AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42548


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42548.t1 MTR_7g091140 75.977 870 134 3 1 796 1 869 0.0 1261
MS.gene42548.t1 MTR_7g091140 72.581 310 74 1 446 755 1093 1391 1.51e-140 449
MS.gene42548.t1 MTR_7g491180 76.798 862 125 3 1 788 1 861 0.0 1250
MS.gene42548.t1 MTR_7g091190 76.798 862 125 3 1 788 1 861 0.0 1250
MS.gene42548.t1 MTR_7g091110 71.494 870 150 6 1 795 1 847 0.0 1152
MS.gene42548.t1 MTR_7g091110 59.649 57 23 0 569 625 860 916 4.86e-12 70.1
MS.gene42548.t1 MTR_1g047910 61.468 872 252 6 1 793 1 867 0.0 998
MS.gene42548.t1 MTR_7g091550 59.812 851 258 7 1 773 3 847 0.0 971
MS.gene42548.t1 MTR_7g091550 53.086 405 110 5 86 414 921 1321 2.98e-115 380
MS.gene42548.t1 MTR_7g091200 58.810 874 245 11 1 795 1 838 0.0 943
MS.gene42548.t1 MTR_7g491190 58.962 848 266 12 1 795 1 819 0.0 935
MS.gene42548.t1 MTR_2g062360 56.683 621 198 5 226 795 3 603 0.0 656
MS.gene42548.t1 MTR_5g076840 42.890 865 401 11 1 786 1 851 0.0 649
MS.gene42548.t1 MTR_7g078300 43.563 870 397 9 1 794 1 852 0.0 647
MS.gene42548.t1 MTR_4g119195 43.995 866 389 12 1 788 1 848 0.0 647
MS.gene42548.t1 MTR_1g078490 42.824 871 398 9 1 795 1 847 0.0 647
MS.gene42548.t1 MTR_4g119195 44.121 791 349 11 1 713 1 776 0.0 593
MS.gene42548.t1 MTR_7g078640 41.264 870 384 11 1 794 1 819 0.0 590
MS.gene42548.t1 MTR_4g119140 40.072 836 331 18 1 789 1 713 1.07e-171 512
MS.gene42548.t1 MTR_7g078630 40.028 727 289 15 74 748 8 639 2.51e-137 430
MS.gene42548.t1 MTR_4g094540 31.685 890 463 16 4 788 3 852 5.50e-126 398
MS.gene42548.t1 MTR_7g084790 45.472 530 155 6 204 684 8 452 5.16e-123 377
MS.gene42548.t1 MTR_1g047870 48.341 422 152 8 216 574 3 421 3.18e-108 339
MS.gene42548.t1 MTR_1g047870 62.617 107 40 0 688 794 345 451 2.45e-36 143
MS.gene42548.t1 MTR_7g091570 65.844 243 55 2 1 215 1 243 4.17e-99 308
MS.gene42548.t1 MTR_8g445980 31.078 872 440 27 26 789 24 842 1.95e-95 317
MS.gene42548.t1 MTR_3g015500 29.863 874 446 22 9 788 42 842 1.01e-92 310
MS.gene42548.t1 MTR_3g015560 29.696 889 464 27 9 788 4 840 6.40e-90 302
MS.gene42548.t1 MTR_4g050790 30.106 847 443 22 9 755 4 801 9.86e-90 300
MS.gene42548.t1 MTR_8g011550 27.640 966 481 32 1 786 1 928 2.87e-85 291
MS.gene42548.t1 MTR_7g091560 46.313 339 117 3 416 754 8 281 1.06e-84 271
MS.gene42548.t1 MTR_4g021690 32.544 676 343 16 1 591 1 648 2.04e-84 290
MS.gene42548.t1 MTR_3g015550 29.647 877 438 24 9 765 4 821 5.62e-83 283
MS.gene42548.t1 MTR_3g015550 29.592 882 442 24 4 765 36 858 1.07e-82 283
MS.gene42548.t1 MTR_7g013560 29.917 839 445 29 1 746 1 789 3.12e-80 278
MS.gene42548.t1 MTR_3g015280 31.571 662 333 14 8 584 3 629 7.63e-80 273
MS.gene42548.t1 MTR_8g011180 27.726 963 493 29 1 789 1 934 3.08e-79 274
MS.gene42548.t1 MTR_4g022960 32.669 652 343 18 1 592 1 616 5.15e-79 274
MS.gene42548.t1 MTR_1g047920 57.741 239 84 4 574 795 2 240 2.85e-78 253
MS.gene42548.t1 MTR_8g011170 28.051 934 485 27 1 786 1 895 3.82e-78 271
MS.gene42548.t1 MTR_5g034770 26.603 936 476 28 1 786 1 875 1.37e-77 271
MS.gene42548.t1 MTR_0065s0100 26.996 952 495 27 1 795 1 909 3.36e-77 268
MS.gene42548.t1 MTR_8g027540 26.768 990 486 27 1 786 1 955 4.89e-77 269
MS.gene42548.t1 MTR_8g010440 29.207 832 458 24 1 746 1 787 8.35e-77 268
MS.gene42548.t1 MTR_2g078070 27.875 861 450 23 1 735 1 816 4.36e-75 265
MS.gene42548.t1 MTR_4g022480 31.933 714 344 21 1 601 1 685 1.10e-74 263
MS.gene42548.t1 MTR_4g022460 31.798 673 345 19 1 588 1 644 1.78e-74 262
MS.gene42548.t1 MTR_4g022560 31.905 677 340 20 1 588 1 645 1.88e-74 262
MS.gene42548.t1 MTR_7g091090 46.765 340 83 7 152 414 17 335 9.24e-73 241
MS.gene42548.t1 MTR_4g022540 31.437 668 350 16 1 588 1 640 3.33e-71 253
MS.gene42548.t1 MTR_8g011300 29.032 837 431 24 1 720 1 791 1.43e-70 250
MS.gene42548.t1 MTR_3g026660 28.926 726 368 19 1 623 1 681 2.37e-68 245
MS.gene42548.t1 MTR_3g026660 33.333 162 101 2 630 788 922 1079 2.89e-17 87.4
MS.gene42548.t1 MTR_5g035480 28.261 874 450 34 1 775 1 796 4.34e-67 241
MS.gene42548.t1 MTR_5g035480 33.125 160 101 3 628 784 840 996 3.25e-17 87.0
MS.gene42548.t1 MTR_6g452490 28.277 824 474 19 1 746 1 785 9.18e-67 239
MS.gene42548.t1 MTR_3g026660 27.706 776 370 22 1 623 1 738 2.23e-66 240
MS.gene42548.t1 MTR_3g026660 33.333 162 101 2 630 788 979 1136 3.31e-17 87.0
MS.gene42548.t1 MTR_8g011590 28.074 862 398 26 119 789 1 831 1.68e-65 234
MS.gene42548.t1 MTR_6g016430 29.161 703 332 22 12 592 11 669 3.62e-65 236
MS.gene42548.t1 MTR_5g035240 28.070 855 459 29 1 760 1 794 5.47e-65 234
MS.gene42548.t1 MTR_5g037450 29.018 703 356 21 1 592 1 671 1.55e-64 234
MS.gene42548.t1 MTR_5g037450 27.372 274 183 7 527 789 832 1100 2.36e-18 90.9
MS.gene42548.t1 MTR_1g030770 27.543 806 435 23 1 720 1 743 1.84e-63 230
MS.gene42548.t1 MTR_5g037500 30.781 679 367 21 1 623 1 632 1.03e-62 228
MS.gene42548.t1 MTR_5g037500 33.582 134 85 2 655 788 853 982 9.61e-13 72.8
MS.gene42548.t1 MTR_8g037220 25.351 998 494 26 1 786 1001 1959 2.12e-62 229
MS.gene42548.t1 MTR_8g037220 25.351 998 494 26 1 786 780 1738 2.51e-62 229
MS.gene42548.t1 MTR_8g038590 27.015 670 376 14 41 620 47 693 3.43e-59 219
MS.gene42548.t1 MTR_8g011280 26.196 836 399 22 154 790 20 836 6.37e-59 215
MS.gene42548.t1 MTR_6g046480 26.142 876 501 30 9 780 1 834 2.82e-58 216
MS.gene42548.t1 MTR_6g046480 29.688 192 123 4 604 789 894 1079 1.58e-12 72.0
MS.gene42548.t1 MTR_3g435740 28.591 717 385 20 32 666 83 754 5.19e-58 215
MS.gene42548.t1 MTR_3g086070 29.624 665 348 22 13 599 9 631 1.42e-57 214
MS.gene42548.t1 MTR_3g086070 29.319 191 123 5 604 789 908 1091 1.22e-13 75.5
MS.gene42548.t1 MTR_1g047800 27.968 758 397 26 9 668 6 712 1.50e-57 213
MS.gene42548.t1 MTR_8g043600 30.328 610 271 20 43 572 21 556 3.40e-57 205
MS.gene42548.t1 MTR_5g035280 28.716 693 361 17 1 592 1 661 3.88e-57 213
MS.gene42548.t1 MTR_5g035280 25.410 366 208 12 482 789 735 1093 1.41e-14 78.6
MS.gene42548.t1 MTR_3g035960 28.940 698 385 21 1 615 6 675 1.25e-56 211
MS.gene42548.t1 MTR_5g037460 28.245 832 395 33 125 788 3 800 2.95e-56 207
MS.gene42548.t1 MTR_0144s0060 26.102 885 493 33 9 783 1 834 2.95e-56 210
MS.gene42548.t1 MTR_0230s0010 28.000 650 370 23 17 616 13 614 4.20e-56 209
MS.gene42548.t1 MTR_3g032340 27.097 775 434 25 1 690 6 734 5.83e-56 209
MS.gene42548.t1 MTR_3g032200 27.547 697 396 19 4 616 9 680 2.21e-55 207
MS.gene42548.t1 MTR_6g046130 26.735 879 495 28 9 783 1 834 2.40e-55 207
MS.gene42548.t1 MTR_6g046130 32.828 198 118 5 604 796 891 1078 5.36e-17 86.3
MS.gene42548.t1 MTR_5g072340 25.444 900 489 30 9 783 1 843 3.78e-55 206
MS.gene42548.t1 MTR_5g072340 31.496 254 147 9 553 790 749 991 4.75e-16 83.2
MS.gene42548.t1 MTR_5g071470 27.019 718 372 21 9 616 1 676 5.68e-55 205
MS.gene42548.t1 MTR_5g071470 29.756 205 115 6 611 786 781 985 2.33e-12 71.2
MS.gene42548.t1 MTR_0256s0050 25.964 882 466 31 9 780 1 805 6.81e-55 206
MS.gene42548.t1 MTR_0256s0050 31.343 201 120 5 604 792 878 1072 1.25e-14 79.0
MS.gene42548.t1 MTR_6g047450 29.123 673 354 23 9 599 1 632 7.27e-55 206
MS.gene42548.t1 MTR_0133s0030 26.872 681 370 21 9 593 1 649 8.85e-55 205
MS.gene42548.t1 MTR_3g033110 26.642 807 462 25 32 749 38 803 1.00e-54 205
MS.gene42548.t1 MTR_3g030980 26.895 673 390 17 1 594 6 655 1.46e-54 205
MS.gene42548.t1 MTR_3g030960 26.895 673 390 17 1 594 6 655 2.22e-54 204
MS.gene42548.t1 MTR_0133s0020 27.866 689 361 22 9 593 1 657 2.46e-54 204
