Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85860.t1 | XP_003619101.2 | 97 | 297 | 9 | 0 | 16 | 312 | 49 | 345 | 3.70E-159 | 570.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85860.t1 | A6QP05 | 46.9 | 292 | 149 | 5 | 19 | 308 | 26 | 313 | 6.0e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85860.t1 | G7KIB0 | 97.0 | 297 | 9 | 0 | 16 | 312 | 49 | 345 | 2.7e-159 | 570.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene85860 | 0.844082 | 9.42E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene85860 | 0.818337 | 2.07E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene85860 | 0.852061 | 5.91E-61 | -1.69E-46 |
| MS.gene049170 | MS.gene85860 | 0.819259 | 1.28E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene85860 | 0.802305 | 5.97E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene85860 | 0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene85860 | 0.822784 | 1.97E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene85860 | 0.823632 | 1.25E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene85860 | 0.854969 | 8.64E-62 | -1.69E-46 |
| MS.gene049993 | MS.gene85860 | 0.847746 | 9.51E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene85860 | 0.833312 | 5.73E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene85860 | 0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene050133 | MS.gene85860 | -0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene050168 | MS.gene85860 | 0.825362 | 4.89E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene85860 | 0.815041 | 1.13E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene85860 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene050228 | MS.gene85860 | 0.80214 | 6.46E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene85860 | 0.836185 | 1.08E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene85860 | 0.822393 | 2.43E-53 | -1.69E-46 |
| MS.gene050398 | MS.gene85860 | 0.824041 | 1.00E-53 | -1.69E-46 |
| MS.gene050400 | MS.gene85860 | 0.827607 | 1.42E-54 | -1.69E-46 |
| MS.gene050404 | MS.gene85860 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene85860 | 0.85346 | 2.36E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene85860 | -0.879865 | 8.79E-70 | -1.69E-46 |
| MS.gene050464 | MS.gene85860 | 0.851911 | 6.52E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene85860 | 0.847971 | 8.25E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene85860 | -0.815364 | 9.60E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene85860 | 0.85542 | 6.39E-62 | -1.69E-46 |
| MS.gene050650 | MS.gene85860 | 0.812654 | 3.80E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene85860 | 0.865307 | 6.50E-65 | -1.69E-46 |
| MS.gene050971 | MS.gene85860 | 0.840123 | 1.05E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene85860 | 0.809995 | 1.44E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene85860 | 0.868655 | 5.55E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene85860 | 0.843324 | 1.50E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene85860 | 0.85814 | 1.01E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene85860 | 0.875083 | 4.08E-68 | -1.69E-46 |
| MS.gene052011 | MS.gene85860 | -0.886641 | 2.86E-72 | -1.69E-46 |
| MS.gene052077 | MS.gene85860 | 0.906562 | 1.30E-80 | -1.69E-46 |
| MS.gene052134 | MS.gene85860 | 0.822699 | 2.06E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene85860 | 0.830481 | 2.87E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene85860 | 0.83799 | 3.75E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene85860 | 0.892058 | 2.25E-74 | -1.69E-46 |
| MS.gene052253 | MS.gene85860 | 0.882215 | 1.26E-70 | -1.69E-46 |
| MS.gene052255 | MS.gene85860 | 0.837362 | 5.43E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene85860 | 0.84509 | 5.04E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene85860 | 0.878956 | 1.85E-69 | -1.69E-46 |
| MS.gene052389 | MS.gene85860 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene85860 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene85860 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene052590 | MS.gene85860 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene85860 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene85860 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene85860 | 0.867551 | 1.26E-65 | -1.69E-46 |
| MS.gene053330 | MS.gene85860 | 0.830672 | 2.57E-55 | -1.69E-46 |
| MS.gene053494 | MS.gene85860 | 0.841981 | 3.42E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene85860 | 0.850385 | 1.76E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene85860 | 0.858951 | 5.79E-63 | -1.69E-46 |
| MS.gene053928 | MS.gene85860 | 0.874938 | 4.57E-68 | -1.69E-46 |
| MS.gene054010 | MS.gene85860 | 0.832273 | 1.04E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene85860 | 0.844942 | 5.53E-59 | -1.69E-46 |
| MS.gene054012 | MS.gene85860 | 0.842692 | 2.21E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene85860 | 0.837424 | 5.24E-57 | -1.69E-46 |
| MS.gene054102 | MS.gene85860 | 0.834534 | 2.83E-56 | -1.69E-46 |
| MS.gene054110 | MS.gene85860 | 0.807362 | 5.25E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene85860 | 0.822683 | 2.08E-53 | -1.69E-46 |
| MS.gene05413 | MS.gene85860 | 0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene85860 | 0.902062 | 1.42E-78 | -1.69E-46 |
| MS.gene054349 | MS.gene85860 | 0.948351 | 1.12E-106 | -1.69E-46 |
| MS.gene054556 | MS.gene85860 | 0.861406 | 1.05E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene85860 | 0.844489 | 7.32E-59 | -1.69E-46 |
| MS.gene054918 | MS.gene85860 | 0.823859 | 1.10E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene85860 | 0.850344 | 1.80E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene85860 | 0.830831 | 2.35E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene85860 | 0.860594 | 1.85E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene85860 | 0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene85860 | 0.83498 | 2.19E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene85860 | 0.810569 | 1.08E-50 | -1.69E-46 |
| MS.gene055428 | MS.gene85860 | 0.807487 | 4.93E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene85860 | 0.815633 | 8.36E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene85860 | 0.909656 | 4.47E-82 | -1.69E-46 |
