Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066206.t1 | XP_013452069.1 | 96.5 | 376 | 11 | 2 | 1 | 375 | 1 | 375 | 1.10E-194 | 689.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066206.t1 | Q9SAK5 | 58.3 | 384 | 122 | 16 | 4 | 375 | 1 | 358 | 7.9e-88 | 325.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066206.t1 | A0A072U8X3 | 96.5 | 376 | 11 | 2 | 1 | 375 | 1 | 375 | 8.2e-195 | 689.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene066206.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene066206 | 0.837418 | 5.26E-57 | -1.69E-46 |
| MS.gene049151 | MS.gene066206 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene066206 | 0.839819 | 1.26E-57 | -1.69E-46 |
| MS.gene049233 | MS.gene066206 | 0.811787 | 5.88E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene066206 | 0.833287 | 5.82E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene066206 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene066206 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene066206 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene066206 | 0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene066206 | 0.828521 | 8.58E-55 | -1.69E-46 |
| MS.gene050680 | MS.gene066206 | 0.877053 | 8.55E-69 | -1.69E-46 |
| MS.gene050750 | MS.gene066206 | 0.826029 | 3.39E-54 | -1.69E-46 |
| MS.gene050787 | MS.gene066206 | 0.810217 | 1.29E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene066206 | 0.826589 | 2.50E-54 | -1.69E-46 |
| MS.gene050826 | MS.gene066206 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene050900 | MS.gene066206 | 0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene066206 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene066206 | 0.802848 | 4.62E-49 | -1.69E-46 |
| MS.gene051568 | MS.gene066206 | 0.802109 | 6.56E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene066206 | 0.819251 | 1.28E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene066206 | 0.824225 | 9.06E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene066206 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene066206 | 0.824513 | 7.75E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene066206 | 0.835655 | 1.48E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene066206 | 0.808804 | 2.59E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene066206 | 0.810625 | 1.05E-50 | -1.69E-46 |
| MS.gene05288 | MS.gene066206 | 0.822308 | 2.54E-53 | -1.69E-46 |
| MS.gene05289 | MS.gene066206 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene066206 | 0.860755 | 1.66E-63 | -1.69E-46 |
| MS.gene053184 | MS.gene066206 | 0.825092 | 5.66E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene066206 | 0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene053494 | MS.gene066206 | 0.867188 | 1.64E-65 | -1.69E-46 |
| MS.gene053555 | MS.gene066206 | 0.801502 | 8.74E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene066206 | 0.836529 | 8.87E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene066206 | 0.813724 | 2.21E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene066206 | 0.829361 | 5.37E-55 | -1.69E-46 |
| MS.gene054379 | MS.gene066206 | 0.821566 | 3.77E-53 | -1.69E-46 |
| MS.gene054405 | MS.gene066206 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene066206 | 0.82658 | 2.51E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene066206 | 0.827846 | 1.25E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene066206 | 0.806467 | 8.11E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene066206 | 0.847284 | 1.27E-59 | -1.69E-46 |
| MS.gene054610 | MS.gene066206 | 0.822078 | 2.87E-53 | -1.69E-46 |
| MS.gene054713 | MS.gene066206 | 0.814622 | 1.40E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene066206 | 0.845888 | 3.07E-59 | -1.69E-46 |
| MS.gene05510 | MS.gene066206 | 0.84536 | 4.26E-59 | -1.69E-46 |
| MS.gene055356 | MS.gene066206 | 0.866945 | 1.97E-65 | -1.69E-46 |
| MS.gene055357 | MS.gene066206 | 0.808591 | 2.87E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene066206 | 0.853305 | 2.61E-61 | -1.69E-46 |
| MS.gene055367 | MS.gene066206 | 0.831345 | 1.76E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene066206 | 0.889031 | 3.49E-73 | -1.69E-46 |
| MS.gene055926 | MS.gene066206 | 0.813491 | 2.49E-51 | -1.69E-46 |
| MS.gene05595 | MS.gene066206 | 0.831895 | 1.29E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene066206 | 0.811866 | 5.65E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene066206 | 0.804773 | 1.84E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene066206 | 0.830071 | 3.61E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene066206 | 0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene057156 | MS.gene066206 | -0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene066206 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene066206 | 0.800614 | 1.33E-48 | -1.69E-46 |
| MS.gene057394 | MS.gene066206 | 0.833531 | 5.06E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene066206 | 0.855071 | 8.07E-62 | -1.69E-46 |
| MS.gene05761 | MS.gene066206 | 0.804746 | 1.86E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene066206 | 0.829956 | 3.85E-55 | -1.69E-46 |
| MS.gene057750 | MS.gene066206 | 0.843394 | 1.44E-58 | -1.69E-46 |
| MS.gene057863 | MS.gene066206 | 0.808754 | 2.65E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene066206 | 0.819791 | 9.65E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene066206 | 0.809514 | 1.82E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene066206 | 0.81371 | 2.23E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene066206 | 0.802923 | 4.45E-49 | -1.69E-46 |
