Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32184.t1 | XP_013457105.1 | 93.9 | 360 | 18 | 2 | 1 | 360 | 95 | 450 | 1.50E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32184.t1 | Q38945 | 54.5 | 367 | 148 | 6 | 1 | 360 | 19 | 373 | 5.1e-100 | 365.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32184.t1 | A0A072UP28 | 93.9 | 360 | 18 | 2 | 1 | 360 | 95 | 450 | 1.1e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene32184 | 0.816359 | 5.76E-52 | -1.69E-46 |
| MS.gene04918 | MS.gene32184 | 0.825876 | 3.69E-54 | -1.69E-46 |
| MS.gene04919 | MS.gene32184 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene32184 | 0.830304 | 3.17E-55 | -1.69E-46 |
| MS.gene049254 | MS.gene32184 | 0.86523 | 6.86E-65 | -1.69E-46 |
| MS.gene049283 | MS.gene32184 | 0.829476 | 5.04E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene32184 | 0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene32184 | 0.844681 | 6.50E-59 | -1.69E-46 |
| MS.gene049652 | MS.gene32184 | 0.81089 | 9.21E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene32184 | 0.84523 | 4.62E-59 | -1.69E-46 |
| MS.gene050559 | MS.gene32184 | 0.829797 | 4.21E-55 | -1.69E-46 |
| MS.gene050561 | MS.gene32184 | 0.822911 | 1.84E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene32184 | 0.821806 | 3.32E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene32184 | 0.848385 | 6.34E-60 | -1.69E-46 |
| MS.gene051332 | MS.gene32184 | 0.832983 | 6.92E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene32184 | 0.84156 | 4.41E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene32184 | 0.802904 | 4.49E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene32184 | 0.829965 | 3.83E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene32184 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene32184 | 0.805719 | 1.17E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene32184 | 0.816415 | 5.60E-52 | -1.69E-46 |
| MS.gene052534 | MS.gene32184 | 0.86876 | 5.14E-66 | -1.69E-46 |
| MS.gene052582 | MS.gene32184 | 0.849616 | 2.88E-60 | -1.69E-46 |
| MS.gene052584 | MS.gene32184 | 0.849499 | 3.11E-60 | -1.69E-46 |
| MS.gene05308 | MS.gene32184 | 0.804934 | 1.70E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene32184 | 0.853964 | 1.69E-61 | -1.69E-46 |
| MS.gene053272 | MS.gene32184 | -0.81589 | 7.33E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene32184 | 0.815646 | 8.31E-52 | -1.69E-46 |
| MS.gene054142 | MS.gene32184 | 0.830634 | 2.63E-55 | -1.69E-46 |
| MS.gene054178 | MS.gene32184 | 0.805302 | 1.43E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene32184 | 0.818999 | 1.46E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene32184 | 0.824605 | 7.37E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene32184 | 0.803512 | 3.37E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene32184 | 0.850714 | 1.42E-60 | -1.69E-46 |