MS.gene42548.t1 MTR_0133s0020 26.646 319 189 12 510 792 792 1101 9.47e-14 75.9
MS.gene42548.t1 MTR_8g038570 29.257 646 325 22 45 588 51 666 2.55e-54 204
MS.gene42548.t1 MTR_6g046570 27.047 684 368 21 9 593 5 656 3.29e-54 203
MS.gene42548.t1 MTR_6g046570 27.208 283 147 8 521 795 856 1087 8.36e-13 72.8
MS.gene42548.t1 MTR_3g033380 27.099 679 379 20 4 594 9 659 3.31e-54 204
MS.gene42548.t1 MTR_2g063777 27.457 692 401 17 1 615 6 673 3.79e-54 203
MS.gene42548.t1 MTR_3g032960 27.976 672 384 17 1 594 6 655 4.05e-54 203
MS.gene42548.t1 MTR_3g014390 26.820 824 456 26 35 749 40 825 7.83e-54 202
MS.gene42548.t1 MTR_3g023320 28.070 684 361 24 9 593 1 652 1.20e-53 202
MS.gene42548.t1 MTR_3g035940 29.096 653 351 20 47 615 53 677 1.22e-53 202
MS.gene42548.t1 MTR_6g052760 26.269 906 474 34 9 783 1 843 1.31e-53 202
MS.gene42548.t1 MTR_3g027420 28.614 678 361 16 1 593 5 644 1.37e-53 202
MS.gene42548.t1 MTR_8g011320 26.456 824 424 23 1 746 1 720 1.38e-53 200
MS.gene42548.t1 MTR_5g095910 28.833 711 370 22 1 615 6 676 1.74e-53 201
MS.gene42548.t1 MTR_2g062350 59.006 161 51 3 1 161 1 146 2.47e-53 182
MS.gene42548.t1 MTR_5g071823 24.972 897 463 30 9 741 1 851 3.77e-53 200
MS.gene42548.t1 MTR_5g071823 24.706 255 140 5 587 789 759 1013 4.08e-11 67.4
MS.gene42548.t1 MTR_5g071850 24.972 897 463 30 9 741 1 851 3.77e-53 200
MS.gene42548.t1 MTR_5g071850 24.706 255 140 5 587 789 759 1013 4.08e-11 67.4
MS.gene42548.t1 MTR_3g032500 27.541 679 376 19 4 594 9 659 3.86e-53 200
MS.gene42548.t1 MTR_0002s0110 28.429 700 388 21 1 615 6 677 4.83e-53 200
MS.gene42548.t1 MTR_5g072140 28.594 647 358 23 9 599 1 599 4.97e-53 199
MS.gene42548.t1 MTR_5g071780 26.695 708 354 20 9 598 1 661 5.52e-53 199
MS.gene42548.t1 MTR_5g072250 25.738 711 388 19 9 616 1 674 8.54e-53 198
MS.gene42548.t1 MTR_3g435720 27.650 698 397 19 1 616 6 677 1.12e-52 199
MS.gene42548.t1 MTR_5g035530 29.145 573 276 16 123 592 1 546 1.29e-52 198
MS.gene42548.t1 MTR_5g035530 29.412 221 144 4 576 788 759 975 2.42e-20 97.1
MS.gene42548.t1 MTR_3g014080 28.722 665 347 20 47 615 51 684 1.37e-52 199
MS.gene42548.t1 MTR_3g032370 27.179 677 383 18 1 594 4 653 1.44e-52 199
MS.gene42548.t1 MTR_3g033080 27.695 668 373 20 32 615 38 679 1.45e-52 198
MS.gene42548.t1 MTR_3g014080 28.614 664 349 19 47 615 51 684 1.72e-52 198
MS.gene42548.t1 MTR_1g037610 28.125 672 360 20 35 615 40 679 1.80e-52 199
MS.gene42548.t1 MTR_6g046930 29.013 679 348 25 9 601 1 631 2.07e-52 198
MS.gene42548.t1 MTR_2g014840 30.028 706 364 26 1 615 6 672 2.66e-52 198
MS.gene42548.t1 MTR_5g071670 24.605 886 505 26 9 783 1 834 3.97e-52 197
MS.gene42548.t1 MTR_5g071670 32.143 252 144 7 553 788 740 980 1.90e-17 88.2
MS.gene42548.t1 MTR_3g035480 28.063 702 388 20 1 615 6 677 4.42e-52 197
MS.gene42548.t1 MTR_7g021000 28.390 708 367 21 9 615 5 673 4.74e-52 195
MS.gene42548.t1 MTR_0002s0090 29.114 632 336 20 47 594 53 656 4.81e-52 197
MS.gene42548.t1 MTR_3g035500 29.114 632 336 20 47 594 53 656 4.81e-52 197
MS.gene42548.t1 MTR_3g032800 27.556 675 383 18 1 594 6 655 6.04e-52 197
MS.gene42548.t1 MTR_3g027250 28.507 663 346 19 41 615 41 663 6.58e-52 196
MS.gene42548.t1 MTR_3g032150 27.031 677 384 18 1 594 4 653 6.88e-52 197
MS.gene42548.t1 MTR_7g021000 28.390 708 367 21 9 615 5 673 8.36e-52 196
MS.gene42548.t1 MTR_3g014360 28.006 682 357 22 1 593 5 641 1.81e-51 195
MS.gene42548.t1 MTR_8g011850 26.334 881 458 25 1 789 1102 1883 2.37e-51 195
MS.gene42548.t1 MTR_3g031940 27.111 675 383 19 4 594 9 658 2.88e-51 195
MS.gene42548.t1 MTR_5g071220 27.850 693 358 25 9 606 1 646 6.70e-51 193
MS.gene42548.t1 MTR_5g071220 27.850 693 358 25 9 606 1 646 7.92e-51 193
MS.gene42548.t1 MTR_8g036195 28.399 662 369 23 9 593 1 634 1.08e-50 192
MS.gene42548.t1 MTR_8g036195 28.315 279 129 11 521 789 863 1080 1.53e-12 72.0
MS.gene42548.t1 MTR_7g071940 25.476 840 462 26 9 733 1 791 1.47e-50 192
MS.gene42548.t1 MTR_7g071940 29.316 307 159 9 529 788 711 1006 8.28e-17 85.9
MS.gene42548.t1 MTR_8g011600 28.738 602 295 17 159 666 6 567 2.24e-50 190
MS.gene42548.t1 MTR_5g070470 26.890 688 358 21 9 599 1 640 2.42e-50 192
MS.gene42548.t1 MTR_5g070470 29.493 217 124 7 599 786 774 990 1.36e-11 68.9
MS.gene42548.t1 MTR_0267s0070 28.899 654 359 18 47 615 52 684 3.36e-50 192
MS.gene42548.t1 MTR_5g070960 26.141 723 374 22 9 616 1 678 6.31e-50 190
MS.gene42548.t1 MTR_5g070960 27.863 262 137 7 577 786 753 1014 2.24e-14 77.8
MS.gene42548.t1 MTR_3g032110 26.003 773 442 22 1 690 6 731 6.59e-50 191
MS.gene42548.t1 MTR_5g035300 28.927 522 267 17 1 444 1 496 6.61e-50 183
MS.gene42548.t1 MTR_5g071800 25.806 713 387 19 9 616 1 676 8.09e-50 190
MS.gene42548.t1 MTR_5g071800 28.521 284 167 6 539 790 734 1013 5.80e-17 86.3
MS.gene42548.t1 MTR_0005s0200 27.821 647 368 16 45 615 69 692 8.48e-50 190
MS.gene42548.t1 MTR_0005s0200 27.509 269 179 7 528 783 883 1148 4.70e-17 86.7
MS.gene42548.t1 MTR_3g018930 28.073 659 363 18 41 615 48 679 1.39e-49 187
MS.gene42548.t1 MTR_3g014320 28.462 650 337 20 35 591 40 654 1.61e-49 189
MS.gene42548.t1 MTR_3g018930 27.769 659 365 17 41 615 48 679 1.95e-49 189
MS.gene42548.t1 MTR_3g022400 28.594 633 336 18 41 593 41 637 2.50e-49 188
MS.gene42548.t1 MTR_3g022400 28.594 633 336 18 41 593 41 637 4.48e-49 188
MS.gene42548.t1 MTR_5g071310 24.656 872 496 28 9 783 1 808 6.58e-49 187
MS.gene42548.t1 MTR_5g071310 29.482 251 150 7 553 787 714 953 1.15e-11 69.3
MS.gene42548.t1 MTR_6g046620 24.710 862 496 29 9 786 1 793 7.80e-49 187
MS.gene42548.t1 MTR_6g046620 30.645 186 114 4 604 783 845 1021 1.55e-15 81.6
MS.gene42548.t1 MTR_3g022600 27.193 684 385 18 1 593 5 666 1.10e-48 187
MS.gene42548.t1 MTR_3g033860 27.315 648 374 16 44 615 50 676 1.12e-48 187
MS.gene42548.t1 MTR_3g033240 26.657 679 381 17 4 594 9 658 1.39e-48 186
MS.gene42548.t1 MTR_3g014510 27.484 644 356 15 35 593 40 657 1.66e-48 186
MS.gene42548.t1 MTR_3g019040 28.700 669 362 18 33 615 38 677 2.08e-48 186
MS.gene42548.t1 MTR_3g020890 28.899 654 327 23 33 594 39 646 2.09e-48 186
MS.gene42548.t1 MTR_3g014040 27.538 650 357 13 47 615 53 669 8.91e-48 184
MS.gene42548.t1 MTR_6g084550 27.769 641 341 19 35 594 41 640 2.97e-47 181
MS.gene42548.t1 MTR_4g050410 26.923 676 384 21 1 594 6 653 4.52e-47 182
MS.gene42548.t1 MTR_3g032760 26.966 623 352 15 51 594 57 655 4.94e-47 182
MS.gene42548.t1 MTR_5g070490 23.874 888 513 24 9 783 1 838 6.84e-47 181
MS.gene42548.t1 MTR_5g070490 29.482 251 148 8 553 786 744 982 2.57e-11 68.2
MS.gene42548.t1 MTR_0511s0020 25.346 868 490 35 17 782 13 824 7.08e-47 181
MS.gene42548.t1 MTR_0511s0020 26.797 306 179 13 517 788 777 1071 6.57e-11 66.6
MS.gene42548.t1 MTR_3g015260 28.852 662 353 21 41 615 48 678 8.04e-47 181
MS.gene42548.t1 MTR_8g030860 27.313 681 385 22 1 595 6 662 8.56e-47 181
MS.gene42548.t1 MTR_3g022790 28.571 665 352 20 41 615 41 672 1.71e-46 180
MS.gene42548.t1 MTR_3g015260 28.852 662 353 21 41 615 48 678 1.93e-46 179
MS.gene42548.t1 MTR_4g055630 26.667 675 366 21 9 593 1 636 2.53e-46 179
MS.gene42548.t1 MTR_4g055630 27.217 327 169 9 529 790 722 1044 1.43e-13 75.5
MS.gene42548.t1 MTR_0425s0020 26.951 679 383 18 1 588 5 661 4.01e-46 179
MS.gene42548.t1 MTR_2g014720 34.107 431 215 15 244 616 160 579 5.57e-46 178
MS.gene42548.t1 MTR_6g052455 28.777 556 275 21 123 593 1 520 6.88e-46 177
MS.gene42548.t1 MTR_6g052455 28.729 181 109 7 628 788 800 980 1.12e-11 69.3