| MS.gene05556 | MS.gene85860 | 0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene85860 | 0.860038 | 2.73E-63 | -1.69E-46 |
| MS.gene055666 | MS.gene85860 | 0.803477 | 3.42E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene85860 | 0.82123 | 4.51E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene85860 | 0.806682 | 7.31E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene85860 | 0.823458 | 1.37E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene85860 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene056233 | MS.gene85860 | 0.814304 | 1.65E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene85860 | 0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene056447 | MS.gene85860 | 0.81547 | 9.09E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene85860 | 0.830165 | 3.43E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene85860 | 0.815346 | 9.69E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene85860 | 0.860199 | 2.44E-63 | -1.69E-46 |
| MS.gene056723 | MS.gene85860 | 0.878616 | 2.43E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene85860 | -0.844175 | 8.89E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene85860 | 0.866917 | 2.01E-65 | -1.69E-46 |
| MS.gene05702 | MS.gene85860 | 0.869231 | 3.61E-66 | -1.69E-46 |
| MS.gene057121 | MS.gene85860 | 0.811162 | 8.04E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene85860 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene85860 | 0.891467 | 3.87E-74 | -1.69E-46 |
| MS.gene057448 | MS.gene85860 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene85860 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene85860 | 0.820854 | 5.50E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene85860 | 0.861353 | 1.09E-63 | -1.69E-46 |
| MS.gene057750 | MS.gene85860 | 0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene85860 | 0.858109 | 1.03E-62 | -1.69E-46 |
| MS.gene057824 | MS.gene85860 | 0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene057825 | MS.gene85860 | 0.849396 | 3.32E-60 | -1.69E-46 |
| MS.gene057826 | MS.gene85860 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene85860 | 0.850515 | 1.62E-60 | -1.69E-46 |
| MS.gene058007 | MS.gene85860 | 0.842398 | 2.65E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene85860 | 0.844962 | 5.46E-59 | -1.69E-46 |
| MS.gene058139 | MS.gene85860 | 0.809489 | 1.85E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene85860 | 0.887116 | 1.89E-72 | -1.69E-46 |
| MS.gene058233 | MS.gene85860 | 0.818683 | 1.72E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene85860 | 0.845986 | 2.88E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene85860 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene058435 | MS.gene85860 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene85860 | 0.820144 | 8.01E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene85860 | 0.812611 | 3.89E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene85860 | 0.837009 | 6.69E-57 | -1.69E-46 |
| MS.gene058749 | MS.gene85860 | 0.818676 | 1.73E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene85860 | 0.806777 | 6.98E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene85860 | 0.842864 | 1.99E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene85860 | 0.849199 | 3.77E-60 | -1.69E-46 |
| MS.gene058949 | MS.gene85860 | 0.830089 | 3.57E-55 | -1.69E-46 |
| MS.gene058995 | MS.gene85860 | 0.80651 | 7.94E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene85860 | 0.889849 | 1.67E-73 | -1.69E-46 |
| MS.gene059043 | MS.gene85860 | -0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene85860 | 0.870484 | 1.41E-66 | -1.69E-46 |
| MS.gene059082 | MS.gene85860 | 0.830898 | 2.27E-55 | -1.69E-46 |
| MS.gene059141 | MS.gene85860 | 0.812915 | 3.33E-51 | -1.69E-46 |
| MS.gene059247 | MS.gene85860 | 0.82474 | 6.85E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene85860 | 0.870277 | 1.65E-66 | -1.69E-46 |
| MS.gene059294 | MS.gene85860 | 0.860518 | 1.95E-63 | -1.69E-46 |
| MS.gene059420 | MS.gene85860 | 0.892041 | 2.29E-74 | -1.69E-46 |
| MS.gene059462 | MS.gene85860 | 0.844654 | 6.61E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene85860 | 0.831915 | 1.27E-55 | -1.69E-46 |
| MS.gene059609 | MS.gene85860 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene85860 | 0.806091 | 9.73E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene85860 | 0.846823 | 1.71E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene85860 | 0.84331 | 1.52E-58 | -1.69E-46 |
| MS.gene059695 | MS.gene85860 | 0.847753 | 9.47E-60 | -1.69E-46 |
| MS.gene059788 | MS.gene85860 | 0.806417 | 8.31E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene85860 | 0.853947 | 1.71E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene85860 | 0.866001 | 3.92E-65 | -1.69E-46 |
| MS.gene059876 | MS.gene85860 | 0.8218 | 3.33E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene85860 | 0.837256 | 5.79E-57 | -1.69E-46 |
| MS.gene060247 | MS.gene85860 | 0.852769 | 3.71E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene85860 | 0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene85860 | 0.82232 | 2.52E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene85860 | 0.826889 | 2.12E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene85860 | 0.82854 | 8.49E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene85860 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene85860 | 0.889441 | 2.42E-73 | -1.69E-46 |
| MS.gene061114 | MS.gene85860 | -0.801749 | 7.77E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene85860 | 0.86203 | 6.76E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene85860 | 0.870018 | 2.00E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061157 | MS.gene85860 | PPI |
| MS.gene55839 | MS.gene85860 | PPI |
| MS.gene49121 | MS.gene85860 | PPI |
| MS.gene49117 | MS.gene85860 | PPI |
| MS.gene06120 | MS.gene85860 | PPI |
| MS.gene061893 | MS.gene85860 | PPI |
| MS.gene24053 | MS.gene85860 | PPI |
| MS.gene048973 | MS.gene85860 | PPI |
| MS.gene061155 | MS.gene85860 | PPI |
| MS.gene061158 | MS.gene85860 | PPI |
| MS.gene006263 | MS.gene85860 | PPI |
| MS.gene34140 | MS.gene85860 | PPI |
