Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85149.t1 | XP_003597693.1 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 9.70E-182 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85149.t1 | O04326 | 69.3 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 7.6e-127 | 454.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85149.t1 | G7IUM0 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 7.0e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene85149 | -0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene85149 | -0.84188 | 3.63E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene85149 | -0.881506 | 2.27E-70 | -1.69E-46 |
| MS.gene049435 | MS.gene85149 | -0.817657 | 2.94E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene85149 | -0.822004 | 2.99E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene85149 | -0.866237 | 3.30E-65 | -1.69E-46 |
| MS.gene050227 | MS.gene85149 | -0.879354 | 1.33E-69 | -1.69E-46 |
| MS.gene050228 | MS.gene85149 | -0.872811 | 2.39E-67 | -1.69E-46 |
| MS.gene050330 | MS.gene85149 | 0.832522 | 9.01E-56 | -1.69E-46 |
| MS.gene050442 | MS.gene85149 | -0.867106 | 1.75E-65 | -1.69E-46 |
| MS.gene050623 | MS.gene85149 | 0.836122 | 1.13E-56 | -1.69E-46 |
| MS.gene050680 | MS.gene85149 | -0.831161 | 1.95E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene85149 | -0.823781 | 1.15E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene85149 | -0.822425 | 2.38E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene85149 | -0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene85149 | -0.838125 | 3.46E-57 | -1.69E-46 |
| MS.gene050762 | MS.gene85149 | -0.819258 | 1.28E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene85149 | -0.820893 | 5.39E-53 | -1.69E-46 |
| MS.gene050780 | MS.gene85149 | -0.811726 | 6.06E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene85149 | -0.884699 | 1.53E-71 | -1.69E-46 |
| MS.gene050820 | MS.gene85149 | -0.844085 | 9.40E-59 | -1.69E-46 |
| MS.gene050824 | MS.gene85149 | -0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene050826 | MS.gene85149 | -0.838791 | 2.33E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene85149 | -0.829163 | 6.00E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene85149 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene85149 | -0.831223 | 1.89E-55 | -1.69E-46 |
| MS.gene051265 | MS.gene85149 | -0.821185 | 4.62E-53 | -1.69E-46 |
| MS.gene051568 | MS.gene85149 | -0.842671 | 2.24E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene85149 | -0.83076 | 2.45E-55 | -1.69E-46 |
| MS.gene051924 | MS.gene85149 | 0.822247 | 2.62E-53 | -1.69E-46 |
| MS.gene051926 | MS.gene85149 | 0.805001 | 1.65E-49 | -1.69E-46 |
| MS.gene051935 | MS.gene85149 | -0.832992 | 6.89E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene85149 | -0.810533 | 1.10E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene85149 | 0.818471 | 1.93E-52 | -1.69E-46 |
| MS.gene052042 | MS.gene85149 | -0.82098 | 5.15E-53 | -1.69E-46 |
| MS.gene052056 | MS.gene85149 | 0.830609 | 2.67E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene85149 | -0.839539 | 1.49E-57 | -1.69E-46 |
| MS.gene052190 | MS.gene85149 | -0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene052323 | MS.gene85149 | -0.804058 | 2.59E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene85149 | -0.855916 | 4.58E-62 | -1.69E-46 |
| MS.gene052358 | MS.gene85149 | 0.826113 | 3.24E-54 | -1.69E-46 |
| MS.gene052361 | MS.gene85149 | 0.815034 | 1.14E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene85149 | -0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene052389 | MS.gene85149 | -0.857436 | 1.63E-62 | -1.69E-46 |
| MS.gene052586 | MS.gene85149 | -0.807432 | 5.07E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene85149 | 0.813857 | 2.07E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene85149 | -0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene053054 | MS.gene85149 | 0.839989 | 1.14E-57 | -1.69E-46 |
| MS.gene053147 | MS.gene85149 | -0.847932 | 8.46E-60 | -1.69E-46 |
| MS.gene053166 | MS.gene85149 | -0.829407 | 5.24E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene85149 | -0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene85149 | -0.828299 | 9.71E-55 | -1.69E-46 |
| MS.gene053584 | MS.gene85149 | -0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene053811 | MS.gene85149 | -0.836424 | 9.43E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene85149 | -0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene85149 | -0.823048 | 1.71E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene85149 | -0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene05417 | MS.gene85149 | -0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene85149 | -0.835024 | 2.13E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene85149 | -0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene85149 | 0.890362 | 1.06E-73 | -1.69E-46 |
| MS.gene054379 | MS.gene85149 | -0.83587 | 1.30E-56 | -1.69E-46 |
| MS.gene054405 | MS.gene85149 | -0.819937 | 8.94E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene85149 | -0.880608 | 4.77E-70 | -1.69E-46 |
| MS.gene054468 | MS.gene85149 | -0.914651 | 1.49E-84 | -1.69E-46 |
| MS.gene054472 | MS.gene85149 | -0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene85149 | -0.821247 | 4.47E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene85149 | -0.814757 | 1.31E-51 | -1.69E-46 |
| MS.gene054581 | MS.gene85149 | -0.83984 | 1.25E-57 | -1.69E-46 |
| MS.gene05468 | MS.gene85149 | -0.818426 | 1.97E-52 | -1.69E-46 |