MS.gene42548.t1 MTR_6g046440 30.843 522 248 19 9 449 1 490 1.78e-45 176
MS.gene42548.t1 MTR_6g046440 27.619 210 103 6 604 789 852 1036 9.54e-12 69.3
MS.gene42548.t1 MTR_3g028040 26.941 657 383 16 35 615 41 676 2.59e-45 176
MS.gene42548.t1 MTR_3g034380 26.275 647 381 15 44 615 50 675 3.20e-45 176
MS.gene42548.t1 MTR_3g021400 26.346 687 366 17 17 615 20 654 3.94e-45 176
MS.gene42548.t1 MTR_6g016420 28.397 574 289 16 100 593 92 623 4.31e-45 175
MS.gene42548.t1 MTR_1g022380 24.559 680 364 20 41 616 37 671 4.77e-45 175
MS.gene42548.t1 MTR_6g016420 28.397 574 289 16 100 593 92 623 5.03e-45 175
MS.gene42548.t1 MTR_3g027200 25.782 671 404 12 1 595 5 657 7.08e-45 175
MS.gene42548.t1 MTR_3g034460 26.424 632 368 15 60 615 50 660 1.02e-44 174
MS.gene42548.t1 MTR_3g021100 27.864 646 334 21 41 593 42 648 2.29e-44 173
MS.gene42548.t1 MTR_3g014470 26.049 810 403 27 35 735 40 762 2.46e-44 172
MS.gene42548.t1 MTR_3g022300 24.339 945 511 28 1 767 5 923 1.21e-43 171
MS.gene42548.t1 MTR_3g018980 28.528 659 360 20 41 615 46 677 1.77e-43 170
MS.gene42548.t1 MTR_3g018980 28.528 659 360 20 41 615 46 677 2.27e-43 170
MS.gene42548.t1 MTR_7g078790 26.984 630 340 20 47 594 51 642 2.34e-43 169
MS.gene42548.t1 MTR_5g071570 24.339 719 399 22 1 616 1 677 3.37e-43 169
MS.gene42548.t1 MTR_3g035810 27.220 687 387 24 1 615 1 646 3.43e-43 169
MS.gene42548.t1 MTR_5g040770 29.836 610 334 18 244 775 15 608 4.70e-43 168
MS.gene42548.t1 MTR_5g040770 25.161 310 211 9 496 789 511 815 6.73e-14 76.3
MS.gene42548.t1 MTR_1g008240 27.039 699 381 21 4 615 5 661 6.32e-43 169
MS.gene42548.t1 MTR_3g034430 26.810 649 376 17 44 615 50 676 8.22e-43 169
MS.gene42548.t1 MTR_8g106550 27.348 607 340 18 48 593 24 590 9.12e-43 168
MS.gene42548.t1 MTR_3g022870 27.245 646 352 19 33 594 30 641 3.11e-42 167
MS.gene42548.t1 MTR_3g023030 26.354 683 386 18 1 595 5 658 8.62e-42 165
MS.gene42548.t1 MTR_3g022920 27.035 651 338 20 30 593 33 633 9.44e-42 165
MS.gene42548.t1 MTR_8g446950 28.544 522 272 16 161 594 171 679 1.21e-41 165
MS.gene42548.t1 MTR_1g023600 25.291 688 377 18 9 593 1 654 1.80e-41 164
MS.gene42548.t1 MTR_1g023600 26.786 280 142 7 554 788 749 1010 9.72e-12 69.3
MS.gene42548.t1 MTR_3g025360 26.025 707 354 21 41 612 41 713 1.91e-41 164
MS.gene42548.t1 MTR_3g021170 26.746 673 362 21 33 615 34 665 2.02e-41 164
MS.gene42548.t1 MTR_3g021340 27.769 659 356 20 41 615 42 664 4.91e-41 163
MS.gene42548.t1 MTR_2g038760 25.983 712 392 21 12 618 16 697 1.59e-40 161
MS.gene42548.t1 MTR_2g014730 27.247 712 346 24 1 612 6 645 2.18e-40 161
MS.gene42548.t1 MTR_6g037690 46.597 191 89 4 1 183 1 186 7.60e-40 150
MS.gene42548.t1 MTR_3g035840 28.543 501 253 14 48 471 54 526 8.69e-40 155
MS.gene42548.t1 MTR_3g027470 28.191 564 308 15 106 593 19 561 1.97e-39 157
MS.gene42548.t1 MTR_3g022940 26.627 676 366 21 10 593 3 640 2.42e-39 157
MS.gene42548.t1 MTR_3g033130 25.903 637 360 18 32 597 38 633 2.50e-39 157
MS.gene42548.t1 MTR_2g038900 26.457 669 360 20 51 618 49 686 2.55e-39 157
MS.gene42548.t1 MTR_3g022230 25.329 837 476 28 1 723 5 806 4.79e-38 154
MS.gene42548.t1 MTR_3g022870 25.113 888 476 31 33 771 30 877 5.06e-38 153
MS.gene42548.t1 MTR_3g022130 25.224 670 370 15 1 588 5 625 7.08e-38 153
MS.gene42548.t1 MTR_2g039090 26.026 853 489 31 1 750 1 814 5.36e-37 150
MS.gene42548.t1 MTR_3g021380 25.773 679 383 20 25 612 26 674 1.48e-36 149
MS.gene42548.t1 MTR_3g011620 31.144 411 214 9 266 610 281 688 5.35e-36 147
MS.gene42548.t1 MTR_3g071130 26.847 812 446 34 45 767 49 801 1.51e-35 145
MS.gene42548.t1 MTR_3g071130 28.731 268 176 6 528 789 851 1109 2.01e-16 84.7
MS.gene42548.t1 MTR_7g091660 33.898 295 147 9 9 281 1 269 1.97e-35 140
MS.gene42548.t1 MTR_7g091660 44.505 182 100 1 371 551 275 456 3.06e-33 134
MS.gene42548.t1 MTR_5g035230 27.071 495 223 17 33 441 29 471 2.00e-35 141
MS.gene42548.t1 MTR_7g089080 31.892 370 196 13 259 590 623 974 2.05e-35 145
MS.gene42548.t1 MTR_3g023030 25.920 652 394 18 1 595 5 624 2.80e-35 145
MS.gene42548.t1 MTR_3g056585 24.112 788 464 28 23 707 19 775 3.25e-35 144
MS.gene42548.t1 MTR_1g045960 26.202 603 346 19 57 594 56 624 1.64e-34 142
MS.gene42548.t1 MTR_3g022570 26.923 546 284 15 133 588 153 673 2.48e-34 142
MS.gene42548.t1 MTR_2g038930 28.074 488 259 14 201 618 58 523 7.07e-34 140
MS.gene42548.t1 MTR_4g019360 29.167 480 263 12 162 593 127 577 1.80e-33 139
MS.gene42548.t1 MTR_4g126000 24.693 814 457 26 9 765 1 715 2.23e-33 138
MS.gene42548.t1 MTR_5g037590 30.370 405 218 7 265 615 243 637 3.67e-33 138
MS.gene42548.t1 MTR_3g070590 26.635 627 347 23 45 594 49 639 6.77e-33 137
MS.gene42548.t1 MTR_3g070590 28.889 270 176 7 528 791 809 1068 4.72e-16 83.2
MS.gene42548.t1 MTR_3g007190 29.858 422 225 10 201 570 128 530 1.19e-32 136
MS.gene42548.t1 MTR_0603s0010 31.458 391 200 13 265 594 333 716 7.81e-32 134
MS.gene42548.t1 MTR_3g019000 25.070 710 398 20 1 615 5 675 1.63e-31 133
MS.gene42548.t1 MTR_3g071070 30.653 398 209 13 256 594 45 434 8.11e-31 130
MS.gene42548.t1 MTR_3g071070 29.104 268 175 6 528 789 646 904 6.66e-17 85.9
MS.gene42548.t1 MTR_3g435210 26.324 623 317 21 262 759 81 686 1.13e-30 130
MS.gene42548.t1 MTR_2g038510 22.388 938 547 29 9 786 5 921 1.63e-30 129
MS.gene42548.t1 MTR_3g012090 22.752 734 421 25 1 621 1 701 1.69e-30 129
MS.gene42548.t1 MTR_3g012310 22.061 825 491 31 9 720 5 790 8.13e-30 127
MS.gene42548.t1 MTR_3g435220 27.036 614 342 24 45 594 43 614 8.83e-30 127
MS.gene42548.t1 MTR_6g046450 29.787 376 197 12 277 588 322 694 2.41e-29 126
MS.gene42548.t1 MTR_6g046550 24.960 625 385 19 41 619 43 629 2.83e-29 124
MS.gene42548.t1 MTR_6g046550 27.037 270 147 7 521 788 434 655 1.71e-13 74.7
MS.gene42548.t1 MTR_3g456030 23.304 678 399 23 9 591 5 656 1.61e-28 123
MS.gene42548.t1 MTR_2g014820 30.244 410 225 13 1 378 6 386 2.07e-28 122
MS.gene42548.t1 MTR_3g020620 31.378 392 200 14 265 594 420 804 3.61e-28 122
MS.gene42548.t1 MTR_4g073840 24.422 692 390 22 1 585 1 666 5.10e-28 121
MS.gene42548.t1 MTR_2g060700 30.900 411 245 13 201 592 47 437 7.11e-28 120
MS.gene42548.t1 MTR_0002s0120 31.624 351 179 10 322 615 114 460 7.60e-28 120
MS.gene42548.t1 MTR_5g027860 24.526 685 385 27 1 593 1 645 3.38e-26 115
MS.gene42548.t1 MTR_3g056200 23.703 848 475 37 31 747 37 843 5.88e-26 115
MS.gene42548.t1 MTR_7g015770 23.172 971 518 38 5 786 3 934 8.25e-26 114
MS.gene42548.t1 MTR_5g027810 24.077 677 403 24 1 593 1 650 1.40e-25 114
MS.gene42548.t1 MTR_5g039570 25.197 381 201 10 9 356 1 330 3.14e-25 111
MS.gene42548.t1 MTR_3g022060 23.494 830 404 29 83 741 14 783 8.01e-25 111
MS.gene42548.t1 MTR_3g011480 23.352 698 390 24 1 591 1 660 1.07e-24 111
MS.gene42548.t1 MTR_5g021080 26.613 496 264 17 201 621 221 691 1.08e-24 110
MS.gene42548.t1 MTR_1g016210 21.360 941 529 35 31 796 27 931 3.08e-24 109
MS.gene42548.t1 MTR_3g056590 22.072 666 388 23 23 580 19 661 3.52e-24 109
MS.gene42548.t1 MTR_3g056620 22.373 809 444 30 31 699 37 801 3.63e-24 109
MS.gene42548.t1 MTR_7g022290 25.156 481 261 16 382 786 58 515 3.88e-24 107
MS.gene42548.t1 MTR_3g055870 22.977 692 392 26 23 613 16 667 1.25e-23 107
MS.gene42548.t1 MTR_5g027910 21.997 691 400 27 1 593 1 650 2.14e-23 107
MS.gene42548.t1 MTR_3g056635 22.524 626 351 22 31 550 27 624 2.72e-23 105
MS.gene42548.t1 MTR_5g028070 27.111 450 232 17 263 624 387 828 3.18e-23 106
MS.gene42548.t1 MTR_5g028070 33.735 166 98 4 632 790 1077 1237 4.32e-16 83.6