| MS.gene49118 | MS.gene85860 | PPI |
| MS.gene34137 | MS.gene85860 | PPI |
| MS.gene20199 | MS.gene85860 | PPI |
| MS.gene34141 | MS.gene85860 | PPI |
| MS.gene061154 | MS.gene85860 | PPI |
| MS.gene006262 | MS.gene85860 | PPI |
| MS.gene006264 | MS.gene85860 | PPI |
| MS.gene006265 | MS.gene85860 | PPI |
| MS.gene058995 | MS.gene85860 | PPI |
| MS.gene037994 | MS.gene85860 | PPI |
| MS.gene49120 | MS.gene85860 | PPI |
| MS.gene34138 | MS.gene85860 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85860.t1 | MTR_6g041980 | 96.970 | 297 | 9 | 0 | 16 | 312 | 49 | 345 | 0.0 | 597 |
| MS.gene85860.t1 | MTR_6g041980 | 93.299 | 194 | 13 | 0 | 16 | 209 | 49 | 242 | 4.66e-132 | 376 |
| MS.gene85860.t1 | MTR_6g053550 | 31.317 | 281 | 174 | 8 | 15 | 277 | 17 | 296 | 1.34e-30 | 117 |
| MS.gene85860.t1 | MTR_3g077410 | 29.545 | 264 | 169 | 7 | 33 | 281 | 37 | 298 | 1.75e-27 | 109 |
| MS.gene85860.t1 | MTR_1g100395 | 29.779 | 272 | 161 | 9 | 33 | 283 | 29 | 291 | 7.36e-27 | 107 |
| MS.gene85860.t1 | MTR_4g105310 | 30.385 | 260 | 164 | 7 | 37 | 281 | 52 | 309 | 2.75e-26 | 106 |
| MS.gene85860.t1 | MTR_1g100315 | 29.008 | 262 | 164 | 6 | 33 | 277 | 29 | 285 | 3.93e-26 | 105 |
| MS.gene85860.t1 | MTR_8g099995 | 28.881 | 277 | 178 | 8 | 19 | 277 | 19 | 294 | 8.00e-25 | 102 |
| MS.gene85860.t1 | MTR_1g100335 | 28.516 | 256 | 169 | 7 | 33 | 275 | 29 | 283 | 2.77e-24 | 100 |
| MS.gene85860.t1 | MTR_8g098415 | 28.185 | 259 | 172 | 6 | 36 | 281 | 32 | 289 | 1.02e-23 | 99.0 |
| MS.gene85860.t1 | MTR_8g098415 | 28.295 | 258 | 171 | 6 | 37 | 281 | 33 | 289 | 1.18e-23 | 99.0 |
| MS.gene85860.t1 | MTR_1g068970 | 26.959 | 319 | 212 | 8 | 3 | 300 | 2 | 320 | 2.91e-23 | 98.2 |
| MS.gene85860.t1 | MTR_7g099850 | 27.308 | 260 | 170 | 5 | 37 | 280 | 38 | 294 | 6.39e-23 | 97.1 |
| MS.gene85860.t1 | MTR_6g053600 | 30.137 | 219 | 140 | 5 | 33 | 238 | 23 | 241 | 6.64e-22 | 94.0 |
| MS.gene85860.t1 | MTR_1g100305 | 28.295 | 258 | 171 | 6 | 33 | 277 | 29 | 285 | 9.60e-21 | 90.9 |
| MS.gene85860.t1 | MTR_4g105310 | 29.439 | 214 | 139 | 5 | 37 | 240 | 52 | 263 | 2.15e-20 | 89.0 |
| MS.gene85860.t1 | MTR_1g100335 | 28.571 | 203 | 136 | 4 | 33 | 226 | 29 | 231 | 3.44e-20 | 88.6 |
| MS.gene85860.t1 | MTR_1g100335 | 28.571 | 203 | 136 | 4 | 33 | 226 | 29 | 231 | 4.02e-20 | 88.6 |
| MS.gene85860.t1 | MTR_8g098415 | 28.571 | 203 | 131 | 6 | 92 | 281 | 31 | 232 | 2.13e-18 | 83.6 |
| MS.gene85860.t1 | MTR_8g098415 | 28.161 | 174 | 118 | 2 | 37 | 203 | 33 | 206 | 1.32e-16 | 77.8 |
| MS.gene85860.t1 | MTR_1g068970 | 26.754 | 228 | 148 | 7 | 92 | 300 | 26 | 253 | 1.31e-15 | 75.5 |
| MS.gene85860.t1 | MTR_3g091070 | 29.714 | 175 | 98 | 4 | 3 | 170 | 9 | 165 | 9.13e-15 | 73.9 |
| MS.gene85860.t1 | MTR_3g009190 | 29.944 | 177 | 110 | 5 | 24 | 191 | 52 | 223 | 1.69e-14 | 73.6 |
| MS.gene85860.t1 | MTR_3g009190 | 25.965 | 285 | 170 | 10 | 24 | 276 | 70 | 345 | 1.71e-14 | 73.9 |
| MS.gene85860.t1 | MTR_4g064887 | 28.458 | 253 | 153 | 9 | 31 | 272 | 15 | 250 | 6.65e-14 | 70.9 |
| MS.gene85860.t1 | MTR_4g087460 | 25.000 | 288 | 157 | 9 | 37 | 278 | 25 | 299 | 1.58e-13 | 70.5 |
| MS.gene85860.t1 | MTR_6g081020 | 26.613 | 248 | 162 | 9 | 36 | 266 | 64 | 308 | 6.94e-13 | 68.9 |
| MS.gene85860.t1 | MTR_6g453040 | 28.249 | 177 | 113 | 5 | 24 | 191 | 52 | 223 | 7.11e-13 | 67.8 |
| MS.gene85860.t1 | MTR_4g064887 | 28.959 | 221 | 137 | 7 | 21 | 237 | 5 | 209 | 8.37e-13 | 67.0 |
| MS.gene85860.t1 | MTR_8g044240 | 36.559 | 93 | 59 | 0 | 29 | 121 | 67 | 159 | 8.50e-13 | 68.6 |
| MS.gene85860.t1 | MTR_6g453040 | 25.000 | 284 | 174 | 9 | 24 | 276 | 30 | 305 | 9.46e-13 | 68.2 |
| MS.gene85860.t1 | MTR_6g453040 | 28.249 | 177 | 113 | 5 | 24 | 191 | 52 | 223 | 2.32e-12 | 66.6 |
| MS.gene85860.t1 | MTR_2g079710 | 26.556 | 241 | 141 | 8 | 24 | 233 | 78 | 313 | 2.56e-12 | 67.4 |
| MS.gene85860.t1 | MTR_7g063260 | 28.161 | 174 | 111 | 5 | 31 | 198 | 16 | 181 | 1.19e-11 | 64.3 |
| MS.gene85860.t1 | MTR_3g068070 | 31.395 | 172 | 93 | 6 | 31 | 182 | 15 | 181 | 1.23e-11 | 64.3 |
| MS.gene85860.t1 | MTR_7g063270 | 27.586 | 174 | 112 | 5 | 31 | 198 | 16 | 181 | 7.33e-11 | 62.0 |
| MS.gene85860.t1 | MTR_7g063360 | 28.947 | 190 | 119 | 6 | 21 | 204 | 8 | 187 | 7.40e-11 | 62.0 |
| MS.gene85860.t1 | MTR_8g031940 | 25.926 | 297 | 155 | 11 | 34 | 276 | 7 | 292 | 8.63e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85860.t1 | AT4G09750 | 76.610 | 295 | 69 | 0 | 16 | 310 | 26 | 320 | 3.32e-176 | 490 |
| MS.gene85860.t1 | AT5G50130 | 31.439 | 264 | 155 | 9 | 37 | 280 | 40 | 297 | 2.40e-29 | 115 |
| MS.gene85860.t1 | AT5G50130 | 31.179 | 263 | 155 | 9 | 38 | 280 | 8 | 264 | 1.63e-28 | 112 |
| MS.gene85860.t1 | AT5G50130 | 31.061 | 264 | 153 | 10 | 38 | 280 | 8 | 263 | 2.36e-27 | 108 |
| MS.gene85860.t1 | AT4G11410 | 29.572 | 257 | 169 | 5 | 33 | 277 | 29 | 285 | 2.43e-26 | 106 |
| MS.gene85860.t1 | AT4G24050 | 29.153 | 295 | 186 | 9 | 19 | 293 | 19 | 310 | 5.05e-26 | 105 |
| MS.gene85860.t1 | AT5G50130 | 30.263 | 228 | 135 | 7 | 37 | 249 | 40 | 258 | 4.29e-25 | 101 |
| MS.gene85860.t1 | AT5G50130 | 31.250 | 224 | 132 | 7 | 37 | 244 | 40 | 257 | 6.45e-25 | 102 |
| MS.gene85860.t1 | AT5G50130 | 31.330 | 233 | 135 | 8 | 38 | 251 | 8 | 234 | 3.04e-24 | 100 |
| MS.gene85860.t1 | AT4G23420 | 29.278 | 263 | 163 | 7 | 33 | 277 | 46 | 303 | 3.58e-24 | 100 |
| MS.gene85860.t1 | AT4G23420 | 29.278 | 263 | 163 | 7 | 33 | 277 | 29 | 286 | 3.80e-24 | 100 |
| MS.gene85860.t1 | AT4G23420 | 29.278 | 263 | 163 | 7 | 33 | 277 | 29 | 286 | 3.80e-24 | 100 |
| MS.gene85860.t1 | AT5G50130 | 30.131 | 229 | 133 | 8 | 37 | 249 | 40 | 257 | 6.50e-24 | 98.6 |
| MS.gene85860.t1 | AT5G50130 | 31.111 | 225 | 130 | 8 | 37 | 244 | 40 | 256 | 7.94e-24 | 99.8 |
| MS.gene85860.t1 | AT4G23430 | 27.969 | 261 | 169 | 6 | 33 | 277 | 29 | 286 | 8.87e-24 | 99.4 |
| MS.gene85860.t1 | AT4G11410 | 29.557 | 203 | 134 | 3 | 33 | 226 | 29 | 231 | 3.22e-23 | 96.7 |
| MS.gene85860.t1 | AT5G50130 | 31.197 | 234 | 133 | 9 | 38 | 251 | 8 | 233 | 3.45e-23 | 97.4 |
| MS.gene85860.t1 | AT4G23430 | 27.027 | 259 | 172 | 5 | 33 | 277 | 29 | 284 | 2.65e-22 | 95.5 |
| MS.gene85860.t1 | AT4G24050 | 29.464 | 224 | 146 | 5 | 19 | 230 | 19 | 242 | 3.92e-22 | 94.0 |
| MS.gene85860.t1 | AT2G37540 | 30.385 | 260 | 157 | 8 | 36 | 277 | 36 | 289 | 8.32e-21 | 91.3 |