| MS.gene05872 | MS.gene066206 | 0.835782 | 1.37E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene066206 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene059124 | MS.gene066206 | 0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene066206 | 0.86556 | 5.40E-65 | -1.69E-46 |
| MS.gene059161 | MS.gene066206 | 0.827714 | 1.34E-54 | -1.69E-46 |
| MS.gene059609 | MS.gene066206 | 0.843554 | 1.30E-58 | -1.69E-46 |
| MS.gene05973 | MS.gene066206 | 0.804645 | 1.96E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene066206 | 0.814722 | 1.33E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene066206 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene066206 | -0.808949 | 2.41E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene066206 | 0.828158 | 1.05E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene066206 | 0.833132 | 6.36E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene066206 | 0.836028 | 1.19E-56 | -1.69E-46 |
| MS.gene060802 | MS.gene066206 | 0.815462 | 9.13E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene066206 | 0.841239 | 5.36E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene066206 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene066206 | -0.850725 | 1.41E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066206.t1 | MTR_6g444980 | 98.138 | 376 | 5 | 2 | 1 | 375 | 1 | 375 | 0.0 | 755 |
| MS.gene066206.t1 | MTR_6g444980 | 90.957 | 376 | 5 | 2 | 1 | 375 | 1 | 348 | 0.0 | 689 |
| MS.gene066206.t1 | MTR_2g086450 | 56.213 | 169 | 57 | 3 | 25 | 176 | 35 | 203 | 1.91e-52 | 179 |
| MS.gene066206.t1 | MTR_5g027440 | 53.988 | 163 | 60 | 4 | 22 | 171 | 10 | 170 | 9.55e-52 | 174 |
| MS.gene066206.t1 | MTR_6g032990 | 54.878 | 164 | 61 | 2 | 28 | 178 | 35 | 198 | 6.46e-51 | 175 |
| MS.gene066206.t1 | MTR_4g081710 | 54.839 | 155 | 60 | 3 | 28 | 173 | 10 | 163 | 1.46e-49 | 170 |
| MS.gene066206.t1 | MTR_5g041350 | 55.280 | 161 | 55 | 3 | 28 | 175 | 8 | 164 | 3.31e-49 | 169 |
| MS.gene066206.t1 | MTR_1g090670 | 51.397 | 179 | 74 | 4 | 14 | 183 | 23 | 197 | 4.35e-47 | 162 |
| MS.gene066206.t1 | MTR_2g027800 | 52.632 | 171 | 69 | 4 | 23 | 183 | 27 | 195 | 4.89e-47 | 162 |
| MS.gene066206.t1 | MTR_7g088070 | 55.405 | 148 | 62 | 3 | 35 | 181 | 50 | 194 | 8.13e-45 | 155 |
| MS.gene066206.t1 | MTR_7g088070 | 55.102 | 147 | 60 | 3 | 35 | 181 | 50 | 190 | 1.71e-43 | 152 |
| MS.gene066206.t1 | MTR_2g027860 | 57.746 | 142 | 52 | 3 | 35 | 173 | 49 | 185 | 2.87e-43 | 153 |
| MS.gene066206.t1 | MTR_2g027800 | 46.927 | 179 | 53 | 4 | 23 | 183 | 27 | 181 | 6.97e-42 | 149 |
| MS.gene066206.t1 | MTR_7g098250 | 48.529 | 136 | 59 | 3 | 35 | 166 | 262 | 390 | 6.58e-34 | 131 |
| MS.gene066206.t1 | MTR_7g115530 | 41.772 | 158 | 81 | 3 | 35 | 189 | 218 | 367 | 2.22e-33 | 129 |
| MS.gene066206.t1 | MTR_1g080330 | 45.070 | 142 | 75 | 2 | 25 | 166 | 165 | 303 | 5.05e-33 | 127 |
| MS.gene066206.t1 | MTR_1g053835 | 43.571 | 140 | 74 | 1 | 31 | 170 | 254 | 388 | 2.47e-30 | 120 |
| MS.gene066206.t1 | MTR_7g093030 | 37.640 | 178 | 98 | 5 | 31 | 201 | 208 | 379 | 1.84e-28 | 114 |
| MS.gene066206.t1 | MTR_7g068600 | 45.455 | 132 | 66 | 2 | 35 | 163 | 13 | 141 | 1.10e-26 | 106 |
| MS.gene066206.t1 | MTR_1g080330 | 45.455 | 121 | 63 | 2 | 25 | 145 | 165 | 282 | 1.48e-25 | 104 |
| MS.gene066206.t1 | MTR_1g053800 | 38.462 | 156 | 84 | 2 | 25 | 176 | 167 | 314 | 2.81e-25 | 104 |
| MS.gene066206.t1 | MTR_7g115530 | 44.737 | 114 | 54 | 2 | 35 | 145 | 218 | 325 | 8.48e-25 | 103 |
| MS.gene066206.t1 | MTR_1g090670 | 42.361 | 144 | 63 | 5 | 67 | 194 | 1 | 140 | 5.58e-20 | 87.8 |
| MS.gene066206.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 35 | 91 | 218 | 274 | 8.59e-20 | 89.0 |
| MS.gene066206.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 35 | 91 | 218 | 274 | 3.20e-19 | 88.2 |
| MS.gene066206.t1 | MTR_7g093030 | 54.098 | 61 | 28 | 0 | 31 | 91 | 208 | 268 | 2.70e-18 | 84.7 |
| MS.gene066206.t1 | MTR_7g115530 | 66.038 | 53 | 18 | 0 | 35 | 87 | 218 | 270 | 3.30e-18 | 84.0 |
| MS.gene066206.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 35 | 85 | 218 | 268 | 2.37e-17 | 82.0 |
| MS.gene066206.t1 | MTR_2g023580 | 61.404 | 57 | 22 | 0 | 36 | 92 | 56 | 112 | 3.29e-16 | 77.8 |
| MS.gene066206.t1 | MTR_0223s0040 | 39.062 | 128 | 58 | 3 | 36 | 143 | 19 | 146 | 6.31e-16 | 77.8 |
| MS.gene066206.t1 | MTR_3g450310 | 61.111 | 54 | 21 | 0 | 35 | 88 | 19 | 72 | 8.26e-16 | 75.9 |
| MS.gene066206.t1 | MTR_6g071625 | 56.667 | 60 | 26 | 0 | 36 | 95 | 203 | 262 | 2.95e-15 | 76.6 |
| MS.gene066206.t1 | MTR_7g069660 | 44.444 | 81 | 45 | 0 | 11 | 91 | 47 | 127 | 3.27e-15 | 76.6 |
| MS.gene066206.t1 | MTR_1g112370 | 56.452 | 62 | 22 | 1 | 36 | 92 | 23 | 84 | 5.07e-15 | 75.9 |
| MS.gene066206.t1 | MTR_3g064840 | 51.429 | 70 | 34 | 0 | 36 | 105 | 275 | 344 | 5.52e-15 | 76.6 |
| MS.gene066206.t1 | MTR_1g021520 | 52.239 | 67 | 32 | 0 | 36 | 102 | 127 | 193 | 6.57e-15 | 75.1 |
| MS.gene066206.t1 | MTR_8g066310 | 58.929 | 56 | 23 | 0 | 36 | 91 | 174 | 229 | 7.94e-15 | 75.5 |
| MS.gene066206.t1 | MTR_1g053830 | 49.091 | 55 | 28 | 0 | 37 | 91 | 20 | 74 | 9.31e-15 | 70.1 |
| MS.gene066206.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 36 | 91 | 220 | 275 | 1.09e-14 | 75.1 |
| MS.gene066206.t1 | MTR_5g041350 | 69.565 | 46 | 14 | 0 | 130 | 175 | 8 | 53 | 3.32e-14 | 72.0 |
| MS.gene066206.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 36 | 91 | 112 | 167 | 4.89e-14 | 73.6 |
| MS.gene066206.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 36 | 91 | 110 | 165 | 5.04e-14 | 73.6 |
| MS.gene066206.t1 | MTR_5g041350 | 69.565 | 46 | 14 | 0 | 130 | 175 | 30 | 75 | 6.07e-14 | 71.6 |