MS.gene42548.t1 MTR_2g039040 27.295 403 216 12 285 618 164 558 6.38e-23 104
MS.gene42548.t1 MTR_3g055720 22.689 952 536 38 1 795 4 912 2.86e-22 103
MS.gene42548.t1 MTR_3g455900 24.595 679 369 24 202 789 107 733 3.71e-22 102
MS.gene42548.t1 MTR_3g069210 23.827 831 482 34 8 724 3 796 5.63e-22 102
MS.gene42548.t1 MTR_3g056410 22.997 861 467 30 62 755 12 843 6.43e-22 102
MS.gene42548.t1 MTR_3g056360 22.907 860 467 30 62 754 21 851 2.54e-21 100
MS.gene42548.t1 MTR_3g056320 22.857 770 433 30 49 699 59 786 2.76e-21 100
MS.gene42548.t1 MTR_1g037730 27.515 338 199 6 47 357 53 371 4.77e-21 96.3
MS.gene42548.t1 MTR_3g012060 21.238 824 476 34 9 720 5 767 5.32e-21 99.4
MS.gene42548.t1 MTR_3g011420 21.658 808 454 30 1 661 1 776 6.42e-21 99.0
MS.gene42548.t1 MTR_3g055740 22.391 920 507 32 1 788 4 848 1.34e-20 97.8
MS.gene42548.t1 MTR_3g055930 20.953 902 520 34 52 788 60 933 1.91e-20 97.4
MS.gene42548.t1 MTR_3g011280 20.296 946 551 34 1 793 1 896 6.05e-20 95.9
MS.gene42548.t1 MTR_8g445160 31.783 258 147 6 533 789 450 679 1.16e-19 94.4
MS.gene42548.t1 MTR_8g445160 28.775 351 204 16 250 572 320 652 1.35e-18 90.9
MS.gene42548.t1 MTR_3g011280 20.207 965 561 35 1 793 1 928 1.43e-19 94.7
MS.gene42548.t1 MTR_2g039010 25.753 365 205 9 51 375 27 365 3.26e-19 90.9
MS.gene42548.t1 MTR_3g017620 29.054 296 147 6 201 450 191 469 3.78e-19 92.0
MS.gene42548.t1 MTR_3g055710 26.124 467 256 18 201 602 65 507 5.94e-19 92.4
MS.gene42548.t1 MTR_8g085460 58.462 65 27 0 444 508 26 90 1.55e-18 81.6
MS.gene42548.t1 MTR_5g028340 35.152 165 104 2 632 794 922 1085 1.83e-18 91.3
MS.gene42548.t1 MTR_5g028340 28.676 272 160 11 511 765 569 823 5.32e-12 70.1
MS.gene42548.t1 MTR_3g056300 22.705 599 337 24 49 561 1 559 5.04e-18 89.4
MS.gene42548.t1 MTR_5g035450 28.763 372 153 14 437 787 1 281 6.56e-18 87.4
MS.gene42548.t1 MTR_3g036050 33.047 233 145 6 390 615 59 287 6.69e-18 89.4
MS.gene42548.t1 MTR_5g028420 25.168 596 329 24 242 744 225 796 8.00e-18 89.0
MS.gene42548.t1 MTR_5g028420 33.974 156 100 2 632 785 929 1083 4.21e-14 77.0
MS.gene42548.t1 MTR_0005s0230 28.042 378 187 14 252 588 117 450 4.40e-17 85.5
MS.gene42548.t1 MTR_5g028290 34.706 170 99 3 632 790 952 1120 9.79e-17 85.5
MS.gene42548.t1 MTR_5g028290 28.571 238 155 7 511 744 596 822 1.56e-11 68.6
MS.gene42548.t1 MTR_0534s0010 33.951 162 97 3 633 789 11 167 2.52e-16 77.8
MS.gene42548.t1 MTR_0083s0120 31.878 229 146 5 395 616 1 226 3.40e-16 83.6
MS.gene42548.t1 MTR_3g024460 29.670 273 156 7 374 612 34 304 4.01e-16 83.2
MS.gene42548.t1 MTR_0137s0010 33.478 230 126 8 406 615 1 223 7.55e-16 82.4
MS.gene42548.t1 MTR_5g028610 27.578 417 198 19 263 593 226 624 1.42e-15 81.6
MS.gene42548.t1 MTR_5g028610 31.056 161 106 3 632 790 920 1077 2.75e-12 71.2
MS.gene42548.t1 MTR_5g028750 32.484 157 103 2 632 786 916 1071 3.89e-15 80.5
MS.gene42548.t1 MTR_5g028750 22.772 606 333 26 245 744 203 779 3.21e-14 77.4
MS.gene42548.t1 MTR_5g035200 39.535 86 52 0 703 788 274 359 6.22e-15 77.8
MS.gene42548.t1 MTR_8g039260 31.466 232 141 9 406 624 3 229 9.91e-15 78.6
MS.gene42548.t1 MTR_3g058790 25.087 578 336 23 259 754 292 854 3.46e-14 77.0
MS.gene42548.t1 MTR_0144s0010 24.176 273 155 6 518 790 186 406 1.56e-13 73.9
MS.gene42548.t1 MTR_3g022740 33.333 189 115 6 437 615 211 398 2.51e-13 74.3
MS.gene42548.t1 MTR_3g012250 21.667 420 257 12 1 372 1 396 5.26e-13 73.6
MS.gene42548.t1 MTR_3g033390 33.858 127 77 3 350 475 75 195 1.16e-12 68.2
MS.gene42548.t1 MTR_3g020470 24.432 528 310 23 254 746 290 763 1.44e-12 72.0
MS.gene42548.t1 MTR_3g034650 29.902 204 107 5 390 593 34 201 1.51e-12 71.6
MS.gene42548.t1 MTR_3g058740 22.833 600 362 22 259 773 85 668 1.66e-12 71.6
MS.gene42548.t1 MTR_4g052500 38.835 103 47 1 687 789 443 529 2.11e-12 70.9
MS.gene42548.t1 MTR_3g058740 22.833 600 362 22 259 773 292 875 2.31e-12 71.2
MS.gene42548.t1 MTR_5g018120 23.195 651 383 25 203 794 202 794 5.52e-12 70.1
MS.gene42548.t1 MTR_6g078930 30.252 238 143 8 536 765 845 1067 9.98e-12 69.3
MS.gene42548.t1 MTR_6g046760 26.502 283 192 8 519 789 155 433 1.13e-11 68.2
MS.gene42548.t1 MTR_7g109070 56.604 53 23 0 529 581 2 54 1.41e-11 60.8
MS.gene42548.t1 MTR_8g090305 27.465 284 171 9 511 765 233 510 1.77e-11 67.8
MS.gene42548.t1 MTR_3g058740 23.368 582 354 26 258 773 84 639 2.99e-11 67.8
MS.gene42548.t1 MTR_3g058740 23.408 581 353 25 259 773 281 835 3.14e-11 67.8
MS.gene42548.t1 MTR_6g046900 25.993 277 178 7 516 789 124 376 3.62e-11 66.2
MS.gene42548.t1 MTR_0511s0010 29.787 188 98 6 628 788 53 233 4.12e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42548.t1 AT3G14470 25.744 672 391 20 1 588 4 651 5.88e-48 184
MS.gene42548.t1 AT3G14470 25.744 672 391 20 1 588 4 651 5.88e-48 184
MS.gene42548.t1 AT3G14460 25.710 669 392 18 1 588 1 645 9.39e-44 172
MS.gene42548.t1 AT1G58410 24.921 630 366 23 22 578 12 607 5.71e-31 130
MS.gene42548.t1 AT1G58390 25.375 666 367 25 16 579 12 649 5.60e-30 127
MS.gene42548.t1 AT1G58390 25.375 666 367 25 16 579 12 649 5.60e-30 127
MS.gene42548.t1 AT3G07040 23.979 759 369 30 164 760 170 882 2.42e-27 119
MS.gene42548.t1 AT3G50950 23.761 686 387 25 9 588 5 660 4.98e-27 118
MS.gene42548.t1 AT3G50950 23.761 686 387 25 9 588 5 660 4.98e-27 118
MS.gene42548.t1 AT5G43470 23.846 780 441 26 1 674 1 733 1.23e-26 117
MS.gene42548.t1 AT5G43470 23.846 780 441 26 1 674 1 733 1.23e-26 117
MS.gene42548.t1 AT5G43470 23.846 780 441 26 1 674 1 733 1.23e-26 117
MS.gene42548.t1 AT5G43470 23.846 780 441 26 1 674 1 733 1.23e-26 117
MS.gene42548.t1 AT1G58410 24.018 662 364 24 22 578 12 639 1.26e-26 117
MS.gene42548.t1 AT1G58410 24.018 662 364 24 22 578 12 639 1.26e-26 117
MS.gene42548.t1 AT1G58410 24.018 662 364 24 22 578 12 639 1.26e-26 117
MS.gene42548.t1 AT3G46530 24.432 528 295 17 9 456 5 508 2.00e-25 113
MS.gene42548.t1 AT3G46730 25.123 816 453 31 9 721 5 765 8.28e-25 111
MS.gene42548.t1 AT3G46710 24.849 829 474 32 9 738 5 783 3.93e-23 105
MS.gene42548.t1 AT1G69550 32.941 255 161 6 517 765 934 1184 6.65e-21 99.4
MS.gene42548.t1 AT1G69550 30.682 264 154 9 517 762 982 1234 1.76e-15 81.6
MS.gene42548.t1 AT1G69550 27.839 273 159 7 525 765 727 993 2.83e-15 80.9
MS.gene42548.t1 AT1G69550 32.794 247 156 6 525 765 823 1065 7.81e-15 79.7
MS.gene42548.t1 AT1G69550 28.058 278 171 6 515 765 670 945 2.07e-12 71.6
MS.gene42548.t1 AT1G58602 22.254 710 423 25 13 615 1 688 1.25e-18 91.7
MS.gene42548.t1 AT1G58602 22.254 710 423 25 13 615 1 688 1.25e-18 91.7
MS.gene42548.t1 AT2G14080 29.502 261 165 7 515 765 518 769 3.96e-17 87.0
MS.gene42548.t1 AT2G14080 28.102 274 175 10 500 762 527 789 3.91e-13 73.9
MS.gene42548.t1 AT2G14080 26.744 258 161 7 511 745 632 884 4.81e-11 67.0
MS.gene42548.t1 AT2G14080 29.502 261 165 7 515 765 651 902 4.24e-17 87.0
MS.gene42548.t1 AT2G14080 28.102 274 175 10 500 762 660 922 4.32e-13 73.9
MS.gene42548.t1 AT2G14080 26.984 252 156 7 517 745 771 1017 5.38e-11 67.0
MS.gene42548.t1 AT4G27220 23.186 703 366 28 201 765 177 843 7.14e-17 85.9
MS.gene42548.t1 AT4G27220 23.186 703 366 28 201 765 169 835 8.80e-17 85.5
MS.gene42548.t1 AT5G44510 28.740 254 167 7 520 765 709 956 3.24e-16 84.0
MS.gene42548.t1 AT5G44510 26.894 264 168 9 515 765 657 908 1.30e-13 75.5
MS.gene42548.t1 AT5G44510 28.740 254 167 7 520 765 709 956 3.62e-16 84.0
MS.gene42548.t1 AT5G44510 26.894 264 168 9 515 765 657 908 1.33e-13 75.5
MS.gene42548.t1 AT5G44510 28.740 254 167 7 520 765 709 956 3.91e-16 83.6