| MS.gene054892 | MS.gene32184 | 0.812706 | 3.71E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene32184 | 0.818936 | 1.51E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene32184 | 0.82003 | 8.50E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene32184 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene05539 | MS.gene32184 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene32184 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene32184 | 0.810523 | 1.10E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene32184 | 0.804321 | 2.29E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene32184 | 0.811958 | 5.39E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene32184 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene32184 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene32184 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene32184 | 0.817124 | 3.88E-52 | -1.69E-46 |
| MS.gene05659 | MS.gene32184 | 0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene32184 | 0.823828 | 1.12E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene32184 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene32184 | 0.853479 | 2.33E-61 | -1.69E-46 |
| MS.gene05690 | MS.gene32184 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene32184 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene32184 | 0.83475 | 2.50E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene32184 | 0.844191 | 8.81E-59 | -1.69E-46 |
| MS.gene058279 | MS.gene32184 | 0.802849 | 4.62E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene32184 | 0.822274 | 2.59E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene32184 | 0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene32184 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene05897 | MS.gene32184 | 0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene32184 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene32184 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene32184 | 0.825477 | 4.59E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene32184 | -0.868125 | 8.24E-66 | -1.69E-46 |
| MS.gene059901 | MS.gene32184 | -0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene32184 | 0.805918 | 1.06E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene32184 | 0.806222 | 9.13E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene32184 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene060258 | MS.gene32184 | 0.815243 | 1.02E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene32184 | 0.841972 | 3.44E-58 | -1.69E-46 |
| MS.gene060522 | MS.gene32184 | 0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene060716 | MS.gene32184 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene32184 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene32184 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene32184 | 0.820751 | 5.81E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene32184 | 0.827257 | 1.73E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene32184 | 0.838792 | 2.33E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene32184 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene32184 | 0.841156 | 5.64E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32184.t1 | MTR_4g090525 | 93.889 | 360 | 18 | 2 | 1 | 360 | 95 | 450 | 0.0 | 668 |