| MS.gene066206.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 36 | 91 | 90 | 145 | 8.68e-14 | 72.4 |
| MS.gene066206.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 36 | 91 | 98 | 153 | 8.86e-14 | 71.6 |
| MS.gene066206.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 36 | 91 | 98 | 153 | 8.93e-14 | 72.4 |
| MS.gene066206.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 36 | 91 | 90 | 145 | 9.12e-14 | 72.4 |
| MS.gene066206.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 107 | 164 | 9.38e-14 | 72.8 |
| MS.gene066206.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 211 | 268 | 1.12e-13 | 72.8 |
| MS.gene066206.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 211 | 268 | 1.14e-13 | 72.8 |
| MS.gene066206.t1 | MTR_7g093010 | 36.364 | 132 | 72 | 4 | 35 | 161 | 213 | 337 | 1.29e-13 | 71.6 |
| MS.gene066206.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 35 | 89 | 131 | 184 | 2.62e-13 | 71.6 |
| MS.gene066206.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 35 | 89 | 200 | 253 | 3.16e-13 | 71.2 |
| MS.gene066206.t1 | MTR_8g086410 | 56.000 | 50 | 22 | 0 | 36 | 85 | 112 | 161 | 7.60e-13 | 69.7 |
| MS.gene066206.t1 | MTR_4g064730 | 52.174 | 69 | 31 | 2 | 22 | 89 | 117 | 184 | 9.08e-13 | 68.9 |
| MS.gene066206.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 36 | 85 | 90 | 139 | 9.59e-13 | 69.3 |
| MS.gene066206.t1 | MTR_1g093080 | 60.000 | 55 | 22 | 0 | 35 | 89 | 211 | 265 | 1.41e-12 | 68.9 |
| MS.gene066206.t1 | MTR_2g034960 | 53.333 | 60 | 27 | 1 | 30 | 89 | 206 | 264 | 1.41e-12 | 69.3 |
| MS.gene066206.t1 | MTR_7g089010 | 60.000 | 55 | 21 | 1 | 35 | 89 | 91 | 144 | 2.41e-12 | 67.4 |
| MS.gene066206.t1 | MTR_5g017980 | 60.000 | 55 | 22 | 0 | 35 | 89 | 193 | 247 | 3.50e-12 | 67.0 |
| MS.gene066206.t1 | MTR_4g021790 | 52.542 | 59 | 27 | 1 | 31 | 89 | 164 | 221 | 1.37e-11 | 64.7 |
| MS.gene066206.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 35 | 89 | 198 | 252 | 1.79e-11 | 65.5 |
| MS.gene066206.t1 | MTR_4g086835 | 55.172 | 58 | 26 | 0 | 32 | 89 | 271 | 328 | 7.39e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066206.t1 | AT1G79430 | 56.888 | 392 | 115 | 15 | 4 | 375 | 1 | 358 | 5.23e-125 | 364 |
| MS.gene066206.t1 | AT1G79430 | 51.376 | 327 | 107 | 14 | 67 | 375 | 1 | 293 | 6.11e-82 | 252 |
| MS.gene066206.t1 | AT3G12730 | 71.053 | 152 | 39 | 3 | 24 | 170 | 12 | 163 | 3.94e-70 | 220 |
| MS.gene066206.t1 | AT4G13640 | 64.634 | 164 | 49 | 1 | 25 | 179 | 27 | 190 | 5.12e-64 | 206 |
| MS.gene066206.t1 | AT3G24120 | 67.702 | 161 | 35 | 4 | 24 | 171 | 30 | 186 | 8.94e-63 | 203 |
| MS.gene066206.t1 | AT4G13640 | 63.473 | 167 | 49 | 2 | 25 | 179 | 27 | 193 | 6.72e-62 | 201 |
| MS.gene066206.t1 | AT3G24120 | 66.463 | 164 | 35 | 5 | 24 | 171 | 30 | 189 | 1.33e-60 | 197 |
| MS.gene066206.t1 | AT3G04030 | 60.355 | 169 | 53 | 4 | 24 | 179 | 34 | 201 | 5.37e-57 | 191 |
| MS.gene066206.t1 | AT5G18240 | 60.947 | 169 | 52 | 4 | 24 | 179 | 34 | 201 | 2.21e-56 | 189 |
| MS.gene066206.t1 | AT5G18240 | 60.947 | 169 | 52 | 4 | 24 | 179 | 34 | 201 | 2.21e-56 | 189 |
| MS.gene066206.t1 | AT3G04030 | 59.172 | 169 | 54 | 5 | 24 | 179 | 34 | 200 | 6.07e-54 | 183 |
| MS.gene066206.t1 | AT5G18240 | 59.763 | 169 | 52 | 5 | 24 | 179 | 34 | 199 | 5.00e-53 | 181 |
| MS.gene066206.t1 | AT3G04030 | 57.396 | 169 | 52 | 5 | 24 | 179 | 34 | 195 | 1.75e-50 | 174 |
| MS.gene066206.t1 | AT5G18240 | 57.988 | 169 | 51 | 5 | 24 | 179 | 34 | 195 | 8.45e-50 | 172 |
| MS.gene066206.t1 | AT5G18240 | 57.988 | 169 | 51 | 5 | 24 | 179 | 34 | 195 | 8.45e-50 | 172 |
| MS.gene066206.t1 | AT1G69580 | 52.439 | 164 | 58 | 3 | 27 | 173 | 26 | 186 | 2.74e-48 | 167 |
| MS.gene066206.t1 | AT1G69580 | 51.829 | 164 | 60 | 2 | 27 | 173 | 26 | 187 | 4.56e-48 | 166 |
| MS.gene066206.t1 | AT5G45580 | 47.853 | 163 | 68 | 2 | 25 | 171 | 13 | 174 | 1.55e-43 | 152 |
| MS.gene066206.t1 | AT5G45580 | 43.716 | 183 | 86 | 2 | 29 | 195 | 1 | 182 | 1.62e-42 | 149 |
| MS.gene066206.t1 | AT2G01060 | 56.338 | 142 | 53 | 3 | 35 | 173 | 15 | 150 | 1.94e-42 | 150 |
| MS.gene066206.t1 | AT3G12730 | 64.220 | 109 | 34 | 3 | 67 | 170 | 1 | 109 | 2.26e-39 | 139 |
| MS.gene066206.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 4.32e-34 | 131 |
| MS.gene066206.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 4.32e-34 | 131 |
| MS.gene066206.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 4.32e-34 | 131 |
| MS.gene066206.t1 | AT5G06800 | 46.269 | 134 | 69 | 2 | 35 | 166 | 192 | 324 | 1.03e-31 | 123 |
| MS.gene066206.t1 | AT4G28610 | 45.588 | 136 | 64 | 3 | 35 | 166 | 225 | 354 | 1.31e-31 | 124 |
| MS.gene066206.t1 | AT5G06800 | 47.368 | 133 | 64 | 3 | 35 | 166 | 192 | 319 | 4.01e-31 | 122 |
| MS.gene066206.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 188 | 349 | 6.85e-31 | 121 |
| MS.gene066206.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 188 | 349 | 6.85e-31 | 121 |
| MS.gene066206.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 231 | 392 | 1.24e-30 | 121 |
| MS.gene066206.t1 | AT3G04030 | 54.762 | 126 | 43 | 4 | 67 | 179 | 1 | 125 | 6.72e-30 | 117 |
| MS.gene066206.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 198 | 344 | 1.72e-29 | 118 |
| MS.gene066206.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 198 | 344 | 1.72e-29 | 118 |
| MS.gene066206.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 238 | 384 | 2.55e-29 | 118 |
| MS.gene066206.t1 | AT2G20400 | 42.000 | 150 | 79 | 3 | 35 | 181 | 231 | 375 | 2.10e-26 | 109 |
| MS.gene066206.t1 | AT2G20400 | 41.333 | 150 | 79 | 2 | 35 | 181 | 231 | 374 | 5.13e-26 | 108 |