| MS.gene85860.t1 | AT4G23420 | 30.542 | 203 | 132 | 4 | 33 | 226 | 29 | 231 | 1.02e-20 | 90.1 |
| MS.gene85860.t1 | AT4G23420 | 30.542 | 203 | 132 | 4 | 33 | 226 | 29 | 231 | 1.14e-20 | 89.7 |
| MS.gene85860.t1 | AT4G23430 | 27.626 | 257 | 165 | 6 | 33 | 277 | 29 | 276 | 1.50e-20 | 90.5 |
| MS.gene85860.t1 | AT1G64590 | 26.136 | 264 | 172 | 6 | 37 | 281 | 38 | 297 | 1.15e-19 | 88.2 |
| MS.gene85860.t1 | AT5G02540 | 27.237 | 257 | 168 | 6 | 50 | 290 | 50 | 303 | 3.73e-19 | 86.7 |
| MS.gene85860.t1 | AT4G23430 | 26.667 | 255 | 168 | 5 | 33 | 277 | 29 | 274 | 4.45e-19 | 86.3 |
| MS.gene85860.t1 | AT2G37540 | 39.231 | 130 | 74 | 3 | 36 | 164 | 36 | 161 | 4.50e-18 | 82.8 |
| MS.gene85860.t1 | AT3G59710 | 26.102 | 295 | 177 | 11 | 9 | 276 | 1 | 281 | 2.63e-16 | 78.2 |
| MS.gene85860.t1 | AT5G61830 | 27.875 | 287 | 153 | 9 | 36 | 280 | 39 | 313 | 5.90e-16 | 77.4 |
| MS.gene85860.t1 | AT5G61830 | 27.875 | 287 | 153 | 9 | 36 | 280 | 39 | 313 | 5.90e-16 | 77.4 |
| MS.gene85860.t1 | AT3G59710 | 27.068 | 266 | 160 | 10 | 37 | 275 | 51 | 309 | 2.14e-15 | 75.9 |
| MS.gene85860.t1 | AT3G59710 | 27.341 | 267 | 160 | 11 | 37 | 276 | 32 | 291 | 3.47e-15 | 75.1 |
| MS.gene85860.t1 | AT5G15940 | 28.000 | 275 | 152 | 9 | 36 | 276 | 62 | 324 | 7.82e-15 | 74.7 |
| MS.gene85860.t1 | AT5G15940 | 28.000 | 275 | 152 | 9 | 36 | 276 | 63 | 325 | 8.01e-15 | 74.7 |
| MS.gene85860.t1 | AT5G15940 | 28.000 | 275 | 152 | 9 | 36 | 276 | 63 | 325 | 8.01e-15 | 74.7 |
| MS.gene85860.t1 | AT5G04070 | 27.037 | 270 | 161 | 8 | 36 | 276 | 61 | 323 | 8.13e-14 | 71.6 |
| MS.gene85860.t1 | AT5G15940 | 27.099 | 262 | 147 | 8 | 36 | 263 | 63 | 314 | 1.71e-12 | 67.4 |
| MS.gene85860.t1 | AT4G27760 | 29.834 | 181 | 115 | 5 | 36 | 206 | 60 | 238 | 2.28e-12 | 67.4 |
| MS.gene85860.t1 | AT5G53090 | 26.255 | 259 | 169 | 7 | 36 | 284 | 59 | 305 | 1.14e-11 | 65.5 |
| MS.gene85860.t1 | AT1G01800 | 25.503 | 298 | 152 | 10 | 37 | 279 | 8 | 290 | 5.51e-11 | 62.8 |
Find 76 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCCGAGAGCAGCTTTAA+TGG | 0.263425 | 6.4:-15594724 | MS.gene85860:CDS |
| AGGTTGCACTAACAGAAAAT+TGG | 0.277567 | 6.4:-15593976 | MS.gene85860:CDS |
| CTAATTAATTACAGGCTTGC+AGG | 0.288075 | 6.4:-15593523 | MS.gene85860:intron |
| ATATCAAGTCACTGGCTTCC+AGG | 0.314845 | 6.4:-15595784 | MS.gene85860:CDS |
| CACACATAGGACTGAATATC+TGG | 0.316884 | 6.4:+15597269 | None:intergenic |
| TCGATCCTTGGCATCTCTTT+CGG | 0.317606 | 6.4:-15593326 | MS.gene85860:CDS |
| TCTCAAATTCAGACTAAAAC+TGG | 0.322617 | 6.4:-15596290 | MS.gene85860:CDS |
| AGCATTAAATGAAAGGTGTT+TGG | 0.325335 | 6.4:+15593393 | None:intergenic |
| CACAGTTACCTGTAGATCTT+TGG | 0.325674 | 6.4:+15594816 | None:intergenic |
| CGTGTCATTACTGTTTCTTC+TGG | 0.335143 | 6.4:-15594862 | MS.gene85860:CDS |
| AACTTTGCTGTCAATGTATT+AGG | 0.347400 | 6.4:-15594943 | MS.gene85860:CDS |
| CTATCTTGTATGTCGTAATA+AGG | 0.351461 | 6.4:-15596333 | MS.gene85860:CDS |
| TGAATTGATGGTACCGTTAC+TGG | 0.361549 | 6.4:-15594905 | MS.gene85860:CDS |
| CCAGATACCAACTTCTCCTT+TGG | 0.367870 | 6.4:+15593445 | None:intergenic |
| AAGGCGCGGACACGGTTATC+TGG | 0.368865 | 6.4:-15593480 | MS.gene85860:CDS |
| GGTTGCACTAACAGAAAATT+GGG | 0.372940 | 6.4:-15593975 | MS.gene85860:CDS |
| TTACGCCATGACTGAATTGA+TGG | 0.373220 | 6.4:-15594917 | MS.gene85860:CDS |
| TGCTCGAAACAAGCGTGTTC+AGG | 0.379609 | 6.4:-15594689 | MS.gene85860:intron |
| CATTGATAGTCTTCGATCCT+TGG | 0.381103 | 6.4:-15593338 | MS.gene85860:CDS |
| CCAAAGGAGAAGTTGGTATC+TGG | 0.391733 | 6.4:-15593445 | MS.gene85860:CDS |
| GGGAAGAATTGCATCGTAAC+AGG | 0.397382 | 6.4:-15596504 | MS.gene85860:CDS |
| GCATTAAATGAAAGGTGTTT+GGG | 0.399601 | 6.4:+15593394 | None:intergenic |
| TGCATCAAGGTTAACAATGC+TGG | 0.401264 | 6.4:-15595342 | MS.gene85860:intron |
| ATTCCGAGAGCAGCTTTAAT+GGG | 0.404809 | 6.4:-15594723 | MS.gene85860:CDS |
| ATTTGTGTTTCTGTTTCCTC+TGG | 0.412827 | 6.4:+15596531 | None:intergenic |
| CCAGGTTGGGCTGACACTCC+TGG | 0.413309 | 6.4:-15593908 | MS.gene85860:CDS |
| CAATCAAAATGTGTATTTAG+AGG | 0.414226 | 6.4:-15596267 | MS.gene85860:intron |
| ACAGTAATGACACGTGCATC+AGG | 0.419282 | 6.4:+15594871 | None:intergenic |
| TTACTCGATGCATCCAGGTT+GGG | 0.430651 | 6.4:-15593921 | MS.gene85860:CDS |
| ACAGGAGCAAACTCTGGAAT+TGG | 0.433631 | 6.4:-15596486 | MS.gene85860:CDS |
| AATATCTGGAGCATGAGGTT+TGG | 0.439038 | 6.4:+15597283 | None:intergenic |
| TAATTTACCAACACGTGCAC+TGG | 0.441948 | 6.4:+15595743 | None:intergenic |
| GTCATTACTGTTTCTTCTGG+TGG | 0.452728 | 6.4:-15594859 | MS.gene85860:CDS |
| TCCCTTGACCAAAGATCTAC+AGG | 0.490363 | 6.4:-15594824 | MS.gene85860:intron |
| GTGAAACATACAAGAACAAA+GGG | 0.495041 | 6.4:-15593952 | MS.gene85860:CDS |
| AAGCTTAGAACAAGCGAAGA+AGG | 0.497019 | 6.4:-15593499 | MS.gene85860:CDS |
| TTTACTCGATGCATCCAGGT+TGG | 0.504519 | 6.4:-15593922 | MS.gene85860:CDS |
| ATTGGTTATGCGGCAGCTGA+GGG | 0.522993 | 6.4:-15596468 | MS.gene85860:CDS |
| AATTGGTTATGCGGCAGCTG+AGG | 0.524068 | 6.4:-15596469 | MS.gene85860:CDS |
| GTTACGATGCAATTCTTCCC+TGG | 0.527593 | 6.4:+15596507 | None:intergenic |
| CCAGGAGTGTCAGCCCAACC+TGG | 0.529866 | 6.4:+15593908 | None:intergenic |
| AATCGAGTTACTACATCAGA+AGG | 0.531699 | 6.4:-15595306 | MS.gene85860:CDS |
| CTTGTTTCGAGCATACTGTA+AGG | 0.535266 | 6.4:+15594699 | None:intergenic |
| TGTCAAGGATATCAAGTCAC+TGG | 0.541138 | 6.4:-15595792 | MS.gene85860:CDS |
| CGCGGACACGGTTATCTGGT+TGG | 0.542504 | 6.4:-15593476 | MS.gene85860:CDS |
| ACCTGTAGATCTTTGGTCAA+GGG | 0.546962 | 6.4:+15594823 | None:intergenic |
| CTTTCATTTAATGCTACAAG+TGG | 0.547346 | 6.4:-15593385 | MS.gene85860:CDS |
| TAATTAATTACAGGCTTGCA+GGG | 0.550954 | 6.4:-15593522 | MS.gene85860:intron |
| ACTACAACCAAAGGAGAAGT+TGG | 0.556290 | 6.4:-15593452 | MS.gene85860:CDS |
| TTCTAAGAATTTCAAACCAG+AGG | 0.557905 | 6.4:-15596547 | MS.gene85860:CDS |
| TACCTGTAGATCTTTGGTCA+AGG | 0.568894 | 6.4:+15594822 | None:intergenic |
| GAAACAGAAACACAAATACC+AGG | 0.569965 | 6.4:-15596525 | MS.gene85860:CDS |
| TTGTGATCTGTCATCTGTCA+AGG | 0.571689 | 6.4:-15595807 | MS.gene85860:CDS |
| CACTTGTAGCATTAAATGAA+AGG | 0.577862 | 6.4:+15593386 | None:intergenic |
| ATCGTAACAGGAGCAAACTC+TGG | 0.579578 | 6.4:-15596492 | MS.gene85860:CDS |
| GACTGAATATCTGGAGCATG+AGG | 0.586517 | 6.4:+15597278 | None:intergenic |