| MS.gene32184.t1 | MTR_2g012510 | 73.425 | 365 | 90 | 3 | 1 | 360 | 104 | 466 | 0.0 | 554 |
| MS.gene32184.t1 | MTR_8g464260 | 58.011 | 362 | 148 | 3 | 1 | 360 | 19 | 378 | 1.65e-147 | 422 |
| MS.gene32184.t1 | MTR_4g094672 | 34.797 | 296 | 161 | 7 | 39 | 332 | 1 | 266 | 2.26e-45 | 156 |
| MS.gene32184.t1 | MTR_2g011680 | 29.650 | 371 | 212 | 15 | 2 | 351 | 63 | 405 | 1.66e-26 | 109 |
| MS.gene32184.t1 | MTR_3g109970 | 60.000 | 60 | 23 | 1 | 35 | 93 | 6 | 65 | 9.22e-16 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32184.t1 | AT5G54390 | 55.858 | 367 | 143 | 6 | 1 | 360 | 19 | 373 | 1.64e-131 | 381 |
| MS.gene32184.t1 | AT5G63980 | 38.136 | 354 | 189 | 9 | 5 | 356 | 20 | 345 | 1.48e-66 | 214 |
| MS.gene32184.t1 | AT5G09290 | 35.168 | 327 | 173 | 6 | 1 | 325 | 16 | 305 | 1.89e-57 | 190 |
| MS.gene32184.t1 | AT5G64000 | 36.810 | 326 | 175 | 7 | 1 | 324 | 16 | 312 | 3.40e-57 | 190 |
| MS.gene32184.t1 | AT5G63990 | 32.865 | 356 | 206 | 9 | 1 | 354 | 16 | 340 | 1.10e-52 | 178 |
| MS.gene32184.t1 | AT5G64000 | 36.986 | 292 | 155 | 6 | 33 | 324 | 7 | 269 | 6.83e-52 | 174 |
| MS.gene32184.t1 | AT5G63990 | 30.065 | 306 | 184 | 6 | 1 | 304 | 16 | 293 | 6.30e-41 | 145 |
| MS.gene32184.t1 | AT4G05090 | 29.189 | 370 | 209 | 14 | 2 | 354 | 60 | 393 | 1.51e-24 | 103 |
Find 93 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTATCTGAATGTTTA+AGG | 0.159182 | 4.4:+22965818 | MS.gene32184:CDS |
| GAAGTGGTGGTTGGTGTTCT+AGG | 0.169823 | 4.4:+22966141 | MS.gene32184:CDS |
| TGGCTCATAGTGTTGGTTTC+AGG | 0.179091 | 4.4:+22966460 | MS.gene32184:CDS |
| CTATCTGAAGCACCTTTATT+TGG | 0.179496 | 4.4:+22965943 | MS.gene32184:CDS |
| GGGTTCCTTCCGGAAGATTT+TGG | 0.189270 | 4.4:+22966037 | MS.gene32184:CDS |
| TTGTGTAATTTATGCTAAAA+AGG | 0.228871 | 4.4:+22966269 | MS.gene32184:CDS |
| TGGCCACACAAACTTCTTAT+TGG | 0.235482 | 4.4:-22966331 | None:intergenic |
| AAGTCCTCTTGATGGCAAAA+TGG | 0.254030 | 4.4:+22966065 | MS.gene32184:CDS |
| CTGGTTACAAAGAGAAAATA+TGG | 0.313107 | 4.4:+22973209 | MS.gene32184:CDS |
| AAAGGTTCATCATATTTAGA+AGG | 0.326132 | 4.4:+22973313 | MS.gene32184:CDS |
| ATCATGCTCTTAACTCCTAA+TGG | 0.327765 | 4.4:-22973130 | None:intergenic |
| GGCAAAATGGGATTTGTAAA+TGG | 0.334467 | 4.4:+22966078 | MS.gene32184:CDS |
| GGTGCTTCAGCTCCAAATAA+AGG | 0.342554 | 4.4:-22965955 | None:intergenic |
| TCCTTTCTCATAGGGTAGTT+AGG | 0.348690 | 4.4:-22966168 | None:intergenic |
| CCAAGCCAGTCCTTTCTCAT+AGG | 0.354628 | 4.4:-22966177 | None:intergenic |
| GAAGTTCCAAGAGGTGATTT+TGG | 0.359062 | 4.4:-22965976 | None:intergenic |
| GTTATCAGCAAAGTTATCAT+AGG | 0.362327 | 4.4:+22966199 | MS.gene32184:CDS |
| CTTGGATGACTTGGAAATCA+AGG | 0.362527 | 4.4:-22964664 | None:intergenic |
| GATATTATCTGAATGTTTAA+GGG | 0.393568 | 4.4:+22965819 | MS.gene32184:CDS |
| TGGGCACTAAGTCCTCTTGA+TGG | 0.407243 | 4.4:+22966057 | MS.gene32184:CDS |
| AATTAGCCTTCTCAACTGTT+TGG | 0.413234 | 4.4:-22966413 | None:intergenic |
| AGTTCCTTGGATTTCTCTAA+AGG | 0.418901 | 4.4:+22973295 | MS.gene32184:CDS |