| MS.gene054826 | MS.gene85149 | -0.85348 | 2.32E-61 | -1.69E-46 |
| MS.gene054930 | MS.gene85149 | -0.854021 | 1.62E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene85149 | -0.800292 | 1.54E-48 | -1.69E-46 |
| MS.gene055227 | MS.gene85149 | -0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene85149 | -0.8448 | 6.04E-59 | -1.69E-46 |
| MS.gene055357 | MS.gene85149 | -0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene85149 | -0.849005 | 4.27E-60 | -1.69E-46 |
| MS.gene055701 | MS.gene85149 | -0.861016 | 1.38E-63 | -1.69E-46 |
| MS.gene055818 | MS.gene85149 | -0.838332 | 3.06E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene85149 | -0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene05595 | MS.gene85149 | -0.843311 | 1.51E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene85149 | -0.817017 | 4.10E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene85149 | -0.844792 | 6.07E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene85149 | -0.811926 | 5.48E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene85149 | -0.81565 | 8.29E-52 | -1.69E-46 |
| MS.gene056873 | MS.gene85149 | -0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene85149 | -0.812148 | 4.91E-51 | -1.69E-46 |
| MS.gene057012 | MS.gene85149 | -0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene85149 | -0.84513 | 4.92E-59 | -1.69E-46 |
| MS.gene057156 | MS.gene85149 | 0.810186 | 1.31E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene85149 | -0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene057200 | MS.gene85149 | -0.808562 | 2.91E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene85149 | -0.85306 | 3.07E-61 | -1.69E-46 |
| MS.gene05761 | MS.gene85149 | -0.852521 | 4.37E-61 | -1.69E-46 |
| MS.gene058139 | MS.gene85149 | -0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene85149 | -0.806428 | 8.26E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene85149 | -0.82279 | 1.96E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene85149 | -0.80097 | 1.12E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene85149 | -0.813647 | 2.30E-51 | -1.69E-46 |
| MS.gene05872 | MS.gene85149 | -0.821011 | 5.06E-53 | -1.69E-46 |
| MS.gene058739 | MS.gene85149 | -0.824186 | 9.25E-54 | -1.69E-46 |
| MS.gene058935 | MS.gene85149 | -0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene85149 | -0.820859 | 5.49E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene85149 | -0.825392 | 4.81E-54 | -1.69E-46 |
| MS.gene059609 | MS.gene85149 | -0.831556 | 1.56E-55 | -1.69E-46 |
| MS.gene059664 | MS.gene85149 | -0.834234 | 3.37E-56 | -1.69E-46 |
| MS.gene059789 | MS.gene85149 | -0.808015 | 3.81E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene85149 | -0.805057 | 1.60E-49 | -1.69E-46 |
| MS.gene060122 | MS.gene85149 | 0.81389 | 2.04E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene85149 | 0.861112 | 1.29E-63 | -1.69E-46 |
| MS.gene060322 | MS.gene85149 | -0.857816 | 1.26E-62 | -1.69E-46 |
| MS.gene060373 | MS.gene85149 | -0.821952 | 3.07E-53 | -1.69E-46 |
| MS.gene060404 | MS.gene85149 | -0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene85149 | -0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene85149 | -0.825705 | 4.05E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene85149 | -0.808292 | 3.33E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene85149 | 0.832226 | 1.07E-55 | -1.69E-46 |
| MS.gene060683 | MS.gene85149 | -0.843952 | 1.02E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene85149 | -0.845368 | 4.24E-59 | -1.69E-46 |
| MS.gene060802 | MS.gene85149 | -0.833852 | 4.20E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene85149 | -0.829855 | 4.08E-55 | -1.69E-46 |
| MS.gene060879 | MS.gene85149 | -0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene85149 | -0.823713 | 1.19E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene85149 | 0.854135 | 1.51E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene85149 | 0.851691 | 7.52E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85149.t1 | MTR_2g101270 | 97.879 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85149.t1 | AT3G16310 | 69.277 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 5.79e-166 | 465 |
Find 103 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCAAATGATACTAATT+TGG | 0.190381 | 2.4:-3445374 | MS.gene85149:CDS |
| GAAGAATGGGTAACAGTATA+TGG | 0.215069 | 2.4:-3447559 | MS.gene85149:CDS |
| ATTAATGGAGTCCTAATTAT+TGG | 0.241844 | 2.4:-3444955 | MS.gene85149:CDS |
| GGAGTCGAAAATTCTCTATT+TGG | 0.255914 | 2.4:+3447832 | None:intergenic |
| ACTTCAGGCCTTGCCACTTC+TGG | 0.276867 | 2.4:+3447619 | None:intergenic |
| AAAATTCTCTATTTGGAGTT+TGG | 0.279174 | 2.4:+3447839 | None:intergenic |
| TTTCCCCGGCGGGCATTAAC+AGG | 0.283319 | 2.4:+3448042 | None:intergenic |
| TGTTCACCACCACTCTTTGC+AGG | 0.284691 | 2.4:+3447715 | None:intergenic |
| AAGAATGGAATACAAATTAA+TGG | 0.309323 | 2.4:-3444970 | MS.gene85149:CDS |
| TTGCCATTCTGCAGATAATA+TGG | 0.320989 | 2.4:+3444805 | None:intergenic |
| AAAACCAAATTAGTATCATT+TGG | 0.323538 | 2.4:+3445370 | None:intergenic |
| AAGGAATTTCGCTGGACTTC+AGG | 0.331878 | 2.4:+3447604 | None:intergenic |
| TCCTTGATTGTTAAGCCTTT+CGG | 0.335228 | 2.4:+3444894 | None:intergenic |
| GCTTCGGACTTGCCTTTCGC+TGG | 0.345748 | 2.4:+3447811 | None:intergenic |
| AGGGTTTCACACCAATAATT+AGG | 0.353677 | 2.4:+3444944 | None:intergenic |
| TAATCCAGTATGCCTGATTC+TGG | 0.358857 | 2.4:+3447904 | None:intergenic |
| TTCTCCAGAATCAGGCATAC+TGG | 0.373999 | 2.4:-3447908 | MS.gene85149:CDS |