| MS.gene066206.t1 | AT3G04030 | 50.794 | 126 | 42 | 5 | 67 | 179 | 1 | 119 | 1.12e-23 | 100 |
| MS.gene066206.t1 | AT5G18240 | 50.794 | 126 | 42 | 5 | 67 | 179 | 1 | 119 | 2.94e-23 | 99.4 |
| MS.gene066206.t1 | AT2G06020 | 59.375 | 64 | 26 | 0 | 28 | 91 | 79 | 142 | 8.68e-21 | 92.0 |
| MS.gene066206.t1 | AT2G01060 | 48.598 | 107 | 46 | 3 | 70 | 173 | 1 | 101 | 2.39e-20 | 89.4 |
| MS.gene066206.t1 | AT5G06800 | 59.649 | 57 | 23 | 0 | 35 | 91 | 192 | 248 | 3.14e-18 | 84.3 |
| MS.gene066206.t1 | AT5G29000 | 57.895 | 57 | 24 | 0 | 35 | 91 | 231 | 287 | 2.73e-17 | 82.0 |
| MS.gene066206.t1 | AT3G04450 | 56.140 | 57 | 25 | 0 | 35 | 91 | 238 | 294 | 3.04e-17 | 82.0 |
| MS.gene066206.t1 | AT1G14600 | 50.685 | 73 | 31 | 1 | 21 | 88 | 4 | 76 | 2.27e-16 | 78.6 |
| MS.gene066206.t1 | AT2G40260 | 60.714 | 56 | 22 | 0 | 36 | 91 | 83 | 138 | 8.16e-16 | 79.0 |
| MS.gene066206.t1 | AT2G42660 | 58.929 | 56 | 23 | 0 | 36 | 91 | 51 | 106 | 1.03e-15 | 76.6 |
| MS.gene066206.t1 | AT4G04605 | 58.491 | 53 | 22 | 0 | 36 | 88 | 15 | 67 | 1.07e-15 | 75.9 |
| MS.gene066206.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 34 | 92 | 28 | 86 | 2.61e-15 | 75.5 |
| MS.gene066206.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 34 | 92 | 28 | 86 | 2.61e-15 | 75.5 |
| MS.gene066206.t1 | AT5G16560 | 56.667 | 60 | 26 | 0 | 36 | 95 | 220 | 279 | 6.33e-15 | 76.3 |
| MS.gene066206.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 36 | 95 | 214 | 273 | 6.40e-15 | 75.9 |
| MS.gene066206.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 36 | 95 | 214 | 273 | 7.54e-15 | 75.9 |
| MS.gene066206.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 36 | 91 | 106 | 161 | 1.58e-14 | 72.8 |
| MS.gene066206.t1 | AT2G38300 | 57.143 | 56 | 24 | 0 | 36 | 91 | 55 | 110 | 1.64e-14 | 74.3 |
| MS.gene066206.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 36 | 91 | 106 | 161 | 2.40e-14 | 73.2 |
| MS.gene066206.t1 | AT4G17695 | 35.644 | 101 | 65 | 0 | 36 | 136 | 165 | 265 | 3.03e-14 | 73.2 |
| MS.gene066206.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.12e-13 | 70.9 |
| MS.gene066206.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.12e-13 | 70.9 |
| MS.gene066206.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.70e-13 | 70.5 |
| MS.gene066206.t1 | AT5G59570 | 52.857 | 70 | 29 | 2 | 23 | 89 | 126 | 194 | 4.51e-13 | 69.7 |
| MS.gene066206.t1 | AT5G59570 | 52.857 | 70 | 29 | 2 | 23 | 89 | 126 | 194 | 4.51e-13 | 69.7 |
| MS.gene066206.t1 | AT4G04580 | 49.123 | 57 | 29 | 0 | 36 | 92 | 15 | 71 | 6.67e-13 | 66.6 |
| MS.gene066206.t1 | AT5G05090 | 60.000 | 55 | 21 | 1 | 35 | 89 | 81 | 134 | 7.47e-13 | 68.6 |
| MS.gene066206.t1 | AT3G10760 | 60.000 | 55 | 21 | 1 | 35 | 89 | 105 | 158 | 1.01e-12 | 68.9 |
| MS.gene066206.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 37 | 94 | 212 | 269 | 1.52e-12 | 68.6 |
| MS.gene066206.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 37 | 94 | 219 | 276 | 1.76e-12 | 68.6 |
| MS.gene066206.t1 | AT2G40970 | 60.000 | 55 | 21 | 1 | 35 | 89 | 105 | 158 | 2.27e-12 | 67.0 |
| MS.gene066206.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 167 | 220 | 6.16e-12 | 67.4 |
| MS.gene066206.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 237 | 290 | 7.26e-12 | 67.4 |
| MS.gene066206.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 237 | 290 | 7.28e-12 | 67.4 |
| MS.gene066206.t1 | AT5G58080 | 55.172 | 58 | 25 | 1 | 32 | 89 | 191 | 247 | 8.46e-12 | 67.0 |
| MS.gene066206.t1 | AT3G25790 | 60.000 | 50 | 20 | 0 | 40 | 89 | 201 | 250 | 9.14e-12 | 66.2 |
| MS.gene066206.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 135 | 188 | 1.11e-11 | 65.5 |
| MS.gene066206.t1 | AT1G49560 | 60.000 | 55 | 22 | 0 | 35 | 89 | 192 | 246 | 1.55e-11 | 65.5 |
| MS.gene066206.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 200 | 253 | 1.94e-11 | 65.5 |
| MS.gene066206.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 228 | 281 | 2.98e-11 | 65.1 |
| MS.gene066206.t1 | AT5G44190 | 41.463 | 82 | 40 | 2 | 35 | 116 | 147 | 220 | 4.53e-11 | 64.3 |
| MS.gene066206.t1 | AT5G44190 | 41.463 | 82 | 40 | 2 | 35 | 116 | 147 | 220 | 5.22e-11 | 63.9 |
| MS.gene066206.t1 | AT1G13300 | 54.545 | 55 | 25 | 0 | 35 | 89 | 181 | 235 | 8.74e-11 | 63.2 |
Find 96 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGACTATTGAAAGAATT+TGG | 0.175321 | 2.2:+25534722 | MS.gene066206:CDS |
| GATTTAAGGCTTCAAGATTT+AGG | 0.193912 | 2.2:+25534962 | MS.gene066206:CDS |
| TGCTACAACTAATAACTTAA+AGG | 0.195092 | 2.2:+25534667 | MS.gene066206:CDS |
| TAATGTGGAGTGATGATTTA+AGG | 0.215191 | 2.2:+25534948 | MS.gene066206:CDS |
| AAATCATCACTCCACATTAA+TGG | 0.218919 | 2.2:-25534944 | None:intergenic |
| TTTCTATTACATAGAAATTT+AGG | 0.227246 | 2.2:+25533769 | MS.gene066206:intron |
| TTCATAGTTGAAGGCTTCTT+TGG | 0.249952 | 2.2:-25533130 | None:intergenic |
| AACTTAAAGGGCGTTGTTCT+TGG | 0.261188 | 2.2:+25534680 | MS.gene066206:CDS |
| CCACTATAAGGGTTAGTGTT+AGG | 0.267537 | 2.2:-25534908 | None:intergenic |
| GCATATATGCATGATGATCT+AGG | 0.285163 | 2.2:-25534844 | None:intergenic |
| ATTTAAGGCTTCAAGATTTA+GGG | 0.292742 | 2.2:+25534963 | MS.gene066206:CDS |
| AATCATCACTCCACATTAAT+GGG | 0.299412 | 2.2:-25534943 | None:intergenic |
| TAAAACTATCATGAGGGTTA+TGG | 0.306320 | 2.2:+25533409 | MS.gene066206:CDS |
| GAAATACATGCAAAGTATAT+TGG | 0.312337 | 2.2:+25534604 | MS.gene066206:CDS |
| ATTCAATGATCACTCAATTA+AGG | 0.327183 | 2.2:+25533815 | MS.gene066206:CDS |
| GTCCAACGAAGACGAGGTTT+TGG | 0.340512 | 2.2:-25533211 | None:intergenic |
| TCAAATTGCACCACCATCAT+TGG | 0.344106 | 2.2:+25535030 | MS.gene066206:CDS |