| ACATACAAGAACAAAGGGAT+AGG | 0.589492 | 6.4:-15593947 | MS.gene85860:CDS |
| AAGCGAAGAAGGCGCGGACA+CGG | 0.590204 | 6.4:-15593488 | MS.gene85860:CDS |
| TTAAGCCGAAAGAGATGCCA+AGG | 0.597074 | 6.4:+15593321 | None:intergenic |
| CAGTAATGACACGTGCATCA+GGG | 0.598705 | 6.4:+15594872 | None:intergenic |
| CGGTACCATCAATTCAGTCA+TGG | 0.602047 | 6.4:+15594912 | None:intergenic |
| GGGGAAGCTTTCTCCAGTAA+CGG | 0.603395 | 6.4:+15594892 | None:intergenic |
| GGTCCCATTAAAGCTGCTCT+CGG | 0.614033 | 6.4:+15594720 | None:intergenic |
| CTGGTTGGCACTACAACCAA+AGG | 0.614640 | 6.4:-15593461 | MS.gene85860:CDS |
| AGTAATGACACGTGCATCAG+GGG | 0.621348 | 6.4:+15594873 | None:intergenic |
| GAATGTTCCAGTGCACGTGT+TGG | 0.626224 | 6.4:-15595750 | MS.gene85860:intron |
| CAACCCCAAAATATGTGGGT+CGG | 0.629689 | 6.4:-15597310 | None:intergenic |
| GGTGAAACATACAAGAACAA+AGG | 0.631717 | 6.4:-15593953 | MS.gene85860:CDS |
| TCGTAATAAGGAGAGAGGAG+AGG | 0.632019 | 6.4:-15596321 | MS.gene85860:CDS |
| AAACAGAAACACAAATACCA+GGG | 0.633281 | 6.4:-15596524 | MS.gene85860:CDS |
| TAGAACAAGCGAAGAAGGCG+CGG | 0.636188 | 6.4:-15593494 | MS.gene85860:CDS |
| GTATGTCGTAATAAGGAGAG+AGG | 0.651473 | 6.4:-15596326 | MS.gene85860:CDS |
| ATCGAGTTACTACATCAGAA+GGG | 0.664466 | 6.4:-15595305 | MS.gene85860:intron |
| AAACTCTGGAATTGGTTATG+CGG | 0.681764 | 6.4:-15596478 | MS.gene85860:CDS |
| CAGCTGAGGGTCTTGCACAG+CGG | 0.687617 | 6.4:-15596455 | MS.gene85860:intron |
| GTTGCACTAACAGAAAATTG+GGG | 0.760563 | 6.4:-15593974 | MS.gene85860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATAATTCTTAGAATT+TGG | + | chr6.4:15593455-15593474 | None:intergenic | 15.0% |
| !!! | AATTTAAAATAAGAAACTCA+CGG | - | chr6.4:15595113-15595132 | MS.gene85860:intron | 15.0% |
| !!! | AGAATTTTTATTTCAGTATT+TGG | - | chr6.4:15594216-15594235 | MS.gene85860:intron | 15.0% |
| !!! | TTATCTTTTGTTATAAAAAG+AGG | - | chr6.4:15594579-15594598 | MS.gene85860:intron | 15.0% |
| !!! | TTTTGTTTGTTTATTTTGAT+TGG | - | chr6.4:15593799-15593818 | MS.gene85860:intron | 15.0% |
| !! | ATTCTCTTGAAAATCTAATA+TGG | - | chr6.4:15595244-15595263 | MS.gene85860:intron | 20.0% |
| !! | TAAAGTAAGTAAATTCAAAC+AGG | + | chr6.4:15594401-15594420 | None:intergenic | 20.0% |
| !! | TGATTATTAAAACCATTCAT+GGG | - | chr6.4:15596809-15596828 | MS.gene85860:intron | 20.0% |
| !! | TTGATTATTAAAACCATTCA+TGG | - | chr6.4:15596808-15596827 | MS.gene85860:intron | 20.0% |
| !!! | AAAATTCTAGAAACAAACAT+CGG | + | chr6.4:15594204-15594223 | None:intergenic | 20.0% |
| !!! | AATAATCAATAGGTTTTCTA+CGG | + | chr6.4:15596797-15596816 | None:intergenic | 20.0% |
| !!! | ATGCAAATTTTGTGATATAT+TGG | - | chr6.4:15596613-15596632 | MS.gene85860:intron | 20.0% |
| !!! | ATTTAAAATAAGAAACTCAC+GGG | - | chr6.4:15595114-15595133 | MS.gene85860:intron | 20.0% |
| !!! | GAATGGTTTTAATAATCAAT+AGG | + | chr6.4:15596807-15596826 | None:intergenic | 20.0% |
| !!! | GTACTGATATTTTAAATTCA+AGG | - | chr6.4:15595974-15595993 | MS.gene85860:intron | 20.0% |
| !!! | TAAAAAGTCTAATATGCTTT+TGG | + | chr6.4:15594684-15594703 | None:intergenic | 20.0% |
| !!! | TTTATTTTGATTGGTTTTTC+CGG | - | chr6.4:15593808-15593827 | MS.gene85860:intron | 20.0% |
| !!! | TTTTCAAATAGAAACTATAG+AGG | + | chr6.4:15595482-15595501 | None:intergenic | 20.0% |
| !!! | TTTTCACAATTTTGTTGATT+TGG | - | chr6.4:15594737-15594756 | MS.gene85860:intron | 20.0% |
| ! | AGAAGTAATAACAATCAATC+TGG | - | chr6.4:15593713-15593732 | MS.gene85860:intron | 25.0% |
| ! | ATTGACAACATTAGTCATTA+TGG | + | chr6.4:15596231-15596250 | None:intergenic | 25.0% |
| ! | CAACTAACTCAATCATTTAT+AGG | - | chr6.4:15595838-15595857 | MS.gene85860:intron | 25.0% |
| ! | CAATCAAAATGTGTATTTAG+AGG | - | chr6.4:15594352-15594371 | MS.gene85860:intron | 25.0% |
| ! | CACACACATTGTATTTATAA+TGG | - | chr6.4:15593628-15593647 | MS.gene85860:intron | 25.0% |
| ! | GAAGTAATAACAATCAATCT+GGG | - | chr6.4:15593714-15593733 | MS.gene85860:intron | 25.0% |
| ! | GTACATAATCATTAGGATTT+AGG | + | chr6.4:15597072-15597091 | None:intergenic | 25.0% |
| ! | TAACCTCTATTCAAGAAATA+AGG | + | chr6.4:15596528-15596547 | None:intergenic | 25.0% |
| !! | AAAGAAAAGGGAATGAATTT+TGG | + | chr6.4:15593554-15593573 | None:intergenic | 25.0% |
| !! | AATCCTTATTTCTTGAATAG+AGG | - | chr6.4:15596522-15596541 | MS.gene85860:CDS | 25.0% |
| !! | ATTTTAGACACTCAAAGAAA+AGG | + | chr6.4:15593567-15593586 | None:intergenic | 25.0% |
| !! | TTATTTCTTGAATAGAGGTT+AGG | - | chr6.4:15596527-15596546 | MS.gene85860:CDS | 25.0% |
| !! | TTTTAGACACTCAAAGAAAA+GGG | + | chr6.4:15593566-15593585 | None:intergenic | 25.0% |
| !!! | GTATTCGGTTATTTCATTTT+TGG | + | chr6.4:15594985-15595004 | None:intergenic | 25.0% |
| !!! | TAATATGCTTTTGGTAGTTA+CGG | + | chr6.4:15594675-15594694 | None:intergenic | 25.0% |
| AAACAGAAACACAAATACCA+GGG | - | chr6.4:15594095-15594114 | MS.gene85860:intron | 30.0% | |
| AACACAGTAAATGTTGATAC+CGG | + | chr6.4:15593830-15593849 | None:intergenic | 30.0% | |
| AAGAATCTGACTTCAATTCT+TGG | + | chr6.4:15597010-15597029 | None:intergenic | 30.0% | |
| AAGTTTACCTATTCTTGTTC+AGG | - | chr6.4:15595644-15595663 | MS.gene85860:intron | 30.0% | |
| AGATAAGCATCAAGAATTTG+AGG | + | chr6.4:15593494-15593513 | None:intergenic | 30.0% | |
| CAAGGATTATAGTCTCATAA+TGG | + | chr6.4:15596924-15596943 | None:intergenic | 30.0% | |
| CACTTGTAGCATTAAATGAA+AGG | + | chr6.4:15597236-15597255 | None:intergenic | 30.0% | |
| CTATCTTGTATGTCGTAATA+AGG | - | chr6.4:15594286-15594305 | MS.gene85860:intron | 30.0% | |
| CTTATCTTAGAACACAACAT+TGG | - | chr6.4:15593507-15593526 | MS.gene85860:CDS | 30.0% | |
| CTTTCATTTAATGCTACAAG+TGG | - | chr6.4:15597234-15597253 | MS.gene85860:intron | 30.0% | |
| GAAACTGTTTACAGAACATA+TGG | - | chr6.4:15594447-15594466 | MS.gene85860:intron | 30.0% | |
| GTGAAACATACAAGAACAAA+GGG | - | chr6.4:15596667-15596686 | MS.gene85860:intron | 30.0% | |
| TAATTAATTACAGGCTTGCA+GGG | - | chr6.4:15597097-15597116 | MS.gene85860:intron | 30.0% | |
| TAGGTCAGTACATAATCATT+AGG | + | chr6.4:15597079-15597098 | None:intergenic | 30.0% | |
| TATAATCCTTGATTTCGTAG+CGG | - | chr6.4:15596933-15596952 | MS.gene85860:intron | 30.0% | |
| TCTCAAATTCAGACTAAAAC+TGG | - | chr6.4:15594329-15594348 | MS.gene85860:intron | 30.0% | |
| TGGAACAATTTATTGCATCA+AGG | - | chr6.4:15595264-15595283 | MS.gene85860:intron | 30.0% | |
