 25.0% |
| !! | AATTGGTAAAGACCATTTTA+TGG | + | chr7_1:57634203-57634222 | Msa1026080:CDS | 25.0% |
| !! | ATAAAAGCGTAATCAATGTT+GGG | - | chr7_1:57634240-57634259 | None:intergenic | 25.0% |
| !! | TATAAAAGCGTAATCAATGT+TGG | - | chr7_1:57634241-57634260 | None:intergenic | 25.0% |
| !! | ATTTTCAATTCGTGTGTAAT+AGG | + | chr7_1:57634355-57634374 | Msa1026080:three_prime_UTR | 25.0% |
| ACAATATTGAGGACCTATTA+TGG | - | chr7_1:57631989-57632008 | None:intergenic | 30.0% | |
| AAACATCGTCTTCAAAGTTA+AGG | + | chr7_1:57632089-57632108 | Msa1026080:CDS | 30.0% | |
| AACATCGTCTTCAAAGTTAA+GGG | + | chr7_1:57632090-57632109 | Msa1026080:CDS | 30.0% | |
| ! | CAAGTATACAAGCTTTTACT+TGG | + | chr7_1:57632258-57632277 | Msa1026080:intron | 30.0% |
| AAAGCAAGCCAAATTACAAA+CGG | + | chr7_1:57632538-57632557 | Msa1026080:intron | 30.0% | |
| AAAAAGACCCGTTTGTAATT+TGG | - | chr7_1:57632549-57632568 | None:intergenic | 30.0% | |
| ! | AAATTACAAACGGGTCTTTT+TGG | + | chr7_1:57632548-57632567 | Msa1026080:intron | 30.0% |
| !! | TCACATCAATAAGTTGATAG+TGG | - | chr7_1:57632611-57632630 | None:intergenic | 30.0% |
| CAACTTATTGATGTGATTTC+TGG | + | chr7_1:57632615-57632634 | Msa1026080:intron | 30.0% | |
| AAAATAGAAATGAAACGGGT+TGG | + | chr7_1:57632988-57633007 | Msa1026080:intron | 30.0% | |
| ! | TTTTACTCCTCTAGTATTTG+TGG | + | chr7_1:57633049-57633068 | Msa1026080:intron | 30.0% |
| ! | TATGGGCTAACTTATTTAAC+CGG | + | chr7_1:57633229-57633248 | Msa1026080:intron | 30.0% |
| ACAATGACTAGATTTACACA+TGG | + | chr7_1:57633324-57633343 | Msa1026080:intron | 30.0% | |
| TATCTCATTGATGCGTTTAA+AGG | - | chr7_1:57633378-57633397 | None:intergenic | 30.0% | |
| ! | GGTGCTAACAATTTTTATGT+TGG | + | chr7_1:57633550-57633569 | Msa1026080:intron | 30.0% |
| TGAATAAATAGATGCCAATG+TGG | - | chr7_1:57633696-57633715 | None:intergenic | 30.0% | |
| GGATTAAACGACACTTTATT+GGG | - | chr7_1:57633746-57633765 | None:intergenic | 30.0% | |
| AGGATTAAACGACACTTTAT+TGG | - | chr7_1:57633747-57633766 | None:intergenic | 30.0% | |
| ! | AGATATTGACTATGCATGAT+CGG | + | chr7_1:57633820-57633839 | Msa1026080:intron | 30.0% |
| AGCAAGAAACACATCTAATT+TGG | - | chr7_1:57633928-57633947 | None:intergenic | 30.0% | |
| ATCTAATAACATTGTTGCAC+AGG | + | chr7_1:57634028-57634047 | Msa1026080:CDS | 30.0% | |
| GATAAACTGTGACCATAAAA+TGG | - | chr7_1:57634218-57634237 | None:intergenic | 30.0% | |
| !! | CATTGATTACGCTTTTATAG+TGG | + | chr7_1:57634242-57634261 | Msa1026080:CDS | 30.0% |
| ATGCAAAGAATAGTAACTAG+AGG | + | chr7_1:57634298-57634317 | Msa1026080:CDS | 30.0% | |
| ATATTGAGGACCTATTATGG+TGG | - | chr7_1:57631986-57632005 | None:intergenic | 35.0% | |
| TCAATATTGTACTCCGTATC+CGG | + | chr7_1:57631999-57632018 | Msa1026080:CDS | 35.0% | |
| TTAACCGTTACTGATGTCAA+CGG | + | chr7_1:57632066-57632085 | Msa1026080:CDS | 35.0% | |