| CCATCTCAAGAGCCATCTTC+AGG | 0.344761 | 2.2:+25533454 | MS.gene066206:CDS |
| TGAAGAGATGGCCCTCTTCT+TGG | 0.346647 | 2.2:-25535169 | None:intergenic |
| TATGATTAGTACTGGTACTA+TGG | 0.347038 | 2.2:+25535210 | MS.gene066206:CDS |
| CACTATAAGGGTTAGTGTTA+GGG | 0.355596 | 2.2:-25534907 | None:intergenic |
| AAAGCTTATCAGACACTTGC+AGG | 0.356175 | 2.2:+25534629 | MS.gene066206:CDS |
| GCTTCCTCTTCGGCTATGAT+TGG | 0.358723 | 2.2:+25533994 | MS.gene066206:CDS |
| ACCTCATGGAATGGCTGAAA+TGG | 0.378868 | 2.2:+25534703 | MS.gene066206:CDS |
| GAGCTTCAATTCGTAGTTGA+AGG | 0.381017 | 2.2:-25534577 | None:intergenic |
| AAAACTATCATGAGGGTTAT+GGG | 0.387308 | 2.2:+25533410 | MS.gene066206:CDS |
| ACTAACCCTTATAGTGGAAA+TGG | 0.388772 | 2.2:+25534914 | MS.gene066206:CDS |
| CAGCATCAACAAAACGTTCA+TGG | 0.392478 | 2.2:-25533243 | None:intergenic |
| CAAGGTAGAGGCTCACCATT+TGG | 0.401119 | 2.2:+25535235 | MS.gene066206:CDS |
| GATACAAAGCCTTTACTTCA+AGG | 0.414154 | 2.2:+25535088 | MS.gene066206:CDS |
| TCATGTGAATTCATAGTTGA+AGG | 0.417635 | 2.2:-25533139 | None:intergenic |
| CCTAACACTAACCCTTATAG+TGG | 0.433462 | 2.2:+25534908 | MS.gene066206:CDS |
| GGCGTTGTTCTTGGACCTCA+TGG | 0.435582 | 2.2:+25534689 | MS.gene066206:CDS |
| ATGAGGGTTATGGGTGTAAA+GGG | 0.439033 | 2.2:+25533419 | MS.gene066206:CDS |
| GTTGATGCTGTTACTCAGCT+TGG | 0.442902 | 2.2:+25533256 | MS.gene066206:CDS |
| CATGAGGGTTATGGGTGTAA+AGG | 0.448006 | 2.2:+25533418 | MS.gene066206:CDS |
| AGGGACAGCTTCATCATGCT+TGG | 0.454830 | 2.2:+25534982 | MS.gene066206:CDS |
| TTTGTATTCAAACCTGAAGA+TGG | 0.457979 | 2.2:-25533466 | None:intergenic |
| TAAGGGTTAGTGTTAGGGTT+AGG | 0.458671 | 2.2:-25534902 | None:intergenic |
| ACGGAATACTGCTTCCTCTT+CGG | 0.462582 | 2.2:+25533984 | MS.gene066206:CDS |
| GCTACAACTAATAACTTAAA+GGG | 0.463497 | 2.2:+25534668 | MS.gene066206:CDS |
| AAAATGTCCCCTTGAAGTAA+AGG | 0.466984 | 2.2:-25535097 | None:intergenic |
| CATATATGCATGATGATCTA+GGG | 0.467621 | 2.2:-25534843 | None:intergenic |
| CACCACCACCGCCTCCGAAA+AGG | 0.470652 | 2.2:-25534781 | None:intergenic |
| GTGATCATTGAATTCCTTGT+GGG | 0.478768 | 2.2:-25533805 | None:intergenic |
| ACTTAAGCCTTGGCAAGAAA+AGG | 0.483728 | 2.2:+25534879 | MS.gene066206:CDS |
| ATAGTACCAGTACTAATCAT+AGG | 0.485418 | 2.2:-25535208 | None:intergenic |
| ATAGTTGAAGGCTTCTTTGG+AGG | 0.491992 | 2.2:-25533127 | None:intergenic |
| ATACAAAGCCTTTACTTCAA+GGG | 0.494350 | 2.2:+25535089 | MS.gene066206:CDS |
| ATAACTAATTCTCATCCAAA+TGG | 0.494435 | 2.2:-25535250 | None:intergenic |
| GATAGACCCATGTGTGTTCA+AGG | 0.496295 | 2.2:+25533160 | MS.gene066206:CDS |
| ATTACATAGAAATTTAGGCT+TGG | 0.496295 | 2.2:+25533774 | MS.gene066206:intron |
| CCTCATGGAATGGCTGAAAT+GGG | 0.498758 | 2.2:+25534704 | MS.gene066206:CDS |
| TAGTTGAAGGCTTCTTTGGA+GGG | 0.504455 | 2.2:-25533126 | None:intergenic |
| TGAATTTGATCACCTTTGAA+AGG | 0.506520 | 2.2:-25535010 | None:intergenic |
| ATGGCTCTTGAGATGGTAAA+GGG | 0.513730 | 2.2:-25533447 | None:intergenic |
| ATGAGTCCTATGATTAGTAC+TGG | 0.525466 | 2.2:+25535202 | MS.gene066206:CDS |
| ACCCAAAACCTCGTCTTCGT+TGG | 0.527604 | 2.2:+25533209 | MS.gene066206:CDS |
| GATGGCCCTCTTCTTGGTGA+GGG | 0.531501 | 2.2:-25535163 | None:intergenic |
| TCACTTCCTCTATCCAATGA+TGG | 0.535417 | 2.2:-25535043 | None:intergenic |
| GATGGCTCTTGAGATGGTAA+AGG | 0.536000 | 2.2:-25533448 | None:intergenic |
| TGTTCTTGGACCTCATGGAA+TGG | 0.536570 | 2.2:+25534694 | MS.gene066206:CDS |
| AGATGGCCCTCTTCTTGGTG+AGG | 0.537995 | 2.2:-25535164 | None:intergenic |
| GCACCACCATCATTGGATAG+AGG | 0.539525 | 2.2:+25535037 | MS.gene066206:CDS |
| ATCAATGAGAACTTAAGCCT+TGG | 0.540269 | 2.2:+25534869 | MS.gene066206:CDS |
| ATGTGTGTTCAAGGTGACTC+AGG | 0.543370 | 2.2:+25533169 | MS.gene066206:CDS |
| TACAAAGCCTTTACTTCAAG+GGG | 0.548668 | 2.2:+25535090 | MS.gene066206:CDS |
| GGTACTATGGCACAAGGTAG+AGG | 0.548888 | 2.2:+25535223 | MS.gene066206:CDS |
| CCTGAAGATGGCTCTTGAGA+TGG | 0.549039 | 2.2:-25533454 | None:intergenic |
| TGCTTGGATGATCCTTTCAA+AGG | 0.557843 | 2.2:+25534998 | MS.gene066206:CDS |
| GATGCTGTTACTCAGCTTGG+AGG | 0.559349 | 2.2:+25533259 | MS.gene066206:CDS |
| CAACTACGAATTGAAGCTCA+AGG | 0.565636 | 2.2:+25534581 | MS.gene066206:CDS |
| ATGCATACTCATTCATGTTG+CGG | 0.570245 | 2.2:-25534017 | None:intergenic |
| ATTCTTTCAGCATGAAGAGA+TGG | 0.571803 | 2.2:-25535181 | None:intergenic |
| GACACTTGCAGGTGAAAACA+TGG | 0.571973 | 2.2:+25534640 | MS.gene066206:CDS |
| CTTCAGCTTTAGAACTGCAA+CGG | 0.582298 | 2.2:+25533965 | MS.gene066206:CDS |
| TGAGTCACCTTGAACACACA+TGG | 0.598179 | 2.2:-25533167 | None:intergenic |
| GAAAGACCCTCACCAAGAAG+AGG | 0.599610 | 2.2:+25535157 | MS.gene066206:CDS |
| AATGATCACTCAATTAAGGA+TGG | 0.602702 | 2.2:+25533819 | MS.gene066206:CDS |
| TCAATTAAGGATGGTATGAG+AGG | 0.611305 | 2.2:+25533828 | MS.gene066206:CDS |
| AAAGACCCTCACCAAGAAGA+GGG | 0.613710 | 2.2:+25535158 | MS.gene066206:CDS |
| GCTTGGAAAGCAACCCCACA+AGG | 0.615422 | 2.2:+25533791 | MS.gene066206:CDS |
| CCACTCCTAAAACTATCATG+AGG | 0.619863 | 2.2:+25533402 | MS.gene066206:CDS |
| ACTTGACCTTCAGCAAAACA+TGG | 0.622471 | 2.2:+25534811 | MS.gene066206:CDS |
| TGATCATTGAATTCCTTGTG+GGG | 0.623211 | 2.2:-25533804 | None:intergenic |
| AACTACGAATTGAAGCTCAA+GGG | 0.632870 | 2.2:+25534582 | MS.gene066206:CDS |
| CACTCCTAAAACTATCATGA+GGG | 0.634268 | 2.2:+25533403 | MS.gene066206:CDS |
| AGTGATCATTGAATTCCTTG+TGG | 0.639862 | 2.2:-25533806 | None:intergenic |
| TCAACAGTCCAACGAAGACG+AGG | 0.644546 | 2.2:-25533217 | None:intergenic |
| TGTAATCAGGATGCAAATTG+AGG | 0.645996 | 2.2:+25534233 | MS.gene066206:intron |
| CCCATTTCAGCCATTCCATG+AGG | 0.656331 | 2.2:-25534704 | None:intergenic |
| CTTCCTCTATCCAATGATGG+TGG | 0.659128 | 2.2:-25535040 | None:intergenic |