MS.gene42548.t1 AT5G44510 26.894 264 168 9 515 765 657 908 1.47e-13 75.5
MS.gene42548.t1 AT5G44510 28.740 254 167 7 520 765 709 956 3.95e-16 83.6
MS.gene42548.t1 AT5G44510 26.894 264 168 9 515 765 657 908 1.46e-13 75.5
MS.gene42548.t1 AT1G12280 26.374 364 193 15 261 588 217 541 4.67e-16 83.2
MS.gene42548.t1 AT1G59780 24.444 405 234 16 14 389 13 374 3.14e-15 80.5
MS.gene42548.t1 AT1G59780 24.198 405 235 16 14 389 18 379 3.28e-15 80.5
MS.gene42548.t1 AT3G44670 28.175 252 129 6 515 765 693 893 1.21e-13 75.9
MS.gene42548.t1 AT3G44670 28.175 252 129 6 515 765 693 893 1.21e-13 75.9
MS.gene42548.t1 AT3G25510 27.451 255 161 7 525 767 518 760 2.90e-12 71.2
MS.gene42548.t1 AT3G25510 27.451 255 161 7 525 767 518 760 2.90e-12 71.2
MS.gene42548.t1 AT5G17680 24.675 308 154 7 518 750 720 1024 4.87e-12 70.5
MS.gene42548.t1 AT5G17680 27.273 253 146 5 507 750 800 1023 5.00e-12 70.5
MS.gene42548.t1 AT5G11250 28.462 260 168 6 515 765 571 821 8.15e-12 69.7
MS.gene42548.t1 AT5G11250 28.462 260 168 6 515 765 571 821 8.15e-12 69.7
MS.gene42548.t1 AT1G17600 22.345 631 332 26 257 765 281 875 9.40e-12 69.3
MS.gene42548.t1 AT5G11250 28.462 260 168 6 515 765 653 903 9.48e-12 69.7
MS.gene42548.t1 AT1G59620 27.027 185 114 7 204 385 83 249 3.48e-11 67.4

Find 147 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACAAATATTTGCGTTATT+TGG 0.118348 7.1:+16296003 MS.gene42548:CDS
CCAGCATTTCACCTCCATTT+AGG 0.134513 7.1:-16295661 None:intergenic
ATGTGCAAAGTCTGTAATTT+AGG 0.171666 7.1:-16296421 None:intergenic
GAAAATTTGCCAAAAGGATT+AGG 0.228170 7.1:+16296190 MS.gene42548:CDS
GTTATGAAATTTGTAGTCTT+TGG 0.232588 7.1:+16295615 MS.gene42548:CDS
CAGCATTTCACCTCCATTTA+GGG 0.250995 7.1:-16295660 None:intergenic
CAAATCTTGAAGATGGATTA+AGG 0.264105 7.1:-16296284 None:intergenic
GATGAAACATTTGTATCTTC+TGG 0.276428 7.1:+16296504 MS.gene42548:CDS
GACTTTCATTGTTCAATAAC+AGG 0.290164 7.1:-16296465 None:intergenic
CTTTCTGATGTTGAAATAAT+CGG 0.291880 7.1:-16294943 None:intergenic
TTTCCGATCTCTACTAGATT+TGG 0.296779 7.1:-16295353 None:intergenic
TTCTCACACTTCTAGACTTT+GGG 0.300025 7.1:-16295913 None:intergenic
AGGAGTTTGCAAATGGAATT+TGG 0.302848 7.1:-16296127 None:intergenic
ATTGATGCTTCAAGTGTAAT+AGG 0.307828 7.1:+16294723 MS.gene42548:CDS
TTATTTCCCATCTCAGGATT+AGG 0.312807 7.1:+16295941 MS.gene42548:CDS
AAGCAAGTCGTGGAAGCTTC+TGG 0.313832 7.1:+16294510 MS.gene42548:CDS
GCATTCAAGATCATTTATTC+AGG 0.318513 7.1:+16295715 MS.gene42548:CDS
GATTCAAATCTTGTAATTGT+AGG 0.320621 7.1:-16296147 None:intergenic
AATGTTTCATCCTCAATGTT+TGG 0.326367 7.1:-16296492 None:intergenic
ATTAGCTTCCCTAATCCTTT+TGG 0.327021 7.1:-16296199 None:intergenic
GGATTAGTTCAATCCCTAAA+TGG 0.333690 7.1:+16295647 MS.gene42548:CDS
AAAATTTGCCAAAAGGATTA+GGG 0.340785 7.1:+16296191 MS.gene42548:CDS
GTTTATCTCTGTTTGTCAAA+TGG 0.345661 7.1:+16295300 MS.gene42548:CDS
GATATTGCTAATTCACTGTT+AGG 0.354354 7.1:+16294264 MS.gene42548:CDS
CTTCTCACACTTCTAGACTT+TGG 0.358115 7.1:-16295914 None:intergenic
CCGCTAGCCGTGAGAACATT+AGG 0.366354 7.1:+16295404 MS.gene42548:CDS
TTTATCTCTGTTTGTCAAAT+GGG 0.368576 7.1:+16295301 MS.gene42548:CDS
ATGAAACATTTGTATCTTCT+GGG 0.372705 7.1:+16296505 MS.gene42548:CDS
AGTATATTATTTCCCATCTC+AGG 0.380647 7.1:+16295935 MS.gene42548:CDS
GATGCTGAAGATGTATTTGA+TGG 0.381970 7.1:+16294465 MS.gene42548:CDS
AATTGAGCAAAACCACTTGA+TGG 0.384813 7.1:-16295023 None:intergenic
ACTGGAAGCATCTTTAGATT+AGG 0.393641 7.1:-16296607 None:intergenic
TGCACCGGGAAGCAAAATTA+TGG 0.397029 7.1:+16295193 MS.gene42548:CDS
GTTTGTCAAATGGGCATTCA+AGG 0.400972 7.1:+16295310 MS.gene42548:CDS
TTATGAAATTTGTAGTCTTT+GGG 0.403016 7.1:+16295616 MS.gene42548:CDS
TTCAAAATACATTTCTTCAA+TGG 0.403966 7.1:-16296359 None:intergenic
CAAGGTCTCTAAAGTGTTCA+TGG 0.411760 7.1:-16296569 None:intergenic
TAGATCTTTATACACATCAT+AGG 0.411898 7.1:-16294325 None:intergenic
ACGGAAAGCAAGTGAATTAG+AGG 0.412932 7.1:-16294568 None:intergenic
ATGGGCTGCGCGAATGGCTG+AGG 0.416679 7.1:+16294421 MS.gene42548:CDS
TGATTTGATGTGAGCAATCA+TGG 0.420332 7.1:-16296797 None:intergenic
AACAGAGATAAACAATCCTT+TGG 0.421808 7.1:-16295290 None:intergenic
TTCATCCTCAATGTTTGGAT+TGG 0.424021 7.1:-16296487 None:intergenic
GTGAAAGTCTTCTGAATGAA+TGG 0.425181 7.1:+16295972 MS.gene42548:CDS
TGTGCAAAGTCTGTAATTTA+GGG 0.432345 7.1:-16296420 None:intergenic
CTCTCCTGTTGGTTCATCAA+TGG 0.433051 7.1:-16296824 None:intergenic
TTTAATTTAGCAATTGAATT+GGG 0.435156 7.1:-16296055 None:intergenic
CTACAATGACTCGTCTTAAG+AGG 0.438496 7.1:+16296638 MS.gene42548:CDS
GGAATATACCTCAGCAAGTA+AGG 0.445041 7.1:+16295846 MS.gene42548:CDS
GCAGCTGATGGAGTCAGGTT+TGG 0.446331 7.1:+16294642 MS.gene42548:CDS
AATTGTCAGTGGTGTATTGT+TGG 0.447608 7.1:+16294371 MS.gene42548:CDS
TTCTGAATGAATGGATTTCA+AGG 0.452972 7.1:+16295981 MS.gene42548:CDS
TTGAAAGATTTGATAAAAGT+TGG 0.454708 7.1:+16295170 MS.gene42548:CDS
CGCTTGTGACCTTACCAGAA+TGG 0.455472 7.1:+16296536 MS.gene42548:CDS
GGTCTTACAAATGTTGATCC+TGG 0.460629 7.1:+16294663 MS.gene42548:CDS
GAAAACTCAAATCTTGAAGA+TGG 0.462520 7.1:-16296291 None:intergenic
TAACTCAATTGCTTTGATGA+TGG 0.471279 7.1:+16295229 MS.gene42548:CDS
AGGTGGCAGCTGATGGAGTC+AGG 0.471621 7.1:+16294637 MS.gene42548:CDS
TCACCATCGCCGTGAGGATG+TGG 0.471867 7.1:-16294789 None:intergenic
ATTTCCATTGATGAACCAAC+AGG 0.472835 7.1:+16296820 MS.gene42548:CDS
TATGTAAAGGTAAGGACTCT+AGG 0.474049 7.1:-16296393 None:intergenic
TGCAGAAGATGAAGTAAAAG+TGG 0.475378 7.1:-16295000 None:intergenic
TACTCGTGTTAGATGACGTA+TGG 0.475844 7.1:+16295120 MS.gene42548:CDS
TTGATAAAAGTTGGTGCACC+GGG 0.476438 7.1:+16295179 MS.gene42548:CDS
TAATTGTAGGAGTTTGCAAA+TGG 0.477404 7.1:-16296134 None:intergenic
GAGTTTGAAAATTTGCCAAA+AGG 0.478816 7.1:+16296184 MS.gene42548:CDS
GATTAAGGATAGATTGGATA+AGG 0.479309 7.1:+16294617 MS.gene42548:CDS
AGATGAAGTAAAAGTGGAAG+TGG 0.480096 7.1:-16294994 None:intergenic
CATGGCAGAATCATTTGTCC+TGG 0.481745 7.1:+16294242 None:intergenic
ATGGCACATACAATCCATTC+TGG 0.489523 7.1:-16296550 None:intergenic
CTTTGTTGCATAACGAGTCC+AGG 0.491529 7.1:-16294681 None:intergenic
AGAAAATGTCAGCGCCAATC+TGG 0.493744 7.1:+16296763 MS.gene42548:CDS
CCTAATGTTCTCACGGCTAG+CGG 0.495512 7.1:-16295404 None:intergenic
TCACGGCTAGCGGGACCCCT+TGG 0.500835 7.1:-16295394 None:intergenic
TTTAAGACCTAATCCTGAGA+TGG 0.501748 7.1:-16295948 None:intergenic
TTGGATAAGGTGGCAGCTGA+TGG 0.504962 7.1:+16294630 MS.gene42548:CDS
AAAAGCATGGGCTGCGCGAA+TGG 0.505597 7.1:+16294415 MS.gene42548:CDS
AAATTTCATAACTTCTAAAG+AGG 0.505720 7.1:-16295604 None:intergenic
AAATACATTTCTTCAATGGA+AGG 0.505774 7.1:-16296355 None:intergenic
AGGGAAAATATGTAAAGGTA+AGG 0.509945 7.1:-16296401 None:intergenic
CTTAAGAGGCTCTACATAGT+TGG 0.510227 7.1:+16296652 MS.gene42548:CDS
CAATTATGCGAAAATCTTCA+AGG 0.511127 7.1:-16296723 None:intergenic
TAGCGGTAGACTCGCATACT+CGG 0.513382 7.1:+16295825 MS.gene42548:CDS
TTCTGGAAGCACACGGGTGA+AGG 0.517908 7.1:+16294527 MS.gene42548:CDS
CATCCTCACGGCGATGGTGA+TGG 0.519995 7.1:+16294792 MS.gene42548:CDS
ATGTACTTTGAAATAACAAA+AGG 0.521754 7.1:-16295756 None:intergenic
TGTAGTCTTTGGGTAGCACT+TGG 0.525736 7.1:+16295626 MS.gene42548:CDS
TTTGATAAAAGTTGGTGCAC+CGG 0.526168 7.1:+16295178 MS.gene42548:CDS
CCTAAATGGAGGTGAAATGC+TGG 0.527446 7.1:+16295661 MS.gene42548:CDS
ACACTTGAAGCATCAATATG+AGG 0.528353 7.1:-16294717 None:intergenic
CTAATGTTCTCACGGCTAGC+GGG 0.528784 7.1:-16295403 None:intergenic
CTTCCGTATCTAGTAGAGAA+AGG 0.529087 7.1:+16295260 MS.gene42548:CDS