| TTATATGAACTGAGTCATAG+TGG | - | chr6.4:15593466-15593485 | MS.gene85860:CDS | 30.0% | |
| TTGAACAAGTGTTATCGTTT+CGG | + | chr6.4:15595583-15595602 | None:intergenic | 30.0% | |
| TTTGGTTATATGCTAATCTG+TGG | - | chr6.4:15594234-15594253 | MS.gene85860:intron | 30.0% | |
| ! | AAAGGGAATGAATTTTGGAT+TGG | + | chr6.4:15593549-15593568 | None:intergenic | 30.0% |
| ! | AACATTCTTTTCAGAAAACC+TGG | + | chr6.4:15594856-15594875 | None:intergenic | 30.0% |
| ! | AACTTTGCTGTCAATGTATT+AGG | - | chr6.4:15595676-15595695 | MS.gene85860:intron | 30.0% |
| ! | GTACTGACCTAATTAATTAC+AGG | - | chr6.4:15597088-15597107 | MS.gene85860:intron | 30.0% |
| ! | TATTGCCACCAATTCTTTTA+GGG | - | chr6.4:15594375-15594394 | MS.gene85860:intron | 30.0% |
| ! | TTCTAAGAATTTCAAACCAG+AGG | - | chr6.4:15594072-15594091 | MS.gene85860:intron | 30.0% |
| !! | AGCATTAAATGAAAGGTGTT+TGG | + | chr6.4:15597229-15597248 | None:intergenic | 30.0% |
| !! | GCATTAAATGAAAGGTGTTT+GGG | + | chr6.4:15597228-15597247 | None:intergenic | 30.0% |
| AATCGAGTTACTACATCAGA+AGG | - | chr6.4:15595313-15595332 | MS.gene85860:CDS | 35.0% | |
| AATTCTTGGAGTCGTGTATT+TGG | + | chr6.4:15596996-15597015 | None:intergenic | 35.0% | |
| ACAAAAAAATCGCATCGTAG+TGG | - | chr6.4:15596178-15596197 | MS.gene85860:intron | 35.0% | |
| ACATACAAGAACAAAGGGAT+AGG | - | chr6.4:15596672-15596691 | MS.gene85860:intron | 35.0% | |
| ACATTATCCTAGAGAGCTTA+TGG | + | chr6.4:15594518-15594537 | None:intergenic | 35.0% | |
| ACTCAAACCTGAACAAGAAT+AGG | + | chr6.4:15595654-15595673 | None:intergenic | 35.0% | |
| AGAAACAAACATCGGAAGAA+AGG | + | chr6.4:15594196-15594215 | None:intergenic | 35.0% | |
| AGAAGCTTACGAGATTGAAT+TGG | - | chr6.4:15593904-15593923 | MS.gene85860:CDS | 35.0% | |
| AGGTTGCACTAACAGAAAAT+TGG | - | chr6.4:15596643-15596662 | MS.gene85860:intron | 35.0% | |
| ATAATCCTTGATTTCGTAGC+GGG | - | chr6.4:15596934-15596953 | MS.gene85860:intron | 35.0% | |
| ATCGAGTTACTACATCAGAA+GGG | - | chr6.4:15595314-15595333 | MS.gene85860:CDS | 35.0% | |
| ATTCTTGGAGTCGTGTATTT+GGG | + | chr6.4:15596995-15597014 | None:intergenic | 35.0% | |
| CAGTTATAGCCATGAAACTA+GGG | + | chr6.4:15593943-15593962 | None:intergenic | 35.0% | |
| CATCAATAGCTATGAAACAC+TGG | + | chr6.4:15596110-15596129 | None:intergenic | 35.0% | |
| CTAATTAATTACAGGCTTGC+AGG | - | chr6.4:15597096-15597115 | MS.gene85860:intron | 35.0% | |
| CTCAAATTATGTTGACGTGT+CGG | - | chr6.4:15596058-15596077 | MS.gene85860:intron | 35.0% | |
| CTGCAAGCCTGTAATTAATT+AGG | + | chr6.4:15597098-15597117 | None:intergenic | 35.0% | |
| GAAACAGAAACACAAATACC+AGG | - | chr6.4:15594094-15594113 | MS.gene85860:intron | 35.0% | |
| GGTGAAACATACAAGAACAA+AGG | - | chr6.4:15596666-15596685 | MS.gene85860:intron | 35.0% | |
| GGTTGCACTAACAGAAAATT+GGG | - | chr6.4:15596644-15596663 | MS.gene85860:intron | 35.0% | |
| GTTGCACTAACAGAAAATTG+GGG | - | chr6.4:15596645-15596664 | MS.gene85860:intron | 35.0% | |
| TGTGATATATTGGAAATGCC+AGG | - | chr6.4:15596623-15596642 | MS.gene85860:intron | 35.0% | |
| TTGAATAGAGGTTAGGACTT+GGG | - | chr6.4:15596534-15596553 | MS.gene85860:CDS | 35.0% | |
| TTGTATCACTATTCAGTCAC+AGG | + | chr6.4:15596291-15596310 | None:intergenic | 35.0% | |
| ! | AATCGGATTCTAAGAATGCA+TGG | - | chr6.4:15593383-15593402 | MS.gene85860:CDS | 35.0% |
| ! | AATTTTCTGTTAGTGCAACC+TGG | + | chr6.4:15596644-15596663 | None:intergenic | 35.0% |
| ! | ATTTGTGTTTCTGTTTCCTC+TGG | + | chr6.4:15594091-15594110 | None:intergenic | 35.0% |
| ! | GGACTTTTGTATCTTGCTTT+TGG | - | chr6.4:15595135-15595154 | MS.gene85860:intron | 35.0% |
| ! | GTATTGCCACCAATTCTTTT+AGG | - | chr6.4:15594374-15594393 | MS.gene85860:intron | 35.0% |
| ! | GTTTTCTACGGATGATGTTA+AGG | + | chr6.4:15596785-15596804 | None:intergenic | 35.0% |
| ! | TAATTAGTAAGCACTAGCCT+AGG | - | chr6.4:15593676-15593695 | MS.gene85860:intron | 35.0% |
| ! | TCTAGAGTATACAACTTCCT+AGG | + | chr6.4:15593696-15593715 | None:intergenic | 35.0% |
| ! | TGAAGTCAGATTCTTTTCGT+GGG | - | chr6.4:15597015-15597034 | MS.gene85860:intron | 35.0% |
| ! | TTGAAGTCAGATTCTTTTCG+TGG | - | chr6.4:15597014-15597033 | MS.gene85860:intron | 35.0% |
| !! | AAACTCTGGAATTGGTTATG+CGG | - | chr6.4:15594141-15594160 | MS.gene85860:intron | 35.0% |
| !! | AGTCTCATAATGGACTCAAA+GGG | + | chr6.4:15596914-15596933 | None:intergenic | 35.0% |
| !! | CATGTGACTTTTATTTCGTG+GGG | - | chr6.4:15596958-15596977 | MS.gene85860:intron | 35.0% |
| !! | GCATGTGACTTTTATTTCGT+GGG | - | chr6.4:15596957-15596976 | MS.gene85860:intron | 35.0% |
| !! | TAGTCTCATAATGGACTCAA+AGG | + | chr6.4:15596915-15596934 | None:intergenic | 35.0% |
| AAGATAGACATTTGCACCAC+TGG | + | chr6.4:15594273-15594292 | None:intergenic | 40.0% | |
| AAGCCTTAGGAGACTAATTG+AGG | - | chr6.4:15596383-15596402 | MS.gene85860:intron | 40.0% | |
| AAGCTTAGAACAAGCGAAGA+AGG | - | chr6.4:15597120-15597139 | MS.gene85860:intron | 40.0% | |
| ACCTGTAGATCTTTGGTCAA+GGG | + | chr6.4:15595799-15595818 | None:intergenic | 40.0% | |
| ACTACAACCAAAGGAGAAGT+TGG | - | chr6.4:15597167-15597186 | MS.gene85860:intron | 40.0% | |
| ATAGCTATGAAACACTGGCA+CGG | + | chr6.4:15596105-15596124 | None:intergenic | 40.0% | |
| ATGAAACACTAACACAGACG+CGG | - | chr6.4:15594927-15594946 | MS.gene85860:CDS | 40.0% | |
| CAAACAGGCCCTAAAAGAAT+TGG | + | chr6.4:15594386-15594405 | None:intergenic | 40.0% | |
| CACACATAGGACTGAATATC+TGG | + | chr6.4:15593353-15593372 | None:intergenic | 40.0% | |
| CACAGTTACCTGTAGATCTT+TGG | + | chr6.4:15595806-15595825 | None:intergenic | 40.0% | |
| CCCTTCCTACATTTGTAACT+CGG | + | chr6.4:15596455-15596474 | None:intergenic | 40.0% | |
| CCGAGTTACAAATGTAGGAA+GGG | - | chr6.4:15596452-15596471 | MS.gene85860:intron | 40.0% | |
| CCTAGAGAGCTTATGGAAAT+CGG | + | chr6.4:15594511-15594530 | None:intergenic | 40.0% | |
| CCTTCCTACATTTGTAACTC+GGG | + | chr6.4:15596454-15596473 | None:intergenic | 40.0% | |
| CGAGTTACAAATGTAGGAAG+GGG | - | chr6.4:15596453-15596472 | MS.gene85860:intron | 40.0% | |
| CGATTTAGGCTAAAGCATAG+CGG | + | chr6.4:15595554-15595573 | None:intergenic | 40.0% | |
| CTATGTCGTGGGATACTTTA+GGG | + | chr6.4:15596890-15596909 | None:intergenic | 40.0% | |
| CTTCCTACATTTGTAACTCG+GGG | + | chr6.4:15596453-15596472 | None:intergenic | 40.0% | |
| CTTGAATAGAGGTTAGGACT+TGG | - | chr6.4:15596533-15596552 | MS.gene85860:CDS | 40.0% | |