| TACTTCTGGGTGCCTGGCAG+TGG | 0.374416 | 2.4:+3444852 | None:intergenic |
| TCAAACTAAGCGAGCCTTGT+TGG | 0.381381 | 2.4:+3447752 | None:intergenic |
| GCGTGAAAACTTTGGTAATT+CGG | 0.395948 | 2.4:-3447977 | MS.gene85149:CDS |
| GGCCTTGCCACTTCTGGTGG+TGG | 0.396977 | 2.4:+3447625 | None:intergenic |
| AAGGCTCGCTTAGTTTGAAT+TGG | 0.399188 | 2.4:-3447747 | MS.gene85149:CDS |
| TGTGCTTACTTCTGGGTGCC+TGG | 0.400037 | 2.4:+3444846 | None:intergenic |
| CCTGGCAGTGGGTAGAGGTA+AGG | 0.403276 | 2.4:+3444864 | None:intergenic |
| AGCACATCTTATGCTTTAAG+AGG | 0.412178 | 2.4:-3447787 | MS.gene85149:CDS |
| GAAATCTTAATGAGGAAGAA+TGG | 0.412872 | 2.4:-3447573 | MS.gene85149:CDS |
| GCACATCAAAAGCTCCTTCT+CGG | 0.416892 | 2.4:-3444828 | MS.gene85149:CDS |
| CAGGAGCATCTTCTTCTCTA+TGG | 0.417616 | 2.4:-3447999 | MS.gene85149:CDS |
| GGGTGCCTGGCAGTGGGTAG+AGG | 0.423344 | 2.4:+3444859 | None:intergenic |
| CTGGCCCTAGAGATGCTAAC+TGG | 0.425172 | 2.4:-3445306 | MS.gene85149:CDS |
| TGCTCCTGACTGGCTTGGAC+TGG | 0.428965 | 2.4:+3448014 | None:intergenic |
| ACCGAAAGGCTTAACAATCA+AGG | 0.430735 | 2.4:-3444895 | MS.gene85149:CDS |
| ACTTAGTCTCAGGAGACATT+TGG | 0.432323 | 2.4:+3447881 | None:intergenic |
| AGCATAAGATGTGCTGGCTT+CGG | 0.432389 | 2.4:+3447795 | None:intergenic |
| TCTCTATGGCGTGAAAACTT+TGG | 0.434782 | 2.4:-3447985 | MS.gene85149:CDS |
| TTCTCTATTTGGAGTTTGGA+TGG | 0.437107 | 2.4:+3447843 | None:intergenic |
| CTTGCCACTTCTGGTGGTGG+AGG | 0.448887 | 2.4:+3447628 | None:intergenic |
| GGTCAAAGCTTGACGTTGCA+TGG | 0.453671 | 2.4:+3444915 | None:intergenic |
| GCTCGCTTAGTTTGAATTGG+TGG | 0.454126 | 2.4:-3447744 | MS.gene85149:CDS |
| CAAAATGCTCTCAACAAGAA+TGG | 0.460346 | 2.4:-3444985 | MS.gene85149:CDS |
| GTCGAGGGTGTGGTTCAGCC+TGG | 0.461947 | 2.4:-3447667 | MS.gene85149:CDS |
| GGCTGAACCACACCCTCGAC+TGG | 0.463862 | 2.4:+3447670 | None:intergenic |
| TTATTGTCTGACTTAGTCTC+AGG | 0.468844 | 2.4:+3447871 | None:intergenic |
| GTCCATGATCTTGGATGCTA+AGG | 0.469908 | 2.4:+3444735 | None:intergenic |
| ATCCTTAGCATCCAAGATCA+TGG | 0.475742 | 2.4:-3444737 | MS.gene85149:CDS |
| ATTAAGATTTCCTGCAGGTA+AGG | 0.475811 | 2.4:+3447585 | None:intergenic |
| GTGAACAAGAGGAGAAAGGA+AGG | 0.476290 | 2.4:-3447699 | MS.gene85149:CDS |
| AATTATTGGTGTGAAACCCT+TGG | 0.478180 | 2.4:-3444941 | MS.gene85149:CDS |
| ATCCCCTGTTAATGCCCGCC+GGG | 0.480958 | 2.4:-3448046 | MS.gene85149:CDS |
| AAATCTTAATGAGGAAGAAT+GGG | 0.484177 | 2.4:-3447572 | MS.gene85149:CDS |
| AAACATCAAGTCCATGATCT+TGG | 0.488113 | 2.4:+3444726 | None:intergenic |
| GAAGATGCTCCTGACTGGCT+TGG | 0.495482 | 2.4:+3448009 | None:intergenic |
| GGTGGTGAACAAGAGGAGAA+AGG | 0.505138 | 2.4:-3447703 | MS.gene85149:CDS |
| TCAGGCCTTGCCACTTCTGG+TGG | 0.505586 | 2.4:+3447622 | None:intergenic |
| ACTTCTGGGTGCCTGGCAGT+GGG | 0.506491 | 2.4:+3444853 | None:intergenic |
| CAGTTAGCATCTCTAGGGCC+AGG | 0.509660 | 2.4:+3445307 | None:intergenic |
| GCGCAAAGAACTCCTAGGTC+TGG | 0.511122 | 2.4:-3448099 | MS.gene85149:CDS |
| AAGAATGGGTAACAGTATAT+GGG | 0.512808 | 2.4:-3447558 | MS.gene85149:intron |
| TTGACGTTGCATGGGATCCA+AGG | 0.518509 | 2.4:+3444924 | None:intergenic |
| TCTTAAAGCATAAGATGTGC+TGG | 0.519255 | 2.4:+3447789 | None:intergenic |
| CTGCAGGTAAGGAATTTCGC+TGG | 0.519335 | 2.4:+3447596 | None:intergenic |
| CATCCCCTGTTAATGCCCGC+CGG | 0.522742 | 2.4:-3448047 | MS.gene85149:CDS |
| AATGCAACTGCAAGGCAGAC+TGG | 0.522955 | 2.4:-3444784 | MS.gene85149:CDS |
| GTCAAAGCTTGACGTTGCAT+GGG | 0.523353 | 2.4:+3444916 | None:intergenic |
| GAGAAGAAGATGCTCCTGAC+TGG | 0.526749 | 2.4:+3448004 | None:intergenic |
| CCTTACCTCTACCCACTGCC+AGG | 0.527907 | 2.4:-3444864 | MS.gene85149:CDS |
| TCTCTATTTGGAGTTTGGAT+GGG | 0.529308 | 2.4:+3447844 | None:intergenic |
| TCCTCATTAAGATTTCCTGC+AGG | 0.533575 | 2.4:+3447580 | None:intergenic |
| CAGCGAAATTCCTTACCTGC+AGG | 0.534512 | 2.4:-3447595 | MS.gene85149:CDS |
| AACGTCAAGCTTTGACCGAA+AGG | 0.536916 | 2.4:-3444909 | MS.gene85149:CDS |
| GGGTTCTCCAGTCGAGGGTG+TGG | 0.537698 | 2.4:-3447677 | MS.gene85149:CDS |
| CCACAGCGCAAAGAACTCCT+AGG | 0.538182 | 2.4:-3448104 | MS.gene85149:CDS |
| TGCAGATAATATGGCCGAGA+AGG | 0.543834 | 2.4:+3444814 | None:intergenic |
| ACTGGAAAACTTTCCCCGGC+GGG | 0.548506 | 2.4:+3448032 | None:intergenic |
| GCACATCTTATGCTTTAAGA+GGG | 0.552808 | 2.4:-3447786 | MS.gene85149:CDS |
| CGGCCATATTATCTGCAGAA+TGG | 0.555153 | 2.4:-3444808 | MS.gene85149:CDS |
| TCTTCCTCCACCACCAGAAG+TGG | 0.556002 | 2.4:-3447632 | MS.gene85149:CDS |
| CTGGCAGTGGGTAGAGGTAA+GGG | 0.559275 | 2.4:+3444865 | None:intergenic |
| TTGGACTGGAAAACTTTCCC+CGG | 0.559593 | 2.4:+3448028 | None:intergenic |
| TGCATCCAGTTAGCATCTCT+AGG | 0.560762 | 2.4:+3445301 | None:intergenic |
| TTCCCCGGCGGGCATTAACA+GGG | 0.567742 | 2.4:+3448043 | None:intergenic |
| TGACGTTGCATGGGATCCAA+GGG | 0.567770 | 2.4:+3444925 | None:intergenic |
| AAAGTCTGATCTATCTTCCA+AGG | 0.574341 | 2.4:+3447930 | None:intergenic |
| AGGAAGGGGTTCTCCAGTCG+AGG | 0.579447 | 2.4:-3447683 | MS.gene85149:CDS |
| ACCTGCAGGAAATCTTAATG+AGG | 0.582251 | 2.4:-3447581 | MS.gene85149:CDS |
| TCCCCGGCGGGCATTAACAG+GGG | 0.586228 | 2.4:+3448044 | None:intergenic |
| GAACAAGAGGAGAAAGGAAG+GGG | 0.588864 | 2.4:-3447697 | MS.gene85149:CDS |
| CTCCACCACCAGAAGTGGCA+AGG | 0.589454 | 2.4:-3447627 | MS.gene85149:CDS |
| TGAACAAGAGGAGAAAGGAA+GGG | 0.599791 | 2.4:-3447698 | MS.gene85149:CDS |
| GCATCCAGTTAGCATCTCTA+GGG | 0.606367 | 2.4:+3445302 | None:intergenic |
| AAAGAGTGGTGGTGAACAAG+AGG | 0.606401 | 2.4:-3447710 | MS.gene85149:CDS |
| CCTAGGAGTTCTTTGCGCTG+TGG | 0.609099 | 2.4:+3448104 | None:intergenic |