AACTCAATTGCTTTGATGAT+GGG 0.534902 7.1:+16295230 MS.gene42548:CDS
CATGAACACTTTAGAGACCT+TGG 0.535176 7.1:+16296570 MS.gene42548:CDS
CGTTACGCCTCCTCTCCTGT+TGG 0.535715 7.1:-16296835 None:intergenic
AGACCTTTCTCTACTAGATA+CGG 0.537913 7.1:-16295263 None:intergenic
TGCAAGAAGGATCAAAAGCA+TGG 0.538174 7.1:+16294402 MS.gene42548:CDS
TAAGGATAGATTGGATAAGG+TGG 0.538888 7.1:+16294620 MS.gene42548:CDS
GTGAGGCGATGCATGTCACT+TGG 0.541796 7.1:-16296697 None:intergenic
AATACATTTCTTCAATGGAA+GGG 0.541921 7.1:-16296354 None:intergenic
TTAGAAAACATAAACAACTT+AGG 0.543055 7.1:+16295044 MS.gene42548:CDS
AGCGCCAATCTGGTGAGTAT+TGG 0.543382 7.1:+16296773 MS.gene42548:CDS
TGGGCCAATACTCACCAGAT+TGG 0.547517 7.1:-16296777 None:intergenic
ACAGTGAATTAGCAATATCC+AGG 0.551502 7.1:-16294260 None:intergenic
TCATCTTCTGCACCATCAAG+TGG 0.552062 7.1:+16295011 MS.gene42548:CDS
AGAGAAAGGTCTTTCTCCAA+AGG 0.552100 7.1:+16295274 MS.gene42548:CDS
TTAAGACCTAATCCTGAGAT+GGG 0.554106 7.1:-16295947 None:intergenic
TTTAGCAATTGAATTGGGCA+TGG 0.555165 7.1:-16296050 None:intergenic
GTCAAATGGGCATTCAAGGA+AGG 0.557156 7.1:+16295314 MS.gene42548:CDS
TCTGGTAAGGTCACAAGCGT+TGG 0.566065 7.1:-16296532 None:intergenic
CAGCCACATCCTCACGGCGA+TGG 0.571581 7.1:+16294786 MS.gene42548:CDS
ACATACAATCCATTCTGGTA+AGG 0.572418 7.1:-16296545 None:intergenic
AATCCAAATCTAGTAGAGAT+CGG 0.574936 7.1:+16295350 MS.gene42548:CDS
TACAAGATTTGAATCTCAGT+GGG 0.576326 7.1:+16296155 MS.gene42548:CDS
TGGTTACAGTCAGACGGCAA+AGG 0.576724 7.1:-16296225 None:intergenic
ATTCAGGATGTATCTGACGT+TGG 0.577869 7.1:+16295731 MS.gene42548:CDS
GTCATTGTAGATAGAAACAC+TGG 0.593071 7.1:-16296625 None:intergenic
TGCTTTGTATGTTTCAACAG+AGG 0.600070 7.1:+16295796 MS.gene42548:CDS
ATGCTTCAAGTGTAATAGGA+AGG 0.601629 7.1:+16294727 MS.gene42548:CDS
AGAACTTCCTAATGTTCTCA+CGG 0.605741 7.1:-16295411 None:intergenic
AATTATGCGAAAATCTTCAA+GGG 0.609813 7.1:-16296722 None:intergenic
CAGGACAAATGATTCTGCCA+TGG 0.610415 7.1:-16294241 None:intergenic
TGGAAGCTTCTGGAAGCACA+CGG 0.611015 7.1:+16294520 MS.gene42548:CDS
AATTTAGGGAAAATATGTAA+AGG 0.611893 7.1:-16296406 None:intergenic
TGATGAACCAACAGGAGAGG+AGG 0.613851 7.1:+16296828 MS.gene42548:CDS
GATTTGATGTGAGCAATCAT+GGG 0.614442 7.1:-16296796 None:intergenic
TTGATGCAGCCACATCCTCA+CGG 0.620384 7.1:+16294780 MS.gene42548:CDS
GCAAGAAGGATCAAAAGCAT+GGG 0.625513 7.1:+16294403 MS.gene42548:CDS
GACACTCTCTCAATTGTCAG+TGG 0.632709 7.1:+16294360 MS.gene42548:CDS
CATTGATGAACCAACAGGAG+AGG 0.632905 7.1:+16296825 MS.gene42548:CDS
TTACAAGATTTGAATCTCAG+TGG 0.637604 7.1:+16296154 MS.gene42548:CDS
GGAATGATGATCGTGGAAAG+TGG 0.639193 7.1:+16295141 MS.gene42548:CDS
AGAAAAGCGAAAGCAAGTCG+TGG 0.643434 7.1:+16294500 MS.gene42548:CDS
AGGAATACTATTGATTACCA+AGG 0.644383 7.1:-16296587 None:intergenic
GATAAATGCCTTACTTGCTG+AGG 0.646499 7.1:-16295854 None:intergenic
AAAGTCCAATCCAAACATTG+AGG 0.650293 7.1:+16296482 MS.gene42548:CDS
GGAAGCTTCTGGAAGCACAC+GGG 0.650542 7.1:+16294521 MS.gene42548:CDS
ATGTGTATAAAGATCTACAA+GGG 0.670855 7.1:+16294331 MS.gene42548:CDS
GTTGGATGCTGAGTGCAAGA+AGG 0.673202 7.1:+16294389 MS.gene42548:CDS
TTAGTTCAATCCCTAAATGG+AGG 0.676356 7.1:+16295650 MS.gene42548:CDS
AATTAGAGGAAGAAAACAAG+TGG 0.677267 7.1:-16294554 None:intergenic
GATGTGTATAAAGATCTACA+AGG 0.685115 7.1:+16294330 MS.gene42548:CDS
GAAAATCTTCAAGGGCGGTG+AGG 0.694798 7.1:-16296714 None:intergenic
TATGCGAAAATCTTCAAGGG+CGG 0.704356 7.1:-16296719 None:intergenic
GACGTATGGAATGATGATCG+TGG 0.705325 7.1:+16295134 MS.gene42548:CDS
TCACCATCACCATCGCCGTG+AGG 0.710882 7.1:-16294795 None:intergenic
TTCAACAGAGGACTTCGTAG+CGG 0.718175 7.1:+16295808 MS.gene42548:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATCATAACTTAATTTTA+GGG - chr7.1:16295528-16295547 None:intergenic 15.0%
!!! TTTAATTTAGCAATTGAATT+GGG - chr7.1:16296058-16296077 None:intergenic 15.0%
!!! TTTGATCATAACTTAATTTT+AGG - chr7.1:16295529-16295548 None:intergenic 15.0%
!!! TTTTAATTTAGCAATTGAAT+TGG - chr7.1:16296059-16296078 None:intergenic 15.0%
!! AATTTAGGGAAAATATGTAA+AGG - chr7.1:16296409-16296428 None:intergenic 20.0%
!! TTAGAAAACATAAACAACTT+AGG + chr7.1:16295044-16295063 MS.gene42548:CDS 20.0%
!! TTATGAAATTTGTAGTCTTT+GGG + chr7.1:16295616-16295635 MS.gene42548:CDS 20.0%
!! TTCAAAATACATTTCTTCAA+TGG - chr7.1:16296362-16296381 None:intergenic 20.0%
!! TTGAAAGATTTGATAAAAGT+TGG + chr7.1:16295170-16295189 MS.gene42548:CDS 20.0%
!!! AAATTTCATAACTTCTAAAG+AGG - chr7.1:16295607-16295626 None:intergenic 20.0%
!!! ATGTACTTTGAAATAACAAA+AGG - chr7.1:16295759-16295778 None:intergenic 20.0%
!!! TATCCTTAATCTTTTTGATT+TGG - chr7.1:16294608-16294627 None:intergenic 20.0%
! AAAATTTGCCAAAAGGATTA+GGG + chr7.1:16296191-16296210 MS.gene42548:CDS 25.0%
! AAACTTCGATATAAGTAAGT+GGG + chr7.1:16295442-16295461 MS.gene42548:intron 25.0%
! AAATACATTTCTTCAATGGA+AGG - chr7.1:16296358-16296377 None:intergenic 25.0%
! AAATTGTGAAAAAATGCCAA+GGG + chr7.1:16295378-16295397 MS.gene42548:CDS 25.0%
! AATACATTTCTTCAATGGAA+GGG - chr7.1:16296357-16296376 None:intergenic 25.0%
! AATTATGCGAAAATCTTCAA+GGG - chr7.1:16296725-16296744 None:intergenic 25.0%
! ATGAAACATTTGTATCTTCT+GGG + chr7.1:16296505-16296524 MS.gene42548:CDS 25.0%
! ATGTGTATAAAGATCTACAA+GGG + chr7.1:16294331-16294350 MS.gene42548:CDS 25.0%
! CAAAAAGATTAAGGATAGAT+TGG + chr7.1:16294611-16294630 MS.gene42548:CDS 25.0%
! CTTTCTGATGTTGAAATAAT+CGG - chr7.1:16294946-16294965 None:intergenic 25.0%
! GATTCAAATCTTGTAATTGT+AGG - chr7.1:16296150-16296169 None:intergenic 25.0%
! GTACAAATATTTGCGTTATT+TGG + chr7.1:16296003-16296022 MS.gene42548:CDS 25.0%
! GTTATGAAATTTGTAGTCTT+TGG + chr7.1:16295615-16295634 MS.gene42548:CDS 25.0%
! TAGATCTTTATACACATCAT+AGG - chr7.1:16294328-16294347 None:intergenic 25.0%
! TTTATCTCTGTTTGTCAAAT+GGG + chr7.1:16295301-16295320 MS.gene42548:CDS 25.0%
!!! GAAATGTATTTTGAATCATG+TGG + chr7.1:16296367-16296386 MS.gene42548:CDS 25.0%
!!! TGTTAAAACAGATTGTTTTG+TGG - chr7.1:16296248-16296267 None:intergenic 25.0%
AACAGAGATAAACAATCCTT+TGG - chr7.1:16295293-16295312 None:intergenic 30.0%
AATCCAAATCTAGTAGAGAT+CGG + chr7.1:16295350-16295369 MS.gene42548:CDS 30.0%
AATGTTTCATCCTCAATGTT+TGG - chr7.1:16296495-16296514 None:intergenic 30.0%
AATTAGAGGAAGAAAACAAG+TGG - chr7.1:16294557-16294576 None:intergenic 30.0%
AATTGTGAAAAAATGCCAAG+GGG + chr7.1:16295379-16295398 MS.gene42548:CDS 30.0%
AGGGAAAATATGTAAAGGTA+AGG - chr7.1:16296404-16296423 None:intergenic 30.0%
AGTATATTATTTCCCATCTC+AGG + chr7.1:16295935-16295954 MS.gene42548:CDS 30.0%
ATGTGCAAAGTCTGTAATTT+AGG - chr7.1:16296424-16296443 None:intergenic 30.0%
ATTGATGCTTCAAGTGTAAT+AGG + chr7.1:16294723-16294742 MS.gene42548:CDS 30.0%
CAAACTTCGATATAAGTAAG+TGG + chr7.1:16295441-16295460 MS.gene42548:intron 30.0%
CAATTATGCGAAAATCTTCA+AGG - chr7.1:16296726-16296745 None:intergenic 30.0%
GAAAACTCAAATCTTGAAGA+TGG - chr7.1:16296294-16296313 None:intergenic 30.0%
GAAAATTTGCCAAAAGGATT+AGG + chr7.1:16296190-16296209 MS.gene42548:CDS 30.0%
GAAATTGTGAAAAAATGCCA+AGG + chr7.1:16295377-16295396 MS.gene42548:CDS 30.0%
GACTTTCATTGTTCAATAAC+AGG - chr7.1:16296468-16296487 None:intergenic 30.0%
GAGTTTGAAAATTTGCCAAA+AGG + chr7.1:16296184-16296203 MS.gene42548:CDS 30.0%
GATATTGCTAATTCACTGTT+AGG + chr7.1:16294264-16294283 MS.gene42548:CDS 30.0%
GATGAAACATTTGTATCTTC+TGG + chr7.1:16296504-16296523 MS.gene42548:CDS 30.0%
GATGTGTATAAAGATCTACA+AGG + chr7.1:16294330-16294349 MS.gene42548:CDS 30.0%