| GCGGCCAATCATAGCCGAAG+AGG | 0.663510 | 2.2:-25533998 | None:intergenic |
| AAGACTACATGAGCAACTTG+AGG | 0.669000 | 2.2:+25534263 | MS.gene066206:CDS |
| GAGTCACCTTGAACACACAT+GGG | 0.682407 | 2.2:-25533166 | None:intergenic |
| AGTACTGGTACTATGGCACA+AGG | 0.707110 | 2.2:+25535217 | MS.gene066206:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAAAAAAAAT+TGG | - | chr2.2:25533878-25533897 | None:intergenic | 0.0% |
| !! | ATAAATATAATACATAATCA+TGG | - | chr2.2:25533919-25533938 | None:intergenic | 10.0% |
| !! | TAAATATAATACATAATCAT+GGG | - | chr2.2:25533918-25533937 | None:intergenic | 10.0% |
| !!! | CTTTTTGTTATTTTTATATT+TGG | + | chr2.2:25533334-25533353 | MS.gene066206:intron | 10.0% |
| !! | AGGAAAAACAATAAAAAAAA+AGG | - | chr2.2:25533743-25533762 | None:intergenic | 15.0% |
| !! | ATACTAATTATGTAACAAAT+TGG | - | chr2.2:25534502-25534521 | None:intergenic | 15.0% |
| !! | TTAAAATAAGAGATGTATAA+TGG | - | chr2.2:25534058-25534077 | None:intergenic | 15.0% |
| !! | TTTCTATTACATAGAAATTT+AGG | + | chr2.2:25533769-25533788 | MS.gene066206:intron | 15.0% |
| !!! | TACATAATTAGTATTTTCAA+TGG | + | chr2.2:25534508-25534527 | MS.gene066206:intron | 15.0% |
| !!! | TTTTTTATGGTTAATTTTTC+AGG | + | chr2.2:25533688-25533707 | MS.gene066206:intron | 15.0% |
| !! | ATTGACAAGATCTTTATATA+TGG | + | chr2.2:25533939-25533958 | MS.gene066206:intron | 20.0% |
| !! | CATTACTAAGATATTTATGA+TGG | + | chr2.2:25533359-25533378 | MS.gene066206:intron | 20.0% |
| !! | TGAATTTAGTTGTATATTTC+AGG | + | chr2.2:25534544-25534563 | MS.gene066206:intron | 20.0% |
| !! | TTCTTTACAACACTTTAATA+TGG | + | chr2.2:25533523-25533542 | MS.gene066206:intron | 20.0% |
| !! | TTTATAAGTGCACATATATT+TGG | + | chr2.2:25534323-25534342 | MS.gene066206:intron | 20.0% |
| !!! | CAGCAAAATAATTTTTAACT+GGG | - | chr2.2:25533633-25533652 | None:intergenic | 20.0% |
| !!! | TGATCTGAATCTTTTTTTTA+TGG | + | chr2.2:25533675-25533694 | MS.gene066206:intron | 20.0% |
| !!! | TTGTTTTGAATCTTTTTGTT+GGG | + | chr2.2:25534142-25534161 | MS.gene066206:intron | 20.0% |
| !!! | TTTGTTTTGAATCTTTTTGT+TGG | + | chr2.2:25534141-25534160 | MS.gene066206:intron | 20.0% |
| ! | AATTGTATATATAGTGCATC+CGG | + | chr2.2:25534465-25534484 | MS.gene066206:intron | 25.0% |
| ! | AGATTCAAAACAAAAACATG+AGG | - | chr2.2:25534135-25534154 | None:intergenic | 25.0% |
| ! | ATAATACATAATCATGGGTA+AGG | - | chr2.2:25533913-25533932 | None:intergenic | 25.0% |
| ! | ATTACATAGAAATTTAGGCT+TGG | + | chr2.2:25533774-25533793 | MS.gene066206:intron | 25.0% |
| ! | ATTCAATGATCACTCAATTA+AGG | + | chr2.2:25533815-25533834 | MS.gene066206:CDS | 25.0% |
| ! | CTATGTAATAGAAACAACAA+AGG | - | chr2.2:25533763-25533782 | None:intergenic | 25.0% |
| ! | GAAATACATGCAAAGTATAT+TGG | + | chr2.2:25534604-25534623 | MS.gene066206:CDS | 25.0% |
| ! | GCTACAACTAATAACTTAAA+GGG | + | chr2.2:25534668-25534687 | MS.gene066206:CDS | 25.0% |
| ! | TGAAAAGATGAAAAACTAAG+AGG | - | chr2.2:25534752-25534771 | None:intergenic | 25.0% |
| ! | TGCTACAACTAATAACTTAA+AGG | + | chr2.2:25534667-25534686 | MS.gene066206:CDS | 25.0% |
| ! | TTTGAGAAGAGAAAGAAAAA+AGG | - | chr2.2:25533310-25533329 | None:intergenic | 25.0% |
| !! | ATTTAAGGCTTCAAGATTTA+GGG | + | chr2.2:25534963-25534982 | MS.gene066206:CDS | 25.0% |
| !! | GCAGCAAAATAATTTTTAAC+TGG | - | chr2.2:25533634-25533653 | None:intergenic | 25.0% |
| !! | TTTTTCCATTTCCACTATAA+GGG | - | chr2.2:25534922-25534941 | None:intergenic | 25.0% |
| !!! | TAAAAATTATTTTGCTGCAC+CGG | + | chr2.2:25533636-25533655 | MS.gene066206:intron | 25.0% |
| !!! | TGGTTTCTTAAATTTTTCAG+AGG | + | chr2.2:25533379-25533398 | MS.gene066206:intron | 25.0% |
| !!! | TGTTTTGAATCTTTTTGTTG+GGG | + | chr2.2:25534143-25534162 | MS.gene066206:intron | 25.0% |
| !!! | TTTTTTCCATTTCCACTATA+AGG | - | chr2.2:25534923-25534942 | None:intergenic | 25.0% |
| AAAACTATCATGAGGGTTAT+GGG | + | chr2.2:25533410-25533429 | MS.gene066206:CDS | 30.0% | |
| AAATCATCACTCCACATTAA+TGG | - | chr2.2:25534947-25534966 | None:intergenic | 30.0% | |
| AATCATCACTCCACATTAAT+GGG | - | chr2.2:25534946-25534965 | None:intergenic | 30.0% | |
| AATGATCACTCAATTAAGGA+TGG | + | chr2.2:25533819-25533838 | MS.gene066206:CDS | 30.0% | |
| ATACAAAGCCTTTACTTCAA+GGG | + | chr2.2:25535089-25535108 | MS.gene066206:CDS | 30.0% | |
| ATAGTACCAGTACTAATCAT+AGG | - | chr2.2:25535211-25535230 | None:intergenic | 30.0% | |
| ATGGAAAAAACCCATTAATG+TGG | + | chr2.2:25534933-25534952 | MS.gene066206:CDS | 30.0% | |
| ATGGGACTATTGAAAGAATT+TGG | + | chr2.2:25534722-25534741 | MS.gene066206:CDS | 30.0% | |
| CATATATGCATGATGATCTA+GGG | - | chr2.2:25534846-25534865 | None:intergenic | 30.0% | |
| CTTGTACAAAAATTTGCAAC+CGG | + | chr2.2:25533590-25533609 | MS.gene066206:intron | 30.0% | |
| GTTTGACGAAATTATAACGA+TGG | + | chr2.2:25534357-25534376 | MS.gene066206:intron | 30.0% | |
| TAAAACTATCATGAGGGTTA+TGG | + | chr2.2:25533409-25533428 | MS.gene066206:CDS | 30.0% | |
| TAATGTGGAGTGATGATTTA+AGG | + | chr2.2:25534948-25534967 | MS.gene066206:CDS | 30.0% | |
| TCATGTGAATTCATAGTTGA+AGG | - | chr2.2:25533142-25533161 | None:intergenic | 30.0% | |
| TGAAAAACTATGCACTTTGA+AGG | - | chr2.2:25534401-25534420 | None:intergenic | 30.0% | |
| TGAATTTGATCACCTTTGAA+AGG | - | chr2.2:25535013-25535032 | None:intergenic | 30.0% | |
| TTGAATTAGTAACTCACACA+AGG | + | chr2.2:25534206-25534225 | MS.gene066206:intron | 30.0% | |
| TTTGTATTCAAACCTGAAGA+TGG | - | chr2.2:25533469-25533488 | None:intergenic | 30.0% | |
| ! | AAGAGATGTATAATGGAAGA+AGG | - | chr2.2:25534051-25534070 | None:intergenic | 30.0% |
| ! | AGAGATGTATAATGGAAGAA+GGG | - | chr2.2:25534050-25534069 | None:intergenic | 30.0% |