| CACATCTATGATCAAGAAGT+TGG | + | chr7_1:57632348-57632367 | Msa1026080:intron | 35.0% | |
| CAAAATAGATCGAGCCTAAT+AGG | + | chr7_1:57632465-57632484 | Msa1026080:intron | 35.0% | |
| !! | TTATAATGGACCGACCTATT+AGG | - | chr7_1:57632482-57632501 | None:intergenic | 35.0% |
| AAGCAAGCCAAATTACAAAC+GGG | + | chr7_1:57632539-57632558 | Msa1026080:intron | 35.0% | |
| ACTATGAGCTTGTGATCTAA+TGG | - | chr7_1:57633020-57633039 | None:intergenic | 35.0% | |
| TTAGATCACAAGCTCATAGT+AGG | + | chr7_1:57633020-57633039 | Msa1026080:intron | 35.0% | |
| TGATACACCACAAATACTAG+AGG | - | chr7_1:57633059-57633078 | None:intergenic | 35.0% | |
| TGTGCAACTCAATTACAATC+AGG | + | chr7_1:57633179-57633198 | Msa1026080:intron | 35.0% | |
| CAACTCAATTACAATCAGGT+CGG | + | chr7_1:57633183-57633202 | Msa1026080:intron | 35.0% | |
| AACTCAATTACAATCAGGTC+GGG | + | chr7_1:57633184-57633203 | Msa1026080:intron | 35.0% | |
| ACACATGGCGTAAAAAAGTA+AGG | + | chr7_1:57633339-57633358 | Msa1026080:intron | 35.0% | |
| ! | ATGCGTTTAAAGGCTGATTT+GGG | - | chr7_1:57633368-57633387 | None:intergenic | 35.0% |
| !! | CTTTAGAGTGTGTTCTCTTT+AGG | + | chr7_1:57633507-57633526 | Msa1026080:intron | 35.0% |
| GATACAACGAACGACTAATT+TGG | - | chr7_1:57633642-57633661 | None:intergenic | 35.0% | |
| AAAAATCTTCTCGTCCACAT+TGG | + | chr7_1:57633679-57633698 | Msa1026080:intron | 35.0% | |
| !! | GTTTGTGACTTTAAAGTCAG+AGG | + | chr7_1:57633966-57633985 | Msa1026080:CDS | 35.0% |
| !! | ACGGTTACGAGCATTTTAAT+TGG | + | chr7_1:57634186-57634205 | Msa1026080:CDS | 35.0% |
| GGATACGGAGTACAATATTG+AGG | - | chr7_1:57632000-57632019 | None:intergenic | 40.0% | |
| ! | AACGGTTAAGTTGTCTGCAA+TGG | - | chr7_1:57632055-57632074 | None:intergenic | 40.0% |
| GTTTCCGTTGACATCAGTAA+CGG | - | chr7_1:57632073-57632092 | None:intergenic | 40.0% | |
| TGAACATACCTTACGACGTA+GGG | - | chr7_1:57632178-57632197 | None:intergenic | 40.0% | |
| TTGAACATACCTTACGACGT+AGG | - | chr7_1:57632179-57632198 | None:intergenic | 40.0% | |
| ATAGATCGAGCCTAATAGGT+CGG | + | chr7_1:57632469-57632488 | Msa1026080:intron | 40.0% | |
| GGTGTATCAGTCTCAAATTC+AGG | + | chr7_1:57633070-57633089 | Msa1026080:intron | 40.0% | |
| GTCTCAAATTCAGGTCATCA+AGG | + | chr7_1:57633079-57633098 | Msa1026080:intron | 40.0% | |
| !! | TGCGTTTAAAGGCTGATTTG+GGG | - | chr7_1:57633367-57633386 | None:intergenic | 40.0% |
| GATGCGTTTAAAGGCTGATT+TGG | - | chr7_1:57633369-57633388 | None:intergenic | 40.0% | |
| ! | ATTTCTTGTAGTGGTGGTGT+AGG | + | chr7_1:57633477-57633496 | Msa1026080:intron | 40.0% |
| TTGAGCCATCTGCTAATTGA+AGG | + | chr7_1:57633604-57633623 | Msa1026080:intron | 40.0% | |
| TTCCACCTTCAATTAGCAGA+TGG | - | chr7_1:57633612-57633631 | None:intergenic | 40.0% | |
| GACACTTTATTGGGTCATTG+GGG | - | chr7_1:57633737-57633756 | None:intergenic | 40.0% | |
| CGACACTTTATTGGGTCATT+GGG | - | chr7_1:57633738-57633757 | None:intergenic | 40.0% | |