GATTAAGGATAGATTGGATA+AGG + chr7.1:16294617-16294636 MS.gene42548:CDS 30.0%
GCACCAAATCAAAAAGATTA+AGG + chr7.1:16294602-16294621 MS.gene42548:CDS 30.0%
GCATTCAAGATCATTTATTC+AGG + chr7.1:16295715-16295734 MS.gene42548:CDS 30.0%
GTTTATCTCTGTTTGTCAAA+TGG + chr7.1:16295300-16295319 MS.gene42548:CDS 30.0%
TAACTCAATTGCTTTGATGA+TGG + chr7.1:16295229-16295248 MS.gene42548:CDS 30.0%
TAATTGTAGGAGTTTGCAAA+TGG - chr7.1:16296137-16296156 None:intergenic 30.0%
TACAAGATTTGAATCTCAGT+GGG + chr7.1:16296155-16296174 MS.gene42548:CDS 30.0%
TGTGCAAAGTCTGTAATTTA+GGG - chr7.1:16296423-16296442 None:intergenic 30.0%
TTACAAGATTTGAATCTCAG+TGG + chr7.1:16296154-16296173 MS.gene42548:CDS 30.0%
! AAACATTGTCTGAGATATGA+TGG - chr7.1:16295554-16295573 None:intergenic 30.0%
! AACTCAATTGCTTTGATGAT+GGG + chr7.1:16295230-16295249 MS.gene42548:CDS 30.0%
! AGGAATACTATTGATTACCA+AGG - chr7.1:16296590-16296609 None:intergenic 30.0%
! TAAGTAAGTGGGAATTTGTT+AGG + chr7.1:16295453-16295472 MS.gene42548:intron 30.0%
! TTCTGAATGAATGGATTTCA+AGG + chr7.1:16295981-16296000 MS.gene42548:CDS 30.0%
!! AAGTAAGTGGGAATTTGTTA+GGG + chr7.1:16295454-16295473 MS.gene42548:intron 30.0%
!! CAAATCTTGAAGATGGATTA+AGG - chr7.1:16296287-16296306 None:intergenic 30.0%
!!! ACTTGCTTTCCGTTTTAAAA+TGG + chr7.1:16294578-16294597 MS.gene42548:CDS 30.0%
!!! TCATAACTTAATTTTAGGGC+AGG - chr7.1:16295524-16295543 None:intergenic 30.0%
AAACCTCCAATTCACACTAT+TGG - chr7.1:16294840-16294859 None:intergenic 35.0%
AAAGTCCAATCCAAACATTG+AGG + chr7.1:16296482-16296501 MS.gene42548:CDS 35.0%
AATAGTGTGAATTGGAGGTT+TGG + chr7.1:16294839-16294858 MS.gene42548:intron 35.0%
AATTGAGCAAAACCACTTGA+TGG - chr7.1:16295026-16295045 None:intergenic 35.0%
AATTGTCAGTGGTGTATTGT+TGG + chr7.1:16294371-16294390 MS.gene42548:CDS 35.0%
ACAGTGAATTAGCAATATCC+AGG - chr7.1:16294263-16294282 None:intergenic 35.0%
ACATACAATCCATTCTGGTA+AGG - chr7.1:16296548-16296567 None:intergenic 35.0%
AGAACTTCCTAATGTTCTCA+CGG - chr7.1:16295414-16295433 None:intergenic 35.0%
AGACCTTTCTCTACTAGATA+CGG - chr7.1:16295266-16295285 None:intergenic 35.0%
AGATGAAGTAAAAGTGGAAG+TGG - chr7.1:16294997-16295016 None:intergenic 35.0%
AGGAGTTTGCAAATGGAATT+TGG - chr7.1:16296130-16296149 None:intergenic 35.0%
ATAGTGTGAATTGGAGGTTT+GGG + chr7.1:16294840-16294859 MS.gene42548:intron 35.0%
ATGCTTCAAGTGTAATAGGA+AGG + chr7.1:16294727-16294746 MS.gene42548:CDS 35.0%
ATTCCAATAGTGTGAATTGG+AGG + chr7.1:16294834-16294853 MS.gene42548:intron 35.0%
ATTTCCATTGATGAACCAAC+AGG + chr7.1:16296820-16296839 MS.gene42548:CDS 35.0%
GATGCTGAAGATGTATTTGA+TGG + chr7.1:16294465-16294484 MS.gene42548:CDS 35.0%
GATTTGATGTGAGCAATCAT+GGG - chr7.1:16296799-16296818 None:intergenic 35.0%
GTCATTCCAATAGTGTGAAT+TGG + chr7.1:16294831-16294850 MS.gene42548:intron 35.0%
GTCATTGTAGATAGAAACAC+TGG - chr7.1:16296628-16296647 None:intergenic 35.0%
GTGAAAGTCTTCTGAATGAA+TGG + chr7.1:16295972-16295991 MS.gene42548:CDS 35.0%
TAAGGATAGATTGGATAAGG+TGG + chr7.1:16294620-16294639 MS.gene42548:CDS 35.0%
TATGTAAAGGTAAGGACTCT+AGG - chr7.1:16296396-16296415 None:intergenic 35.0%
TGATTTGATGTGAGCAATCA+TGG - chr7.1:16296800-16296819 None:intergenic 35.0%
TGCAGAAGATGAAGTAAAAG+TGG - chr7.1:16295003-16295022 None:intergenic 35.0%
TGCTTTGTATGTTTCAACAG+AGG + chr7.1:16295796-16295815 MS.gene42548:CDS 35.0%
TTAAGACCTAATCCTGAGAT+GGG - chr7.1:16295950-16295969 None:intergenic 35.0%
TTAGTTCAATCCCTAAATGG+AGG + chr7.1:16295650-16295669 MS.gene42548:CDS 35.0%
TTATTTCCCATCTCAGGATT+AGG + chr7.1:16295941-16295960 MS.gene42548:CDS 35.0%
TTCATCCTCAATGTTTGGAT+TGG - chr7.1:16296490-16296509 None:intergenic 35.0%
TTCTCACACTTCTAGACTTT+GGG - chr7.1:16295916-16295935 None:intergenic 35.0%
TTTAGCAATTGAATTGGGCA+TGG - chr7.1:16296053-16296072 None:intergenic 35.0%
TTTCCGATCTCTACTAGATT+TGG - chr7.1:16295356-16295375 None:intergenic 35.0%
! AACTTTTCCAGTTGAAGATG+TGG + chr7.1:16294910-16294929 MS.gene42548:intron 35.0%
! ACACTTGAAGCATCAATATG+AGG - chr7.1:16294720-16294739 None:intergenic 35.0%
! ACTTTTCCAGTTGAAGATGT+GGG + chr7.1:16294911-16294930 MS.gene42548:intron 35.0%
! CAGAAAGTTTTTGTGTCAGA+CGG - chr7.1:16295088-16295107 None:intergenic 35.0%
! TTTAAGACCTAATCCTGAGA+TGG - chr7.1:16295951-16295970 None:intergenic 35.0%
!! ACTGGAAGCATCTTTAGATT+AGG - chr7.1:16296610-16296629 None:intergenic 35.0%
!! ATTAGCTTCCCTAATCCTTT+TGG - chr7.1:16296202-16296221 None:intergenic 35.0%
!! GGATTAGTTCAATCCCTAAA+TGG + chr7.1:16295647-16295666 MS.gene42548:CDS 35.0%
!! TTTGATAAAAGTTGGTGCAC+CGG + chr7.1:16295178-16295197 MS.gene42548:CDS 35.0%
!! TTTGGTGCGCCATTTTAAAA+CGG - chr7.1:16294590-16294609 None:intergenic 35.0%
AAAGACCACACTTGCAAAGT+CGG + chr7.1:16294863-16294882 MS.gene42548:intron 40.0%
ACGGAAAGCAAGTGAATTAG+AGG - chr7.1:16294571-16294590 None:intergenic 40.0%
AGAGAAAGGTCTTTCTCCAA+AGG + chr7.1:16295274-16295293 MS.gene42548:CDS 40.0%
ATGGCACATACAATCCATTC+TGG - chr7.1:16296553-16296572 None:intergenic 40.0%
ATTCAGGATGTATCTGACGT+TGG + chr7.1:16295731-16295750 MS.gene42548:CDS 40.0%
CAGCATTTCACCTCCATTTA+GGG - chr7.1:16295663-16295682 None:intergenic 40.0%
CGTCTGACACAAAAACTTTC+TGG + chr7.1:16295086-16295105 MS.gene42548:CDS 40.0%
CTACAATGACTCGTCTTAAG+AGG + chr7.1:16296638-16296657 MS.gene42548:CDS 40.0%
CTTAAGAGGCTCTACATAGT+TGG + chr7.1:16296652-16296671 MS.gene42548:CDS 40.0%
CTTCCGTATCTAGTAGAGAA+AGG + chr7.1:16295260-16295279 MS.gene42548:CDS 40.0%
CTTCTCACACTTCTAGACTT+TGG - chr7.1:16295917-16295936 None:intergenic 40.0%
GGAATATACCTCAGCAAGTA+AGG + chr7.1:16295846-16295865 MS.gene42548:CDS 40.0%
GGTCTTACAAATGTTGATCC+TGG + chr7.1:16294663-16294682 MS.gene42548:CDS 40.0%
GGTGTTCAATGATAAGAGGA+TGG + chr7.1:16294884-16294903 MS.gene42548:intron 40.0%
GTTTGTCAAATGGGCATTCA+AGG + chr7.1:16295310-16295329 MS.gene42548:CDS 40.0%
TACTCGTGTTAGATGACGTA+TGG + chr7.1:16295120-16295139 MS.gene42548:CDS 40.0%
TATGCGAAAATCTTCAAGGG+CGG - chr7.1:16296722-16296741 None:intergenic 40.0%
TGCAAGAAGGATCAAAAGCA+TGG + chr7.1:16294402-16294421 MS.gene42548:CDS 40.0%
! ACTTCTAAAGAGGCGATCTT+TGG - chr7.1:16295597-16295616 None:intergenic 40.0%
! AGTCGGTGTTCAATGATAAG+AGG + chr7.1:16294880-16294899 MS.gene42548:intron 40.0%
! CATGAACACTTTAGAGACCT+TGG + chr7.1:16296570-16296589 MS.gene42548:CDS 40.0%
! CTTCTAAAGAGGCGATCTTT+GGG - chr7.1:16295596-16295615 None:intergenic 40.0%
! GATAAATGCCTTACTTGCTG+AGG - chr7.1:16295857-16295876 None:intergenic 40.0%
! GCAAGAAGGATCAAAAGCAT+GGG + chr7.1:16294403-16294422 MS.gene42548:CDS 40.0%
! GTCACCATAATTTTGCTTCC+CGG - chr7.1:16295200-16295219 None:intergenic 40.0%
! GTTTTGTGGTTACAGTCAGA+CGG - chr7.1:16296234-16296253 None:intergenic 40.0%
! TGACATTTTCTGCTCAACTC+AGG - chr7.1:16296754-16296773 None:intergenic 40.0%
!! CAAGGTCTCTAAAGTGTTCA+TGG - chr7.1:16296572-16296591 None:intergenic 40.0%
!! TTGATAAAAGTTGGTGCACC+GGG + chr7.1:16295179-16295198 MS.gene42548:CDS 40.0%
AGAAAAGCGAAAGCAAGTCG+TGG + chr7.1:16294500-16294519 MS.gene42548:CDS 45.0%
AGAAAATGTCAGCGCCAATC+TGG + chr7.1:16296763-16296782 MS.gene42548:CDS 45.0%
CATTGATGAACCAACAGGAG+AGG + chr7.1:16296825-16296844 MS.gene42548:CDS 45.0%
CCAGCATTTCACCTCCATTT+AGG - chr7.1:16295664-16295683 None:intergenic 45.0%
CCTAAATGGAGGTGAAATGC+TGG + chr7.1:16295661-16295680 MS.gene42548:CDS 45.0%
CTTTGTTGCATAACGAGTCC+AGG - chr7.1:16294684-16294703 None:intergenic 45.0%
GACACTCTCTCAATTGTCAG+TGG + chr7.1:16294360-16294379 MS.gene42548:CDS 45.0%