| ! | ATAACCCTCATGATAGTTTT+AGG | - | chr2.2:25533410-25533429 | None:intergenic | 30.0% |
| ! | GATTTAAGGCTTCAAGATTT+AGG | + | chr2.2:25534962-25534981 | MS.gene066206:CDS | 30.0% |
| ! | TGCACATATATTTGGAATCA+TGG | + | chr2.2:25534331-25534350 | MS.gene066206:intron | 30.0% |
| !! | GTTTTGAATCTTTTTGTTGG+GGG | + | chr2.2:25534144-25534163 | MS.gene066206:intron | 30.0% |
| !! | TATGATTAGTACTGGTACTA+TGG | + | chr2.2:25535210-25535229 | MS.gene066206:CDS | 30.0% |
| !!! | TTTGTTTTGGAATGTATGTG+TGG | + | chr2.2:25534177-25534196 | MS.gene066206:intron | 30.0% |
| AAAATGTCCCCTTGAAGTAA+AGG | - | chr2.2:25535100-25535119 | None:intergenic | 35.0% | |
| AACTACGAATTGAAGCTCAA+GGG | + | chr2.2:25534582-25534601 | MS.gene066206:CDS | 35.0% | |
| AGTGATCATTGAATTCCTTG+TGG | - | chr2.2:25533809-25533828 | None:intergenic | 35.0% | |
| ATCAATGAGAACTTAAGCCT+TGG | + | chr2.2:25534869-25534888 | MS.gene066206:CDS | 35.0% | |
| ATGAGTCCTATGATTAGTAC+TGG | + | chr2.2:25535202-25535221 | MS.gene066206:CDS | 35.0% | |
| ATGCATACTCATTCATGTTG+CGG | - | chr2.2:25534020-25534039 | None:intergenic | 35.0% | |
| ATTCTTTCAGCATGAAGAGA+TGG | - | chr2.2:25535184-25535203 | None:intergenic | 35.0% | |
| CACTCCTAAAACTATCATGA+GGG | + | chr2.2:25533403-25533422 | MS.gene066206:CDS | 35.0% | |
| GAGAAGAGAAAGAAAAAAGG+TGG | - | chr2.2:25533307-25533326 | None:intergenic | 35.0% | |
| GATACAAAGCCTTTACTTCA+AGG | + | chr2.2:25535088-25535107 | MS.gene066206:CDS | 35.0% | |
| GCATATATGCATGATGATCT+AGG | - | chr2.2:25534847-25534866 | None:intergenic | 35.0% | |
| GTGATCATTGAATTCCTTGT+GGG | - | chr2.2:25533808-25533827 | None:intergenic | 35.0% | |
| TACAAAGCCTTTACTTCAAG+GGG | + | chr2.2:25535090-25535109 | MS.gene066206:CDS | 35.0% | |
| TCAATTAAGGATGGTATGAG+AGG | + | chr2.2:25533828-25533847 | MS.gene066206:CDS | 35.0% | |
| TGATCATTGAATTCCTTGTG+GGG | - | chr2.2:25533807-25533826 | None:intergenic | 35.0% | |
| TGTAATCAGGATGCAAATTG+AGG | + | chr2.2:25534233-25534252 | MS.gene066206:intron | 35.0% | |
| TTCATAGTTGAAGGCTTCTT+TGG | - | chr2.2:25533133-25533152 | None:intergenic | 35.0% | |
| TTGAAGGTTGAACGAAATCA+CGG | - | chr2.2:25534385-25534404 | None:intergenic | 35.0% | |
| ! | ACTAACCCTTATAGTGGAAA+TGG | + | chr2.2:25534914-25534933 | MS.gene066206:CDS | 35.0% |
| ! | CACTATAAGGGTTAGTGTTA+GGG | - | chr2.2:25534910-25534929 | None:intergenic | 35.0% |
| ! | GTATAATGGAAGAAGGGAAT+TGG | - | chr2.2:25534044-25534063 | None:intergenic | 35.0% |
| ! | GTGACACTTCTTTTCTTTCT+AGG | + | chr2.2:25533850-25533869 | MS.gene066206:intron | 35.0% |
| ! | TTACTTCAAGGGGACATTTT+AGG | + | chr2.2:25535100-25535119 | MS.gene066206:CDS | 35.0% |
| ! | TTTCAAGATCTCGACCTTTT+CGG | + | chr2.2:25534767-25534786 | MS.gene066206:CDS | 35.0% |
| !! | ATCCTTTGAAACCAGTTGTA+CGG | + | chr2.2:25534435-25534454 | MS.gene066206:intron | 35.0% |
| !! | CAAATTGGATTCTCTAAAGC+CGG | - | chr2.2:25534487-25534506 | None:intergenic | 35.0% |
| AAAGCTTATCAGACACTTGC+AGG | + | chr2.2:25534629-25534648 | MS.gene066206:CDS | 40.0% | |
| AAGACTACATGAGCAACTTG+AGG | + | chr2.2:25534263-25534282 | MS.gene066206:CDS | 40.0% | |
| AATCATCTCCTACGATGCAA+AGG | + | chr2.2:25533553-25533572 | MS.gene066206:intron | 40.0% | |
| ACTTAAGCCTTGGCAAGAAA+AGG | + | chr2.2:25534879-25534898 | MS.gene066206:CDS | 40.0% | |
| ACTTGACCTTCAGCAAAACA+TGG | + | chr2.2:25534811-25534830 | MS.gene066206:CDS | 40.0% | |
| ATAGTTGAAGGCTTCTTTGG+AGG | - | chr2.2:25533130-25533149 | None:intergenic | 40.0% | |
| ATGAGGGTTATGGGTGTAAA+GGG | + | chr2.2:25533419-25533438 | MS.gene066206:CDS | 40.0% | |
| ATGGCTCTTGAGATGGTAAA+GGG | - | chr2.2:25533450-25533469 | None:intergenic | 40.0% | |
| CAACTACGAATTGAAGCTCA+AGG | + | chr2.2:25534581-25534600 | MS.gene066206:CDS | 40.0% | |
| CAGCATCAACAAAACGTTCA+TGG | - | chr2.2:25533246-25533265 | None:intergenic | 40.0% | |
| CCACTCCTAAAACTATCATG+AGG | + | chr2.2:25533402-25533421 | MS.gene066206:CDS | 40.0% | |
| CCTAACACTAACCCTTATAG+TGG | + | chr2.2:25534908-25534927 | MS.gene066206:CDS | 40.0% | |
| GAGCTTCAATTCGTAGTTGA+AGG | - | chr2.2:25534580-25534599 | None:intergenic | 40.0% | |
| GGACAACATACTACTGTATC+CGG | - | chr2.2:25533612-25533631 | None:intergenic | 40.0% | |
| GGTGAAAGAATAGTACTGTC+AGG | - | chr2.2:25533286-25533305 | None:intergenic | 40.0% | |
| TAGTTGAAGGCTTCTTTGGA+GGG | - | chr2.2:25533129-25533148 | None:intergenic | 40.0% | |
| TCAAATTGCACCACCATCAT+TGG | + | chr2.2:25535030-25535049 | MS.gene066206:CDS | 40.0% | |
| TCACTTCCTCTATCCAATGA+TGG | - | chr2.2:25535046-25535065 | None:intergenic | 40.0% | |
| TGCTTGGATGATCCTTTCAA+AGG | + | chr2.2:25534998-25535017 | MS.gene066206:CDS | 40.0% | |
| ! | CAACTGGTTTCAAAGGATCT+AGG | - | chr2.2:25534433-25534452 | None:intergenic | 40.0% |
| ! | CCACTATAAGGGTTAGTGTT+AGG | - | chr2.2:25534911-25534930 | None:intergenic | 40.0% |
| ! | TAAGGGTTAGTGTTAGGGTT+AGG | - | chr2.2:25534905-25534924 | None:intergenic | 40.0% |
| !! | AACTTAAAGGGCGTTGTTCT+TGG | + | chr2.2:25534680-25534699 | MS.gene066206:CDS | 40.0% |
| !! | CACACAAGGTTGATGTAATC+AGG | + | chr2.2:25534220-25534239 | MS.gene066206:intron | 40.0% |
| !! | CTTCAGCTTTAGAACTGCAA+CGG | + | chr2.2:25533965-25533984 | MS.gene066206:CDS | 40.0% |
| !! | GGGTGAGGAGAATTTTGTTT+TGG | + | chr2.2:25534164-25534183 | MS.gene066206:intron | 40.0% |
| !!! | CCTCATGATAGTTTTAGGAG+TGG | - | chr2.2:25533405-25533424 | None:intergenic | 40.0% |
| AAAGACCCTCACCAAGAAGA+GGG | + | chr2.2:25535158-25535177 | MS.gene066206:CDS | 45.0% | |
| AATTGACTGCACCGTACAAC+TGG | - | chr2.2:25534449-25534468 | None:intergenic | 45.0% | |