| AACTCAGTTGGGGTTCCTTC+CGG | 0.426119 | 4.4:+22966027 | MS.gene32184:CDS |
| AGTCCTCTTGATGGCAAAAT+GGG | 0.427961 | 4.4:+22966066 | MS.gene32184:CDS |
| AGATGCTAGGGGCAGTTCCT+TGG | 0.429138 | 4.4:+22973282 | MS.gene32184:CDS |
| ATTGCAATCCTTGGATGACT+TGG | 0.429607 | 4.4:-22964673 | None:intergenic |
| TTAGTCACTTCAACTCAGTT+GGG | 0.432117 | 4.4:+22966016 | MS.gene32184:CDS |
| TTCCTCCAACATCTGAAACT+TGG | 0.438895 | 4.4:+22966238 | MS.gene32184:CDS |
| AGATGCTGTTGATGCTAGTT+GGG | 0.440882 | 4.4:+22973390 | MS.gene32184:CDS |
| GTATGCAGCAATAAACCATT+AGG | 0.441863 | 4.4:+22973115 | MS.gene32184:intron |
| CAAACTTCTTATTGGCATGA+TGG | 0.448268 | 4.4:-22966323 | None:intergenic |
| ACTTAGTGCCCAAAATCTTC+CGG | 0.450046 | 4.4:-22966046 | None:intergenic |
| AAGTGGTGGTTGGTGTTCTA+GGG | 0.454445 | 4.4:+22966142 | MS.gene32184:CDS |
| GACTGAAGAATTGCAATCCT+TGG | 0.459995 | 4.4:-22964682 | None:intergenic |
| GGCACAAAGTGGCCAATCCT+AGG | 0.464271 | 4.4:-22966392 | None:intergenic |
| ATTAGTCACTTCAACTCAGT+TGG | 0.470594 | 4.4:+22966015 | MS.gene32184:CDS |
| TTTATGAAGTTTGCAAGGAC+TGG | 0.487950 | 4.4:+22973190 | MS.gene32184:CDS |
| AATTCTTCAGTCACAGTGGC+AGG | 0.491383 | 4.4:+22964693 | MS.gene32184:CDS |
| GAAGCACCAAAATCACCTCT+TGG | 0.492396 | 4.4:+22965970 | MS.gene32184:CDS |
| TTGTTCCAAGTTTCAGATGT+TGG | 0.495725 | 4.4:-22966243 | None:intergenic |
| TTCTGTTGACAACCTAGGAT+TGG | 0.496418 | 4.4:+22966380 | MS.gene32184:CDS |
| CGTGGTATAGTTGCTTGTGC+TGG | 0.511205 | 4.4:+22973343 | MS.gene32184:CDS |
| TAGATGCTGTTGATGCTAGT+TGG | 0.511648 | 4.4:+22973389 | MS.gene32184:CDS |
| AAGGTTCATCATATTTAGAA+GGG | 0.514547 | 4.4:+22973314 | MS.gene32184:CDS |
| AAAAGGATAGTGGCAAGGCT+TGG | 0.519825 | 4.4:+22966286 | MS.gene32184:CDS |
| CTTGATTTCCAAGTCATCCA+AGG | 0.520875 | 4.4:+22964665 | MS.gene32184:CDS |
| CAAGCCAGTCCTTTCTCATA+GGG | 0.529436 | 4.4:-22966176 | None:intergenic |
| AGGCACAGTAACAGATGCTA+GGG | 0.531099 | 4.4:+22973270 | MS.gene32184:CDS |
| TTCATCATCATACAAGAGGC+AGG | 0.536972 | 4.4:+22973247 | MS.gene32184:CDS |
| CAGTTCAGATGCATTAGTGT+TGG | 0.540345 | 4.4:-22965887 | None:intergenic |
| TCCTAACTACCCTATGAGAA+AGG | 0.540601 | 4.4:+22966167 | MS.gene32184:CDS |
| CTGTCTTCTGTTGACAACCT+AGG | 0.542023 | 4.4:+22966375 | MS.gene32184:CDS |
| TATCTCTATTCTAGCTGAAG+AGG | 0.543770 | 4.4:+22965849 | MS.gene32184:CDS |
| GAGGCACAGTAACAGATGCT+AGG | 0.548507 | 4.4:+22973269 | MS.gene32184:CDS |
| AGATGTTGGAGGAATCAACT+TGG | 0.552028 | 4.4:-22966229 | None:intergenic |
| GATGGACTGGCTCATAGTGT+TGG | 0.557460 | 4.4:+22966453 | MS.gene32184:CDS |
| AAAATATGGGATCATGCTGC+TGG | 0.560447 | 4.4:+22973223 | MS.gene32184:CDS |
| CTCAACTGTTTGGCACAAAG+TGG | 0.566181 | 4.4:-22966403 | None:intergenic |
| GCTTTATCACTCATAGAGGA+TGG | 0.566527 | 4.4:+22966117 | MS.gene32184:CDS |
| AATATGTGGCACTAGCTTGT+GGG | 0.570610 | 4.4:+22973155 | MS.gene32184:CDS |
| AGGTGTTTATGAAGTTTGCA+AGG | 0.573732 | 4.4:+22973185 | MS.gene32184:CDS |
| TGGCATGATGGATCAGTGGT+TGG | 0.576849 | 4.4:-22966311 | None:intergenic |
| ATCACCTCTTGGAACTTCAG+AGG | 0.579400 | 4.4:+22965981 | MS.gene32184:CDS |