| CTTGTTTCGAGCATACTGTA+AGG | + | chr6.4:15595923-15595942 | None:intergenic | 40.0% | |
| GATTTAGGCTAAAGCATAGC+GGG | + | chr6.4:15595553-15595572 | None:intergenic | 40.0% | |
| GCAGTTATAGCCATGAAACT+AGG | + | chr6.4:15593944-15593963 | None:intergenic | 40.0% | |
| GTATGTCGTAATAAGGAGAG+AGG | - | chr6.4:15594293-15594312 | MS.gene85860:intron | 40.0% | |
| TAATCCTTGATTTCGTAGCG+GGG | - | chr6.4:15596935-15596954 | MS.gene85860:intron | 40.0% | |
| TAATTTACCAACACGTGCAC+TGG | + | chr6.4:15594879-15594898 | None:intergenic | 40.0% | |
| TACCTGTAGATCTTTGGTCA+AGG | + | chr6.4:15595800-15595819 | None:intergenic | 40.0% | |
| TATTCAGTCCTATGTGTGTG+AGG | - | chr6.4:15593355-15593374 | MS.gene85860:CDS | 40.0% | |
| TCTATGTCGTGGGATACTTT+AGG | + | chr6.4:15596891-15596910 | None:intergenic | 40.0% | |
| TGCATCAAGGTTAACAATGC+TGG | - | chr6.4:15595277-15595296 | MS.gene85860:intron | 40.0% | |
| TGTCAAGGATATCAAGTCAC+TGG | - | chr6.4:15594827-15594846 | MS.gene85860:CDS | 40.0% | |
| TTACGCCATGACTGAATTGA+TGG | - | chr6.4:15595702-15595721 | MS.gene85860:intron | 40.0% | |
| TTCCTACATTTGTAACTCGG+GGG | + | chr6.4:15596452-15596471 | None:intergenic | 40.0% | |
| TTCCTCTATTCTACCTGTAG+TGG | - | chr6.4:15595370-15595389 | MS.gene85860:intron | 40.0% | |
| TTGTGATCTGTCATCTGTCA+AGG | - | chr6.4:15594812-15594831 | MS.gene85860:intron | 40.0% | |
| TTGTTTCGCGAAACACGATT+TGG | + | chr6.4:15595514-15595533 | None:intergenic | 40.0% | |
| ! | AATATCTGGAGCATGAGGTT+TGG | + | chr6.4:15593339-15593358 | None:intergenic | 40.0% |
| ! | ATTCCGAGAGCAGCTTTAAT+GGG | - | chr6.4:15595896-15595915 | MS.gene85860:intron | 40.0% |
| ! | CAACCTCAATTAGTCTCCTA+AGG | + | chr6.4:15596389-15596408 | None:intergenic | 40.0% |
| ! | CATTGATAGTCTTCGATCCT+TGG | - | chr6.4:15597281-15597300 | MS.gene85860:CDS | 40.0% |
| ! | CGTGTCATTACTGTTTCTTC+TGG | - | chr6.4:15595757-15595776 | MS.gene85860:CDS | 40.0% |
| ! | CTTCAGATTAAAAGCGCGTT+CGG | + | chr6.4:15595049-15595068 | None:intergenic | 40.0% |
| ! | GAAGTCAGATTCTTTTCGTG+GGG | - | chr6.4:15597016-15597035 | MS.gene85860:intron | 40.0% |
| ! | GTCATTACTGTTTCTTCTGG+TGG | - | chr6.4:15595760-15595779 | MS.gene85860:CDS | 40.0% |
| ! | TATTCCGAGAGCAGCTTTAA+TGG | - | chr6.4:15595895-15595914 | MS.gene85860:intron | 40.0% |
| ! | TCAATTAGTCTCCTAAGGCT+TGG | + | chr6.4:15596384-15596403 | None:intergenic | 40.0% |
| ! | TGAATTGATGGTACCGTTAC+TGG | - | chr6.4:15595714-15595733 | MS.gene85860:intron | 40.0% |
| !! | ACTTACGATTTTGAGAAGCC+TGG | + | chr6.4:15596753-15596772 | None:intergenic | 40.0% |
| !! | AGAGCAGTTTTGTCTGATAG+TGG | + | chr6.4:15595623-15595642 | None:intergenic | 40.0% |
| !! | GCGCTTTTAATCTGAAGTGT+CGG | - | chr6.4:15595052-15595071 | MS.gene85860:intron | 40.0% |
| !! | GGCATGTGACTTTTATTTCG+TGG | - | chr6.4:15596956-15596975 | MS.gene85860:intron | 40.0% |
| !! | TGACTTTTATTTCGTGGGGA+TGG | - | chr6.4:15596962-15596981 | MS.gene85860:intron | 40.0% |
| !! | TTGGTAGTTACGGTCTTGTT+TGG | + | chr6.4:15594665-15594684 | None:intergenic | 40.0% |
| ACAGGCCCTAAAAGAATTGG+TGG | + | chr6.4:15594383-15594402 | None:intergenic | 45.0% | |
| ACAGTAATGACACGTGCATC+AGG | + | chr6.4:15595751-15595770 | None:intergenic | 45.0% | |
| ACTCAAAGGGTCTATGTCGT+GGG | + | chr6.4:15596901-15596920 | None:intergenic | 45.0% | |
| AGACGCTTTCTTCCCATGAA+TGG | + | chr6.4:15596824-15596843 | None:intergenic | 45.0% | |
| AGCAGATCAATGACCACTAC+AGG | + | chr6.4:15595386-15595405 | None:intergenic | 45.0% | |
| AGTAATGACACGTGCATCAG+GGG | + | chr6.4:15595749-15595768 | None:intergenic | 45.0% | |
| ATCGTAACAGGAGCAAACTC+TGG | - | chr6.4:15594127-15594146 | MS.gene85860:intron | 45.0% | |
| ATGTGTGTGAGGTGGTGAAT+CGG | - | chr6.4:15593366-15593385 | MS.gene85860:CDS | 45.0% | |
| ATTCACCACCTCACACACAT+AGG | + | chr6.4:15593366-15593385 | None:intergenic | 45.0% | |
| CAGTAATGACACGTGCATCA+GGG | + | chr6.4:15595750-15595769 | None:intergenic | 45.0% | |
| CCAAAAGCTAGATTGTGGGA+GGG | + | chr6.4:15593413-15593432 | None:intergenic | 45.0% | |
| CCAACACGTGTGGTTGTATT+CGG | + | chr6.4:15595000-15595019 | None:intergenic | 45.0% | |
| CCAGATACCAACTTCTCCTT+TGG | + | chr6.4:15597177-15597196 | None:intergenic | 45.0% | |
| CCCGAGTTACAAATGTAGGA+AGG | - | chr6.4:15596451-15596470 | MS.gene85860:intron | 45.0% | |
| CCGATTTCCATAAGCTCTCT+AGG | - | chr6.4:15594508-15594527 | MS.gene85860:intron | 45.0% | |
| CGGTACCATCAATTCAGTCA+TGG | + | chr6.4:15595710-15595729 | None:intergenic | 45.0% | |
| GACCACTACAGGTAGAATAG+AGG | + | chr6.4:15595375-15595394 | None:intergenic | 45.0% | |
| GACCCCAAAAGCTAGATTGT+GGG | + | chr6.4:15593417-15593436 | None:intergenic | 45.0% | |
| GGAAGGGGTTTAAATTGTGC+AGG | - | chr6.4:15596468-15596487 | MS.gene85860:CDS | 45.0% | |
| GGGAAGAATTGCATCGTAAC+AGG | - | chr6.4:15594115-15594134 | MS.gene85860:intron | 45.0% | |
| GTAACCATCTGTGTCAGTGT+CGG | + | chr6.4:15596020-15596039 | None:intergenic | 45.0% | |
| GTTAAACCAAGCCAAGCCTT+AGG | - | chr6.4:15596370-15596389 | MS.gene85860:intron | 45.0% | |
| GTTACGATGCAATTCTTCCC+TGG | + | chr6.4:15594115-15594134 | None:intergenic | 45.0% | |
| TAAAGCTGCTCTCGGAATAC+TGG | + | chr6.4:15595894-15595913 | None:intergenic | 45.0% | |
| TCCCTTGACCAAAGATCTAC+AGG | - | chr6.4:15595795-15595814 | MS.gene85860:CDS | 45.0% | |
| TCGATCCTTGGCATCTCTTT+CGG | - | chr6.4:15597293-15597312 | MS.gene85860:CDS | 45.0% | |
| TCGTAATAAGGAGAGAGGAG+AGG | - | chr6.4:15594298-15594317 | MS.gene85860:intron | 45.0% | |
| TGTGACTGACCCTAGTTTCA+TGG | - | chr6.4:15593931-15593950 | MS.gene85860:CDS | 45.0% | |
| TTAAGCCGAAAGAGATGCCA+AGG | + | chr6.4:15597301-15597320 | None:intergenic | 45.0% | |
| TTACTCGATGCATCCAGGTT+GGG | - | chr6.4:15596698-15596717 | MS.gene85860:intron | 45.0% | |
| TTCCCCCGAGTTACAAATGT+AGG | - | chr6.4:15596447-15596466 | MS.gene85860:intron | 45.0% | |
| TTTACTCGATGCATCCAGGT+TGG | - | chr6.4:15596697-15596716 | MS.gene85860:intron | 45.0% | |
| ! | CGTTTCGGAAAGCACGATTT+AGG | + | chr6.4:15595568-15595587 | None:intergenic | 45.0% |
| ! | GACTGAATATCTGGAGCATG+AGG | + | chr6.4:15593344-15593363 | None:intergenic | 45.0% |
| ! | GATAGTGGCTAAAGCATAGC+AGG | + | chr6.4:15595608-15595627 | None:intergenic | 45.0% |
| ! | GGATTTTACTCGATGCATCC+AGG | - | chr6.4:15596693-15596712 | MS.gene85860:intron | 45.0% |