| ACCTCATGGAATGGCTGAAA+TGG | + | chr2.2:25534703-25534722 | MS.gene066206:CDS | 45.0% | |
| ACGGAATACTGCTTCCTCTT+CGG | + | chr2.2:25533984-25534003 | MS.gene066206:CDS | 45.0% | |
| ATGTGTGTTCAAGGTGACTC+AGG | + | chr2.2:25533169-25533188 | MS.gene066206:CDS | 45.0% | |
| CATGAGGGTTATGGGTGTAA+AGG | + | chr2.2:25533418-25533437 | MS.gene066206:CDS | 45.0% | |
| CCTCATGGAATGGCTGAAAT+GGG | + | chr2.2:25534704-25534723 | MS.gene066206:CDS | 45.0% | |
| CTTCCTCTATCCAATGATGG+TGG | - | chr2.2:25535043-25535062 | None:intergenic | 45.0% | |
| GACACTTGCAGGTGAAAACA+TGG | + | chr2.2:25534640-25534659 | MS.gene066206:CDS | 45.0% | |
| GAGTCACCTTGAACACACAT+GGG | - | chr2.2:25533169-25533188 | None:intergenic | 45.0% | |
| GATAGACCCATGTGTGTTCA+AGG | + | chr2.2:25533160-25533179 | MS.gene066206:CDS | 45.0% | |
| GATGGCTCTTGAGATGGTAA+AGG | - | chr2.2:25533451-25533470 | None:intergenic | 45.0% | |
| GTTGATGCTGTTACTCAGCT+TGG | + | chr2.2:25533256-25533275 | MS.gene066206:CDS | 45.0% | |
| TGAGTCACCTTGAACACACA+TGG | - | chr2.2:25533170-25533189 | None:intergenic | 45.0% | |
| TGTTCTTGGACCTCATGGAA+TGG | + | chr2.2:25534694-25534713 | MS.gene066206:CDS | 45.0% | |
| ! | CACCGTACAACTGGTTTCAA+AGG | - | chr2.2:25534440-25534459 | None:intergenic | 45.0% |
| ! | GAATCTTTTTGTTGGGGGTG+AGG | + | chr2.2:25534149-25534168 | MS.gene066206:intron | 45.0% |
| ! | GCTTGTCCATGTTTTGCTGA+AGG | - | chr2.2:25534820-25534839 | None:intergenic | 45.0% |
| ! | TCCAACGAAGACGAGGTTTT+GGG | - | chr2.2:25533213-25533232 | None:intergenic | 45.0% |
| !! | AGTACTGGTACTATGGCACA+AGG | + | chr2.2:25535217-25535236 | MS.gene066206:CDS | 45.0% |
| ACCCAAAACCTCGTCTTCGT+TGG | + | chr2.2:25533209-25533228 | MS.gene066206:CDS | 50.0% | |
| AGGGACAGCTTCATCATGCT+TGG | + | chr2.2:25534982-25535001 | MS.gene066206:CDS | 50.0% | |
| CAAGGTAGAGGCTCACCATT+TGG | + | chr2.2:25535235-25535254 | MS.gene066206:CDS | 50.0% | |
| CCATCTCAAGAGCCATCTTC+AGG | + | chr2.2:25533454-25533473 | MS.gene066206:CDS | 50.0% | |
| CCCATTTCAGCCATTCCATG+AGG | - | chr2.2:25534707-25534726 | None:intergenic | 50.0% | |
| CCTGAAGATGGCTCTTGAGA+TGG | - | chr2.2:25533457-25533476 | None:intergenic | 50.0% | |
| GAAAGACCCTCACCAAGAAG+AGG | + | chr2.2:25535157-25535176 | MS.gene066206:CDS | 50.0% | |
| GATGCTGTTACTCAGCTTGG+AGG | + | chr2.2:25533259-25533278 | MS.gene066206:CDS | 50.0% | |
| GCACCACCATCATTGGATAG+AGG | + | chr2.2:25535037-25535056 | MS.gene066206:CDS | 50.0% | |
| GCTTCCTCTTCGGCTATGAT+TGG | + | chr2.2:25533994-25534013 | MS.gene066206:CDS | 50.0% | |
| GGTACTATGGCACAAGGTAG+AGG | + | chr2.2:25535223-25535242 | MS.gene066206:CDS | 50.0% | |
| TCAACAGTCCAACGAAGACG+AGG | - | chr2.2:25533220-25533239 | None:intergenic | 50.0% | |
| TGAAGAGATGGCCCTCTTCT+TGG | - | chr2.2:25535172-25535191 | None:intergenic | 50.0% | |
| TTGCTGCACCTTTGCATCGT+AGG | - | chr2.2:25533564-25533583 | None:intergenic | 50.0% | |
| ! | CAAGATCTCGACCTTTTCGG+AGG | + | chr2.2:25534770-25534789 | MS.gene066206:CDS | 50.0% |
| ! | GGTTAGGCCTTTTCTTGCCA+AGG | - | chr2.2:25534889-25534908 | None:intergenic | 50.0% |
| ! | GTCCAACGAAGACGAGGTTT+TGG | - | chr2.2:25533214-25533233 | None:intergenic | 50.0% |
| AGATGGCCCTCTTCTTGGTG+AGG | - | chr2.2:25535167-25535186 | None:intergenic | 55.0% | |
| GATGGCCCTCTTCTTGGTGA+GGG | - | chr2.2:25535166-25535185 | None:intergenic | 55.0% | |
| GCTTGGAAAGCAACCCCACA+AGG | + | chr2.2:25533791-25533810 | MS.gene066206:CDS | 55.0% | |
| GGCGTTGTTCTTGGACCTCA+TGG | + | chr2.2:25534689-25534708 | MS.gene066206:CDS | 55.0% | |
| ! | GATCTCGACCTTTTCGGAGG+CGG | + | chr2.2:25534773-25534792 | MS.gene066206:CDS | 55.0% |
| GCGGCCAATCATAGCCGAAG+AGG | - | chr2.2:25534001-25534020 | None:intergenic | 60.0% | |
| TCATCTCTCACGCTGCGCAC+CGG | - | chr2.2:25533658-25533677 | None:intergenic | 60.0% | |
| CACCACCACCGCCTCCGAAA+AGG | - | chr2.2:25534784-25534803 | None:intergenic | 65.0% | |
| ! | CTCGACCTTTTCGGAGGCGG+TGG | + | chr2.2:25534776-25534795 | MS.gene066206:CDS | 65.0% |
| ! | GACCTTTTCGGAGGCGGTGG+TGG | + | chr2.2:25534779-25534798 | MS.gene066206:CDS | 65.0% |
| !! | CTTTTCGGAGGCGGTGGTGG+TGG | + | chr2.2:25534782-25534801 | MS.gene066206:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 25533112 | 25535261 | 25533112 | ID=MS.gene066206 |
| chr2.2 | mRNA | 25533112 | 25535261 | 25533112 | ID=MS.gene066206.t1;Parent=MS.gene066206 |
| chr2.2 | exon | 25533112 | 25533289 | 25533112 | ID=MS.gene066206.t1.exon1;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25533112 | 25533289 | 25533112 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| chr2.2 | exon | 25533399 | 25533475 | 25533399 | ID=MS.gene066206.t1.exon2;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25533399 | 25533475 | 25533399 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| chr2.2 | exon | 25533783 | 25533849 | 25533783 | ID=MS.gene066206.t1.exon3;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25533783 | 25533849 | 25533783 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| chr2.2 | exon | 25533965 | 25534031 | 25533965 | ID=MS.gene066206.t1.exon4;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25533965 | 25534031 | 25533965 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| chr2.2 | exon | 25534242 | 25534284 | 25534242 | ID=MS.gene066206.t1.exon5;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25534242 | 25534284 | 25534242 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| chr2.2 | exon | 25534566 | 25535261 | 25534566 | ID=MS.gene066206.t1.exon6;Parent=MS.gene066206.t1 |
| chr2.2 | CDS | 25534566 | 25535261 | 25534566 | ID=cds.MS.gene066206.t1;Parent=MS.gene066206.t1 |
| Gene Sequence |
| Protein sequence |