| ACTAGCTTGTGGGGATGCTG+AGG | 0.579924 | 4.4:+22973165 | MS.gene32184:CDS |
| TTATTGGCATGATGGATCAG+TGG | 0.580390 | 4.4:-22966315 | None:intergenic |
| ATATTATCTGAATGTTTAAG+GGG | 0.582727 | 4.4:+22965820 | MS.gene32184:CDS |
| TAAGAGCATGATGAAATATG+TGG | 0.583970 | 4.4:+22973141 | MS.gene32184:CDS |
| TTCCAAGTTTCAGATGTTGG+AGG | 0.584571 | 4.4:-22966240 | None:intergenic |
| TTTGTGCCAAACAGTTGAGA+AGG | 0.587281 | 4.4:+22966407 | MS.gene32184:CDS |
| TAGTCACTTCAACTCAGTTG+GGG | 0.588518 | 4.4:+22966017 | MS.gene32184:CDS |
| TGGTTACAAAGAGAAAATAT+GGG | 0.593622 | 4.4:+22973210 | MS.gene32184:CDS |
| GTTAGCTCAAAGGCTAGAAG+AGG | 0.593814 | 4.4:-22973413 | None:intergenic |
| GTGTCAAAGCAATTGTGAGC+TGG | 0.594825 | 4.4:+22965797 | MS.gene32184:CDS |
| AAATATGTGGCACTAGCTTG+TGG | 0.599637 | 4.4:+22973154 | MS.gene32184:CDS |
| ACATCTGAAACTTGGAACAA+AGG | 0.601359 | 4.4:+22966246 | MS.gene32184:CDS |
| CTCTATTCTAGCTGAAGAGG+AGG | 0.606843 | 4.4:+22965852 | MS.gene32184:CDS |
| ACTCATAGAGGATGGAGAAG+TGG | 0.616161 | 4.4:+22966125 | MS.gene32184:CDS |
| GAGGATGGAGAAGTGGTGGT+TGG | 0.616166 | 4.4:+22966132 | MS.gene32184:CDS |
| TGTAGCTTTATCACTCATAG+AGG | 0.619534 | 4.4:+22966113 | MS.gene32184:CDS |
| CATAGAGGATGGAGAAGTGG+TGG | 0.626150 | 4.4:+22966128 | MS.gene32184:CDS |
| CCAGTCCATCAGTAAAAGAG+TGG | 0.631468 | 4.4:-22966440 | None:intergenic |
| CCTATGAGAAAGGACTGGCT+TGG | 0.633960 | 4.4:+22966177 | MS.gene32184:CDS |
| TGGTTTCATCATCATACAAG+AGG | 0.641288 | 4.4:+22973243 | MS.gene32184:CDS |
| TATTTAGAAGGGATTGATCG+TGG | 0.644276 | 4.4:+22973325 | MS.gene32184:CDS |
| AGTGCCCAAAATCTTCCGGA+AGG | 0.664161 | 4.4:-22966042 | None:intergenic |
| ACTACCCTATGAGAAAGGAC+TGG | 0.670981 | 4.4:+22966172 | MS.gene32184:CDS |
| ATATGTGGCACTAGCTTGTG+GGG | 0.671425 | 4.4:+22973156 | MS.gene32184:CDS |
| TGAACCTTTAGAGAAATCCA+AGG | 0.676390 | 4.4:-22973299 | None:intergenic |
| ATGCCAATAAGAAGTTTGTG+TGG | 0.676415 | 4.4:+22966328 | MS.gene32184:CDS |
| AGAACCTCTGAAGTTCCAAG+AGG | 0.703572 | 4.4:-22965985 | None:intergenic |
| GGCACAGTAACAGATGCTAG+GGG | 0.716087 | 4.4:+22973271 | MS.gene32184:CDS |
| TTGCAATTCTTCAGTCACAG+TGG | 0.721000 | 4.4:+22964689 | MS.gene32184:CDS |
| ATCATCATACAAGAGGCAGG+AGG | 0.725638 | 4.4:+22973250 | MS.gene32184:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22964630 | 22973429 | 22964630 | ID=MS.gene32184 |
| chr4.4 | mRNA | 22964630 | 22973429 | 22964630 | ID=MS.gene32184.t1;Parent=MS.gene32184 |
| chr4.4 | exon | 22964630 | 22964714 | 22964630 | ID=MS.gene32184.t1.exon1;Parent=MS.gene32184.t1 |
| chr4.4 | CDS | 22964630 | 22964714 | 22964630 | ID=cds.MS.gene32184.t1;Parent=MS.gene32184.t1 |
| chr4.4 | exon | 22965791 | 22966481 | 22965791 | ID=MS.gene32184.t1.exon2;Parent=MS.gene32184.t1 |
| chr4.4 | CDS | 22965791 | 22966481 | 22965791 | ID=cds.MS.gene32184.t1;Parent=MS.gene32184.t1 |
| chr4.4 | exon | 22973123 | 22973429 | 22973123 | ID=MS.gene32184.t1.exon3;Parent=MS.gene32184.t1 |
| chr4.4 | CDS | 22973123 | 22973429 | 22973123 | ID=cds.MS.gene32184.t1;Parent=MS.gene32184.t1 |
| Gene Sequence |
| Protein sequence |