| GGAAGAGTAATCAATGCACC+AGG | 0.629675 | 2.4:+3447649 | None:intergenic |
| GACTGGAAAACTTTCCCCGG+CGG | 0.634463 | 2.4:+3448031 | None:intergenic |
| CACATCTTATGCTTTAAGAG+GGG | 0.638647 | 2.4:-3447785 | MS.gene85149:CDS |
| AGTGACTGTCTACCAGACCT+AGG | 0.639843 | 2.4:+3448087 | None:intergenic |
| AGAATGGCAATGCAACTGCA+AGG | 0.651500 | 2.4:-3444792 | MS.gene85149:CDS |
| TCCCCTGTTAATGCCCGCCG+GGG | 0.661914 | 2.4:-3448045 | MS.gene85149:CDS |
| GGAAGGGGTTCTCCAGTCGA+GGG | 0.662892 | 2.4:-3447682 | MS.gene85149:CDS |
| GGGGTGCAGCAAAACCAACA+AGG | 0.670858 | 2.4:-3447766 | MS.gene85149:CDS |
| TGGTCGTCACCTGCAAAGAG+TGG | 0.678630 | 2.4:-3447724 | MS.gene85149:CDS |
| TCGTCACCTGCAAAGAGTGG+TGG | 0.691867 | 2.4:-3447721 | MS.gene85149:CDS |
| GCAACTGCAAGGCAGACTGG+AGG | 0.718127 | 2.4:-3444781 | MS.gene85149:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTATACATTAAAAATAAA+AGG | + | chr2.4:3447075-3447094 | None:intergenic | 10.0% |
| !!! | AATTTTAAAAGAAAAAACAT+TGG | + | chr2.4:3447702-3447721 | None:intergenic | 10.0% |
| !! | AGAATTAAATCAAAACAAAA+TGG | + | chr2.4:3445688-3445707 | None:intergenic | 15.0% |
| !! | ATATTATTATCATCTTGAAT+GGG | - | chr2.4:3446903-3446922 | MS.gene85149:intron | 15.0% |
| !! | TATATTATTATCATCTTGAA+TGG | - | chr2.4:3446902-3446921 | MS.gene85149:intron | 15.0% |
| !!! | AACTTCTTTTTTTTATTTAG+TGG | + | chr2.4:3445474-3445493 | None:intergenic | 15.0% |
| !!! | AATTTTTCTTTATAAAGCAA+TGG | - | chr2.4:3447599-3447618 | MS.gene85149:CDS | 15.0% |
| !!! | ATTAAACATTTTAATCGTAA+GGG | - | chr2.4:3446545-3446564 | MS.gene85149:intron | 15.0% |
| !!! | TTTGTTTAAATAGACTTTTT+GGG | - | chr2.4:3446837-3446856 | MS.gene85149:intron | 15.0% |
| !!! | TTTTCAGTTTGTTTATTTTT+AGG | - | chr2.4:3446260-3446279 | MS.gene85149:intron | 15.0% |
| !!! | TTTTGTTTAAATAGACTTTT+TGG | - | chr2.4:3446836-3446855 | MS.gene85149:intron | 15.0% |
| !! | AAAACCAAATTAGTATCATT+TGG | + | chr2.4:3447461-3447480 | None:intergenic | 20.0% |
| !! | AAGAATGGAATACAAATTAA+TGG | - | chr2.4:3447858-3447877 | MS.gene85149:CDS | 20.0% |
| !! | ACATTGGAAATATTGATAAA+AGG | + | chr2.4:3447686-3447705 | None:intergenic | 20.0% |
| !! | ACGATTAAAATGTTTAATGT+TGG | + | chr2.4:3446543-3446562 | None:intergenic | 20.0% |
| !! | ATTGTTAATCCCTTATTATT+CGG | + | chr2.4:3446665-3446684 | None:intergenic | 20.0% |
| !! | TAATCATATATACTCTTGAA+TGG | + | chr2.4:3447384-3447403 | None:intergenic | 20.0% |
| !! | TCAAGAATAATTGTCTAAAA+GGG | - | chr2.4:3445860-3445879 | MS.gene85149:intron | 20.0% |
| !!! | AAAAATCTAAACCATTTTAG+CGG | + | chr2.4:3446809-3446828 | None:intergenic | 20.0% |
| !!! | AACTTGAAACTTTTAAACAT+AGG | + | chr2.4:3446337-3446356 | None:intergenic | 20.0% |
| !!! | AATTTGTATTTTGTAGGAAA+AGG | + | chr2.4:3446964-3446983 | None:intergenic | 20.0% |
| !!! | ATGATACTAATTTGGTTTTA+AGG | - | chr2.4:3447462-3447481 | MS.gene85149:intron | 20.0% |
| !!! | CATTAAACATTTTAATCGTA+AGG | - | chr2.4:3446544-3446563 | MS.gene85149:intron | 20.0% |
| !!! | CCACTTTAAAACTATTTATA+AGG | - | chr2.4:3445358-3445377 | MS.gene85149:CDS | 20.0% |
| !!! | CCTTATAAATAGTTTTAAAG+TGG | + | chr2.4:3445361-3445380 | None:intergenic | 20.0% |
| !!! | GATTTGTCAATTTTATAGAA+TGG | - | chr2.4:3446714-3446733 | MS.gene85149:intron | 20.0% |
| !!! | TATGTTTAAAAGTTTCAAGT+TGG | - | chr2.4:3446336-3446355 | MS.gene85149:intron | 20.0% |
| !!! | TGATACTAATTTGGTTTTAA+GGG | - | chr2.4:3447463-3447482 | MS.gene85149:intron | 20.0% |
| ! | AAATACCGCTTTATATTTGT+TGG | - | chr2.4:3447190-3447209 | MS.gene85149:intron | 25.0% |
| ! | AAATCTTAATGAGGAAGAAT+GGG | - | chr2.4:3445256-3445275 | MS.gene85149:intron | 25.0% |
| ! | AATACACATAGATTGTTAGT+TGG | + | chr2.4:3447038-3447057 | None:intergenic | 25.0% |
| ! | AGAGCATAAAGAAACATAAA+TGG | + | chr2.4:3446200-3446219 | None:intergenic | 25.0% |
| ! | AGTGATAATTCTCAAAACTT+TGG | + | chr2.4:3445776-3445795 | None:intergenic | 25.0% |
| ! | ATACACATAGATTGTTAGTT+GGG | + | chr2.4:3447037-3447056 | None:intergenic | 25.0% |
| ! | ATGTAATAGGTATATAGGTT+GGG | - | chr2.4:3445905-3445924 | MS.gene85149:intron | 25.0% |
| ! | ATTAATGGAGTCCTAATTAT+TGG | - | chr2.4:3447873-3447892 | MS.gene85149:CDS | 25.0% |
| ! | ATTGTAATGTTAGTAACGTT+CGG | + | chr2.4:3446364-3446383 | None:intergenic | 25.0% |
| ! | ATTTATGTTTCTTTATGCTC+TGG | - | chr2.4:3446199-3446218 | MS.gene85149:intron | 25.0% |
| ! | ATTTCATTCCATGATGTAAT+AGG | - | chr2.4:3445937-3445956 | MS.gene85149:intron | 25.0% |
| ! | CTCAAGAATAATTGTCTAAA+AGG | - | chr2.4:3445859-3445878 | MS.gene85149:intron | 25.0% |
| ! | CTGATATATTAAGAATTGAG+AGG | - | chr2.4:3445794-3445813 | MS.gene85149:intron | 25.0% |
| ! | GAAACCTAAAATAAACGTAA+GGG | + | chr2.4:3446304-3446323 | None:intergenic | 25.0% |
| ! | GTAAAATGTACCATATTTCT+AGG | + | chr2.4:3445390-3445409 | None:intergenic | 25.0% |
| ! | TCTACTTTAGCATTTACATT+TGG | - | chr2.4:3445305-3445324 | MS.gene85149:CDS | 25.0% |
| ! | TCTGAATTTCCGAATAATAA+GGG | - | chr2.4:3446653-3446672 | MS.gene85149:intron | 25.0% |
| ! | TGAAACCTAAAATAAACGTA+AGG | + | chr2.4:3446305-3446324 | None:intergenic | 25.0% |
| ! | TTCTCCAAATGATACTAATT+TGG | - | chr2.4:3447454-3447473 | MS.gene85149:intron | 25.0% |
| ! | TTCTGAATTTCCGAATAATA+AGG | - | chr2.4:3446652-3446671 | MS.gene85149:intron | 25.0% |
| ! | TTTATGTTTCTTTATGCTCT+GGG | - | chr2.4:3446200-3446219 | MS.gene85149:intron | 25.0% |
| !! | AAAATTCTCTATTTGGAGTT+TGG | + | chr2.4:3444992-3445011 | None:intergenic | 25.0% |
| !! | AATAATCAAGAGCATAATGA+GGG | - | chr2.4:3446078-3446097 | MS.gene85149:intron | 25.0% |
| !! | TTTAGGTTTAATTGCATGAT+TGG | - | chr2.4:3446277-3446296 | MS.gene85149:intron | 25.0% |