| ACGACACTTTATTGGGTCAT+TGG | - | chr7_1:57633739-57633758 | None:intergenic | 40.0% | |
| ! | TATTGACTATGCATGATCGG+TGG | + | chr7_1:57633823-57633842 | Msa1026080:CDS | 40.0% |
| ATTGACTATGCATGATCGGT+GGG | + | chr7_1:57633824-57633843 | Msa1026080:CDS | 40.0% | |
| AGGTCAAAGCACAAATGCTA+AGG | + | chr7_1:57633857-57633876 | Msa1026080:CDS | 40.0% | |
| !! | ACTTTAAAGTCAGAGGCAGT+TGG | + | chr7_1:57633973-57633992 | Msa1026080:CDS | 40.0% |
| GTGGCATTAATCGTGATTCT+TGG | + | chr7_1:57634261-57634280 | Msa1026080:CDS | 40.0% | |
| ! | GCAGAAGGTTGTGGTTGATA+AGG | - | chr7_1:57631937-57631956 | None:intergenic | 45.0% |
| TGAGGACCTATTATGGTGGT+GGG | - | chr7_1:57631982-57632001 | None:intergenic | 45.0% | |
| TTGAGGACCTATTATGGTGG+TGG | - | chr7_1:57631983-57632002 | None:intergenic | 45.0% | |
| ATATTGTACTCCGTATCCGG+TGG | + | chr7_1:57632002-57632021 | Msa1026080:CDS | 45.0% | |
| !! | AGAAATGAAACGGGTTGGAC+TGG | + | chr7_1:57632993-57633012 | Msa1026080:intron | 45.0% |
| ! | AGTTAGCCCATATTGGCCTA+CGG | - | chr7_1:57633221-57633240 | None:intergenic | 45.0% |
| TCGCATCATGCCAATCTATG+GGG | - | chr7_1:57633431-57633450 | None:intergenic | 45.0% | |
| GTCGCATCATGCCAATCTAT+GGG | - | chr7_1:57633432-57633451 | None:intergenic | 45.0% | |
| AGCCATCTGCTAATTGAAGG+TGG | + | chr7_1:57633607-57633626 | Msa1026080:intron | 45.0% | |
| CGATCTTGCACTGTTTATGC+TGG | + | chr7_1:57634002-57634021 | Msa1026080:CDS | 45.0% | |
| ! | GCAGATGCACAAAAAGCACA+CGG | + | chr7_1:57634167-57634186 | Msa1026080:intron | 45.0% |
| !!! | ATTTCTATTTTTAATTTATT+TGG | - | chr7_1:57632979-57632998 | None:intergenic | 5.0% |
| ! | GAGGACCTATTATGGTGGTG+GGG | - | chr7_1:57631981-57632000 | None:intergenic | 50.0% |
| TTACGACGTAGGGTGACGAT+GGG | - | chr7_1:57632168-57632187 | None:intergenic | 50.0% | |
| ! | CAATCAGGTCGGGTTGTAGT+CGG | + | chr7_1:57633194-57633213 | Msa1026080:intron | 50.0% |
| ! | GTTAGCCCATATTGGCCTAC+GGG | - | chr7_1:57633220-57633239 | None:intergenic | 50.0% |
| GCCAATCTATGGGGACATGT+GGG | - | chr7_1:57633422-57633441 | None:intergenic | 50.0% | |
| TGCCAATCTATGGGGACATG+TGG | - | chr7_1:57633423-57633442 | None:intergenic | 50.0% | |
| CGTCGCATCATGCCAATCTA+TGG | - | chr7_1:57633433-57633452 | None:intergenic | 50.0% | |
| GGTGCAGATGCAGAAGGTTG+TGG | - | chr7_1:57631946-57631965 | None:intergenic | 55.0% | |
| !! | ATTATGGTGGTGGGGAGTGG+TGG | - | chr7_1:57631973-57631992 | None:intergenic | 55.0% |
| !! | CCTATTATGGTGGTGGGGAG+TGG | - | chr7_1:57631976-57631995 | None:intergenic | 55.0% |
| CCACTCCCCACCACCATAAT+AGG | + | chr7_1:57631973-57631992 | Msa1026080:CDS | 55.0% | |
| GGAACTCGCGGTGGTGAAAA+AGG | + | chr7_1:57632023-57632042 | Msa1026080:CDS | 55.0% | |
| CAAGACACGGTGGTCACGTA+TGG | - | chr7_1:57632127-57632146 | None:intergenic | 55.0% | |
| CATACGTGACCACCGTGTCT+TGG | + | chr7_1:57632125-57632144 | Msa1026080:CDS | 55.0% | |