| ! | GGCAAACTTTTTGCAACACC+AGG | + | chr6.4:15596732-15596751 | None:intergenic | 45.0% |
| ! | GGTGTTGCAAAAAGTTTGCC+AGG | - | chr6.4:15596732-15596751 | MS.gene85860:intron | 45.0% |
| ! | TCAGATTCTTTTCGTGGGGA+TGG | - | chr6.4:15597020-15597039 | MS.gene85860:intron | 45.0% |
| ! | TGGTTAGTGATTTTCGCCAG+TGG | - | chr6.4:15594254-15594273 | MS.gene85860:intron | 45.0% |
| !! | ACAGGAGCAAACTCTGGAAT+TGG | - | chr6.4:15594133-15594152 | MS.gene85860:intron | 45.0% |
| !! | ATATCAAGTCACTGGCTTCC+AGG | - | chr6.4:15594835-15594854 | MS.gene85860:CDS | 45.0% |
| !! | CCAAAGGAGAAGTTGGTATC+TGG | - | chr6.4:15597174-15597193 | MS.gene85860:intron | 45.0% |
| !!! | CCTCCCACAATCTAGCTTTT+GGG | - | chr6.4:15593411-15593430 | MS.gene85860:CDS | 45.0% |
| !!! | CTCCCACAATCTAGCTTTTG+GGG | - | chr6.4:15593412-15593431 | MS.gene85860:CDS | 45.0% |
| !!! | TTTTGGTGTCGACGTGTAAG+TGG | + | chr6.4:15594968-15594987 | None:intergenic | 45.0% |
| AATTGGTTATGCGGCAGCTG+AGG | - | chr6.4:15594150-15594169 | MS.gene85860:intron | 50.0% | |
| ATTGGTTATGCGGCAGCTGA+GGG | - | chr6.4:15594151-15594170 | MS.gene85860:intron | 50.0% | |
| CCCAAAAGCTAGATTGTGGG+AGG | + | chr6.4:15593414-15593433 | None:intergenic | 50.0% | |
| CCGAATACAACCACACGTGT+TGG | - | chr6.4:15594997-15595016 | MS.gene85860:intron | 50.0% | |
| CGACCCCAAAAGCTAGATTG+TGG | + | chr6.4:15593418-15593437 | None:intergenic | 50.0% | |
| CTGGTTGGCACTACAACCAA+AGG | - | chr6.4:15597158-15597177 | MS.gene85860:intron | 50.0% | |
| CTTGGAGTCGTGTATTTGGG+AGG | + | chr6.4:15596992-15597011 | None:intergenic | 50.0% | |
| GAATGTTCCAGTGCACGTGT+TGG | - | chr6.4:15594869-15594888 | MS.gene85860:CDS | 50.0% | |
| GACTCAAAGGGTCTATGTCG+TGG | + | chr6.4:15596902-15596921 | None:intergenic | 50.0% | |
| GGGGAAGCTTTCTCCAGTAA+CGG | + | chr6.4:15595730-15595749 | None:intergenic | 50.0% | |
| GGTCCCATTAAAGCTGCTCT+CGG | + | chr6.4:15595902-15595921 | None:intergenic | 50.0% | |
| GTATCCGACACTGACACAGA+TGG | - | chr6.4:15596013-15596032 | MS.gene85860:intron | 50.0% | |
| TAGAACAAGCGAAGAAGGCG+CGG | - | chr6.4:15597125-15597144 | MS.gene85860:intron | 50.0% | |
| TAGTCTCCTAAGGCTTGGCT+TGG | + | chr6.4:15596379-15596398 | None:intergenic | 50.0% | |
| TCAGTCCTATGTGTGTGAGG+TGG | - | chr6.4:15593358-15593377 | MS.gene85860:CDS | 50.0% | |
| TGCTCGAAACAAGCGTGTTC+AGG | - | chr6.4:15595930-15595949 | MS.gene85860:intron | 50.0% | |
| ! | ACAACCACACGTGTTGGTCT+TGG | - | chr6.4:15595003-15595022 | MS.gene85860:intron | 50.0% |
| ! | AGTGTCGGATACTCGGATAC+TGG | + | chr6.4:15596005-15596024 | None:intergenic | 50.0% |
| ! | CTGTGTCAGTGTCGGATACT+CGG | + | chr6.4:15596012-15596031 | None:intergenic | 50.0% |
| ! | TTAGGATTTAGGACCACCCC+TGG | + | chr6.4:15597061-15597080 | None:intergenic | 50.0% |
| !!! | CCCTCCCACAATCTAGCTTT+TGG | - | chr6.4:15593410-15593429 | MS.gene85860:CDS | 50.0% |
| CATGCCCCGCTACGAAATCA+AGG | + | chr6.4:15596942-15596961 | None:intergenic | 55.0% | |
| GGTCTACCTCCCACTTACCA+GGG | - | chr6.4:15597041-15597060 | MS.gene85860:intron | 55.0% | |
| GTAACTCGGGGGAATCTTCG+AGG | + | chr6.4:15596441-15596460 | None:intergenic | 55.0% | |
| GTCTACCTCCCACTTACCAG+GGG | - | chr6.4:15597042-15597061 | MS.gene85860:intron | 55.0% | |
| GTGTCCAAGACCAACACGTG+TGG | + | chr6.4:15595010-15595029 | None:intergenic | 55.0% | |
| TAGGACCACCCCTGGTAAGT+GGG | + | chr6.4:15597053-15597072 | None:intergenic | 55.0% | |
| TGGTCTACCTCCCACTTACC+AGG | - | chr6.4:15597040-15597059 | MS.gene85860:intron | 55.0% | |
| TTAGGACCACCCCTGGTAAG+TGG | + | chr6.4:15597054-15597073 | None:intergenic | 55.0% | |
| AAGGCGCGGACACGGTTATC+TGG | - | chr6.4:15597139-15597158 | MS.gene85860:intron | 60.0% | |
| CAGCTGAGGGTCTTGCACAG+CGG | - | chr6.4:15594164-15594183 | MS.gene85860:intron | 60.0% | |
| CGCGGACACGGTTATCTGGT+TGG | - | chr6.4:15597143-15597162 | MS.gene85860:intron | 60.0% | |
| TACCTCCCACTTACCAGGGG+TGG | - | chr6.4:15597045-15597064 | MS.gene85860:intron | 60.0% | |
| ! | AAGCGAAGAAGGCGCGGACA+CGG | - | chr6.4:15597131-15597150 | MS.gene85860:intron | 60.0% |
| GACCACCCCTGGTAAGTGGG+AGG | + | chr6.4:15597050-15597069 | None:intergenic | 65.0% | |
| ! | CCAGGTTGGGCTGACACTCC+TGG | - | chr6.4:15596711-15596730 | MS.gene85860:intron | 65.0% |
| !! | CCAGGAGTGTCAGCCCAACC+TGG | + | chr6.4:15596714-15596733 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 15593321 | 15597320 | 15593321 | ID=MS.gene85860 |
| chr6.4 | mRNA | 15593321 | 15597320 | 15593321 | ID=MS.gene85860.t1;Parent=MS.gene85860 |
| chr6.4 | exon | 15597274 | 15597320 | 15597274 | ID=MS.gene85860.t1.exon1;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15597274 | 15597320 | 15597274 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15596456 | 15596575 | 15596456 | ID=MS.gene85860.t1.exon2;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15596456 | 15596575 | 15596456 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15596268 | 15596367 | 15596268 | ID=MS.gene85860.t1.exon3;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15596268 | 15596367 | 15596268 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15595751 | 15595831 | 15595751 | ID=MS.gene85860.t1.exon4;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15595751 | 15595831 | 15595751 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15595306 | 15595355 | 15595306 | ID=MS.gene85860.t1.exon5;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15595306 | 15595355 | 15595306 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15594825 | 15594975 | 15594825 | ID=MS.gene85860.t1.exon6;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15594825 | 15594975 | 15594825 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15594690 | 15594746 | 15594690 | ID=MS.gene85860.t1.exon7;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15594690 | 15594746 | 15594690 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15593875 | 15593996 | 15593875 | ID=MS.gene85860.t1.exon8;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15593875 | 15593996 | 15593875 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| chr6.4 | exon | 15593321 | 15593531 | 15593321 | ID=MS.gene85860.t1.exon9;Parent=MS.gene85860.t1 |
| chr6.4 | CDS | 15593321 | 15593531 | 15593321 | ID=cds.MS.gene85860.t1;Parent=MS.gene85860.t1 |
| Gene Sequence |
| Protein sequence |