| !!! | ATTTTTAGAAGCATGTACAT+TGG | + | chr2.4:3447416-3447435 | None:intergenic | 25.0% |
| !!! | GTTTATTTTAGGTTTCAAGT+TGG | - | chr2.4:3446308-3446327 | MS.gene85149:intron | 25.0% |
| !!! | TAGACAAAACAAAAAGTACT+CGG | - | chr2.4:3446113-3446132 | MS.gene85149:intron | 25.0% |
| AAACCTAAAGTAAACGTTAG+GGG | - | chr2.4:3446577-3446596 | MS.gene85149:intron | 30.0% | |
| AAGAATGGGTAACAGTATAT+GGG | - | chr2.4:3445270-3445289 | MS.gene85149:intron | 30.0% | |
| AAGGATTTGTCCTAGAAATA+TGG | - | chr2.4:3445377-3445396 | MS.gene85149:CDS | 30.0% | |
| AATCATAGTATTCAAGCAAG+AGG | + | chr2.4:3447578-3447597 | None:intergenic | 30.0% | |
| AATGGAAAATAACACCCATT+AGG | + | chr2.4:3446182-3446201 | None:intergenic | 30.0% | |
| ACACTACTATCATTCCTTAT+CGG | + | chr2.4:3445335-3445354 | None:intergenic | 30.0% | |
| ACCTTCCAACAAATATAAAG+CGG | + | chr2.4:3447198-3447217 | None:intergenic | 30.0% | |
| AGAATAATTGTCTAAAAGGG+TGG | - | chr2.4:3445863-3445882 | MS.gene85149:intron | 30.0% | |
| AGAGTTAACTCAAAATTCGA+CGG | - | chr2.4:3446479-3446498 | MS.gene85149:intron | 30.0% | |
| ATAAGGCTAAATTGCATGTT+TGG | + | chr2.4:3446604-3446623 | None:intergenic | 30.0% | |
| ATAGATAATTGATTGTGCTG+AGG | - | chr2.4:3447328-3447347 | MS.gene85149:intron | 30.0% | |
| ATCTATGTGTATTGTTTCCA+AGG | - | chr2.4:3447045-3447064 | MS.gene85149:intron | 30.0% | |
| ATTAGGACATTATCTTAGAG+GGG | + | chr2.4:3446165-3446184 | None:intergenic | 30.0% | |
| ATTTCCATCCATGATGTAAT+AGG | - | chr2.4:3445892-3445911 | MS.gene85149:intron | 30.0% | |
| CATTAGGACATTATCTTAGA+GGG | + | chr2.4:3446166-3446185 | None:intergenic | 30.0% | |
| CCATGATGTAATAGGTATAT+AGG | - | chr2.4:3445900-3445919 | MS.gene85149:intron | 30.0% | |
| CCTATATACCTATTACATCA+TGG | + | chr2.4:3445903-3445922 | None:intergenic | 30.0% | |
| GAAACCTAAAGTAAACGTTA+GGG | - | chr2.4:3446576-3446595 | MS.gene85149:intron | 30.0% | |
| GAAATCTTAATGAGGAAGAA+TGG | - | chr2.4:3445255-3445274 | MS.gene85149:intron | 30.0% | |
| GAGGTAATCAGTTAGAATAT+TGG | - | chr2.4:3445813-3445832 | MS.gene85149:intron | 30.0% | |
| GATGTAATAGGTATATAGGT+TGG | - | chr2.4:3445904-3445923 | MS.gene85149:intron | 30.0% | |
| GCACTACTAAATACATTTCT+TGG | - | chr2.4:3447797-3447816 | MS.gene85149:CDS | 30.0% | |
| GCTCTTGAATATCTTTGATT+AGG | - | chr2.4:3447117-3447136 | MS.gene85149:intron | 30.0% | |
| GTAGCTGCAAAAAGTTTAAT+AGG | + | chr2.4:3447143-3447162 | None:intergenic | 30.0% | |
| GTTAGAATATTGGCAAAGTT+TGG | - | chr2.4:3445823-3445842 | MS.gene85149:intron | 30.0% | |
| TAAAAATAAAAGGTTGCCCT+TGG | + | chr2.4:3447065-3447084 | None:intergenic | 30.0% | |
| TAAGGGATTAACAATACCTA+TGG | - | chr2.4:3446670-3446689 | MS.gene85149:intron | 30.0% | |
| TAGATAATTGATTGTGCTGA+GGG | - | chr2.4:3447329-3447348 | MS.gene85149:intron | 30.0% | |
| TATACCTATTACATCATGGA+TGG | + | chr2.4:3445899-3445918 | None:intergenic | 30.0% | |
| TCATACACAATCACATATGT+TGG | - | chr2.4:3445630-3445649 | MS.gene85149:intron | 30.0% | |
| TCTATGTGTATTGTTTCCAA+GGG | - | chr2.4:3447046-3447065 | MS.gene85149:intron | 30.0% | |
| TGAAACCTAAAGTAAACGTT+AGG | - | chr2.4:3446575-3446594 | MS.gene85149:intron | 30.0% | |
| TTAAGGGAGTTTGAAAAATG+TGG | - | chr2.4:3447479-3447498 | MS.gene85149:intron | 30.0% | |
| TTGTAATGTTAGTAACGTTC+GGG | + | chr2.4:3446363-3446382 | None:intergenic | 30.0% | |
| ! | AAAACATTTGATTTCAGCAG+AGG | - | chr2.4:3445733-3445752 | MS.gene85149:intron | 30.0% |
| ! | AATCATTTTGTATCCGTTGA+TGG | + | chr2.4:3446990-3447009 | None:intergenic | 30.0% |
| ! | ATCATTTTGTATCCGTTGAT+GGG | + | chr2.4:3446989-3447008 | None:intergenic | 30.0% |
| ! | CAGTGTACTTGCTAAAAATA+AGG | + | chr2.4:3446621-3446640 | None:intergenic | 30.0% |
| ! | GAATAATCAAGAGCATAATG+AGG | - | chr2.4:3446077-3446096 | MS.gene85149:intron | 30.0% |
| ! | GTATAATCTTGTGAAGCTTT+TGG | - | chr2.4:3447087-3447106 | MS.gene85149:intron | 30.0% |
| ! | GTTTACTTTAGGTTTCAAAC+TGG | + | chr2.4:3446572-3446591 | None:intergenic | 30.0% |
| ! | TATTCACCACTTCTCTAAAA+AGG | + | chr2.4:3447225-3447244 | None:intergenic | 30.0% |
| ! | TGTCAATTTTATAGAATGGC+TGG | - | chr2.4:3446718-3446737 | MS.gene85149:intron | 30.0% |
| ! | TTACATTTGGTTTACCGATA+AGG | - | chr2.4:3445318-3445337 | MS.gene85149:CDS | 30.0% |
| !! | AGACAAAACAAAAAGTACTC+GGG | - | chr2.4:3446114-3446133 | MS.gene85149:intron | 30.0% |
| !! | CTCTAAGATAATGTCCTAAT+GGG | - | chr2.4:3446165-3446184 | MS.gene85149:intron | 30.0% |
| !! | TTTTGTTTAAAACGTCCACA+TGG | - | chr2.4:3446406-3446425 | MS.gene85149:intron | 30.0% |
| !!! | GAAATTTTGAAACATGTTCC+TGG | - | chr2.4:3447503-3447522 | MS.gene85149:intron | 30.0% |
| !!! | TAGACAGTCACTATTTTTTC+AGG | - | chr2.4:3444752-3444771 | MS.gene85149:CDS | 30.0% |
| AAAACCACTTCAGAGTAACA+AGG | + | chr2.4:3447739-3447758 | None:intergenic | 35.0% | |
| AAACATCAAGTCCATGATCT+TGG | + | chr2.4:3448105-3448124 | None:intergenic | 35.0% | |
| AAAGTCTGATCTATCTTCCA+AGG | + | chr2.4:3444901-3444920 | None:intergenic | 35.0% | |
| AATAAGTTGTGTTGTGCTAC+AGG | + | chr2.4:3445528-3445547 | None:intergenic | 35.0% | |
| AATACAAATTGCCCCATCAA+CGG | - | chr2.4:3446974-3446993 | MS.gene85149:intron | 35.0% | |
| AATGGTTTATTGAATCGGTG+AGG | + | chr2.4:3447358-3447377 | None:intergenic | 35.0% | |
| AATTATTGGTGTGAAACCCT+TGG | - | chr2.4:3447887-3447906 | MS.gene85149:CDS | 35.0% | |
| ACAATACCTATGGCTATGTA+TGG | - | chr2.4:3446680-3446699 | MS.gene85149:intron | 35.0% | |
| ACAATGTCAAAATAGCTGGA+TGG | + | chr2.4:3447654-3447673 | None:intergenic | 35.0% | |
| AGAATATTGGCAAAGTTTGG+TGG | - | chr2.4:3445826-3445845 | MS.gene85149:intron | 35.0% | |