GACGTATGGAATGATGATCG+TGG + chr7.1:16295134-16295153 MS.gene42548:CDS 45.0%
GGAATGATGATCGTGGAAAG+TGG + chr7.1:16295141-16295160 MS.gene42548:CDS 45.0%
GTCAAATGGGCATTCAAGGA+AGG + chr7.1:16295314-16295333 MS.gene42548:CDS 45.0%
TACACACCCACATCTTCAAC+TGG - chr7.1:16294920-16294939 None:intergenic 45.0%
TCATCTTCTGCACCATCAAG+TGG + chr7.1:16295011-16295030 MS.gene42548:CDS 45.0%
TGCACCGGGAAGCAAAATTA+TGG + chr7.1:16295193-16295212 MS.gene42548:CDS 45.0%
TGTAGTCTTTGGGTAGCACT+TGG + chr7.1:16295626-16295645 MS.gene42548:CDS 45.0%
TTCAACAGAGGACTTCGTAG+CGG + chr7.1:16295808-16295827 MS.gene42548:CDS 45.0%
!! AGAGGCGATCTTTGGGATAA+AGG - chr7.1:16295589-16295608 None:intergenic 45.0%
!! CTCTCCTGTTGGTTCATCAA+TGG - chr7.1:16296827-16296846 None:intergenic 45.0%
!! GAGGCGATCTTTGGGATAAA+GGG - chr7.1:16295588-16295607 None:intergenic 45.0%
!! TTGTTAGGGACTCTGAGATG+TGG + chr7.1:16295468-16295487 MS.gene42548:intron 45.0%
AAGCAAGTCGTGGAAGCTTC+TGG + chr7.1:16294510-16294529 MS.gene42548:CDS 50.0%
AGCGCCAATCTGGTGAGTAT+TGG + chr7.1:16296773-16296792 MS.gene42548:CDS 50.0%
CCTAATGTTCTCACGGCTAG+CGG - chr7.1:16295407-16295426 None:intergenic 50.0%
CGCTTGTGACCTTACCAGAA+TGG + chr7.1:16296536-16296555 MS.gene42548:CDS 50.0%
CTAATGTTCTCACGGCTAGC+GGG - chr7.1:16295406-16295425 None:intergenic 50.0%
GAAAATCTTCAAGGGCGGTG+AGG - chr7.1:16296717-16296736 None:intergenic 50.0%
GTTGGATGCTGAGTGCAAGA+AGG + chr7.1:16294389-16294408 MS.gene42548:CDS 50.0%
TAGCGGTAGACTCGCATACT+CGG + chr7.1:16295825-16295844 MS.gene42548:CDS 50.0%
TCTGGTAAGGTCACAAGCGT+TGG - chr7.1:16296535-16296554 None:intergenic 50.0%
TGATGAACCAACAGGAGAGG+AGG + chr7.1:16296828-16296847 MS.gene42548:CDS 50.0%
TGGGCCAATACTCACCAGAT+TGG - chr7.1:16296780-16296799 None:intergenic 50.0%
TGGTTACAGTCAGACGGCAA+AGG - chr7.1:16296228-16296247 None:intergenic 50.0%
TTGATGCAGCCACATCCTCA+CGG + chr7.1:16294780-16294799 MS.gene42548:CDS 50.0%
TTGGATAAGGTGGCAGCTGA+TGG + chr7.1:16294630-16294649 MS.gene42548:CDS 50.0%
! TGGAAGCTTCTGGAAGCACA+CGG + chr7.1:16294520-16294539 MS.gene42548:CDS 50.0%
!! GAACACCGACTTTGCAAGTG+TGG - chr7.1:16294871-16294890 None:intergenic 50.0%
CCGCTAGCCGTGAGAACATT+AGG + chr7.1:16295404-16295423 MS.gene42548:CDS 55.0%
GCAGCTGATGGAGTCAGGTT+TGG + chr7.1:16294642-16294661 MS.gene42548:CDS 55.0%
GTGAGGCGATGCATGTCACT+TGG - chr7.1:16296700-16296719 None:intergenic 55.0%
! AAAAGCATGGGCTGCGCGAA+TGG + chr7.1:16294415-16294434 MS.gene42548:CDS 55.0%
! GGAAGCTTCTGGAAGCACAC+GGG + chr7.1:16294521-16294540 MS.gene42548:CDS 55.0%
! TTCTGGAAGCACACGGGTGA+AGG + chr7.1:16294527-16294546 MS.gene42548:CDS 55.0%
AGGTGGCAGCTGATGGAGTC+AGG + chr7.1:16294637-16294656 MS.gene42548:CDS 60.0%
CATCCTCACGGCGATGGTGA+TGG + chr7.1:16294792-16294811 MS.gene42548:CDS 60.0%
TCACCATCACCATCGCCGTG+AGG - chr7.1:16294798-16294817 None:intergenic 60.0%
TCACCATCGCCGTGAGGATG+TGG - chr7.1:16294792-16294811 None:intergenic 60.0%
CAGCCACATCCTCACGGCGA+TGG + chr7.1:16294786-16294805 MS.gene42548:CDS 65.0%
! ATGGGCTGCGCGAATGGCTG+AGG + chr7.1:16294421-16294440 MS.gene42548:CDS 65.0%
TCACGGCTAGCGGGACCCCT+TGG - chr7.1:16295397-16295416 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 16294243 16296855 16294243 ID=MS.gene42548
chr7.1 mRNA 16294243 16296855 16294243 ID=MS.gene42548.t1;Parent=MS.gene42548
chr7.1 exon 16294243 16294842 16294243 ID=MS.gene42548.t1.exon1;Parent=MS.gene42548.t1
chr7.1 CDS 16294243 16294842 16294243 ID=cds.MS.gene42548.t1;Parent=MS.gene42548.t1
chr7.1 exon 16294921 16295455 16294921 ID=MS.gene42548.t1.exon2;Parent=MS.gene42548.t1
chr7.1 CDS 16294921 16295455 16294921 ID=cds.MS.gene42548.t1;Parent=MS.gene42548.t1
chr7.1 exon 16295600 16296855 16295600 ID=MS.gene42548.t1.exon3;Parent=MS.gene42548.t1
chr7.1 CDS 16295600 16296855 16295600 ID=cds.MS.gene42548.t1;Parent=MS.gene42548.t1
Gene Sequence

>MS.gene42548

ATGGCAGAATCATTTGTCCTGGATATTGCTAATTCACTGTTAGGAAAACTTGCTTCTTATGCTTATGAAGAAGCTTCTCGAGCCTATGATGTGTATAAAGATCTACAAGGGTTCAAAGACACTCTCTCAATTGTCAGTGGTGTATTGTTGGATGCTGAGTGCAAGAAGGATCAAAAGCATGGGCTGCGCGAATGGCTGAGGCAGATTCAAAATATATGCTATGATGCTGAAGATGTATTTGATGGATTTGATGTGCAAGAAAAGCGAAAGCAAGTCGTGGAAGCTTCTGGAAGCACACGGGTGAAGGTACGCCACTTGTTTTCTTCCTCTAATTCACTTGCTTTCCGTTTTAAAATGGCGCACCAAATCAAAAAGATTAAGGATAGATTGGATAAGGTGGCAGCTGATGGAGTCAGGTTTGGTCTTACAAATGTTGATCCTGGACTCGTTATGCAACAAAGAGAAATGACATATCCTCATATTGATGCTTCAAGTGTAATAGGAAGGCAAAATGAGCAAGATCAAATTATCAATCTTTTGATGCAGCCACATCCTCACGGCGATGGTGATGGTGATAAAAGTCTGTGTGTCATTCCAATAGTGTGAATTGGAGGTTTGGGAAAGACCACACTTGCAAAGTCGGTGTTCAATGATAAGAGGATGGATCAACTTTTCCAGTTGAAGATGTGGGTGTGTATCTCCGATTATTTCAACATCAGAAAGATAATCATTAATATCATCAACTCTGAAACCACTTCCACTTTTACTTCATCTTCTGCACCATCAAGTGGTTTTGCTCAATTAGAAAACATAAACAACTTAGGCATTGTGCAGCTAGTAAGCCGTCTGACACAAAAACTTTCTGGTCAAAAGTTTTTACTCGTGTTAGATGACGTATGGAATGATGATCGTGGAAAGTGGCTTGAATTGAAAGATTTGATAAAAGTTGGTGCACCGGGAAGCAAAATTATGGTGACAACACGTAGTAACTCAATTGCTTTGATGATGGGTGATGTTCTTCCGTATCTAGTAGAGAAAGGTCTTTCTCCAAAGGATTGTTTATCTCTGTTTGTCAAATGGGCATTCAAGGAAGGTGAAGAAAAAAAAAATCCAAATCTAGTAGAGATCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTCCCGCTAGCCGTGAGAACATTAGGAAGTTCTCTCTTCTCAAACTTCGATATAAGTAAGTGGGAATTTGTTAGGGACTCTGAGATGTGGAATTTAGAACAAAAGAAAAATGATATTTTACCTGCCCTAAAATTAAGTTATGATCAAATGCCATCATATCTCAGACAATGTTTTGCTTATTTTTCCCTTTATCCCAAAGATCGCCTCTTTAGAAGTTATGAAATTTGTAGTCTTTGGGTAGCACTTGGATTAGTTCAATCCCTAAATGGAGGTGAAATGCTGGAGAGTATTGCAAGAAAATATATTGATGAGTTGCATTCAAGATCATTTATTCAGGATGTATCTGACGTTGGCTCCTTTTGTTATTTCAAAGTACATGATTTGATACATGATCTTGCTTTGTATGTTTCAACAGAGGACTTCGTAGCGGTAGACTCGCATACTCGGAATATACCTCAGCAAGTAAGGCATTTATCAGTTGTTGAAGATGATTCACTTGACGTTAATTTGATCCCAAAGTCTAGAAGTGTGAGAAGTATATTATTTCCCATCTCAGGATTAGGTCTTAAAAGTGAAAGTCTTCTGAATGAATGGATTTCAAGGTACAAATATTTGCGTTATTTGGATTTAACTGATTCTTCATTTGAAACCATGCCCAATTCAATTGCTAAATTAAAACACTTGCGAGTTCTCGATCTTTCTCGCAATCGCAAAATCAGAACACTACCAAATTCCATTTGCAAACTCCTACAATTACAAGATTTGAATCTCAGTGGGTGCACAGAGTTTGAAAATTTGCCAAAAGGATTAGGGAAGCTAATCAGCCTTTGCCGTCTGACTGTAACCACAAAACAATCTGTTTTAACACTTGATGAATTTGTAACCTTAATCCATCTTCAAGATTTGAGTTTTCATTATTGTGACAACATAAAGTTTTTGTTTAGACATCAACTCCCTTCCATTGAAGAAATGTATTTTGAATCATGTGGTAGCCTAGAGTCCTTACCTTTACATATTTTCCCTAAATTACAGACTTTGCACATTCGCAACTGTGAGAAGTTAAACCTGTTATTGAACAATGAAAGTCCAATCCAAACATTGAGGATGAAACATTTGTATCTTCTGGGTTTTCCAACGCTTGTGACCTTACCAGAATGGATTGTATGTGCCATGAACACTTTAGAGACCTTGGTAATCAATAGTATTCCTAATCTAAAGATGCTTCCAGTGTTTCTATCTACAATGACTCGTCTTAAGAGGCTCTACATAGTTGGCTGTCGTCAACTGTTGAGTCTTCCAAGTGACATGCATCGCCTCACCGCCCTTGAAGATTTTCGCATAATTGCTTGTCCTGAGTTGAGCAGAAAATGTCAGCGCCAATCTGGTGAGTATTGGCCCATGATTGCTCACATCAAATCAATTTCCATTGATGAACCAACAGGAGAGGAGGCGTAA

Protein sequence

>MS.gene42548.t1

MAESFVLDIANSLLGKLASYAYEEASRAYDVYKDLQGFKDTLSIVSGVLLDAECKKDQKHGLREWLRQIQNICYDAEDVFDGFDVQEKRKQVVEASGSTRVKVRHLFSSSNSLAFRFKMAHQIKKIKDRLDKVAADGVRFGLTNVDPGLVMQQREMTYPHIDASSVIGRQNEQDQIINLLMQPHPHGDGDGDKSLCVIPILKMWVCISDYFNIRKIIINIINSETTSTFTSSSAPSSGFAQLENINNLGIVQLVSRLTQKLSGQKFLLVLDDVWNDDRGKWLELKDLIKVGAPGSKIMVTTRSNSIALMMGDVLPYLVEKGLSPKDCLSLFVKWAFKEGEEKKNPNLVEIGKEIVKKCQGVPLAVRTLGSSLFSNFDINRLFRSYEICSLWVALGLVQSLNGGEMLESIARKYIDELHSRSFIQDVSDVGSFCYFKVHDLIHDLALYVSTEDFVAVDSHTRNIPQQVRHLSVVEDDSLDVNLIPKSRSVRSILFPISGLGLKSESLLNEWISRYKYLRYLDLTDSSFETMPNSIAKLKHLRVLDLSRNRKIRTLPNSICKLLQLQDLNLSGCTEFENLPKGLGKLISLCRLTVTTKQSVLTLDEFVTLIHLQDLSFHYCDNIKFLFRHQLPSIEEMYFESCGSLESLPLHIFPKLQTLHIRNCEKLNLLLNNESPIQTLRMKHLYLLGFPTLVTLPEWIVCAMNTLETLVINSIPNLKMLPVFLSTMTRLKRLYIVGCRQLLSLPSDMHRLTALEDFRIIACPELSRKCQRQSGEYWPMIAHIKSISIDEPTGEEA