| TAGGGTGACGATGGGGTTAC+CGG | - | chr7_1:57632160-57632179 | None:intergenic | 55.0% | |
| TACGACGTAGGGTGACGATG+GGG | - | chr7_1:57632167-57632186 | None:intergenic | 55.0% | |
| CTTACGACGTAGGGTGACGA+TGG | - | chr7_1:57632169-57632188 | None:intergenic | 55.0% | |
| CATCGTCACCCTACGTCGTA+AGG | + | chr7_1:57632167-57632186 | Msa1026080:CDS | 55.0% | |
| GCCCACATGTCCCCATAGAT+TGG | + | chr7_1:57633418-57633437 | Msa1026080:intron | 55.0% | |
| ! | GATCGGTGGGAAGCGTATAG+AGG | + | chr7_1:57633837-57633856 | Msa1026080:CDS | 55.0% |
| !! | GGCATCGGTGCAGATGCAGA+AGG | - | chr7_1:57631952-57631971 | None:intergenic | 60.0% |
| TCCGTATCCGGTGGAACTCG+CGG | + | chr7_1:57632011-57632030 | Msa1026080:CDS | 60.0% | |
| ACCGCGAGTTCCACCGGATA+CGG | - | chr7_1:57632015-57632034 | None:intergenic | 60.0% | |
| TTCACCACCGCGAGTTCCAC+CGG | - | chr7_1:57632021-57632040 | None:intergenic | 60.0% | |
| CGGCATCAACCAAGACACGG+TGG | - | chr7_1:57632137-57632156 | None:intergenic | 60.0% | |
| CGGCGGCATCAACCAAGACA+CGG | - | chr7_1:57632140-57632159 | None:intergenic | 60.0% | |
| ! | CGTGTCTTGGTTGATGCCGC+CGG | + | chr7_1:57632138-57632157 | Msa1026080:CDS | 60.0% |
| AGTCGGCCCGTAGGCCAATA+TGG | + | chr7_1:57633211-57633230 | Msa1026080:intron | 60.0% | |
| GTCGGCCCGTAGGCCAATAT+GGG | + | chr7_1:57633212-57633231 | Msa1026080:intron | 60.0% | |
| ! | GTGGTGGGGAGTGGTGGCAT+CGG | - | chr7_1:57631967-57631986 | None:intergenic | 65.0% |
| GTATCCGGTGGAACTCGCGG+TGG | + | chr7_1:57632014-57632033 | Msa1026080:CDS | 65.0% | |
| GGTGACGATGGGGTTACCGG+CGG | - | chr7_1:57632157-57632176 | None:intergenic | 65.0% | |
| ! | TCGGGTTGTAGTCGGCCCGT+AGG | + | chr7_1:57633202-57633221 | Msa1026080:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 57631925 | 57634393 | 57631925 | ID=Msa1026080;Name=Msa1026080 |
| chr7_1 | mRNA | 57631925 | 57634393 | 57631925 | ID=Msa1026080-mRNA-1;Parent=Msa1026080;Name=Msa1026080-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|1|0.66|1|1|1|3|76|212 |
| chr7_1 | exon | 57631925 | 57632188 | 57631925 | ID=Msa1026080-mRNA-1:exon:11488;Parent=Msa1026080-mRNA-1 |
| chr7_1 | exon | 57633822 | 57634049 | 57633822 | ID=Msa1026080-mRNA-1:exon:11489;Parent=Msa1026080-mRNA-1 |
| chr7_1 | exon | 57634171 | 57634393 | 57634171 | ID=Msa1026080-mRNA-1:exon:11490;Parent=Msa1026080-mRNA-1 |
| chr7_1 | CDS | 57631925 | 57632188 | 57631925 | ID=Msa1026080-mRNA-1:cds;Parent=Msa1026080-mRNA-1 |
| chr7_1 | CDS | 57633822 | 57634049 | 57633822 | ID=Msa1026080-mRNA-1:cds;Parent=Msa1026080-mRNA-1 |
| chr7_1 | CDS | 57634171 | 57634317 | 57634171 | ID=Msa1026080-mRNA-1:cds;Parent=Msa1026080-mRNA-1 |
| chr7_1 | three_prime_UTR | 57634318 | 57634393 | 57634318 | ID=Msa1026080-mRNA-1:three_prime_utr;Parent=Msa1026080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