| AGGGTTTCACACCAATAATT+AGG | + | chr2.4:3447887-3447906 | None:intergenic | 35.0% | |
| ATGCTGACATCAGTAACATA+AGG | - | chr2.4:3446515-3446534 | MS.gene85149:intron | 35.0% | |
| ATTAAGATTTCCTGCAGGTA+AGG | + | chr2.4:3445246-3445265 | None:intergenic | 35.0% | |
| ATTGTCTAAAAGGGTGGTAA+TGG | - | chr2.4:3445869-3445888 | MS.gene85149:intron | 35.0% | |
| CAAAATGCTCTCAACAAGAA+TGG | - | chr2.4:3447843-3447862 | MS.gene85149:CDS | 35.0% | |
| CCATTAGGACATTATCTTAG+AGG | + | chr2.4:3446167-3446186 | None:intergenic | 35.0% | |
| CTATCTTCCAAGGTGAAAAA+AGG | + | chr2.4:3444891-3444910 | None:intergenic | 35.0% | |
| GAAGAATGGGTAACAGTATA+TGG | - | chr2.4:3445269-3445288 | MS.gene85149:intron | 35.0% | |
| GACAACAATGTCAAAATAGC+TGG | + | chr2.4:3447658-3447677 | None:intergenic | 35.0% | |
| GCAAAAATCATAGCTAGTTC+CGG | - | chr2.4:3446773-3446792 | MS.gene85149:intron | 35.0% | |
| GGAGTCGAAAATTCTCTATT+TGG | + | chr2.4:3444999-3445018 | None:intergenic | 35.0% | |
| GGCCAAATGGTTTATTGAAT+CGG | + | chr2.4:3447363-3447382 | None:intergenic | 35.0% | |
| GTTAGTTGGGCAAGAAAAAT+GGG | + | chr2.4:3447024-3447043 | None:intergenic | 35.0% | |
| TAACTCAAAATTCGACGGAA+AGG | - | chr2.4:3446484-3446503 | MS.gene85149:intron | 35.0% | |
| TAGTGCATAGCCTAATATCA+GGG | + | chr2.4:3447783-3447802 | None:intergenic | 35.0% | |
| TATACTCTTGAATGGCCAAA+TGG | + | chr2.4:3447376-3447395 | None:intergenic | 35.0% | |
| TCATAGTCGTCTTTACAATC+TGG | + | chr2.4:3445551-3445570 | None:intergenic | 35.0% | |
| TCCTTGATTGTTAAGCCTTT+CGG | + | chr2.4:3447937-3447956 | None:intergenic | 35.0% | |
| TCTTAAAGCATAAGATGTGC+TGG | + | chr2.4:3445042-3445061 | None:intergenic | 35.0% | |
| TGCTGACATCAGTAACATAA+GGG | - | chr2.4:3446516-3446535 | MS.gene85149:intron | 35.0% | |
| TGTTAGTTGGGCAAGAAAAA+TGG | + | chr2.4:3447025-3447044 | None:intergenic | 35.0% | |
| TTATTGTCTGACTTAGTCTC+AGG | + | chr2.4:3444960-3444979 | None:intergenic | 35.0% | |
| TTGCCATTCTGCAGATAATA+TGG | + | chr2.4:3448026-3448045 | None:intergenic | 35.0% | |
| TTGTTAACCACCCTGATATT+AGG | - | chr2.4:3447770-3447789 | MS.gene85149:CDS | 35.0% | |
| ! | ACCGCTTTATATTTGTTGGA+AGG | - | chr2.4:3447194-3447213 | MS.gene85149:intron | 35.0% |
| ! | AGCACATCTTATGCTTTAAG+AGG | - | chr2.4:3445041-3445060 | MS.gene85149:intron | 35.0% |
| ! | CTTTTGATGTGCTTACTTCT+GGG | + | chr2.4:3447992-3448011 | None:intergenic | 35.0% |
| ! | GCGTGAAAACTTTGGTAATT+CGG | - | chr2.4:3444851-3444870 | MS.gene85149:CDS | 35.0% |
| ! | GCTAAAATCATATTTGCTGC+AGG | - | chr2.4:3446004-3446023 | MS.gene85149:intron | 35.0% |
| ! | TAATAGGTATATAGGTTGGG+TGG | - | chr2.4:3445908-3445927 | MS.gene85149:intron | 35.0% |
| ! | TCATTTTGTATCCGTTGATG+GGG | + | chr2.4:3446988-3447007 | None:intergenic | 35.0% |
| ! | TCTCTATTTGGAGTTTGGAT+GGG | + | chr2.4:3444987-3445006 | None:intergenic | 35.0% |
| ! | TGGATGCTAAGGATTTTGTT+GGG | + | chr2.4:3448085-3448104 | None:intergenic | 35.0% |
| ! | TGGGGCAATTTGTATTTTGT+AGG | + | chr2.4:3446970-3446989 | None:intergenic | 35.0% |
| ! | TTCTCTATTTGGAGTTTGGA+TGG | + | chr2.4:3444988-3445007 | None:intergenic | 35.0% |
| ! | TTGGATGCTAAGGATTTTGT+TGG | + | chr2.4:3448086-3448105 | None:intergenic | 35.0% |
| !! | CACATCTTATGCTTTAAGAG+GGG | - | chr2.4:3445043-3445062 | MS.gene85149:intron | 35.0% |
| !! | CACCGATTCAATAAACCATT+TGG | - | chr2.4:3447358-3447377 | MS.gene85149:intron | 35.0% |
| !! | CCTCTAAGATAATGTCCTAA+TGG | - | chr2.4:3446164-3446183 | MS.gene85149:intron | 35.0% |
| !! | GACAAAACAAAAAGTACTCG+GGG | - | chr2.4:3446115-3446134 | MS.gene85149:intron | 35.0% |
| !! | GCACATCTTATGCTTTAAGA+GGG | - | chr2.4:3445042-3445061 | MS.gene85149:intron | 35.0% |
| !! | TGGTCCCTTACGTTTATTTT+AGG | - | chr2.4:3446297-3446316 | MS.gene85149:intron | 35.0% |
| AATTCCTGGTTTAGTGCAGT+AGG | - | chr2.4:3446226-3446245 | MS.gene85149:intron | 40.0% | |
| ACACAATCACATATGTTGGC+AGG | - | chr2.4:3445634-3445653 | MS.gene85149:intron | 40.0% | |
| ACCAATCCATACATAGCCAT+AGG | + | chr2.4:3446689-3446708 | None:intergenic | 40.0% | |
| ACCGAAAGGCTTAACAATCA+AGG | - | chr2.4:3447933-3447952 | MS.gene85149:CDS | 40.0% | |
| ACCTATGGCTATGTATGGAT+TGG | - | chr2.4:3446685-3446704 | MS.gene85149:intron | 40.0% | |
| ACCTGCAGGAAATCTTAATG+AGG | - | chr2.4:3445247-3445266 | MS.gene85149:intron | 40.0% | |
| ACTTAGTCTCAGGAGACATT+TGG | + | chr2.4:3444950-3444969 | None:intergenic | 40.0% | |
| ATCCTTAGCATCCAAGATCA+TGG | - | chr2.4:3448091-3448110 | MS.gene85149:CDS | 40.0% | |
| CACAATCACATATGTTGGCA+GGG | - | chr2.4:3445635-3445654 | MS.gene85149:intron | 40.0% | |
| GGACACACAGATAACTTTGT+GGG | - | chr2.4:3446435-3446454 | MS.gene85149:intron | 40.0% | |
| GTAGTGCATAGCCTAATATC+AGG | + | chr2.4:3447784-3447803 | None:intergenic | 40.0% | |
| TAAAACGTCCACATGGCTAA+CGG | - | chr2.4:3446413-3446432 | MS.gene85149:intron | 40.0% | |
| TAACTTCCGCTCTGCAAAAA+AGG | + | chr2.4:3446141-3446160 | None:intergenic | 40.0% | |
| TAATCCAGTATGCCTGATTC+TGG | + | chr2.4:3444927-3444946 | None:intergenic | 40.0% | |
| TCCTCATTAAGATTTCCTGC+AGG | + | chr2.4:3445251-3445270 | None:intergenic | 40.0% | |
| TCTCTATGGCGTGAAAACTT+TGG | - | chr2.4:3444843-3444862 | MS.gene85149:CDS | 40.0% | |
| TCTTCCAAGGTGAAAAAAGG+AGG | + | chr2.4:3444888-3444907 | None:intergenic | 40.0% | |
| TGAACAAGAGGAGAAAGGAA+GGG | - | chr2.4:3445130-3445149 | MS.gene85149:intron | 40.0% | |
| TGTCAAAATAGCTGGATGGA+TGG | + | chr2.4:3447650-3447669 | None:intergenic | 40.0% | |
| TGTTGTGCTACAGGAAACAT+GGG | + | chr2.4:3445519-3445538 | None:intergenic | 40.0% | |
| ! | AAGGCTCGCTTAGTTTGAAT+TGG | - | chr2.4:3445081-3445100 | MS.gene85149:intron | 40.0% |
| ! | ACTTTTTGCAGCTACGTTTG+AGG | - | chr2.4:3447148-3447167 | MS.gene85149:intron | 40.0% |
| ! | CTGGATGCACATTTTGTATC+AGG | - | chr2.4:3447541-3447560 | MS.gene85149:intron | 40.0% |
| ! | GCTTTTGATGTGCTTACTTC+TGG | + | chr2.4:3447993-3448012 | None:intergenic | 40.0% |
| ! | GGATGCTAAGGATTTTGTTG+GGG | + | chr2.4:3448084-3448103 | None:intergenic | 40.0% |
| ! | GTATATAGGTTGGGTGGTAA+TGG | - | chr2.4:3445914-3445933 | MS.gene85149:intron | 40.0% |
| ! | TCACCACTTCTCTAAAAAGG+AGG | + | chr2.4:3447222-3447241 | None:intergenic | 40.0% |
| ! | TCAGACTTTTCTCCAGAATC+AGG | - | chr2.4:3444912-3444931 | MS.gene85149:CDS | 40.0% |
| ! | TTTTCCTACTGCACTAAACC+AGG | + | chr2.4:3446233-3446252 | None:intergenic | 40.0% |
| !! | GTACCTCCTTTTTAGAGAAG+TGG | - | chr2.4:3447216-3447235 | MS.gene85149:intron | 40.0% |
| !! | TTGGATTGGCACACAAGATA+CGG | + | chr2.4:3447625-3447644 | None:intergenic | 40.0% |
| AAAACGTCCACATGGCTAAC+GGG | - | chr2.4:3446414-3446433 | MS.gene85149:intron | 45.0% | |
| AACTGCAGTGAAGACTGTAG+CGG | - | chr2.4:3446741-3446760 | MS.gene85149:intron | 45.0% | |
| AAGGAATTTCGCTGGACTTC+AGG | + | chr2.4:3445227-3445246 | None:intergenic | 45.0% | |
| AATAGCTGGATGGATGGTCT+TGG | + | chr2.4:3447644-3447663 | None:intergenic | 45.0% | |
| AGAATGGCAATGCAACTGCA+AGG | - | chr2.4:3448036-3448055 | MS.gene85149:CDS | 45.0% | |
| AGACCACAACGTGGATAGTA+TGG | - | chr2.4:3445979-3445998 | MS.gene85149:intron | 45.0% | |
| CACTTCAGAGTAACAAGGCA+TGG | + | chr2.4:3447734-3447753 | None:intergenic | 45.0% | |
| CGGCCATATTATCTGCAGAA+TGG | - | chr2.4:3448020-3448039 | MS.gene85149:CDS | 45.0% | |
| GAACAAGAGGAGAAAGGAAG+GGG | - | chr2.4:3445131-3445150 | MS.gene85149:intron | 45.0% | |
| GCACATCAAAAGCTCCTTCT+CGG | - | chr2.4:3448000-3448019 | MS.gene85149:CDS | 45.0% | |
| GCATCCAGTTAGCATCTCTA+GGG | + | chr2.4:3447529-3447548 | None:intergenic | 45.0% | |
| GGAAGAGTAATCAATGCACC+AGG | + | chr2.4:3445182-3445201 | None:intergenic | 45.0% | |
| GGGACACACAGATAACTTTG+TGG | - | chr2.4:3446434-3446453 | MS.gene85149:intron | 45.0% | |
| GGTCCCCTAACGTTTACTTT+AGG | + | chr2.4:3446583-3446602 | None:intergenic | 45.0% | |
| GTCAAAGCTTGACGTTGCAT+GGG | + | chr2.4:3447915-3447934 | None:intergenic | 45.0% | |
| GTCCATGATCTTGGATGCTA+AGG | + | chr2.4:3448096-3448115 | None:intergenic | 45.0% | |
| GTGAACAAGAGGAGAAAGGA+AGG | - | chr2.4:3445129-3445148 | MS.gene85149:intron | 45.0% | |
| GTGTTGTGCTACAGGAAACA+TGG | + | chr2.4:3445520-3445539 | None:intergenic | 45.0% | |
| TCCAAGGTGAAAAAAGGAGG+CGG | + | chr2.4:3444885-3444904 | None:intergenic | 45.0% | |
| TGCAGATAATATGGCCGAGA+AGG | + | chr2.4:3448017-3448036 | None:intergenic | 45.0% | |
| TGCATAGCCTAATATCAGGG+TGG | + | chr2.4:3447780-3447799 | None:intergenic | 45.0% | |
| TGCATCCAGTTAGCATCTCT+AGG | + | chr2.4:3447530-3447549 | None:intergenic | 45.0% | |
| TTCTCCAGAATCAGGCATAC+TGG | - | chr2.4:3444920-3444939 | MS.gene85149:CDS | 45.0% | |
| TTGCTGCAGGAATTCCCATA+TGG | - | chr2.4:3446017-3446036 | MS.gene85149:intron | 45.0% | |
| ! | AAAGAGTGGTGGTGAACAAG+AGG | - | chr2.4:3445118-3445137 | MS.gene85149:intron | 45.0% |
| ! | AACGTCAAGCTTTGACCGAA+AGG | - | chr2.4:3447919-3447938 | MS.gene85149:CDS | 45.0% |
| ! | CAAGAGCATAATGAGGGACA+GGG | - | chr2.4:3446084-3446103 | MS.gene85149:intron | 45.0% |
| ! | CATGCCTTGTTACTCTGAAG+TGG | - | chr2.4:3447732-3447751 | MS.gene85149:CDS | 45.0% |
| ! | GAATTTTCGACTCCAGCGAA+AGG | - | chr2.4:3445005-3445024 | MS.gene85149:intron | 45.0% |
| ! | GCTCGCTTAGTTTGAATTGG+TGG | - | chr2.4:3445084-3445103 | MS.gene85149:intron | 45.0% |
| ! | GGATTTTGTTGGGGAAGCAA+TGG | + | chr2.4:3448075-3448094 | None:intergenic | 45.0% |
| ! | TATGCTCTGGGTTGAATTCC+TGG | - | chr2.4:3446212-3446231 | MS.gene85149:intron | 45.0% |
| ! | TCAAACTAAGCGAGCCTTGT+TGG | + | chr2.4:3445079-3445098 | None:intergenic | 45.0% |
| ! | TCAAGAGCATAATGAGGGAC+AGG | - | chr2.4:3446083-3446102 | MS.gene85149:intron | 45.0% |
| ! | TTGGACTGGAAAACTTTCCC+CGG | + | chr2.4:3444803-3444822 | None:intergenic | 45.0% |
| !! | ACCATTTTAGCGGACATTCG+TGG | + | chr2.4:3446799-3446818 | None:intergenic | 45.0% |
| !! | AGCATAAGATGTGCTGGCTT+CGG | + | chr2.4:3445036-3445055 | None:intergenic | 45.0% |
| !! | CAGGAGCATCTTCTTCTCTA+TGG | - | chr2.4:3444829-3444848 | MS.gene85149:CDS | 45.0% |
| AAGGTGAAAAAAGGAGGCGG+AGG | + | chr2.4:3444882-3444901 | None:intergenic | 50.0% | |
| AATGCAACTGCAAGGCAGAC+TGG | - | chr2.4:3448044-3448063 | MS.gene85149:CDS | 50.0% | |
| AGTGACTGTCTACCAGACCT+AGG | + | chr2.4:3444744-3444763 | None:intergenic | 50.0% | |
| CAGCGAAATTCCTTACCTGC+AGG | - | chr2.4:3445233-3445252 | MS.gene85149:intron | 50.0% | |
| CCACAACGTGGATAGTATGG+TGG | - | chr2.4:3445982-3446001 | MS.gene85149:intron | 50.0% | |
| CCACCATACTATCCACGTTG+TGG | + | chr2.4:3445985-3446004 | None:intergenic | 50.0% | |
| CTCACTCCTACCTGCCATAT+GGG | + | chr2.4:3446034-3446053 | None:intergenic | 50.0% | |
| CTGCAGGTAAGGAATTTCGC+TGG | + | chr2.4:3445235-3445254 | None:intergenic | 50.0% | |
| GAGAAGAAGATGCTCCTGAC+TGG | + | chr2.4:3444827-3444846 | None:intergenic | 50.0% | |
| GCCACGAATGTCCGCTAAAA+TGG | - | chr2.4:3446795-3446814 | MS.gene85149:intron | 50.0% | |
| GGAATTCCCATATGGCAGGT+AGG | - | chr2.4:3446025-3446044 | MS.gene85149:intron | 50.0% | |
| GGTCAAAGCTTGACGTTGCA+TGG | + | chr2.4:3447916-3447935 | None:intergenic | 50.0% | |
| GGTGGTGAACAAGAGGAGAA+AGG | - | chr2.4:3445125-3445144 | MS.gene85149:intron | 50.0% | |
| GTAGATGTCAGACCACAACG+TGG | - | chr2.4:3445970-3445989 | MS.gene85149:intron | 50.0% | |
| TGAAAAAAGGAGGCGGAGGA+AGG | + | chr2.4:3444878-3444897 | None:intergenic | 50.0% | |
| TGACGTTGCATGGGATCCAA+GGG | + | chr2.4:3447906-3447925 | None:intergenic | 50.0% | |
| TGCAGGAATTCCCATATGGC+AGG | - | chr2.4:3446021-3446040 | MS.gene85149:intron | 50.0% | |
| TGTTCACCACCACTCTTTGC+AGG | + | chr2.4:3445116-3445135 | None:intergenic | 50.0% | |
| TTGACGTTGCATGGGATCCA+AGG | + | chr2.4:3447907-3447926 | None:intergenic | 50.0% | |
| ! | ATAACTTTGTGGGTGCCACG+TGG | - | chr2.4:3446445-3446464 | MS.gene85149:intron | 50.0% |
| ! | CTCTGTCTGAAACAACCACG+TGG | + | chr2.4:3446463-3446482 | None:intergenic | 50.0% |
| ! | CTGGATGGATGGTCTTGGAT+TGG | + | chr2.4:3447639-3447658 | None:intergenic | 50.0% |
| ! | TTTTCCAGTCCAAGCCAGTC+AGG | - | chr2.4:3444810-3444829 | MS.gene85149:CDS | 50.0% |
| !! | TTTTAGCGGACATTCGTGGC+CGG | + | chr2.4:3446795-3446814 | None:intergenic | 50.0% |
| !!! | TCCGCCTCCTTTTTTCACCT+TGG | - | chr2.4:3444881-3444900 | MS.gene85149:CDS | 50.0% |
| ACTGGAAAACTTTCCCCGGC+GGG | + | chr2.4:3444799-3444818 | None:intergenic | 55.0% | |
| CCACAGCGCAAAGAACTCCT+AGG | - | chr2.4:3444724-3444743 | MS.gene85149:CDS | 55.0% | |
| CCATATGGCAGGTAGGAGTG+AGG | - | chr2.4:3446032-3446051 | MS.gene85149:intron | 55.0% | |
| CCTAGGAGTTCTTTGCGCTG+TGG | + | chr2.4:3444727-3444746 | None:intergenic | 55.0% | |
| CCTCACTCCTACCTGCCATA+TGG | + | chr2.4:3446035-3446054 | None:intergenic | 55.0% | |
| CTGGCAGTGGGTAGAGGTAA+GGG | + | chr2.4:3447966-3447985 | None:intergenic | 55.0% | |
| CTGGCCCTAGAGATGCTAAC+TGG | - | chr2.4:3447522-3447541 | MS.gene85149:intron | 55.0% | |
| GACTGGAAAACTTTCCCCGG+CGG | + | chr2.4:3444800-3444819 | None:intergenic | 55.0% | |
| GCATAATGAGGGACAGGGTG+AGG | - | chr2.4:3446089-3446108 | MS.gene85149:intron | 55.0% | |
| GCGCAAAGAACTCCTAGGTC+TGG | - | chr2.4:3444729-3444748 | MS.gene85149:CDS | 55.0% | |
| GGGGTGCAGCAAAACCAACA+AGG | - | chr2.4:3445062-3445081 | MS.gene85149:intron | 55.0% | |
| TCGTCACCTGCAAAGAGTGG+TGG | - | chr2.4:3445107-3445126 | MS.gene85149:intron | 55.0% | |
| TCTTCCTCCACCACCAGAAG+TGG | - | chr2.4:3445196-3445215 | MS.gene85149:intron | 55.0% | |
| TGGTCGTCACCTGCAAAGAG+TGG | - | chr2.4:3445104-3445123 | MS.gene85149:intron | 55.0% | |
| TGTGCTTACTTCTGGGTGCC+TGG | + | chr2.4:3447985-3448004 | None:intergenic | 55.0% | |
| TGTGTGTCCCGTTAGCCATG+TGG | + | chr2.4:3446424-3446443 | None:intergenic | 55.0% | |
| ! | ACTTCAGGCCTTGCCACTTC+TGG | + | chr2.4:3445212-3445231 | None:intergenic | 55.0% |
| ! | GAAGATGCTCCTGACTGGCT+TGG | + | chr2.4:3444822-3444841 | None:intergenic | 55.0% |
| !! | CAGTTAGCATCTCTAGGGCC+AGG | + | chr2.4:3447524-3447543 | None:intergenic | 55.0% |
| !!! | TCGGGGCCTTTTTTGCAGAG+CGG | - | chr2.4:3446132-3446151 | MS.gene85149:intron | 55.0% |
| ACTTCTGGGTGCCTGGCAGT+GGG | + | chr2.4:3447978-3447997 | None:intergenic | 60.0% | |
| AGGAAGGGGTTCTCCAGTCG+AGG | - | chr2.4:3445145-3445164 | MS.gene85149:intron | 60.0% | |
| ATCCCCTGTTAATGCCCGCC+GGG | - | chr2.4:3444782-3444801 | MS.gene85149:CDS | 60.0% | |
| CATCCCCTGTTAATGCCCGC+CGG | - | chr2.4:3444781-3444800 | MS.gene85149:CDS | 60.0% | |
| CCTGGCAGTGGGTAGAGGTA+AGG | + | chr2.4:3447967-3447986 | None:intergenic | 60.0% | |
| CCTTACCTCTACCCACTGCC+AGG | - | chr2.4:3447964-3447983 | MS.gene85149:CDS | 60.0% | |
| CTCCACCACCAGAAGTGGCA+AGG | - | chr2.4:3445201-3445220 | MS.gene85149:intron | 60.0% | |
| GCAACTGCAAGGCAGACTGG+AGG | - | chr2.4:3448047-3448066 | MS.gene85149:CDS | 60.0% | |
| GCTTCGGACTTGCCTTTCGC+TGG | + | chr2.4:3445020-3445039 | None:intergenic | 60.0% | |
| GGAAGGGGTTCTCCAGTCGA+GGG | - | chr2.4:3445146-3445165 | MS.gene85149:intron | 60.0% | |
| TACTTCTGGGTGCCTGGCAG+TGG | + | chr2.4:3447979-3447998 | None:intergenic | 60.0% | |
| TTCCCCGGCGGGCATTAACA+GGG | + | chr2.4:3444788-3444807 | None:intergenic | 60.0% | |
| TTTCCCCGGCGGGCATTAAC+AGG | + | chr2.4:3444789-3444808 | None:intergenic | 60.0% | |
| ! | TCAGGCCTTGCCACTTCTGG+TGG | + | chr2.4:3445209-3445228 | None:intergenic | 60.0% |
| !! | CTTGCCACTTCTGGTGGTGG+AGG | + | chr2.4:3445203-3445222 | None:intergenic | 60.0% |
| !! | TGCTCCTGACTGGCTTGGAC+TGG | + | chr2.4:3444817-3444836 | None:intergenic | 60.0% |
| GGCTGAACCACACCCTCGAC+TGG | + | chr2.4:3445161-3445180 | None:intergenic | 65.0% | |
| GGGTTCTCCAGTCGAGGGTG+TGG | - | chr2.4:3445151-3445170 | MS.gene85149:intron | 65.0% | |
| TCCCCGGCGGGCATTAACAG+GGG | + | chr2.4:3444787-3444806 | None:intergenic | 65.0% | |
| TCCCCTGTTAATGCCCGCCG+GGG | - | chr2.4:3444783-3444802 | MS.gene85149:CDS | 65.0% | |
| ! | GGCCTTGCCACTTCTGGTGG+TGG | + | chr2.4:3445206-3445225 | None:intergenic | 65.0% |
| ! | GTCGAGGGTGTGGTTCAGCC+TGG | - | chr2.4:3445161-3445180 | MS.gene85149:intron | 65.0% |
| GGGTGCCTGGCAGTGGGTAG+AGG | + | chr2.4:3447972-3447991 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 3444717 | 3448133 | 3444717 | ID=MS.gene85149 |
| chr2.4 | mRNA | 3444717 | 3448133 | 3444717 | ID=MS.gene85149.t1;Parent=MS.gene85149 |
| chr2.4 | exon | 3447559 | 3448133 | 3447559 | ID=MS.gene85149.t1.exon1;Parent=MS.gene85149.t1 |
| chr2.4 | CDS | 3447559 | 3448133 | 3447559 | ID=cds.MS.gene85149.t1;Parent=MS.gene85149.t1 |
| chr2.4 | exon | 3445288 | 3445399 | 3445288 | ID=MS.gene85149.t1.exon2;Parent=MS.gene85149.t1 |
| chr2.4 | CDS | 3445288 | 3445399 | 3445288 | ID=cds.MS.gene85149.t1;Parent=MS.gene85149.t1 |
| chr2.4 | exon | 3444717 | 3445022 | 3444717 | ID=MS.gene85149.t1.exon3;Parent=MS.gene85149.t1 |
| chr2.4 | CDS | 3444717 | 3445022 | 3444717 | ID=cds.MS.gene85149.t1;Parent=MS.gene85149.t1 |
| Gene Sequence |
| Protein sequence |
